View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18950_high_26 (Length: 256)
Name: NF18950_high_26
Description: NF18950
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18950_high_26 |
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Alignment Details
Target: chr8 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 37498725 - 37498475
Alignment:
| Q |
1 |
tgttttcctattcgagtaaattttcttattcaagtaccttacaacaaggtgttttgaagataacagcctgatatctccaggaaagaggtcgccaggttca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37498725 |
tgttttcctattcgagtaaattttcttattcaagtaccttacaacaaggtgttttgaagataacagcctgatatctccaggaaagaggtcgccaggttca |
37498626 |
T |
|
| Q |
101 |
aaaatcacaatatcacctggaactacatccatgtgatcaacttgaactatcaattctttctgttcaattctaccagcacatctttgaacttttataggac |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37498625 |
aaaatcacaatatcacctggaactacatccatgtgatcaacttgaactatcaattctttctgttcaattctaccagcacatctttgaacttttataggac |
37498526 |
T |
|
| Q |
201 |
accttaaaaattctgaaagtttcattgcggcttttgagcttctgtgctcct |
251 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||| |||| |
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| T |
37498525 |
accttaaaaattctgaaagtttcatcgcggcttttgagcttctgtgttcct |
37498475 |
T |
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