View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18952_high_9 (Length: 241)

Name: NF18952_high_9
Description: NF18952
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18952_high_9
NF18952_high_9
[»] chr7 (42 HSPs)
chr7 (36-119)||(42798622-42798705)
chr7 (36-119)||(21172106-21172189)
chr7 (36-119)||(47077952-47078035)
chr7 (37-119)||(42805478-42805560)
chr7 (35-111)||(46354146-46354222)
chr7 (37-119)||(2541118-2541201)
chr7 (37-116)||(35334916-35334995)
chr7 (37-119)||(32758215-32758297)
chr7 (37-119)||(42495934-42496016)
chr7 (37-119)||(47716413-47716495)
chr7 (38-119)||(18326989-18327070)
chr7 (36-119)||(43557425-43557508)
chr7 (37-111)||(48735227-48735302)
chr7 (37-119)||(21447544-21447626)
chr7 (42-118)||(7794606-7794682)
chr7 (35-119)||(22699069-22699153)
chr7 (43-119)||(40463837-40463913)
chr7 (44-119)||(10693170-10693245)
chr7 (41-112)||(14732928-14732999)
chr7 (48-119)||(19426988-19427059)
chr7 (37-116)||(28078233-28078312)
chr7 (37-111)||(7193039-7193113)
chr7 (45-119)||(27629596-27629670)
chr7 (37-119)||(42476827-42476909)
chr7 (38-119)||(5180256-5180337)
chr7 (43-115)||(1424013-1424085)
chr7 (44-111)||(11617695-11617762)
chr7 (37-111)||(12473258-12473332)
chr7 (40-118)||(29140460-29140538)
chr7 (57-111)||(33872016-33872070)
chr7 (37-119)||(2663032-2663112)
chr7 (37-112)||(34626313-34626388)
chr7 (36-109)||(13805056-13805128)
chr7 (74-119)||(38262295-38262340)
chr7 (38-102)||(8149062-8149126)
chr7 (48-112)||(19265781-19265844)
chr7 (65-112)||(42391204-42391251)
chr7 (38-87)||(45019007-45019056)
chr7 (46-119)||(48123583-48123655)
chr7 (45-109)||(5814433-5814497)
chr7 (62-102)||(19266429-19266469)
chr7 (40-115)||(25198679-25198757)
[»] chr3 (32 HSPs)
chr3 (34-119)||(13730703-13730788)
chr3 (37-119)||(52926309-52926391)
chr3 (34-119)||(10870050-10870135)
chr3 (37-119)||(7696984-7697066)
chr3 (37-119)||(8247788-8247870)
chr3 (36-119)||(46421136-46421219)
chr3 (37-119)||(1217066-1217148)
chr3 (41-119)||(22123014-22123092)
chr3 (37-111)||(40272919-40272993)
chr3 (37-119)||(6411920-6412002)
chr3 (37-119)||(16735417-16735499)
chr3 (37-119)||(22609743-22609824)
chr3 (37-102)||(4495780-4495845)
chr3 (38-119)||(29366821-29366902)
chr3 (37-119)||(13628891-13628974)
chr3 (37-119)||(9607179-9607261)
chr3 (37-111)||(5173827-5173902)
chr3 (36-119)||(12914134-12914217)
chr3 (37-119)||(39203492-39203574)
chr3 (38-89)||(25517302-25517353)
chr3 (50-117)||(26869696-26869763)
chr3 (37-112)||(26573104-26573178)
chr3 (37-119)||(45620928-45621009)
chr3 (62-119)||(34420743-34420800)
chr3 (64-112)||(7942993-7943041)
chr3 (37-119)||(12525386-12525465)
chr3 (63-119)||(30928246-30928302)
chr3 (37-76)||(9276250-9276289)
chr3 (40-79)||(23871418-23871457)
chr3 (69-119)||(516417-516467)
chr3 (40-82)||(21874999-21875041)
chr3 (62-112)||(53062039-53062089)
[»] chr8 (36 HSPs)
chr8 (35-119)||(35261631-35261715)
chr8 (35-119)||(12670347-12670431)
chr8 (37-119)||(28817725-28817807)
chr8 (37-119)||(30454194-30454276)
chr8 (37-119)||(36720750-36720832)
chr8 (34-111)||(44530100-44530177)
chr8 (35-119)||(29521784-29521868)
chr8 (36-111)||(7136636-7136711)
chr8 (37-119)||(20869595-20869677)
chr8 (37-119)||(39461095-39461177)
chr8 (46-119)||(28407379-28407452)
chr8 (37-119)||(2626473-2626555)
chr8 (37-119)||(13160656-13160738)
chr8 (37-119)||(17823530-17823612)
chr8 (36-110)||(24245404-24245478)
chr8 (35-119)||(20284172-20284256)
chr8 (35-119)||(21070801-21070885)
chr8 (37-119)||(6760777-6760858)
chr8 (37-119)||(18164858-18164940)
chr8 (34-119)||(45071216-45071301)
chr8 (155-226)||(4886207-4886278)
chr8 (41-112)||(25250480-25250551)
chr8 (36-119)||(26954085-26954168)
chr8 (38-118)||(11748254-11748334)
chr8 (157-213)||(10451266-10451322)
chr8 (157-213)||(10455692-10455748)
chr8 (37-111)||(40605012-40605086)
chr8 (42-111)||(8897871-8897940)
chr8 (46-119)||(14018068-14018140)
chr8 (37-77)||(23286434-23286474)
chr8 (164-210)||(4741649-4741695)
chr8 (46-112)||(42083805-42083870)
chr8 (36-74)||(42840862-42840900)
chr8 (46-119)||(30962872-30962944)
chr8 (46-111)||(44781613-44781677)
chr8 (1-37)||(4886011-4886047)
[»] chr2 (34 HSPs)
chr2 (36-119)||(8455415-8455498)
chr2 (35-119)||(12024017-12024101)
chr2 (37-119)||(14530272-14530354)
chr2 (37-111)||(25079825-25079899)
chr2 (34-119)||(7214485-7214570)
chr2 (39-119)||(11514392-11514472)
chr2 (40-119)||(25249836-25249915)
chr2 (37-112)||(22371011-22371086)
chr2 (37-119)||(17705449-17705531)
chr2 (37-119)||(21779358-21779440)
chr2 (37-119)||(23397720-23397802)
chr2 (38-119)||(10543653-10543734)
chr2 (38-119)||(24200724-24200805)
chr2 (37-112)||(5840982-5841057)
chr2 (37-119)||(9671134-9671217)
chr2 (54-109)||(17667973-17668028)
chr2 (39-118)||(19977814-19977893)
chr2 (32-82)||(39189557-39189607)
chr2 (46-111)||(17380343-17380407)
chr2 (62-111)||(40416978-40417027)
chr2 (39-111)||(17896215-17896287)
chr2 (43-119)||(27573581-27573657)
chr2 (38-88)||(14544018-14544068)
chr2 (49-111)||(39914413-39914475)
chr2 (54-111)||(17623535-17623592)
chr2 (62-111)||(44604833-44604882)
chr2 (47-111)||(24860093-24860157)
chr2 (36-82)||(27466266-27466312)
chr2 (62-119)||(99362-99419)
chr2 (62-111)||(5450264-5450313)
chr2 (74-119)||(14444720-14444765)
chr2 (41-119)||(4852313-4852388)
chr2 (68-112)||(25641487-25641531)
chr2 (37-77)||(26684763-26684803)
[»] chr5 (23 HSPs)
chr5 (37-119)||(35710267-35710349)
chr5 (37-119)||(41014273-41014355)
chr5 (36-111)||(1565384-1565459)
chr5 (37-112)||(24448844-24448919)
chr5 (37-119)||(38879535-38879617)
chr5 (40-119)||(4619205-4619284)
chr5 (37-119)||(37024653-37024735)
chr5 (40-112)||(43334159-43334231)
chr5 (37-111)||(23974735-23974808)
chr5 (36-112)||(8170088-8170164)
chr5 (40-119)||(27328709-27328788)
chr5 (37-111)||(22600408-22600482)
chr5 (40-119)||(22861765-22861844)
chr5 (37-119)||(22187239-22187321)
chr5 (46-111)||(39301087-39301151)
chr5 (36-75)||(19438702-19438741)
chr5 (46-109)||(39079875-39079937)
chr5 (38-82)||(2838733-2838777)
chr5 (37-75)||(41956886-41956924)
chr5 (66-111)||(1405170-1405215)
chr5 (62-111)||(28516541-28516590)
chr5 (42-119)||(31299591-31299668)
chr5 (70-119)||(32703411-32703460)
[»] chr1 (42 HSPs)
chr1 (36-119)||(47214487-47214570)
chr1 (37-119)||(34725195-34725277)
chr1 (36-117)||(20004193-20004274)
chr1 (36-119)||(32632655-32632738)
chr1 (34-112)||(22930173-22930251)
chr1 (37-119)||(27474258-27474340)
chr1 (37-115)||(34714600-34714678)
chr1 (37-119)||(46248052-46248134)
chr1 (37-111)||(46991781-46991855)
chr1 (36-119)||(18944619-18944702)
chr1 (36-119)||(45812634-45812717)
chr1 (37-119)||(14617015-14617097)
chr1 (35-119)||(4430125-4430209)
chr1 (43-119)||(30395827-30395903)
chr1 (40-111)||(25290143-25290214)
chr1 (36-119)||(38478379-38478462)
chr1 (37-119)||(41319905-41319987)
chr1 (46-111)||(22327086-22327150)
chr1 (42-119)||(45402077-45402153)
chr1 (36-119)||(10668196-10668284)
chr1 (40-119)||(23768419-23768498)
chr1 (39-102)||(40424721-40424784)
chr1 (42-115)||(18742063-18742137)
chr1 (37-119)||(27201624-27201706)
chr1 (37-102)||(8197020-8197085)
chr1 (47-119)||(18724644-18724715)
chr1 (37-101)||(19932869-19932933)
chr1 (56-119)||(6925096-6925159)
chr1 (43-112)||(12126941-12127010)
chr1 (47-111)||(20036208-20036271)
chr1 (47-119)||(33222971-33223043)
chr1 (46-112)||(2435893-2435958)
chr1 (43-111)||(9939443-9939512)
chr1 (41-102)||(19414420-19414481)
chr1 (38-111)||(24564322-24564395)
chr1 (62-118)||(52910219-52910275)
chr1 (46-112)||(6983915-6983980)
chr1 (35-77)||(10163734-10163776)
chr1 (41-119)||(18335387-18335465)
chr1 (38-84)||(21723642-21723688)
chr1 (62-111)||(2436000-2436049)
chr1 (62-119)||(35117867-35117924)
[»] chr4 (38 HSPs)
chr4 (37-119)||(5648213-5648295)
chr4 (37-119)||(6430724-6430806)
chr4 (37-119)||(48598922-48599004)
chr4 (36-119)||(11054245-11054328)
chr4 (44-119)||(16408702-16408777)
chr4 (36-119)||(21646917-21647000)
chr4 (37-119)||(5306762-5306844)
chr4 (36-119)||(47528627-47528710)
chr4 (37-111)||(20224938-20225012)
chr4 (36-102)||(23501746-23501812)
chr4 (37-119)||(30639334-30639416)
chr4 (40-119)||(16911519-16911598)
chr4 (37-119)||(55766564-55766647)
chr4 (37-119)||(55830819-55830902)
chr4 (41-119)||(14590795-14590873)
chr4 (35-107)||(13256508-13256580)
chr4 (48-119)||(8473719-8473790)
chr4 (37-111)||(10660358-10660432)
chr4 (37-111)||(10874503-10874577)
chr4 (37-94)||(20405047-20405104)
chr4 (40-119)||(14983791-14983870)
chr4 (40-99)||(17315417-17315476)
chr4 (36-111)||(37494804-37494879)
chr4 (62-112)||(35567149-35567199)
chr4 (62-111)||(487242-487291)
chr4 (42-119)||(30352690-30352767)
chr4 (40-112)||(5313100-5313172)
chr4 (47-119)||(30496419-30496491)
chr4 (56-119)||(40915802-40915865)
chr4 (48-111)||(42164255-42164317)
chr4 (40-77)||(18969698-18969735)
chr4 (46-119)||(54640438-54640510)
chr4 (64-119)||(39077893-39077948)
chr4 (40-119)||(54730206-54730285)
chr4 (49-119)||(49938689-49938759)
chr4 (63-119)||(17043493-17043549)
chr4 (37-89)||(29879626-29879678)
chr4 (56-112)||(44363238-44363294)
[»] chr6 (22 HSPs)
chr6 (37-112)||(1346918-1346993)
chr6 (37-119)||(1354854-1354936)
chr6 (47-119)||(12222016-12222088)
chr6 (37-119)||(14975179-14975261)
chr6 (39-112)||(3815183-3815256)
chr6 (37-119)||(8409197-8409279)
chr6 (37-119)||(29355956-29356039)
chr6 (37-111)||(1941809-1941883)
chr6 (37-119)||(9161077-9161159)
chr6 (34-119)||(20400618-20400703)
chr6 (37-118)||(15866137-15866218)
chr6 (35-119)||(6024185-6024269)
chr6 (36-102)||(33922944-33923010)
chr6 (42-111)||(2166519-2166587)
chr6 (42-111)||(2178152-2178220)
chr6 (36-89)||(24734586-24734639)
chr6 (38-102)||(13905095-13905158)
chr6 (40-119)||(12063424-12063503)
chr6 (53-115)||(8417442-8417504)
chr6 (37-111)||(22967125-22967199)
chr6 (37-111)||(23821194-23821268)
chr6 (62-111)||(2755531-2755580)
[»] scaffold0168 (1 HSPs)
scaffold0168 (37-119)||(30533-30615)
[»] scaffold0024 (1 HSPs)
scaffold0024 (37-111)||(83829-83903)
[»] scaffold0187 (4 HSPs)
scaffold0187 (40-119)||(10147-10226)
scaffold0187 (40-119)||(20475-20554)
scaffold0187 (37-102)||(8899-8964)
scaffold0187 (37-102)||(19227-19292)
[»] scaffold0258 (1 HSPs)
scaffold0258 (34-119)||(13122-13207)
[»] scaffold0005 (1 HSPs)
scaffold0005 (41-119)||(226505-226583)
[»] scaffold0057 (2 HSPs)
scaffold0057 (37-102)||(24883-24948)
scaffold0057 (46-111)||(46794-46859)
[»] scaffold0049 (1 HSPs)
scaffold0049 (42-119)||(58936-59013)
[»] scaffold0223 (1 HSPs)
scaffold0223 (44-119)||(11093-11167)
[»] scaffold0311 (1 HSPs)
scaffold0311 (46-100)||(10773-10827)
[»] scaffold0194 (1 HSPs)
scaffold0194 (38-112)||(24619-24693)
[»] scaffold0036 (1 HSPs)
scaffold0036 (37-119)||(35117-35200)
[»] scaffold0254 (1 HSPs)
scaffold0254 (42-111)||(4117-4185)
[»] scaffold1176 (1 HSPs)
scaffold1176 (45-111)||(1692-1758)
[»] scaffold0116 (1 HSPs)
scaffold0116 (36-111)||(8847-8919)
[»] scaffold0018 (1 HSPs)
scaffold0018 (45-77)||(73002-73034)


Alignment Details
Target: chr7 (Bit Score: 72; Significance: 7e-33; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 42798622 - 42798705
Alignment:
Q  36 agaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  42798622 agaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcttggaaacagtctcttg 42798705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 21172189 - 21172106
Alignment:
Q  36 agaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||| ||||||||| ||||||    
T  21172189 agaggggtaaccttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttg 21172106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 47078035 - 47077952
Alignment:
Q  36 agaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||| |||||| |||||||||||| ||||||||||||||||    
T  47078035 agaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagtctcttg 47077952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 42805478 - 42805560
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||||| |||||| |||||||||||||||| ||||||||||| |||||||||||| ||||||||| ||||||    
T  42805478 gaggggtaaccttggcgtaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttg 42805560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 35 - 111
Target Start/End: Original strand, 46354146 - 46354222
Alignment:
Q  35 tagaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    |||||||||||||||||||||||||| |||||||||||||||| | ||||||||| |||||||||||| ||||||||    
T  46354146 tagaggggtaaccttggcgcaactggtaaagttgttgtcatgtgattggaaggtcacgggttcaagtcctggaaaca 46354222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 2541201 - 2541118
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactgg-aaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||| |||||| |||||||||||| ||||||||| ||||||    
T  2541201 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaaggtcacgggttcaagtcctggaaacagcctcttg 2541118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 35334995 - 35334916
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctc 116  Q
    ||||| |||||||||||||||||| |||||||||||||||| ||||||||||| || ||||||||| |||||||||||||    
T  35334995 gagggataaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgagttcaagtcctggaaacagtctc 35334916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 32758215 - 32758297
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| |||||| | |||||||||| ||||||||| ||||||    
T  32758215 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttg 32758297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 42496016 - 42495934
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||||||||| |||||||||||||| | |||| |||||| |||||||||||| ||||||||| ||||||    
T  42496016 gaggggtaaccttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 42495934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 47716413 - 47716495
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||| ||||||| |||||||||| ||||| ||||||||||| |||||||||||| ||||||||| ||||||    
T  47716413 gaggggtaaccttggcacaactggaaaagttgttgccatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttg 47716495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 38 - 119
Target Start/End: Original strand, 18326989 - 18327070
Alignment:
Q  38 aggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||||||||||| |||||||||||||||| ||| ||||||| ||||||||||||  |||||||| ||||||    
T  18326989 aggggtaaccttggcgcaactggtaaagttgttgtcatgtgacttgaaggtcacgggttcaagtcccggaaacagcctcttg 18327070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 43557425 - 43557508
Alignment:
Q  36 agaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||| ||||||||| |||||||||||||||| |||| ||||||  ||||||||||| ||||||||| ||||||    
T  43557425 agaggggtaaccttgccgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttg 43557508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 37 - 111
Target Start/End: Complemental strand, 48735302 - 48735227
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagt-cttggaaaca 111  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| |||||| ||||||||||| ||||||||||    
T  48735302 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtccttggaaaca 48735227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 21447544 - 21447626
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||||||||  ||| |||||||||||||| ||||||||| ||| ||||||||||| |||||| ||||||    
T  21447544 gaggggtaaccttggcgcaactgataaatttgttgtcatgtaattggaaggtcacggattcaagtcttgaaaacagcctcttg 21447626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 7794682 - 7794606
Alignment:
Q  42 gtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctctt 118  Q
    |||||||| |||||||||| ||||||||||| |||| ||||||||||| |||||||||||| ||||||||| |||||    
T  7794682 gtaaccttagcgcaactggtaaagttgttgttatgtgactggaaggtcacgggttcaagtcctggaaacagcctctt 7794606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 119
Target Start/End: Complemental strand, 22699153 - 22699069
Alignment:
Q  35 tagaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||| ||||||||| |||||||||||||||| |||| |||||   ||||||||||| |||||| |||||||||    
T  22699153 tagaggggtaaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggttatgggttcaagtcctggaaatagtctcttg 22699069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 43 - 119
Target Start/End: Original strand, 40463837 - 40463913
Alignment:
Q  43 taaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||| || |||||||||||||||| |||| |||||| |||||||||||| | ||||||||||||||    
T  40463837 taaccttggcgcaaccggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcatagaaacagtctcttg 40463913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 44 - 119
Target Start/End: Complemental strand, 10693245 - 10693170
Alignment:
Q  44 aaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||| | |||||||||||||||| |||| |||||| |||||||||||| ||||||||| ||||||    
T  10693245 aaccttggcgcaactagtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 10693170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 112
Target Start/End: Complemental strand, 14732999 - 14732928
Alignment:
Q  41 ggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacag 112  Q
    |||||||||||||||||||| |||||||||||||||| |||| || |||  ||||||||||| |||||||||    
T  14732999 ggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaagtcatgggttcaagtcctggaaacag 14732928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 119
Target Start/End: Complemental strand, 19427059 - 19426988
Alignment:
Q  48 ttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||| |||||||||||||||| || | |||||| |||||||||||| ||||||||| ||||||    
T  19427059 ttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttg 19426988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 28078312 - 28078233
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctc 116  Q
    ||||||||||| |||||||||| |  ||||||||||||||| |||| |||||| |||||||||||| | |||||||||||    
T  28078312 gaggggtaaccctggcgcaactcgtgaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagtctc 28078233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 111
Target Start/End: Original strand, 7193039 - 7193113
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    ||||||||||||||||| |||| | |||||||||||||||| |||| |||||| |||||||||||| | ||||||    
T  7193039 gaggggtaaccttggcgtaacttgtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctcgaaaca 7193113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 119
Target Start/End: Original strand, 27629596 - 27629670
Alignment:
Q  45 accttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||| |||||||||||||| | || | |||||| |||||||||||| ||||||||| ||||||    
T  27629596 accttggcgcaactggtaaagttgttgtcatttgaccgaaaggtcacgggttcaagtcctggaaacagcctcttg 27629670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 42476827 - 42476909
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||| |||||| |||||| |||||||||||||||| |||  |||||| ||| |||||||  ||||||||||||||||    
T  42476827 gaggggtaacattggcgtaactggtaaagttgttgtcatgtgactaaaaggtcacggattcaagttctggaaacagtctcttg 42476909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 38 - 119
Target Start/End: Complemental strand, 5180337 - 5180256
Alignment:
Q  38 aggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||| ||||||||| |||||||||||||||| |||| ||||||  |||||||| |  ||||||||| ||||||    
T  5180337 aggggtaaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcaagggttcaacttctggaaacagcctcttg 5180256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 115
Target Start/End: Complemental strand, 1424085 - 1424013
Alignment:
Q  43 taaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtct 115  Q
    |||| ||||||||||||| ||||||||||| |||| ||||||||||| ||| ||||| || ||||||||||||    
T  1424085 taactttggcgcaactggtaaagttgttgttatgtgactggaaggtcacggattcaaatcctggaaacagtct 1424013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 11617762 - 11617695
Alignment:
Q  44 aaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    ||||| ||||||||||| |||||||||||||||| |||| |||||| | |||||||||| ||||||||    
T  11617762 aacctcggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaaca 11617695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 111
Target Start/End: Original strand, 12473258 - 12473332
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    |||||||| |||||||||||| || ||||||||||||||||| ||| ||||||  ||||||||||| || |||||    
T  12473258 gaggggtagccttggcgcaaccggtaaagttgttgtcatgtatctgaaaggtcatgggttcaagtcctgcaaaca 12473332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 118
Target Start/End: Complemental strand, 29140538 - 29140460
Alignment:
Q  40 gggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctctt 118  Q
    |||||| |||||||||||||| ||||||||||||||||||||| |||||| |   ||||||| ||| ||||| ||||||    
T  29140538 gggtaatcttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacacattcaagttttgaaaacaatctctt 29140460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 33872070 - 33872016
Alignment:
Q  57 ctggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    |||| |||||||||||||||| |||| ||||||||||||||||||| ||||||||    
T  33872070 ctggtaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaaca 33872016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 2663112 - 2663032
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||||||| | ||||||||||| |||| ||||||  |||   |||||||||| ||||||||| ||||||    
T  2663112 gaggggtaaccttggcgcaactagtaaagttgttgttatgtgactgga--gtcataggttcaagtcctggaaacagcctcttg 2663032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 112
Target Start/End: Complemental strand, 34626388 - 34626313
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacag 112  Q
    ||||||||||||| |||||||||| |||||||||||||||| | || |||| | | | |||||||| |||||||||    
T  34626388 gaggggtaaccttagcgcaactggtaaagttgttgtcatgtgattgaaaggccacagattcaagtcctggaaacag 34626313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 13805056 - 13805128
Alignment:
Q  36 agaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaa 109  Q
    ||||||| | ||||||||||| ||| |||||||||||||||| |||| |||||  |||||||||||| ||||||    
T  13805056 agagggggagccttggcgcaa-tggtaaagttgttgtcatgtgactgaaaggtaacgggttcaagtcctggaaa 13805128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 38262340 - 38262295
Alignment:
Q  74 atgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||| ||||||||||| |||||||||||| ||||||||||||||||    
T  38262340 atgtgactggaaggtcacgggttcaagtcctggaaacagtctcttg 38262295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 8149126 - 8149062
Alignment:
Q  38 aggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtc 102  Q
    ||||||||||||||| ||||||| || ||||||||||||| |||| || ||| || |||||||||    
T  8149126 aggggtaaccttggcacaactggtaatgttgttgtcatgtgactgcaaagtcacgagttcaagtc 8149062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 112
Target Start/End: Original strand, 19265781 - 19265844
Alignment:
Q  48 ttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacag 112  Q
    |||||||||| || ||||||||||||| || |||| |||||| ||||||||||||||||| ||||    
T  19265781 ttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcttggatacag 19265844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 112
Target Start/End: Complemental strand, 42391251 - 42391204
Alignment:
Q  65 gttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacag 112  Q
    ||||||||||||| |||| |||||| |||||||||||| |||||||||    
T  42391251 gttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacag 42391204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 45019056 - 45019007
Alignment:
Q  38 aggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaagg 87  Q
    ||||||||||||||||||||||| |||| |  |||||||| |||||||||    
T  45019056 aggggtaaccttggcgcaactggtaaaggtcctgtcatgtgactggaagg 45019007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 119
Target Start/End: Complemental strand, 48123655 - 48123583
Alignment:
Q  46 ccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||| || ||||||||| ||||||  ||| ||||||  ||||||||||| ||||||||| ||||||    
T  48123655 ccttggcgcaac-ggtaaagttgttatcatgtgtctgaaaggtcatgggttcaagtcctggaaacagcctcttg 48123583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 5814433 - 5814497
Alignment:
Q  45 accttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaa 109  Q
    ||||||||||||  || ||||||||||| |||| | ||||| ||| ||||||||||| |||||||    
T  5814433 accttggcgcaatcggtaaagttgttgttatgtgattggaaagtcacgggttcaagttttggaaa 5814497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 102
Target Start/End: Original strand, 19266429 - 19266469
Alignment:
Q  62 aaagttgttgtcatgtaactggaaggtcgcgggttcaagtc 102  Q
    |||||||||||||||| |||| ||||||| |||||||||||    
T  19266429 aaagttgttgtcatgtgactgaaaggtcgtgggttcaagtc 19266469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 115
Target Start/End: Original strand, 25198679 - 25198757
Alignment:
Q  40 gggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttc---aagtcttggaaacagtct 115  Q
    |||||||||||||| |||||| |||||||||||||| | |||| ||| ||  ||| ||   ||||||||||||||||||    
T  25198679 gggtaaccttggcgtaactggtaaagttgttgtcatatgactgaaagatcatgggatcaaaaagtcttggaaacagtct 25198757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 3e-29; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 34 - 119
Target Start/End: Complemental strand, 13730788 - 13730703
Alignment:
Q  34 atagaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||| ||||||||| ||||||    
T  13730788 atagaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttg 13730703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 52926391 - 52926309
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||| ||||||||| ||||||    
T  52926391 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttg 52926309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 34 - 119
Target Start/End: Complemental strand, 10870135 - 10870050
Alignment:
Q  34 atagaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||| |||||| |||||||||||| ||||||||| ||||||    
T  10870135 atagaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 10870050  T

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Target: chr3; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 7697066 - 7696984
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||||||||| |||||||||||||||| |||  |||||| |||||||||||| ||||||||||||||||    
T  7697066 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagtctcttg 7696984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 8247870 - 8247788
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| |||||| |||||||||||| ||||||||| ||||||    
T  8247870 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 8247788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 46421219 - 46421136
Alignment:
Q  36 agaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||  |||||| |||||||||||| ||||||||| ||||||    
T  46421219 agaggggtaaccttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctggaaacagcctcttg 46421136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 1217066 - 1217148
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||||||||| |||||||| ||||||| |||| |||||| |||||||||||| ||||||||| ||||||    
T  1217066 gaggggtaaccttggcgcaactggtaaagttgtagtcatgtcactgaaaggtcacgggttcaagtcctggaaacagcctcttg 1217148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 22123092 - 22123014
Alignment:
Q  41 ggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||| ||||| ||| |||||||||||| |||| ||||||||||||||||||| ||||||||||||||||    
T  22123092 ggtaaccttggcgccactggtaaatttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacagtctcttg 22123014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 111
Target Start/End: Complemental strand, 40272993 - 40272919
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||  ||||||||||| ||||||||    
T  40272993 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaaca 40272919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 6412002 - 6411920
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||  |||||  |||||||||||||| |||||| ||||||    
T  6412002 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtaactgataggtcatgggttcaagtcttgtaaacagcctcttg 6411920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 16735417 - 16735499
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| || ||| |||||||||||| | ||||||| ||||||    
T  16735417 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcctcgaaacagcctcttg 16735499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 22609743 - 22609824
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||||||||| || |||||||||||||||| |||| |||||  |||||||||||||||||||||| ||||||    
T  22609743 gaggggtaaccttggcgcaac-ggtaaagttgttgtcatgtgactgtaaggtaacgggttcaagtcttggaaacagcctcttg 22609824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 4495845 - 4495780
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtc 102  Q
    ||||||||||||| |||||||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  4495845 gaggggtaaccttcgcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtc 4495780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 38 - 119
Target Start/End: Complemental strand, 29366902 - 29366821
Alignment:
Q  38 aggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||| |||||| |||||||||||||||| |||  |||||| |||||||||||| ||||||||| ||||||    
T  29366902 aggggtaaccttggcgtaactggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagcctcttg 29366821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 13628974 - 13628891
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaa-gttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||| ||||||| ||| ||||||||||||| |||| |||||| |||||||||||| ||||||||| ||||||    
T  13628974 gaggggtaaccttggcacaactggtaaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 13628891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 9607179 - 9607261
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||||||| | |||||||||||||||| |||| ||||||   |||||||||| ||||||||| ||||||    
T  9607179 gaggggtaaccttggcgcaacttgtaaagttgttgtcatgtgactgaaaggtcatcggttcaagtcctggaaacagcctcttg 9607261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 111
Target Start/End: Complemental strand, 5173902 - 5173827
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaa-gttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    |||||||||||||||||||||| | ||| ||||||||||||| |||| |||||| |||||||||||| ||||||||    
T  5173902 gaggggtaaccttggcgcaactcgtaaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 5173827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 12914217 - 12914134
Alignment:
Q  36 agaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||||||||||||| ||||||||||| |||| || | |||||| |  ||||||||| ||||||||| ||||||    
T  12914217 agaggggtaaccttggcgcaactggtaaagttgttgtaatgtgaccgaaaggtcacaagttcaagtcctggaaacagcctcttg 12914134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 39203492 - 39203574
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||| ||||| | |||||||||||||||| |||| |||||| | |||||||||| | ||||||| ||||||    
T  39203492 gaggggtaaccttggcacaacttgtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtccttgaaacagcctcttg 39203574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 89
Target Start/End: Complemental strand, 25517353 - 25517302
Alignment:
Q  38 aggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtc 89  Q
    |||| |||||||||||||||||| |||||||||||||||| |||||||||||    
T  25517353 agggataaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtc 25517302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 26869696 - 26869763
Alignment:
Q  50 ggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctct 117  Q
    ||||||||||| |||||||||||||||| |||| |||||| | |||||||||| ||||||||| ||||    
T  26869696 ggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctct 26869763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 112
Target Start/End: Original strand, 26573104 - 26573178
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacag 112  Q
    |||||| | |||||||||||| || ||||||||||||| || |||| |||||| |||||||||||| |||||||||    
T  26573104 gagggggacccttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacag 26573178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 45621009 - 45620928
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||| | |||||||||||| || ||||||||||||| || |||| |||||| |||||||||||  ||||||||| ||||||    
T  45621009 gagggggagccttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagttctggaaacagcctcttg 45620928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 34420800 - 34420743
Alignment:
Q  62 aaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||| || |||| |||||| |||||||||||| ||||||||| ||||||    
T  34420800 aaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 34420743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 7942993 - 7943041
Alignment:
Q  64 agttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacag 112  Q
    |||||||||||||| ||||||||||| ||| |||||||| |||||||||    
T  7942993 agttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacag 7943041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 12525386 - 12525465
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||||||||| |||   |||||||| | |||| |||||| | ||||| |||| ||||||||| ||||||    
T  12525386 gaggggtaaccttggcgcaactggtaaa---gttgtcatatgactgaaaggtcacaggttcgagtcctggaaacagcctcttg 12525465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 30928302 - 30928246
Alignment:
Q  63 aagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||| ||||||||| |||| |||||| |||||||||||| ||||||||| ||||||    
T  30928302 aagttcttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 30928246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 76
Target Start/End: Original strand, 9276250 - 9276289
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatg 76  Q
    |||||||||||||||||||||| | |||||||||||||||    
T  9276250 gaggggtaaccttggcgcaactagtaaagttgttgtcatg 9276289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 23871418 - 23871457
Alignment:
Q  40 gggtaaccttggcgcaactggcaaagttgttgtcatgtaa 79  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  23871418 gggtaaccttggcgcaactagtaaagttgttgtcatgtaa 23871457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 119
Target Start/End: Original strand, 516417 - 516467
Alignment:
Q  69 ttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||| |||| |||||| |||||||||||| ||||||||| ||||||    
T  516417 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 516467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 82
Target Start/End: Original strand, 21874999 - 21875041
Alignment:
Q  40 gggtaaccttggcgcaactggcaaagttgttgtcatgtaactg 82  Q
    ||||||||||| ||||||||| |||||||||||||||| ||||    
T  21874999 gggtaaccttgacgcaactggtaaagttgttgtcatgtgactg 21875041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 112
Target Start/End: Original strand, 53062039 - 53062089
Alignment:
Q  62 aaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacag 112  Q
    |||||||||||||||| |||| |||||| || ||||||||| |||||||||    
T  53062039 aaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcctggaaacag 53062089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 1e-28; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 35 - 119
Target Start/End: Original strand, 35261631 - 35261715
Alignment:
Q  35 tagaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||| | ||||||||||||||||    
T  35261631 tagaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagccctggaaacagtctcttg 35261715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 35 - 119
Target Start/End: Complemental strand, 12670431 - 12670347
Alignment:
Q  35 tagaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||| |||||| |||||||||||| ||||||||| ||||||    
T  12670431 tagaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 12670347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 28817807 - 28817725
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||| |||||||| |||||||||||||||| ||||||||||| |||||||||||| ||||||||| ||||||    
T  28817807 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttg 28817725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 30454276 - 30454194
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| |||||| |||||||||||| ||||||||| ||||||    
T  30454276 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 30454194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 36720750 - 36720832
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||||| |||||| |||||||||||||||| ||||||||||| |||||||||||| ||||||||| ||||||    
T  36720750 gaggggtaaccttggcgtaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttg 36720832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 111
Target Start/End: Original strand, 44530100 - 44530177
Alignment:
Q  34 atagaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    ||||||||||||||||||||||||||| ||||||| |||||||| ||| ||||||| |||||||||||||||||||||    
T  44530100 atagaggggtaaccttggcgcaactggtaaagttgctgtcatgtgactagaaggtcacgggttcaagtcttggaaaca 44530177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 35 - 119
Target Start/End: Complemental strand, 29521868 - 29521784
Alignment:
Q  35 tagaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||||||||||  |||||||||||| ||| ||||||||||| |||||||||||| ||||||||| ||||||    
T  29521868 tagaggggtaaccttggcgcaactgataaagttgttgtcgtgtgactggaaggtcacgggttcaagtcctggaaacagcctcttg 29521784  T

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Target: chr8; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 36 - 111
Target Start/End: Complemental strand, 7136711 - 7136636
Alignment:
Q  36 agaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||  ||||||||||| ||||||||    
T  7136711 agaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaaca 7136636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 20869677 - 20869595
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||| |||||||||||||||||| |||||||||||||||| |||| |||||| |||||||||||| ||||||||| ||||||    
T  20869677 gagggataaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 20869595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 39461177 - 39461095
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||||||||| |||||||||||||||  |||| |||||| |||||||||||| ||||||||| ||||||    
T  39461177 gaggggtaaccttggcgcaactggtaaagttgttgtcatgagactgaaaggtcacgggttcaagtcctggaaacagcctcttg 39461095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 119
Target Start/End: Original strand, 28407379 - 28407452
Alignment:
Q  46 ccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||| ||||||||| ||||||    
T  28407379 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttg 28407452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 2626473 - 2626555
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||||| ||| |||||||||||||||| || | |||||| |||||||||||| ||||||||| ||||||    
T  2626473 gaggggtaaccttggcgcaattggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttg 2626555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 13160656 - 13160738
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||| ||||||||||| |||||||||||||||| |||| |||||| |||||||||||| | ||||||| ||||||    
T  13160656 gaggggtaacctcggcgcaactggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcttg 13160738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 17823530 - 17823612
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||| |||||||||||||| |||||||||||||||| || | |||||| |||||||||||| ||||||||| ||||||    
T  17823530 gaggggtaatcttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttg 17823612  T

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Target: chr8; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 110
Target Start/End: Original strand, 24245404 - 24245478
Alignment:
Q  36 agaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaac 110  Q
    |||||||||||||||| |||||||| |||||||||||||||| |||| |||||| |||||||||||| |||||||    
T  24245404 agaggggtaaccttggggcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaac 24245478  T

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Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 119
Target Start/End: Complemental strand, 20284256 - 20284172
Alignment:
Q  35 tagaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||| |||||||||| |||||| || |||||||||||||||| |||| |||||| |||||||||||| ||||||||| ||||||    
T  20284256 tagagcggtaaccttgacgcaacgggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 20284172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 119
Target Start/End: Complemental strand, 21070885 - 21070801
Alignment:
Q  35 tagaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||| |||||||||| |||||| || |||||||||||||||| |||| |||||| |||||||||||| ||||||||| ||||||    
T  21070885 tagagcggtaaccttgacgcaacgggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 21070801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 6760777 - 6760858
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||| ||||||||||||| |||||||||||||| | ||| ||||||| |||||||||||| ||||||||| ||||||    
T  6760777 gaggggtaac-ttggcgcaactggtaaagttgttgtcatatgactagaaggtcacgggttcaagtcctggaaacagcctcttg 6760858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 18164940 - 18164858
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||| ||||||||||| ||  ||||||||||||||| |||| |||||| |||||||||||| ||||||||| ||||||    
T  18164940 gaggggtaatcttggcgcaaccggtgaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 18164858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 45071216 - 45071301
Alignment:
Q  34 atagaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||||||||  ||||| |||||||||||||||| | || |||||| |||||||||||  ||||||||| ||||||    
T  45071216 atagaggggtaaccttggcgatactggtaaagttgttgtcatgtgattgtaaggtcacgggttcaagttctggaaacagcctcttg 45071301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 226
Target Start/End: Original strand, 4886207 - 4886278
Alignment:
Q  155 ggacaaagatatccttataaatggtggttatctagctgaaagagtggtttcggatatagaaactaaagaaat 226  Q
    ||||||||| ||| |||||||||||||||||| |||||||||||||||||| |||| || | ||||||||||    
T  4886207 ggacaaagagatcattataaatggtggttatcgagctgaaagagtggtttcagatacagtagctaaagaaat 4886278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 112
Target Start/End: Original strand, 25250480 - 25250551
Alignment:
Q  41 ggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacag 112  Q
    |||||||||||| ||||||| |||||||||||||||| ||||||||||| |  ||||||||| |||||||||    
T  25250480 ggtaaccttggcacaactggtaaagttgttgtcatgtgactggaaggtcacatgttcaagtcctggaaacag 25250551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 26954085 - 26954168
Alignment:
Q  36 agaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||| |||||| || ||| |||||||||||||||| | | ||||||| |||||||||||| ||||||||| ||||||    
T  26954085 agaggggtaactttggcgtaattggtaaagttgttgtcatgtgattagaaggtcacgggttcaagtcctggaaacagcctcttg 26954168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 118
Target Start/End: Original strand, 11748254 - 11748334
Alignment:
Q  38 aggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctctt 118  Q
    ||||||||| |||| ||||||||  || |||||||||||| |||| || ||| |||||||||||||||||||||| |||||    
T  11748254 aggggtaactttggtgcaactggtgaaattgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctctt 11748334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 10451322 - 10451266
Alignment:
Q  157 acaaagatatccttataaatggtggttatctagctgaaagagtggtttcggatatag 213  Q
    ||||| ||||| ||||||||||||||||||||||| ||| ||||||||| |||||||    
T  10451322 acaaaaatatcattataaatggtggttatctagctaaaatagtggtttctgatatag 10451266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 10455748 - 10455692
Alignment:
Q  157 acaaagatatccttataaatggtggttatctagctgaaagagtggtttcggatatag 213  Q
    ||||| ||||| ||||||||||||||||||||||| ||| ||||||||| |||||||    
T  10455748 acaaaaatatcattataaatggtggttatctagctaaaatagtggtttctgatatag 10455692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 37 - 111
Target Start/End: Complemental strand, 40605086 - 40605012
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    |||||||||| ||||||||||||| |||||||||||||||| | |||| | |   ||||||||||| ||||||||    
T  40605086 gaggggtaactttggcgcaactggtaaagttgttgtcatgtgattggatgattatgggttcaagtcatggaaaca 40605012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 8897940 - 8897871
Alignment:
Q  42 gtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    |||||| |||| ||||||| |||||||||||||||| || | |||||| |||||| ||||| ||||||||    
T  8897940 gtaaccctggcacaactggtaaagttgttgtcatgtgacagcaaggtcacgggttgaagtcctggaaaca 8897871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 119
Target Start/End: Complemental strand, 14018140 - 14018068
Alignment:
Q  46 ccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||| || || |||||||||| || | || ||||||  ||||||||||||||||||||||||||||    
T  14018140 ccttggcgcaac-ggtaatgttgttgtcacgtgattgaaaggtcatgggttcaagtcttggaaacagtctcttg 14018068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 23286474 - 23286434
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgt 77  Q
    |||||||||||||| ||||||||| ||||||||||||||||    
T  23286474 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgt 23286434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 210
Target Start/End: Complemental strand, 4741695 - 4741649
Alignment:
Q  164 tatccttataaatggtggttatctagctgaaagagtggtttcggata 210  Q
    |||| |||||||||||||||||||| |||||||| ||||||| ||||    
T  4741695 tatcattataaatggtggttatctacctgaaagactggtttctgata 4741649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 112
Target Start/End: Complemental strand, 42083870 - 42083805
Alignment:
Q  46 ccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacag 112  Q
    |||||||||||| || ||| ||||||||| || |||| |||||| |||||||||||| |||||||||    
T  42083870 ccttggcgcaac-ggtaaaattgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacag 42083805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 42840862 - 42840900
Alignment:
Q  36 agaggggtaaccttggcgcaactggcaaagttgttgtca 74  Q
    ||||||||||||||||||||||| | |||||||||||||    
T  42840862 agaggggtaaccttggcgcaactagtaaagttgttgtca 42840900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 119
Target Start/End: Complemental strand, 30962944 - 30962872
Alignment:
Q  46 ccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||| || |||||||||||||||| | || |||||| ||  |||||||| ||||||||| ||||||    
T  30962944 ccttggcgcaac-ggaaaagttgttgtcatgtgattgaaaggtcacgacttcaagtcctggaaacagcctcttg 30962872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 111
Target Start/End: Complemental strand, 44781677 - 44781613
Alignment:
Q  46 ccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    |||||||||||| || ||||||||||||| || |||| ||| || |||||||||||| ||||||||    
T  44781677 ccttggcgcaac-ggtaaagttgttgtcacgtgactgaaagttcacgggttcaagtcctggaaaca 44781613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 4886011 - 4886047
Alignment:
Q  1 ttatttatttttacatgcacattgttctacctgatag 37  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  4886011 ttatttaattttacatgtacattgttctacctgatag 4886047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 4e-28; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 8455498 - 8455415
Alignment:
Q  36 agaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||| ||||||||| ||||||    
T  8455498 agaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttg 8455415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 35 - 119
Target Start/End: Complemental strand, 12024101 - 12024017
Alignment:
Q  35 tagaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||| |||||| |||||||||||| ||||||||| ||||||    
T  12024101 tagaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 12024017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 14530272 - 14530354
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| |||||| |||||||||||| ||||||||| ||||||    
T  14530272 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 14530354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 37 - 111
Target Start/End: Complemental strand, 25079899 - 25079825
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||| ||||||    
T  25079899 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcttagaaaca 25079825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 7214485 - 7214570
Alignment:
Q  34 atagaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||| ||||| ||||||| |||||||||||||||| |||| ||||||  ||||||||||||||||||||||||||||    
T  7214485 atagaggggtaactttggcacaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcttggaaacagtctcttg 7214570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 39 - 119
Target Start/End: Original strand, 11514392 - 11514472
Alignment:
Q  39 ggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||| || ||||||||| ||||||    
T  11514392 ggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaactcctggaaacagcctcttg 11514472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 40 - 119
Target Start/End: Complemental strand, 25249915 - 25249836
Alignment:
Q  40 gggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||||| ||| |||||||||||||||| |||| |||||| |||||||||||| ||||||||||||||||    
T  25249915 gggtaaccttggcgcaattggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcatggaaacagtctcttg 25249836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 37 - 112
Target Start/End: Original strand, 22371011 - 22371086
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacag 112  Q
    |||||||||||||||| ||||||| |||||||||||||||| ||||| ||||| |||||||||||| |||||||||    
T  22371011 gaggggtaaccttggcccaactggtaaagttgttgtcatgtgactgggaggtcacgggttcaagtcctggaaacag 22371086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 17705449 - 17705531
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||| |||||||| |||||||||||||||| ||| ||||||| |||||||||||| ||||||| | ||||||    
T  17705449 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactagaaggtcacgggttcaagtcctggaaaccgcctcttg 17705531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 21779440 - 21779358
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||| |||||| |||||||||||| |||| |||| ||||||    
T  21779440 gaggggtaaccttggcgcaactggtgaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggagacagcctcttg 21779358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 23397720 - 23397802
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||| |||||||| |||||||||||||||| |||| ||||||  ||||||||||| ||||||||| ||||||    
T  23397720 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttg 23397802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 38 - 119
Target Start/End: Original strand, 10543653 - 10543734
Alignment:
Q  38 aggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||||||||||  |||||||||||||||| |||| |||||| |||||||||||| ||||||| | ||||||    
T  10543653 aggggtaaccttggcgcaactgataaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacggcctcttg 10543734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 38 - 119
Target Start/End: Complemental strand, 24200805 - 24200724
Alignment:
Q  38 aggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||  |||||||| |||||||||||||||| |||| || ||| |||||||||||| ||||||||| ||||||    
T  24200805 aggggtaaccttgatgcaactggtaaagttgttgtcatgtgactgaaaagtcacgggttcaagtcctggaaacagcctcttg 24200724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 112
Target Start/End: Original strand, 5840982 - 5841057
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacag 112  Q
    ||||||||||||||| |||| ||  |||||||||||||||| ||||||||||| |||||||||||| | |||||||    
T  5840982 gaggggtaaccttggtgcaaatgataaagttgttgtcatgtgactggaaggtcacgggttcaagtcctagaaacag 5841057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 9671134 - 9671217
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactgg-aaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||||||||| || |||||||||||||||| ||||| || ||| ||||||||| || ||||||||| ||||||    
T  9671134 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgtgactggaaatgtcacgggttcaaatcctggaaacagcctcttg 9671217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 54 - 109
Target Start/End: Original strand, 17667973 - 17668028
Alignment:
Q  54 caactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaa 109  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||| ||||||    
T  17667973 caactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaa 17668028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 39 - 118
Target Start/End: Complemental strand, 19977893 - 19977814
Alignment:
Q  39 ggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctctt 118  Q
    ||||||||||||||| ||||||  ||||||||||||||| || | |||||| |||||||||||  ||||||||| |||||    
T  19977893 ggggtaaccttggcggaactggtgaagttgttgtcatgtgaccgaaaggtcacgggttcaagttctggaaacagcctctt 19977814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 39189607 - 39189557
Alignment:
Q  32 tgatagaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactg 82  Q
    |||| |||||||||||||||||||||||| |||||||||||||||| ||||    
T  39189607 tgattgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 39189557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 111
Target Start/End: Complemental strand, 17380407 - 17380343
Alignment:
Q  46 ccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    ||||||||||| |||| ||||||||||||||| || | |||||| |||||||||||||||||||||    
T  17380407 ccttggcgcaa-tggcgaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcttggaaaca 17380343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 40417027 - 40416978
Alignment:
Q  62 aaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    |||||||||||||||| ||||||||||| |||||||||||| ||||||||    
T  40417027 aaagttgttgtcatgtgactggaaggtcacgggttcaagtcatggaaaca 40416978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 17896215 - 17896287
Alignment:
Q  39 ggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    |||||||||||| ||||||||| |||||||||||||||| || | |||||| ||| |||||||| | ||||||    
T  17896215 ggggtaaccttgacgcaactggtaaagttgttgtcatgtgaccgaaaggtcacggattcaagtcctagaaaca 17896287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 119
Target Start/End: Original strand, 27573581 - 27573657
Alignment:
Q  43 taaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||| |||||||||||||||| |||| ||||||   ||||||||||  || ||||| ||||||    
T  27573581 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcattggttcaagtccgggcaacagcctcttg 27573657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 14544018 - 14544068
Alignment:
Q  38 aggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggt 88  Q
    ||||||||||||||||||| ||| |||||||||||||||| |||| |||||    
T  14544018 aggggtaaccttggcgcaattggtaaagttgttgtcatgtgactgaaaggt 14544068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 39914475 - 39914413
Alignment:
Q  49 tggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    ||||||| |||| |||||||||||||||| ||||||||||| |||| ||||||  ||||||||    
T  39914475 tggcgcatctggtaaagttgttgtcatgtgactggaaggtcacgggatcaagtactggaaaca 39914413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 111
Target Start/End: Original strand, 17623535 - 17623592
Alignment:
Q  54 caactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    ||||||| |||||||||||||||  ||||||||||| |||||||||||| | ||||||    
T  17623535 caactggtaaagttgttgtcatgcgactggaaggtcacgggttcaagtcctcgaaaca 17623592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 44604833 - 44604882
Alignment:
Q  62 aaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    |||||||||||||||| ||||||||||| | |||||||||| ||||||||    
T  44604833 aaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaaca 44604882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 24860157 - 24860093
Alignment:
Q  47 cttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    |||||||||||||| ||| |||||||||||| ||||||||||  |||||| ||| | ||||||||    
T  24860157 cttggcgcaactggtaaaattgttgtcatgtgactggaaggttacgggtttaagccctggaaaca 24860093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 27466312 - 27466266
Alignment:
Q  36 agaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactg 82  Q
    ||||| ||||| ||||||||||||| |||||||||||||||| ||||    
T  27466312 agaggcgtaacattggcgcaactggtaaagttgttgtcatgtgactg 27466266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 99419 - 99362
Alignment:
Q  62 aaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||| || |||| |||||| |||||||||||| | ||||||| ||||||    
T  99419 aaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttg 99362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 5450264 - 5450313
Alignment:
Q  62 aaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    |||||||||||||||| |||| |||||| ||||||||| || ||||||||    
T  5450264 aaagttgttgtcatgtgactgaaaggtcacgggttcaattcctggaaaca 5450313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 14444720 - 14444765
Alignment:
Q  74 atgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||| ||||||||||| |||||||||||| ||||||||| ||||||    
T  14444720 atgtgactggaaggtcacgggttcaagtcctggaaacagcctcttg 14444765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 4852388 - 4852313
Alignment:
Q  41 ggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||| |||||||||||||||||   ||||| || | || |||  ||||||||||| || |||||||||||||    
T  4852388 ggtaaccttggtgcaactggcaaagttgt---catgtgaccgaaaagtcaggggttcaagtcctgcaaacagtctcttg 4852313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 25641487 - 25641531
Alignment:
Q  68 gttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacag 112  Q
    |||||||||| |||| |||||| |||||||||||| |||||||||    
T  25641487 gttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacag 25641531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 26684803 - 26684763
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgt 77  Q
    |||||||||| || |||||||||| ||||||||||||||||    
T  26684803 gaggggtaactttagcgcaactggtaaagttgttgtcatgt 26684763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 35710267 - 35710349
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||| ||||||||| ||||||    
T  35710267 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttg 35710349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 41014273 - 41014355
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||| ||||||||| ||||||    
T  41014273 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttg 41014355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 36 - 111
Target Start/End: Original strand, 1565384 - 1565459
Alignment:
Q  36 agaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||| ||||||||    
T  1565384 agaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaaca 1565459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 112
Target Start/End: Original strand, 24448844 - 24448919
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacag 112  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||| |||||||||    
T  24448844 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacag 24448919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 38879535 - 38879617
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| |||||| |||||||||||| ||||||||| ||||||    
T  38879535 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 38879617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 40 - 119
Target Start/End: Complemental strand, 4619284 - 4619205
Alignment:
Q  40 gggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||| |||||| || ||||||    
T  4619284 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttg 4619205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 37024735 - 37024653
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||| |||||||| |||||||||||||||| |||| |||||| |||||||||||| ||||||||| ||||||    
T  37024735 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 37024653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 112
Target Start/End: Original strand, 43334159 - 43334231
Alignment:
Q  40 gggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacag 112  Q
    ||||||||||||||||||||| |||||||||||||||| |||| |||||| |||||||||||| |||||||||    
T  43334159 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacag 43334231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 111
Target Start/End: Original strand, 23974735 - 23974808
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    ||||||||||||||||||||| || |||||||||||||||| ||||||||||| |||||||||||| ||||||||    
T  23974735 gaggggtaaccttggcgcaac-ggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaaca 23974808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 8170164 - 8170088
Alignment:
Q  36 agaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacag 112  Q
    |||||| |||||||||||||||||| |||||||||||||||| || | |||||| |||||||||||| |||||||||    
T  8170164 agagggctaaccttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacag 8170088  T

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Target: chr5; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 40 - 119
Target Start/End: Original strand, 27328709 - 27328788
Alignment:
Q  40 gggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||| ||||| ||| |||||||||||||||| |||| |||||| | |||||||||| ||||||||||||||||    
T  27328709 gggtaaccttgacgcaattggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagtctcttg 27328788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 111
Target Start/End: Original strand, 22600408 - 22600482
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    |||||||||||||| || |||||| ||||||||| |||||| ||||||||||  |||||||||||| ||||||||    
T  22600408 gaggggtaaccttgacgtaactggtaaagttgttatcatgtgactggaaggttacgggttcaagtcctggaaaca 22600482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 119
Target Start/End: Complemental strand, 22861844 - 22861765
Alignment:
Q  40 gggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||| ||||||  |||||||||||||||| |||| |||||| ||| |||||||| | ||| ||||||||||    
T  22861844 gggtaaccttggcacaactgataaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaagcagtctcttg 22861765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 22187239 - 22187321
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||| ||||||||||| | |||||||||||||| | |||| |||||| | |||| ||||| ||||||||| ||||||    
T  22187239 gaggggtaactttggcgcaactagtaaagttgttgtcatttgactgaaaggtcaccggtttaagtcctggaaacagcctcttg 22187321  T

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Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 39301087 - 39301151
Alignment:
Q  46 ccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    |||||||||||| || |||||||||||||||| |||| |||||| |||||||||||||||| ||||    
T  39301087 ccttggcgcaac-ggtaaagttgttgtcatgttactgaaaggtcacgggttcaagtcttgggaaca 39301151  T

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Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 75
Target Start/End: Original strand, 19438702 - 19438741
Alignment:
Q  36 agaggggtaaccttggcgcaactggcaaagttgttgtcat 75  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  19438702 agaggggtaaccttggcgcaactggtaaagttgttgtcat 19438741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 109
Target Start/End: Complemental strand, 39079937 - 39079875
Alignment:
Q  46 ccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaa 109  Q
    |||||||||||| || |||||||||||||||| || | |||||| |||||||||||||||||||    
T  39079937 ccttggcgcaac-ggtaaagttgttgtcatgtgacagaaaggtcacgggttcaagtcttggaaa 39079875  T

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Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 2838733 - 2838777
Alignment:
Q  38 aggggtaaccttggcgcaactggcaaagttgttgtcatgtaactg 82  Q
    |||||||||||||||||||| || |||||||||||||||| ||||    
T  2838733 aggggtaaccttggcgcaaccggtaaagttgttgtcatgtgactg 2838777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 75
Target Start/End: Original strand, 41956886 - 41956924
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcat 75  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  41956886 gaggggtaacattggcgcaactggtaaagttgttgtcat 41956924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 1405170 - 1405215
Alignment:
Q  66 ttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    |||||||||||| ||| ||||||| |||||||||||| ||||||||    
T  1405170 ttgttgtcatgtgactagaaggtcacgggttcaagtcctggaaaca 1405215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 28516590 - 28516541
Alignment:
Q  62 aaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    ||||||||||||| ||  ||| |||||| |||||||||||||||||||||    
T  28516590 aaagttgttgtcaggtggctgaaaggtcacgggttcaagtcttggaaaca 28516541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 31299591 - 31299668
Alignment:
Q  42 gtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||| |||||||| |||||||||||||||| |||   ||||| |  ||||||||| | ||||||| ||||||    
T  31299591 gtaaccttggtgcaactggtaaagttgttgtcatgtgacttacaggtcactagttcaagtcctagaaacagcctcttg 31299668  T

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Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 119
Target Start/End: Original strand, 32703411 - 32703460
Alignment:
Q  70 tgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||| |||| |||||| |||||||||||| ||||||||| ||||||    
T  32703411 tgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 32703460  T

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Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 47214487 - 47214570
Alignment:
Q  36 agaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||| ||||||||||||| |||||||||||||||| |||| |||||| |||||||||||| ||||||||||||||||    
T  47214487 agaggggtaactttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagtctcttg 47214570  T

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Target: chr1; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 34725277 - 34725195
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| |||||| |||||||||||| ||||||||| ||||||    
T  34725277 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 34725195  T

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Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 20004274 - 20004193
Alignment:
Q  36 agaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctct 117  Q
    |||||||||||||||| |||||||| |||||||||||||||| ||||||||||| |||||||||||| ||||||||| ||||    
T  20004274 agaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctct 20004193  T

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Target: chr1; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 32632738 - 32632655
Alignment:
Q  36 agaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||||||||||||| |||||||||||||| | |||| |||||| |||||||||||| ||||||||| ||||||    
T  32632738 agaggggtaaccttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 32632655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 112
Target Start/End: Complemental strand, 22930251 - 22930173
Alignment:
Q  34 atagaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacag 112  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||  ||||||||||| |||||||||    
T  22930251 atagaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacag 22930173  T

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Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 27474258 - 27474340
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||| || ||||||| |||||||||||||||| |||| |||||| | |||||||||||||||||||||||||||    
T  27474258 gaggggtaaccttagctcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcttggaaacagtctcttg 27474340  T

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Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 115
Target Start/End: Original strand, 34714600 - 34714678
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtct 115  Q
    |||||||||||||||||||||||| |||||||||||||||| | || |||||| |||||||||||| ||||||||||||    
T  34714600 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgattgaaaggtcacgggttcaagtcatggaaacagtct 34714678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 46248134 - 46248052
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||| || ||| |||||||||||||||||||||| ||||||    
T  46248134 gaggggtaaccttggctcaactggtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttg 46248052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 111
Target Start/End: Original strand, 46991781 - 46991855
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    ||||||||||||||| |||||||| |||||||||||||||| ||||||||||| |||||||||||| ||||||||    
T  46991781 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaaca 46991855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 18944619 - 18944702
Alignment:
Q  36 agaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||| |||||| | |||||||| | ||||||||| ||||||    
T  18944619 agaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaaggcctggaaacagcctcttg 18944702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 45812717 - 45812634
Alignment:
Q  36 agaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||||||||||||  |||||||||||||||| |||| |||||| | |||||||||| || |||||||||||||    
T  45812717 agaggggtaaccttggcgcaactgataaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacagtctcttg 45812634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 14617015 - 14617097
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||||||||| || |||||||||||||||| |||| |||||| || ||||||||| ||||||||| ||||||    
T  14617015 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacagcctcttg 14617097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 119
Target Start/End: Complemental strand, 4430209 - 4430125
Alignment:
Q  35 tagaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||| ||| ||||||||| |||| |||||||||||||||| ||||||||||| |||||| |||||||| ||||||| |||||    
T  4430209 tagagggttaatcttggcgcagctggtaaagttgttgtcatgtgactggaaggtcacgggtttaagtcttgaaaacagtatcttg 4430125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 43 - 119
Target Start/End: Complemental strand, 30395903 - 30395827
Alignment:
Q  43 taaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||| |||||||||||||||| |||  |||||| |||||||||||| ||||||||| ||||||    
T  30395903 taaccttggcgcaactggtaaagttgttgtcatgtgactttaaggtcacgggttcaagtcctggaaacagcctcttg 30395827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 25290143 - 25290214
Alignment:
Q  40 gggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    |||||||||||||||||| || |||||||||||||||| |||| |||||| || ||||||||||||||||||    
T  25290143 gggtaaccttggcgcaacaggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcttggaaaca 25290214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 38478462 - 38478379
Alignment:
Q  36 agaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||||||||||| | ||| |||||||||||| |||| |||||| |||||||||||| | ||||||| ||||||    
T  38478462 agaggggtaaccttggcgcaactagtaaacttgttgtcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttg 38478379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 41319987 - 41319905
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||| | ||||||| |||||||||||||||| |||| |||||| | |||| ||||| ||||||||||||||||    
T  41319987 gaggggtaaccttgacacaactggtaaagttgttgtcatgtgactgaaaggtcacaggtttaagtcctggaaacagtctcttg 41319905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 22327086 - 22327150
Alignment:
Q  46 ccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    |||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||| ||||||||    
T  22327086 ccttggcgcaac-ggcaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaaca 22327150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 45402077 - 45402153
Alignment:
Q  42 gtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||||||| |||||||||||||||| | ||||||||  |||||||||||| ||||||||| ||||||    
T  45402077 gtaaccttggcgcaactggtaaagttgttgtcatgtga-tggaaggtaacgggttcaagtcctggaaacagcctcttg 45402153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 10668196 - 10668284
Alignment:
Q  36 agaggggtaaccttggcgcaactggcaaagttgttgtcatgtaa-----ctggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||||||||||||| |||||||||||||||| |     ||| |||||| |||||||||||| ||||||||| ||||||    
T  10668196 agaggggtaaccttggcgcaactggtaaagttgttgtcatgtgatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 10668284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 119
Target Start/End: Complemental strand, 23768498 - 23768419
Alignment:
Q  40 gggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||| | ||||||||| |||||||||||||||| |||| |||||| | |||||||||| ||||||||| ||||||    
T  23768498 gggtaacctcgacgcaactggtaaagttgttgtcatgtgactgtaaggtcacaggttcaagtcatggaaacagcctcttg 23768419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 102
Target Start/End: Original strand, 40424721 - 40424784
Alignment:
Q  39 ggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtc 102  Q
    |||||||||||||||||||||| |||||||||||||||| |||| |||| | ||||||||||||    
T  40424721 ggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggccacgggttcaagtc 40424784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 115
Target Start/End: Complemental strand, 18742137 - 18742063
Alignment:
Q  42 gtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtctt-ggaaacagtct 115  Q
    ||||||||||||||||||| |||||||||||||||| |||| ||||||  |||||||| |||| |||||||||||    
T  18742137 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaagggttcaaatcttgggaaacagtct 18742063  T

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Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 27201624 - 27201706
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||| ||| || ||| |||||||||||||||| |||| ||||||  ||||||||||| ||||||||| ||||||    
T  27201624 gaggggtaaccttagcgtaaatggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttg 27201706  T

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Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 8197020 - 8197085
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtc 102  Q
    ||||||||||||||| ||||||||  ||||||||||||||| |||| |||||| ||||||||||||    
T  8197020 gaggggtaaccttggtgcaactggtcaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 8197085  T

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Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 119
Target Start/End: Complemental strand, 18724715 - 18724644
Alignment:
Q  47 cttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||| || |||||||||||||||| |||| |||||| |||||||||||| ||||||||| ||||||    
T  18724715 cttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 18724644  T

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Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 19932933 - 19932869
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagt 101  Q
    ||||||| |||||||||||||||| |||||||||||||||| |||| ||||||  ||||||||||    
T  19932933 gaggggttaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagt 19932869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 6925096 - 6925159
Alignment:
Q  56 actggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||| |||||||||||||||| ||||||||||| |||||||||||| |||||| || ||||||    
T  6925096 actggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttg 6925159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 12127010 - 12126941
Alignment:
Q  43 taaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacag 112  Q
    |||||||||||||||| | |||||||||||||||||| || |||||| |||||| ||||  |||||||||    
T  12127010 taaccttggcgcaactcgtaaagttgttgtcatgtaattgaaaggtcacgggtttaagttctggaaacag 12126941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 20036208 - 20036271
Alignment:
Q  47 cttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    |||||||||| ||| |||||||||||||||| |||| |||||| |||||||||||| ||||||||    
T  20036208 cttggcgcaa-tggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 20036271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 119
Target Start/End: Original strand, 33222971 - 33223043
Alignment:
Q  47 cttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||| || |||||||||||||||| |||| |||||| ||| || ||||| ||||||||| ||||||    
T  33222971 cttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacggatttaagtcatggaaacagcctcttg 33223043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 112
Target Start/End: Complemental strand, 2435958 - 2435893
Alignment:
Q  46 ccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacag 112  Q
    |||||||||||| || ||||||||||||| || |||| |||||| |||||||||||| |||||||||    
T  2435958 ccttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacag 2435893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 9939443 - 9939512
Alignment:
Q  43 taaccttggcgcaactggcaaa-gttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    ||||||||||||||| || ||| ||||||||||||| |||| |||||| || ||||||||| ||||||||    
T  9939443 taaccttggcgcaaccggtaaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaaca 9939512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 102
Target Start/End: Original strand, 19414420 - 19414481
Alignment:
Q  41 ggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtc 102  Q
    ||||||||||||| || ||| |||||||||||||| | |||| |||||| ||||||||||||    
T  19414420 ggtaaccttggcgtaattggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtc 19414481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 111
Target Start/End: Original strand, 24564322 - 24564395
Alignment:
Q  38 aggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    ||||||||||||||||||||  | ||||||| |||| ||| | || |||||||| | |||||||||||||||||    
T  24564322 aggggtaaccttggcgcaaccagtaaagttgatgtcttgtgattgaaaggtcgcagattcaagtcttggaaaca 24564395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 52910219 - 52910275
Alignment:
Q  62 aaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctctt 118  Q
    |||||||||||||||| |||| |||||| | ||||||| |||||||||||| |||||    
T  52910219 aaagttgttgtcatgtgactgaaaggtcacaggttcaactcttggaaacagcctctt 52910275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 112
Target Start/End: Complemental strand, 6983980 - 6983915
Alignment:
Q  46 ccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacag 112  Q
    ||||||||||| ||| ||||||||||||| || |||| |||||| | |||||||||| |||||||||    
T  6983980 ccttggcgcaa-tggtaaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacag 6983915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 10163734 - 10163776
Alignment:
Q  35 tagaggggtaaccttggcgcaactggcaaagttgttgtcatgt 77  Q
    |||||||||||| ||||||||||||  ||||||||||||||||    
T  10163734 tagaggggtaacattggcgcaactgataaagttgttgtcatgt 10163776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 18335465 - 18335387
Alignment:
Q  41 ggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||| ||  |||||| |||||||||  ||| |||||| |  ||| ||||| ||||||||||||||||    
T  18335465 ggtaaccttggcgcaagtgataaagtttttgtcatgtgtctgaaaggtcacaagttaaagtcctggaaacagtctcttg 18335387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 21723642 - 21723688
Alignment:
Q  38 aggggtaaccttggcgcaactggcaaagttgttgtcatgtaactgga 84  Q
    |||||||||||| || ||||||| |||||||||||||||| ||||||    
T  21723642 aggggtaaccttcgcacaactggtaaagttgttgtcatgtgactgga 21723688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 2436049 - 2436000
Alignment:
Q  62 aaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    ||||||||||||| || |||| |||||| |||||||||||| ||||||||    
T  2436049 aaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaaca 2436000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 35117924 - 35117867
Alignment:
Q  62 aaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||| || |||| |||||| |||||||||||| |||||| || ||||||    
T  35117924 aaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaatagcctcttg 35117867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 4e-25; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 5648213 - 5648295
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| |||||| |||||||||||| ||||||||| ||||||    
T  5648213 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctggaaacagcctcttg 5648295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 6430806 - 6430724
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| |||||| |||||||||||| ||||||||| ||||||    
T  6430806 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcatggaaacagcctcttg 6430724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 48599004 - 48598922
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| |||||| |||||||||||| ||||||||| ||||||    
T  48599004 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 48598922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 11054328 - 11054245
Alignment:
Q  36 agaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||| ||||||||||||| |||||||||||||||| |||| |||||| |||||||||||| || |||||||||||||    
T  11054328 agaggggtaactttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctgaaaacagtctcttg 11054245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 44 - 119
Target Start/End: Complemental strand, 16408777 - 16408702
Alignment:
Q  44 aaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||| ||||||||| ||||||    
T  16408777 aaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttg 16408702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 21646917 - 21647000
Alignment:
Q  36 agaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||| |||||||||||||||||| |||||||||||||||| ||||||||||| | |||||||||| ||||||||| ||||||    
T  21646917 agagggataaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacagcctcttg 21647000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 5306844 - 5306762
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||||||||| ||||||| |||||||| |||| |||||| |||||||||||| ||||||||| ||||||    
T  5306844 gaggggtaaccttggcgcaactggtaaagttgatgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 5306762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 47528710 - 47528627
Alignment:
Q  36 agaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||| |||||||| |||||||||||||||| |||| |||||| | |||||||||| ||||||||| ||||||    
T  47528710 agaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttg 47528627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 111
Target Start/End: Original strand, 20224938 - 20225012
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| ||||||  ||||||||||| ||||||||    
T  20224938 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaaca 20225012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 23501746 - 23501812
Alignment:
Q  36 agaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtc 102  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||| |||||| ||||||||||||    
T  23501746 agaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 23501812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 30639334 - 30639416
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||||||||| |||||||||||| ||| |||| |||||| | |||||||||| ||||||||| ||||||    
T  30639334 gaggggtaaccttggcgcaactggtaaagttgttgtcttgtgactgaaaggtcactggttcaagtcctggaaacagactcttg 30639416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 40 - 119
Target Start/End: Original strand, 16911519 - 16911598
Alignment:
Q  40 gggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||||||||| |||||||||||||||| |||  |||||| |||||||||||| | ||||||| ||||||    
T  16911519 gggtaaccttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctagaaacagcctcttg 16911598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 55766647 - 55766564
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgc-gggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||| ||||||||| |||||||||||||||| || |||||||| | |||||||||| ||||||||||| |||||    
T  55766647 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtgaccggaaggtcacggggttcaagttttggaaacagtttcttg 55766564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 55830902 - 55830819
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgg-gttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||| ||||||||| |||||||||||||||| |  |||||||| ||| |||||||| |||||||||||||||||    
T  55830902 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtgatcggaaggtcacggagttcaagttttggaaacagtctcttg 55830819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 41 - 119
Target Start/End: Original strand, 14590795 - 14590873
Alignment:
Q  41 ggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||||| |||||||||||||||| |||| |||||| ||| |||||||| | ||||||| ||||||    
T  14590795 ggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctcttg 14590873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 13256580 - 13256508
Alignment:
Q  35 tagaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttgga 107  Q
    ||||||||||||||||| |||||||| |||||||||||||||| |||||||||||   |||||||||| ||||    
T  13256580 tagaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcataggttcaagtcctgga 13256508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 119
Target Start/End: Complemental strand, 8473790 - 8473719
Alignment:
Q  48 ttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||| |||||||||||||| | || ||||||| ||||||||||||| ||||||||| ||||||    
T  8473790 ttggcgcaactggtaaagttgttgtcatatgaccggaaggttgcgggttcaagtcctggaaacagcctcttg 8473719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 111
Target Start/End: Original strand, 10660358 - 10660432
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| |||||  |  ||||||||| ||||||||    
T  10660358 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaaca 10660432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 111
Target Start/End: Original strand, 10874503 - 10874577
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| |||||  |  ||||||||| ||||||||    
T  10874503 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaaca 10874577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 20405047 - 20405104
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcggg 94  Q
    |||||||||||||| ||||||||| |||||||||||||||| ||||||||||| ||||    
T  20405047 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtgactggaaggtcacggg 20405104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 119
Target Start/End: Original strand, 14983791 - 14983870
Alignment:
Q  40 gggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||  |||||| |||||||||||||| | | ||||||||| ||| |||||||||| ||||||| ||||||    
T  14983791 gggtaaccttggcagaactggtaaagttgttgtcatatgattggaaggtcacggattcaagtctttgaaacagcctcttg 14983870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 17315476 - 17315417
Alignment:
Q  40 gggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaa 99  Q
    |||||||||||||||||| || |||||||||||||||| |||| |||||| |||||||||    
T  17315476 gggtaaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacgggttcaa 17315417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 111
Target Start/End: Original strand, 37494804 - 37494879
Alignment:
Q  36 agaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    |||||||||||||||| |||||||| |||||||||| ||||  |||| |||||| | |||||||||| ||||||||    
T  37494804 agaggggtaaccttggtgcaactggtaaagttgttgccatgcgactgaaaggtcacaggttcaagtcctggaaaca 37494879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 62 - 112
Target Start/End: Original strand, 35567149 - 35567199
Alignment:
Q  62 aaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacag 112  Q
    ||||||||||||||||||||| ||||||  |||||||||||||||||||||    
T  35567149 aaagttgttgtcatgtaactgaaaggtcatgggttcaagtcttggaaacag 35567199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 487291 - 487242
Alignment:
Q  62 aaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    |||||||||||||||| |||| |||||| |||||||||||||||||||||    
T  487291 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaaca 487242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 119
Target Start/End: Complemental strand, 30352767 - 30352690
Alignment:
Q  42 gtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||||||| ||||||||||||| || || | |||||| ||||||  |||| ||||||||| ||||||    
T  30352767 gtaaccttggcgcaactggtaaagttgttgtcaagtgaccgaaaggtcacgggttagagtcctggaaacagcctcttg 30352690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 112
Target Start/End: Complemental strand, 5313172 - 5313100
Alignment:
Q  40 gggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacag 112  Q
    |||||||||||||| |||||| |||||||||||||||| | || |||||| ||||||||| || || ||||||    
T  5313172 gggtaaccttggcgtaactggtaaagttgttgtcatgtgattgaaaggtcacgggttcaattcctgaaaacag 5313100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 119
Target Start/End: Complemental strand, 30496491 - 30496419
Alignment:
Q  47 cttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||  ||||||||||||| || |||| |||||| || ||||||||| ||||||||| ||||||    
T  30496491 cttggcgcaactgtaaaagttgttgtcacgtgactgaaaggtcacgtgttcaagtcatggaaacagcctcttg 30496419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 40915802 - 40915865
Alignment:
Q  56 actggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||| |||||||||||||||| |||  |||||| |||||||||||| ||||||||| ||||||    
T  40915802 actggtaaagttgttgtcatgtgactataaggtcacgggttcaagtcctggaaacagcctcttg 40915865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 111
Target Start/End: Complemental strand, 42164317 - 42164255
Alignment:
Q  48 ttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    |||||||||| || ||| |||||||||||| |||| |||||| |||||||||||||||||||||    
T  42164317 ttggcgcaac-ggtaaaattgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaaca 42164255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 18969698 - 18969735
Alignment:
Q  40 gggtaaccttggcgcaactggcaaagttgttgtcatgt 77  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  18969698 gggtaaccttggcgcaactggtaaagttgttgtcatgt 18969735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 119
Target Start/End: Complemental strand, 54640510 - 54640438
Alignment:
Q  46 ccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||| || ||| ||||||||| ||  ||| |||||| |||||||||||||||||||||| ||||||    
T  54640510 ccttggcgcaac-ggtaaaattgttgtcacgtggctgaaaggtcacgggttcaagtcttggaaacagcctcttg 54640438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 39077948 - 39077893
Alignment:
Q  64 agttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||| | || |||||| |||||||||||| ||||||||| ||||||    
T  39077948 agttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttg 39077893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 119
Target Start/End: Original strand, 54730206 - 54730285
Alignment:
Q  40 gggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||| |||||||||  || |||||||||||||||| ||   |||||| |||||||||||| | ||||||| ||||||    
T  54730206 gggtaactttggcgcaatcggtaaagttgttgtcatgtgaccaaaaggtcacgggttcaagtcctagaaacagcctcttg 54730285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 49938759 - 49938689
Alignment:
Q  49 tggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||| |  ||||||||||||| || |||| |||||| | |||||||||| ||||||||| ||||||    
T  49938759 tggcgcaacggtaaaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttg 49938689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 17043549 - 17043493
Alignment:
Q  63 aagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||| || |||| |||||| | |||||||||| ||||||||| ||||||    
T  17043549 aagttgttgtcaagtgactgaaaggtcacaggttcaagtcctggaaacagcctcttg 17043493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 29879678 - 29879626
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtc 89  Q
    |||||||||| |||| |||||||  |||||||||||||||| ||| |||||||    
T  29879678 gaggggtaacattggtgcaactgataaagttgttgtcatgtgactagaaggtc 29879626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 112
Target Start/End: Complemental strand, 44363294 - 44363238
Alignment:
Q  56 actggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacag 112  Q
    ||||| |||||||||||||||| |||| |||||| || ||||||||| || ||||||    
T  44363294 actggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctgaaaacag 44363238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 2e-23; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 37 - 112
Target Start/End: Original strand, 1346918 - 1346993
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacag 112  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| |||||| |||||||||||| |||||||||    
T  1346918 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacag 1346993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 1354936 - 1354854
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| |||||| | |||||||||| ||||||||| ||||||    
T  1354936 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcactggttcaagtcctggaaacagcctcttg 1354854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 119
Target Start/End: Complemental strand, 12222088 - 12222016
Alignment:
Q  47 cttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||| |||||||||||||||| |||| |||||| |||||||||||||||||||||| ||||||    
T  12222088 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacagcctcttg 12222016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 14975261 - 14975179
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||| ||||||||||||||| || |||||||||||||||| ||||||||||| ||| |||||||| ||||||||| ||||||    
T  14975261 gagggataaccttggcgcaaccggtaaagttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcctcttg 14975179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 3815256 - 3815183
Alignment:
Q  39 ggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacag 112  Q
    |||||||||||||||||||||| |||||||||||||||| |||| || ||| |||||||||||| |||||||||    
T  3815256 ggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtcctggaaacag 3815183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 8409197 - 8409279
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||| |||||| ||| |||||||| ||||||| | ||||||    
T  8409197 gaggggtaaccttggcgcaactggtaaagttgttgtaatgtgactgaaaggtcacggattcaagtcctggaaactgcctcttg 8409279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 29356039 - 29355956
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaag-ttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||| ||||||| |||  |||||||||||| |||| |||||| |||||||||||| ||||||||| ||||||    
T  29356039 gaggggtaaccttggcacaactggtaaaaattgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 29355956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 111
Target Start/End: Original strand, 1941809 - 1941883
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    ||||||||||||||| |||||||| |||||||||||||| | ||||||||||||||| || ||||| || |||||    
T  1941809 gaggggtaaccttggtgcaactggtaaagttgttgtcatctgactggaaggtcgcggattgaagtcatgtaaaca 1941883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 9161077 - 9161159
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||| |||||  || |||||||||||||||| |||| |||||| | |||||||||| ||||||||| ||||||    
T  9161077 gaggggtaaccttgacgcaatcggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttg 9161159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 20400618 - 20400703
Alignment:
Q  34 atagaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||| |||||||||||||||| ||| | |||||||||||||| |||| |||||| | |||||||||  |||||||| |||||||    
T  20400618 atagagaggtaaccttggcgcaattggtatagttgttgtcatgtgactgaaaggtcacaggttcaagttatggaaacaatctcttg 20400703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 15866218 - 15866137
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctctt 118  Q
    |||||||||||||||| ||||||| |||||||||| ||||| | || ||||||  |||||||| || ||||||||| |||||    
T  15866218 gaggggtaaccttggcccaactggtaaagttgttggcatgtgattgaaaggtcatgggttcaattcctggaaacagcctctt 15866137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 119
Target Start/End: Original strand, 6024185 - 6024269
Alignment:
Q  35 tagaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||  ||| ||||||||| |||||||||||||||| | ||||||||| ||| ||||| || | ||||||| ||||||    
T  6024185 tagaggggtaattttgacgcaactggtaaagttgttgtcatgtgattggaaggtcacggtttcaaatcctagaaacagcctcttg 6024269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 33923010 - 33922944
Alignment:
Q  36 agaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtc 102  Q
    |||||||||||||||||||||| || |||||||||||||| | |||| || ||| | ||||||||||    
T  33923010 agaggggtaaccttggcgcaaccggtaaagttgttgtcatttgactgaaaagtcacaggttcaagtc 33922944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 2166587 - 2166519
Alignment:
Q  42 gtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    ||||||||| ||||||| | ||||||||||| |||| |||| |||||| |||||||||||| ||||||||    
T  2166587 gtaaccttg-cgcaactagtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaaca 2166519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 2178220 - 2178152
Alignment:
Q  42 gtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    ||||||||| ||||||| | ||||||||||| |||| |||| |||||| |||||||||||| ||||||||    
T  2178220 gtaaccttg-cgcaactagtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaaca 2178152  T

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Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 24734586 - 24734639
Alignment:
Q  36 agaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtc 89  Q
    |||| |||||| ||||||||||||| |||||||||||||||| |||| ||||||    
T  24734586 agagaggtaacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtc 24734639  T

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Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 13905158 - 13905095
Alignment:
Q  38 aggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtc 102  Q
    ||||| |||||||||||||| || |||||||||||||||| |||| |||||| |||| |||||||    
T  13905158 agggggaaccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcacgggctcaagtc 13905095  T

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Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 119
Target Start/End: Original strand, 12063424 - 12063503
Alignment:
Q  40 gggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||| |||||||  ||||||||| |||||  |||| |||||| |||||||||||| | |||| || ||||||    
T  12063424 gggtaaccttggtgcaactgataaagttgttatcatgagactgaaaggtcacgggttcaagtcctagaaatagcctcttg 12063503  T

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Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 115
Target Start/End: Original strand, 8417442 - 8417504
Alignment:
Q  53 gcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtct 115  Q
    |||||||| |||||||||||||||| |||| || ||| || ||||| ||| ||||||||||||    
T  8417442 gcaactggtaaagttgttgtcatgtgactgaaatgtcacgagttcaggtcatggaaacagtct 8417504  T

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Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 111
Target Start/End: Original strand, 22967125 - 22967199
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    ||||||||||||| ||||| |||  |||||| ||||||||| |||| |||||| |  ||||||||| ||||||||    
T  22967125 gaggggtaaccttcgcgcatctgataaagttattgtcatgtgactgtaaggtcactagttcaagtcatggaaaca 22967199  T

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Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 111
Target Start/End: Complemental strand, 23821268 - 23821194
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    ||||||||||||| ||||| |||  |||||| ||||||||| |||| |||||| |  ||||||||| ||||||||    
T  23821268 gaggggtaaccttcgcgcatctgataaagttattgtcatgtgactgtaaggtcactagttcaagtcatggaaaca 23821194  T

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Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 2755580 - 2755531
Alignment:
Q  62 aaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    |||||||||||||||| |||| |||||||  ||||||||||||| |||||    
T  2755580 aaagttgttgtcatgtgactgaaaggtcgtaggttcaagtcttgcaaaca 2755531  T

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Target: scaffold0168 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 30533 - 30615
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| |||||| | |||||||||| ||||||||| ||||||    
T  30533 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttg 30615  T

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Target: scaffold0024 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 111
Target Start/End: Original strand, 83829 - 83903
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    |||||||||||||||||||||| | |||||||||||||||| |||| |||||| |||||||||||||||||||||    
T  83829 gaggggtaaccttggcgcaactagtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaaca 83903  T

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Target: scaffold0187 (Bit Score: 52; Significance: 6e-21; HSPs: 4)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 40 - 119
Target Start/End: Complemental strand, 10226 - 10147
Alignment:
Q  40 gggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||| ||||||||| |||||||||||||||| |||| |||||| |||||||||||| ||||||||| ||||||    
T  10226 gggtaaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 10147  T

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Target: scaffold0187; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 40 - 119
Target Start/End: Complemental strand, 20554 - 20475
Alignment:
Q  40 gggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||| ||||||||| |||||||||||||||| |||| |||||| |||||||||||| ||||||||| ||||||    
T  20554 gggtaaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 20475  T

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Target: scaffold0187; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 8899 - 8964
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtc 102  Q
    ||||||||||||||||||||| ||  ||||||||||||||| |||| || ||| | ||||||||||    
T  8899 gaggggtaaccttggcgcaaccggtgaagttgttgtcatgtgactgaaatgtcacaggttcaagtc 8964  T

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Target: scaffold0187; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 19227 - 19292
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtc 102  Q
    ||||||||||||||||||||| ||  ||||||||||||||| |||| || ||| | ||||||||||    
T  19227 gaggggtaaccttggcgcaaccggtgaagttgttgtcatgtgactgaaatgtcacaggttcaagtc 19292  T

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Target: scaffold0258 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 34 - 119
Target Start/End: Complemental strand, 13207 - 13122
Alignment:
Q  34 atagaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||| ||||||||||||||||||| || |||||||||||||||| |||| |||||| | |||||||||| ||||||||| ||||||    
T  13207 atagtggggtaaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttg 13122  T

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Target: scaffold0005 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 226583 - 226505
Alignment:
Q  41 ggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||||||||||||| |||||||||||||||| |||| |||||| ||| |||||||| | ||||||| ||||||    
T  226583 ggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctcttg 226505  T

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Target: scaffold0057 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 24948 - 24883
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtc 102  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| ||||||  |||||||||||    
T  24948 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtc 24883  T

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Target: scaffold0057; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 46794 - 46859
Alignment:
Q  46 ccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    ||||||||||| ||| |||||||||||||||| ||| ||||||| |||||||||||  ||||||||    
T  46794 ccttggcgcaattggtaaagttgttgtcatgtgactagaaggtcacgggttcaagtgctggaaaca 46859  T

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Target: scaffold0049 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 58936 - 59013
Alignment:
Q  42 gtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    |||||||||| |||||||| ||| || ||||||||| |||| |||||| |||||||||||| ||||||||| ||||||    
T  58936 gtaaccttggagcaactggtaaacttattgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 59013  T

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Target: scaffold0223 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 119
Target Start/End: Original strand, 11093 - 11167
Alignment:
Q  44 aaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||||||||||||||| ||||||||| | |||| |||| |||||| |||||||||||| ||||||||| ||||||    
T  11093 aaccttggcgcaactggtaaagttgttct-atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttg 11167  T

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Target: scaffold0311 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 100
Target Start/End: Original strand, 10773 - 10827
Alignment:
Q  46 ccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaag 100  Q
    |||||| |||||||| |||||||||||||||| ||||||||||| ||||||||||    
T  10773 ccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaag 10827  T

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Target: scaffold0194 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 24619 - 24693
Alignment:
Q  38 aggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacag 112  Q
    ||||||||||||||| ||| ||  ||||||||||||| || |||| |||||| |||||||||||| |||||||||    
T  24619 aggggtaaccttggcacaattgataaagttgttgtcaagtgactgtaaggtcacgggttcaagtcctggaaacag 24693  T

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Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 35200 - 35117
Alignment:
Q  37 gaggggtaaccttggcgcaactggcaaagttg-ttgtcatgtaactggaaggtcgcgggttcaagtcttggaaacagtctcttg 119  Q
    ||||| |||| |||| |||||||| ||||||  ||||||||| |||| |||||| |||||||||||| || |||||||||||||    
T  35200 gagggataactttggtgcaactggtaaagtttattgtcatgtgactgtaaggtcacgggttcaagtcctgaaaacagtctcttg 35117  T

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Target: scaffold0254 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 4117 - 4185
Alignment:
Q  42 gtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    ||||||||| ||||||| | ||||||||||| |||| |||| |||||| |||||||||||| ||||||||    
T  4117 gtaaccttg-cgcaactagtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaaca 4185  T

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Target: scaffold1176 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 1758 - 1692
Alignment:
Q  45 accttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    |||||| ||||| ||| |||||||||||||||| |||| ||||||  ||||||||||| || |||||    
T  1758 accttgacgcaattggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaaca 1692  T

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Target: scaffold0116 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 111
Target Start/End: Original strand, 8847 - 8919
Alignment:
Q  36 agaggggtaaccttggcgcaactggcaaagttgttgtcatgtaactggaaggtcgcgggttcaagtcttggaaaca 111  Q
    ||||||||||||||| |||   ||| |||||||||||||||| |||| |||||| | ||||||| || ||||||||    
T  8847 agaggggtaaccttgacgc---tggtaaagttgttgtcatgtgactgtaaggtcacaggttcaattcctggaaaca 8919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 73034 - 73002
Alignment:
Q  45 accttggcgcaactggcaaagttgttgtcatgt 77  Q
    |||||||||||||||| ||||||||||||||||    
T  73034 accttggcgcaactggtaaagttgttgtcatgt 73002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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