View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1894_low_30 (Length: 330)
Name: NF1894_low_30
Description: NF1894
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1894_low_30 |
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Alignment Details
Target: chr7 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 20 - 318
Target Start/End: Original strand, 4018923 - 4019217
Alignment:
| Q |
20 |
acctgaaaacccaaactcttacaccatgagctatcaactctctatatagtggaagaacagatacatctgtatcattccagtttctattcaaaacttcact |
119 |
Q |
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| T |
4018923 |
acctgaaaacccaaactcttacaccatgagctatcaactctctatatagtggaagaacagatacatctgtatcattccagtttctattcaaaacttcact |
4019022 |
T |
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| Q |
120 |
gcatcaaatgaaaagaaacttatgattaattaattattaaccaatctttaaattgtacaataaataatcactcatataacttgaatatatgtgtcatgaa |
219 |
Q |
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| T |
4019023 |
gcatcaaatgaaaagaaacttatgatta----attattaaccaatctttaaattgtacaataaataatcactcatataacttgaatatatgtgtcatgaa |
4019118 |
T |
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| Q |
220 |
aagttcacctgcaagcagtccacttataaggaatgcctgttgtgtttgcatgaagtgctttttgaacatctggcctattgtagtaaacttctgcatatt |
318 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4019119 |
aagttcacctgcaagcagtccacttataaggaatgcctgttgtgtttgcatgaagtgctttttgaacatctggcctattgtagtaaacttctgcatatt |
4019217 |
T |
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