View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18951_low_1 (Length: 511)
Name: NF18951_low_1
Description: NF18951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18951_low_1 |
 | |
|
Alignment Details
Target: chr6 (Bit Score: 444; Significance: 0; HSPs: 24)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 444; E-Value: 0
Query Start/End: Original strand, 10 - 492
Target Start/End: Original strand, 22899831 - 22900316
Alignment:
| Q |
10 |
attattctaatacagttgaaacatagcacactaaatgaggcaaatagtgaggtggaaattcgattcttctaatttcaaacaaagacacagaagagaagaa |
109 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |
|
|
| T |
22899831 |
attattctaatacagttgaaacatagcacactaaatgaggcaaatagtgaggtggaaattcgatccttctaatttcaaacaaagacacaaaagagaagaa |
22899930 |
T |
|
| Q |
110 |
aacatatcggtataaaattttaattccttgtgtgcaatctctttcatatattatgaactggtgataacttttaccttatgacattggatgtggtctctca |
209 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
22899931 |
aacatatcggtataaaattttaattccttttgtgcaatctctttcatatattatgaagtggtgataacttttaccttatgacattggatgtgttctctca |
22900030 |
T |
|
| Q |
210 |
accacttcataaaatggagcatat---gattctatttctaaaagctgaacatgaaaaataataaagaaagaatattaatggaaaaacttatttcaagact |
306 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
22900031 |
accacttcataaaatggagcatattatgattctatttctaaaagctgaacatgaaaaataataaagaaagaatcttaatggaaaaacttatttcaagact |
22900130 |
T |
|
| Q |
307 |
atatatgatactagctccttcaagcatatgccattgttcttaaaaaaggagaattagtagcattcaagagaagtatatccaaagcataaaacccttgaga |
406 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22900131 |
atatatgatactagctccttcaagcatatgccattgttcttaaaaaaggagaattagtagcattcaagagaagtatatccaaagcataaaacccttgaga |
22900230 |
T |
|
| Q |
407 |
attagcctatataacttgttgggggtgtcatttgatacttagcaaactagacacattaaagtaagcaaatcagtcatagggcatgt |
492 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22900231 |
attagcctatataacttgttgggagtgtcatttgatacttagcaaactagacacattaaagtaagcaaatcagtcatagggcatgt |
22900316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 432; E-Value: 0
Query Start/End: Original strand, 10 - 492
Target Start/End: Original strand, 22881896 - 22882381
Alignment:
| Q |
10 |
attattctaatacagttgaaacatagcacactaaatgaggcaaatagtgaggtggaaattcgattcttctaatttcaaacaaagacacagaagagaagaa |
109 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |
|
|
| T |
22881896 |
attattctaatacagttgaaacatagcacactaaatgaggcaaatagtgaggtggaaattcgatccttctaatttcaaacaaagacacaaaagagaagaa |
22881995 |
T |
|
| Q |
110 |
aacatatcggtataaaattttaattccttgtgtgcaatctctttcatatattatgaactggtgataacttttaccttatgacattggatgtggtctctca |
209 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
22881996 |
aacatatcagtataaaattttaattccttttgtgcaatctcattcatatattatgaagtggtgataacttttaccttatgacattggatgtgttctctca |
22882095 |
T |
|
| Q |
210 |
accacttcataaaatggagcatat---gattctatttctaaaagctgaacatgaaaaataataaagaaagaatattaatggaaaaacttatttcaagact |
306 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
22882096 |
accactgcataaaatggagcatattatgattctatttctaaaagctgaacatgaaaaataataaagaaagaatcttaatggaaaaacttatttcaagact |
22882195 |
T |
|
| Q |
307 |
atatatgatactagctccttcaagcatatgccattgttcttaaaaaaggagaattagtagcattcaagagaagtatatccaaagcataaaacccttgaga |
406 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22882196 |
atatatgatactagctccttcaagcatatgccattgttcttaaaaaaggagaattagtagcattcaagagaagtatatccaaagcataaaacccttgaga |
22882295 |
T |
|
| Q |
407 |
attagcctatataacttgttgggggtgtcatttgatacttagcaaactagacacattaaagtaagcaaatcagtcatagggcatgt |
492 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22882296 |
attagcctatataacttgttgggagtgtcatttgatacttagcaaactagacacattaaagtaagcaaatcagtcatagggcatgt |
22882381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 420; E-Value: 0
Query Start/End: Original strand, 14 - 492
Target Start/End: Original strand, 22914828 - 22915309
Alignment:
| Q |
14 |
ttctaatacagttgaaacatagcacactaaatgaggcaaatagtgaggtggaaattcgattcttctaatttcaaacaaagacacagaagagaagaaaaca |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||| |
|
|
| T |
22914828 |
ttctaatacagttgaaacatagcacactaaatgaggcaaacagtgaggtggaaatttgattcttctaatttcaaacaaagacacaaatgagaagaaaaca |
22914927 |
T |
|
| Q |
114 |
tatcggtataaaattttaattccttgtgtgcaatctctttcatatattatgaactggtgataacttttaccttatgacattggatgtggtctctcaacca |
213 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
22914928 |
tatcggtatcaaattttaattccttgtgtgcaatctctttcatatattatgaagtggtgataaattttaccttatgacattggatgtggtctctcaacca |
22915027 |
T |
|
| Q |
214 |
cttcataaaatggagcatat---gattctatttctaaaagctgaacatgaaaaataataaagaaagaatattaatggaaaaacttatttcaagactatat |
310 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
22915028 |
cttcataaaatggagcatattatgattctatttctaaaagctgaacatgaaaaataataaagaaagaatcttaatggaaaaacttatttcaagactatat |
22915127 |
T |
|
| Q |
311 |
atgatactagctccttcaagcatatgccattgttcttaaaaaaggagaattagtagcattcaagagaagtatatccaaagcataaaacccttgagaatta |
410 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
22915128 |
atgatactagttccttcaagcatatgccattgttcttaaaaaaggagaagtagtagcattcaagagaagtatatcctaagcataaaacccttgagaatta |
22915227 |
T |
|
| Q |
411 |
gcctatataacttgttgggggtgtcatttgatacttagcaaactagacacattaaagtaagcaaatcagtcatagggcatgt |
492 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22915228 |
gcctatataacttgttgggagtgtcatttgatacttagcaaactagacacattaaagtaagcaaatcagtcatagggcatgt |
22915309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 140 - 464
Target Start/End: Complemental strand, 22966615 - 22966289
Alignment:
| Q |
140 |
tgtgcaatctctttcatatattatgaactggtgataacttttaccttatgacattggatgtggtctctcaaccacttcataaaatggagcatat---gat |
236 |
Q |
| |
|
||||||||||||||||||| |||||| ||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||| |
|
|
| T |
22966615 |
tgtgcaatctctttcatat--tatgaagtggtgatgacttttaacttatgacattggatgtggtctctcaacagcttcataaaatggagcatattgtgat |
22966518 |
T |
|
| Q |
237 |
tctatttctaaaagctgaacatgaaaaataataaagaaagaatattaatggaaaaacttatttcaagactatatatgatact-agctccttcaagcatat |
335 |
Q |
| |
|
||||||| |||||||||||||||| ||||||||| ||||||| |||||||||| |||||||||||||| |||||||| | ||||||||||||||||| |
|
|
| T |
22966517 |
tctattttaaaaagctgaacatgaagaataataaaaaaagaatcttaatggaaatttttatttcaagactacatatgatatttagctccttcaagcatat |
22966418 |
T |
|
| Q |
336 |
gccattgttcttaaaaaaggagaattagtagcattcaagagaagtatatccaaagcataaaacccttgagaattagcctatataacttgttgggggtgtc |
435 |
Q |
| |
|
||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
22966417 |
gccattgttctgaaaaaaggggaattagtagcatttaagagaagtatatccaaagcataaaacccttgagaattagcctatataacttgttgggagtgtc |
22966318 |
T |
|
| Q |
436 |
atttgatacttagcaaactagacacatta |
464 |
Q |
| |
|
||| ||||||| ||| |||||||||||| |
|
|
| T |
22966317 |
attcgatacttgacaagctagacacatta |
22966289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 140 - 464
Target Start/End: Original strand, 23821778 - 23822104
Alignment:
| Q |
140 |
tgtgcaatctctttcatatattatgaactggtgataacttttaccttatgacattggatgtggtctctcaaccacttcataaaatggagcatat---gat |
236 |
Q |
| |
|
||||||||||||||||||| |||||| ||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||| |
|
|
| T |
23821778 |
tgtgcaatctctttcatat--tatgaagtggtgatgacttttaacttatgacattggatgtggtctctcaacagcttcataaaatggagcatattgtgat |
23821875 |
T |
|
| Q |
237 |
tctatttctaaaagctgaacatgaaaaataataaagaaagaatattaatggaaaaacttatttcaagactatatatgatact-agctccttcaagcatat |
335 |
Q |
| |
|
||||||| |||||||||||||||| ||||||||| ||||||| |||||||||| |||||||||||||| |||||||| | ||||||||||||||||| |
|
|
| T |
23821876 |
tctattttaaaaagctgaacatgaagaataataaaaaaagaatcttaatggaaatttttatttcaagactacatatgatatttagctccttcaagcatat |
23821975 |
T |
|
| Q |
336 |
gccattgttcttaaaaaaggagaattagtagcattcaagagaagtatatccaaagcataaaacccttgagaattagcctatataacttgttgggggtgtc |
435 |
Q |
| |
|
||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
23821976 |
gccattgttctgaaaaaaggggaattagtagcatttaagagaagtatatccaaagcataaaacccttgagaattagcctatataacttgttgggagtgtc |
23822075 |
T |
|
| Q |
436 |
atttgatacttagcaaactagacacatta |
464 |
Q |
| |
|
||| ||||||| ||| |||||||||||| |
|
|
| T |
23822076 |
attcgatacttgacaagctagacacatta |
23822104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 233 - 461
Target Start/End: Original strand, 22869263 - 22869492
Alignment:
| Q |
233 |
tgattctatttctaaaagctgaacatgaaaaataataaagaaagaatattaatggaaaaacttatttcaagactatatatgatact-agctccttcaagc |
331 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||| | ||||||| ||||||||||| | ||||||||||||| |
|
|
| T |
22869263 |
tgattctatttcaaaaagctgaacatgaaaaataataaagaaaaaatcttaatggaaaataaaaattcaagattatatatgatatttagctccttcaagc |
22869362 |
T |
|
| Q |
332 |
atatgccattgttcttaaaaaaggagaattagtagcattcaagagaagtatatccaaagcataaaacccttgagaattagcctatataacttgttggggg |
431 |
Q |
| |
|
|||| |||||||||| |||||||| ||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |
|
|
| T |
22869363 |
atatcccattgttctgaaaaaaggggaagtagtagcactcaagagaagtatatccaaagcataaaaccctagagaattagcctatataacttgttgggag |
22869462 |
T |
|
| Q |
432 |
tgtcatttgatacttagcaaactagacaca |
461 |
Q |
| |
|
||| | ||||||||| ||||||||||||| |
|
|
| T |
22869463 |
tgtaacttgatacttgccaaactagacaca |
22869492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 157 - 464
Target Start/End: Original strand, 18127056 - 18127371
Alignment:
| Q |
157 |
atattatgaactggtgataacttttaccttatgacattgg-------atgtggtctctcaaccacttcataaaatggagcatat---gattctatttcta |
246 |
Q |
| |
|
|||||||||| |||| || ||||||||||||||||||||| |||||||| |||||| ||||||| ||||||||||||| ||||||||||| | |
|
|
| T |
18127056 |
atattatgaagtggtaatgacttttaccttatgacattggtcattggatgtggtcactcaacaacttcatgaaatggagcatattgtgattctatttcaa |
18127155 |
T |
|
| Q |
247 |
aaagctgaacatgaaaaataataaagaaagaatattaatggaaaaacttatttcaagactatatatgata-ctagctccttcaagcatatgccattgttc |
345 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| ||||||||||| | |||||||| |||||||||| |||||| |||||||||||||||| |||| |
|
|
| T |
18127156 |
aaagctgaacttgaaaaataataaagaaagaatcttaatggaaaataaaaattcaagaccatatatgatatttagctctttcaagcatatgccatcgttc |
18127255 |
T |
|
| Q |
346 |
ttaaaaaaggagaattagtagcattcaagagaagtatatccaaagcataaaacccttgagaattagcctatataacttgttgggggtgtcatttgatact |
445 |
Q |
| |
|
| |||||||| | |||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||| | |||| ||| ||||| |
|
|
| T |
18127256 |
taaaaaaagggg---cagtagcattcaagagaagtatatccaaagcattaaaccctcgagaattagcttatataacttgttgagagtgttattcaatact |
18127352 |
T |
|
| Q |
446 |
tagcaaactagacacatta |
464 |
Q |
| |
|
| ||||||||||||||||| |
|
|
| T |
18127353 |
tggcaaactagacacatta |
18127371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 157 - 464
Target Start/End: Original strand, 22855366 - 22855681
Alignment:
| Q |
157 |
atattatgaactggtgataacttttaccttatgacattgg-------atgtggtctctcaaccacttcataaaatggagcatat---gattctatttcta |
246 |
Q |
| |
|
|||||||||| |||| || ||||||||||||||||||||| |||||||| |||||| ||||||| ||||||||||||| ||||||||||| | |
|
|
| T |
22855366 |
atattatgaagtggtaatgacttttaccttatgacattggtcattggatgtggtcactcaacaacttcatgaaatggagcatattgtgattctatttcaa |
22855465 |
T |
|
| Q |
247 |
aaagctgaacatgaaaaataataaagaaagaatattaatggaaaaacttatttcaagactatatatgata-ctagctccttcaagcatatgccattgttc |
345 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| ||| ||||||| | |||||||| |||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
22855466 |
aaagctgaacttgaaaaataataaagaaagaatcttattggaaaataaaaattcaagacaatatatgatatttagctctttcaagcatatgccattgttc |
22855565 |
T |
|
| Q |
346 |
ttaaaaaaggagaattagtagcattcaagagaagtatatccaaagcataaaacccttgagaattagcctatataacttgttgggggtgtcatttgatact |
445 |
Q |
| |
|
| |||||||| | |||| |||||||||||||||||||||||| || ||||||| |||||| ||| |||||||||||||| | |||| ||| ||||| |
|
|
| T |
22855566 |
taaaaaaagggg---cagtatcattcaagagaagtatatccaaagaattaaaccctcgagaatcagcttatataacttgttgagagtgttattcaatact |
22855662 |
T |
|
| Q |
446 |
tagcaaactagacacatta |
464 |
Q |
| |
|
| ||||||||||||||||| |
|
|
| T |
22855663 |
tggcaaactagacacatta |
22855681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 256 - 464
Target Start/End: Complemental strand, 22984758 - 22984547
Alignment:
| Q |
256 |
catgaaaaataataaagaaagaatattaat--ggaaaaacttatttcaagactatatatgatact-agctccttcaagcatatgccattgttcttaaaaa |
352 |
Q |
| |
|
||||||| |||||||||||||||| |||| |||||| |||||||||||| ||||||||||| | ||||||||||||||||| |||||||||| ||||| |
|
|
| T |
22984758 |
catgaaatataataaagaaagaatcataatatggaaaaccttatttcaagattatatatgatatttagctccttcaagcatattccattgttctgaaaaa |
22984659 |
T |
|
| Q |
353 |
aggagaattagtagcattcaagagaagtatatccaaagcataaaacccttgagaattagcctatataacttgttgggggtgtcatttgatacttagcaaa |
452 |
Q |
| |
|
||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||| |||| |
|
|
| T |
22984658 |
aggggaagtagtagcattcaagagaagtatatccaaagcataaaacccttgagaatcagcctatatatcttgttgggagtgtcattcgatacttgacaaa |
22984559 |
T |
|
| Q |
453 |
ctagacacatta |
464 |
Q |
| |
|
||| |||||||| |
|
|
| T |
22984558 |
ctaaacacatta |
22984547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 256 - 464
Target Start/End: Original strand, 23803660 - 23803871
Alignment:
| Q |
256 |
catgaaaaataataaagaaagaatattaat--ggaaaaacttatttcaagactatatatgatact-agctccttcaagcatatgccattgttcttaaaaa |
352 |
Q |
| |
|
||||||| |||||||||||||||| |||| |||||| |||||||||||| ||||||||||| | ||||||||||||||||| |||||||||| ||||| |
|
|
| T |
23803660 |
catgaaatataataaagaaagaatcataatatggaaaaccttatttcaagattatatatgatatttagctccttcaagcatattccattgttctgaaaaa |
23803759 |
T |
|
| Q |
353 |
aggagaattagtagcattcaagagaagtatatccaaagcataaaacccttgagaattagcctatataacttgttgggggtgtcatttgatacttagcaaa |
452 |
Q |
| |
|
||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||| |||| |
|
|
| T |
23803760 |
aggggaagtagtagcattcaagagaagtatatccaaagcataaaacccttgagaatcagcctatatatcttgttgggagtgtcattcgatacttgacaaa |
23803859 |
T |
|
| Q |
453 |
ctagacacatta |
464 |
Q |
| |
|
||| |||||||| |
|
|
| T |
23803860 |
ctaaacacatta |
23803871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 22961105 - 22961006
Alignment:
| Q |
14 |
ttctaatacagttgaaacatagcacactaaatgaggcaaatagtgaggtggaaattcgattcttctaatttcaaacaaagacacagaagagaagaaaaca |
113 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
22961105 |
ttctaatacagttgaaacatagtacactaaatgaggcaaacagtgaggtggaaattcgattcttctaatttcaaacaaagacacaaaagagaagaaaaca |
22961006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 23827287 - 23827386
Alignment:
| Q |
14 |
ttctaatacagttgaaacatagcacactaaatgaggcaaatagtgaggtggaaattcgattcttctaatttcaaacaaagacacagaagagaagaaaaca |
113 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
23827287 |
ttctaatacagttgaaacatagtacactaaatgaggcaaacagtgaggtggaaattcgattcttctaatttcaaacaaagacacaaaagagaagaaaaca |
23827386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 23803390 - 23803491
Alignment:
| Q |
14 |
ttctaatacagttgaaacatagcacactaaatgaggcaaatagtgaggtggaaattcgattcttctaatttcaaacaaagacacagaagagaagaaaaca |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||| | | |||||||||||||| |
|
|
| T |
23803390 |
ttctaatacagttgaaacatagcacactaaatgaggcaaacagtgatgtggaaatttgattcttctaatttcaaacaaagatataaaagagaagaaaaca |
23803489 |
T |
|
| Q |
114 |
ta |
115 |
Q |
| |
|
|| |
|
|
| T |
23803490 |
ta |
23803491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 15 - 115
Target Start/End: Complemental strand, 22985027 - 22984927
Alignment:
| Q |
15 |
tctaatacagttgaaacatagcacactaaatgaggcaaatagtgaggtggaaattcgattcttctaatttcaaacaaagacacagaagagaagaaaacat |
114 |
Q |
| |
|
|||| |||||||||||||||| ||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||| | | ||||||||||||||| |
|
|
| T |
22985027 |
tctagtacagttgaaacatagtacactaaatgaggcaaacagtgatgtggaaatttgattcttctaatttcaaacaaagatataaaagagaagaaaacat |
22984928 |
T |
|
| Q |
115 |
a |
115 |
Q |
| |
|
| |
|
|
| T |
22984927 |
a |
22984927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 18126836 - 18126930
Alignment:
| Q |
17 |
taatacagttgaaacatagcacactaaatgaggcaaatagtgaggtggaaattcgattcttctaatttcaaacaaagacacagaagagaagaaaac |
112 |
Q |
| |
|
||||| |||| |||||||||||||| ||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| || |||||||||| |
|
|
| T |
18126836 |
taataaagttcaaacatagcacactgaatgaggcaaatagttaggtggaaatttgattctttcaatttcaaacaaagacaca-aaaagaagaaaac |
18126930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 379 - 464
Target Start/End: Complemental strand, 22960834 - 22960749
Alignment:
| Q |
379 |
gtatatccaaagcataaaacccttgagaattagcctatataacttgttgggggtgtcatttgatacttagcaaactagacacatta |
464 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| || ||||||| |||||| |||| |||| |
|
|
| T |
22960834 |
gtatatccaaagcataaaacccttgagaattagcctatatatcttgttgggagtgtcgttcgatacttgacaaacttgacatatta |
22960749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 379 - 464
Target Start/End: Original strand, 23827558 - 23827643
Alignment:
| Q |
379 |
gtatatccaaagcataaaacccttgagaattagcctatataacttgttgggggtgtcatttgatacttagcaaactagacacatta |
464 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| || ||||||| |||||| |||| |||| |
|
|
| T |
23827558 |
gtatatccaaagcataaaacccttgagaattagcctatatatcttgttgggagtgtcgttcgatacttgacaaacttgacatatta |
23827643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 115
Target Start/End: Complemental strand, 22966831 - 22966728
Alignment:
| Q |
14 |
ttctaatacagttgaaacatagcacactaaatgaggcaaatagtgaggtggaaattc----gattcttctaatttcaaacaaagacacagaagagaagaa |
109 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| ||||||||||| |||||||| || ||||||| |
|
|
| T |
22966831 |
ttctaatacagttgaaacatagcacactaaatgaggcaaacagtgatgtggaaattaaattgattcttttaatttcaaac-aagacaca-aaaagaagaa |
22966734 |
T |
|
| Q |
110 |
aacata |
115 |
Q |
| |
|
|||||| |
|
|
| T |
22966733 |
aacata |
22966728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 23821562 - 23821665
Alignment:
| Q |
14 |
ttctaatacagttgaaacatagcacactaaatgaggcaaatagtgaggtggaaattc----gattcttctaatttcaaacaaagacacagaagagaagaa |
109 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| ||||||||||| |||||||| || ||||||| |
|
|
| T |
23821562 |
ttctaatacagttgaaacatagcacactaaatgaggcaaacagtgatgtggaaattaaattgattcttttaatttcaaac-aagacaca-aaaagaagaa |
23821659 |
T |
|
| Q |
110 |
aacata |
115 |
Q |
| |
|
|||||| |
|
|
| T |
23821660 |
aacata |
23821665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 22869008 - 22869103
Alignment:
| Q |
10 |
attattctaatacagttgaaacatagcacactaaatgaggcaaatagtgaggtggaaattcgattcttctaatttcaaacaaagacacagaagagaa |
106 |
Q |
| |
|
||||||| |||| |||| |||||||| ||||||| ||||| ||| ||||||| ||||||| |||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
22869008 |
attattccaatagagttcaaacatagtacactaa-tgaggtaaacagtgaggcggaaatttgattcttctaatttcaaaaaaagacacaaaagagaa |
22869103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 22855184 - 22855281
Alignment:
| Q |
17 |
taatacagttgaaacatagcacactaaatgaggcaaatagtgaggtggaaattcgattcttctaatttcaaacaaagacacagaagagaagaaaacata |
115 |
Q |
| |
|
||||| |||| |||||||||||||| ||||||| ||| ||| ||||||||||| ||||||| |||||||| |||||||||| || ||||||||||||| |
|
|
| T |
22855184 |
taataaagttcaaacatagcacactgaatgaggaaaacagttaggtggaaatttgattctttcaatttcaagcaaagacaca-aaaagaagaaaacata |
22855281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 376 - 437
Target Start/End: Original strand, 22788160 - 22788220
Alignment:
| Q |
376 |
gaagtatatccaaagcataaaacccttgagaattagcctatataacttgttgggggtgtcat |
437 |
Q |
| |
|
||||||||||||||||||||||||| ||| ||||||||||||||||| ||||| ||||||| |
|
|
| T |
22788160 |
gaagtatatccaaagcataaaaccc-cgagtattagcctatataactttttgggagtgtcat |
22788220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 224
Target Start/End: Complemental strand, 22984819 - 22984751
Alignment:
| Q |
156 |
tatattatgaactggtgataacttttaccttatgacattggatgtggtctctcaaccacttcataaaat |
224 |
Q |
| |
|
||||||||||| || || |||||||| |||| ||||||||||||||| |||||| ||||||| |||| |
|
|
| T |
22984819 |
tatattatgaagtgcatatgacttttactttatcacattggatgtggtcactcaacaacttcatgaaat |
22984751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 224
Target Start/End: Original strand, 23803599 - 23803667
Alignment:
| Q |
156 |
tatattatgaactggtgataacttttaccttatgacattggatgtggtctctcaaccacttcataaaat |
224 |
Q |
| |
|
||||||||||| || || |||||||| |||| ||||||||||||||| |||||| ||||||| |||| |
|
|
| T |
23803599 |
tatattatgaagtgcatatgacttttactttatcacattggatgtggtcactcaacaacttcatgaaat |
23803667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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