View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18955_low_21 (Length: 218)

Name: NF18955_low_21
Description: NF18955
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18955_low_21
NF18955_low_21
[»] chr5 (37 HSPs)
chr5 (124-218)||(10043363-10043457)
chr5 (124-218)||(34980921-34981015)
chr5 (124-218)||(10204687-10204781)
chr5 (127-210)||(6597837-6597920)
chr5 (131-210)||(33744240-33744319)
chr5 (124-218)||(40305704-40305798)
chr5 (125-217)||(12035976-12036067)
chr5 (125-218)||(10043048-10043141)
chr5 (140-213)||(6382454-6382527)
chr5 (125-218)||(15986663-15986756)
chr5 (125-184)||(8551491-8551550)
chr5 (124-213)||(21581058-21581148)
chr5 (124-213)||(11437050-11437139)
chr5 (13-58)||(13634910-13634955)
chr5 (14-58)||(13634712-13634756)
chr5 (14-58)||(14245245-14245289)
chr5 (14-58)||(16938480-16938524)
chr5 (14-57)||(5688590-5688633)
chr5 (14-57)||(14245089-14245132)
chr5 (14-60)||(7544137-7544183)
chr5 (17-58)||(2550551-2550592)
chr5 (14-63)||(10204577-10204626)
chr5 (14-63)||(15986818-15986867)
chr5 (14-58)||(10476027-10476071)
chr5 (14-50)||(20147077-20147113)
chr5 (14-58)||(26414894-26414938)
chr5 (15-58)||(1658012-1658055)
chr5 (124-211)||(13839774-13839861)
chr5 (142-216)||(2183943-2184017)
chr5 (14-56)||(10476229-10476271)
chr5 (18-60)||(11436944-11436986)
chr5 (14-56)||(40305866-40305908)
chr5 (14-63)||(33744387-33744436)
chr5 (124-172)||(5688524-5688572)
chr5 (16-48)||(14681473-14681505)
chr5 (15-63)||(34980812-34980860)
chr5 (14-50)||(40305671-40305707)
[»] chr8 (34 HSPs)
chr8 (124-218)||(12022182-12022276)
chr8 (124-213)||(8815185-8815274)
chr8 (124-218)||(6453295-6453389)
chr8 (124-210)||(16024265-16024350)
chr8 (124-210)||(43732798-43732884)
chr8 (125-209)||(29937614-29937698)
chr8 (124-218)||(30365241-30365335)
chr8 (124-218)||(34196420-34196513)
chr8 (124-211)||(20472738-20472825)
chr8 (128-210)||(9933356-9933438)
chr8 (124-210)||(8671839-8671927)
chr8 (140-199)||(40633047-40633106)
chr8 (124-181)||(43826443-43826500)
chr8 (124-195)||(9434360-9434432)
chr8 (124-183)||(39449415-39449474)
chr8 (14-63)||(12022337-12022386)
chr8 (14-56)||(13404977-13405019)
chr8 (124-218)||(24243088-24243180)
chr8 (14-63)||(8815335-8815384)
chr8 (14-63)||(43732680-43732729)
chr8 (14-58)||(31543271-31543315)
chr8 (14-58)||(43732886-43732930)
chr8 (19-58)||(1281149-1281188)
chr8 (15-62)||(16024155-16024202)
chr8 (14-49)||(16652959-16652994)
chr8 (14-56)||(2248453-2248495)
chr8 (17-55)||(7394663-7394701)
chr8 (14-55)||(9718681-9718722)
chr8 (14-50)||(3726864-3726900)
chr8 (14-50)||(4247727-4247763)
chr8 (14-58)||(7503153-7503197)
chr8 (124-164)||(22591501-22591541)
chr8 (14-58)||(34634342-34634386)
chr8 (14-58)||(41103505-41103549)
[»] chr2 (36 HSPs)
chr2 (125-211)||(42813732-42813818)
chr2 (124-210)||(45257418-45257504)
chr2 (124-211)||(15085745-15085833)
chr2 (124-203)||(3094407-3094486)
chr2 (128-215)||(42296345-42296432)
chr2 (124-218)||(36052126-36052220)
chr2 (140-211)||(9313114-9313185)
chr2 (124-218)||(33265717-33265811)
chr2 (124-216)||(21502144-21502236)
chr2 (128-210)||(1052801-1052884)
chr2 (128-218)||(31061474-31061565)
chr2 (124-207)||(35325380-35325463)
chr2 (124-199)||(45098280-45098355)
chr2 (150-206)||(22356140-22356197)
chr2 (131-184)||(34187695-34187748)
chr2 (140-206)||(16713652-16713718)
chr2 (124-205)||(8554351-8554432)
chr2 (14-63)||(31061360-31061409)
chr2 (14-58)||(17379847-17379891)
chr2 (124-180)||(31928121-31928177)
chr2 (14-58)||(35736176-35736220)
chr2 (124-187)||(2381057-2381120)
chr2 (167-218)||(14196823-14196874)
chr2 (124-218)||(31795808-31795902)
chr2 (14-56)||(36347742-36347784)
chr2 (14-63)||(23748289-23748338)
chr2 (14-63)||(35736381-35736430)
chr2 (14-58)||(22356203-22356247)
chr2 (20-63)||(31928243-31928286)
chr2 (15-58)||(41841684-41841727)
chr2 (15-57)||(36046401-36046443)
chr2 (169-218)||(14187113-14187162)
chr2 (14-47)||(17380051-17380084)
chr2 (14-63)||(42296497-42296546)
chr2 (14-63)||(45257308-45257357)
chr2 (14-58)||(41778774-41778818)
[»] scaffold0240 (1 HSPs)
scaffold0240 (124-210)||(17651-17737)
[»] chr7 (46 HSPs)
chr7 (124-218)||(28074142-28074236)
chr7 (124-218)||(36267592-36267686)
chr7 (124-210)||(33519159-33519245)
chr7 (128-216)||(21857462-21857549)
chr7 (124-210)||(35422075-35422161)
chr7 (137-213)||(2087783-2087859)
chr7 (124-211)||(48881604-48881691)
chr7 (124-218)||(3215900-3215993)
chr7 (124-218)||(39646580-39646674)
chr7 (124-218)||(30592292-30592386)
chr7 (124-218)||(37925952-37926046)
chr7 (124-207)||(37620885-37620968)
chr7 (129-211)||(48015323-48015405)
chr7 (124-211)||(31364091-31364175)
chr7 (132-211)||(48013622-48013701)
chr7 (125-218)||(48094005-48094098)
chr7 (14-62)||(36267748-36267796)
chr7 (129-184)||(8122264-8122319)
chr7 (14-63)||(37925842-37925891)
chr7 (124-216)||(16833806-16833901)
chr7 (14-58)||(39856064-39856108)
chr7 (124-218)||(23116298-23116393)
chr7 (175-210)||(32872828-32872863)
chr7 (14-60)||(36267554-36267600)
chr7 (125-182)||(7791831-7791888)
chr7 (157-218)||(12670572-12670633)
chr7 (124-165)||(12670928-12670969)
chr7 (15-56)||(37620776-37620817)
chr7 (14-50)||(1051705-1051741)
chr7 (14-58)||(33519247-33519291)
chr7 (124-204)||(3143591-3143675)
chr7 (14-57)||(13770949-13770992)
chr7 (14-57)||(25887193-25887236)
chr7 (14-56)||(28074104-28074146)
chr7 (16-50)||(31364251-31364285)
chr7 (14-56)||(31571671-31571713)
chr7 (14-60)||(48881559-48881605)
chr7 (14-48)||(48881758-48881792)
chr7 (14-63)||(28074302-28074351)
chr7 (18-63)||(33519053-33519098)
chr7 (14-55)||(41496958-41496999)
chr7 (14-58)||(4833532-4833576)
chr7 (14-50)||(13771153-13771189)
chr7 (14-50)||(40196533-40196569)
chr7 (14-50)||(40282198-40282234)
chr7 (14-50)||(47390856-47390892)
[»] chr4 (52 HSPs)
chr4 (124-218)||(22186830-22186924)
chr4 (124-218)||(55080690-55080784)
chr4 (124-218)||(43961521-43961615)
chr4 (124-218)||(4437464-4437558)
chr4 (124-213)||(34995162-34995249)
chr4 (124-218)||(54576366-54576460)
chr4 (124-218)||(7977534-7977629)
chr4 (130-216)||(5825013-5825099)
chr4 (124-218)||(37761575-37761669)
chr4 (124-210)||(47846102-47846188)
chr4 (124-206)||(29993822-29993904)
chr4 (124-211)||(54001152-54001236)
chr4 (124-211)||(51329906-51329992)
chr4 (124-210)||(11089627-11089713)
chr4 (124-206)||(14539383-14539465)
chr4 (124-218)||(21694929-21695022)
chr4 (124-210)||(17182530-17182618)
chr4 (153-218)||(35543346-35543411)
chr4 (131-187)||(51075215-51075271)
chr4 (124-218)||(44145842-44145936)
chr4 (14-63)||(49735469-49735518)
chr4 (14-58)||(37711139-37711183)
chr4 (14-58)||(49735691-49735735)
chr4 (14-58)||(54320633-54320677)
chr4 (124-200)||(55510281-55510356)
chr4 (14-58)||(56135750-56135794)
chr4 (125-184)||(9030328-9030387)
chr4 (16-58)||(46007900-46007942)
chr4 (14-50)||(1968566-1968602)
chr4 (14-58)||(31348520-31348564)
chr4 (14-58)||(37711322-37711366)
chr4 (14-50)||(54935068-54935104)
chr4 (14-58)||(54935268-54935312)
chr4 (15-58)||(47846255-47846298)
chr4 (124-210)||(24565393-24565479)
chr4 (14-56)||(26166938-26166980)
chr4 (167-208)||(6938401-6938442)
chr4 (14-55)||(41174547-41174588)
chr4 (14-63)||(44145774-44145823)
chr4 (175-212)||(45911325-45911362)
chr4 (15-60)||(54576329-54576374)
chr4 (124-171)||(56135860-56135904)
chr4 (14-58)||(5730831-5730875)
chr4 (16-56)||(5731032-5731072)
chr4 (14-46)||(5824902-5824934)
chr4 (14-58)||(7977696-7977740)
chr4 (186-218)||(17182658-17182690)
chr4 (20-60)||(35565565-35565605)
chr4 (14-58)||(36151577-36151621)
chr4 (14-46)||(45741891-45741923)
chr4 (14-50)||(53260719-53260755)
chr4 (14-50)||(54320436-54320472)
[»] chr1 (36 HSPs)
chr1 (124-217)||(40709332-40709425)
chr1 (125-218)||(35512909-35513002)
chr1 (124-218)||(1085528-1085623)
chr1 (124-210)||(25268375-25268461)
chr1 (128-218)||(47071166-47071256)
chr1 (124-210)||(35927924-35928009)
chr1 (127-210)||(13386966-13387049)
chr1 (124-213)||(2506650-2506739)
chr1 (124-205)||(33643379-33643460)
chr1 (131-206)||(1344666-1344741)
chr1 (124-218)||(51303423-51303517)
chr1 (124-210)||(525148-525232)
chr1 (14-63)||(51303385-51303434)
chr1 (14-58)||(26324015-26324059)
chr1 (124-212)||(52707756-52707844)
chr1 (14-57)||(30010333-30010376)
chr1 (14-60)||(12234011-12234057)
chr1 (158-212)||(33673360-33673414)
chr1 (14-63)||(35927815-35927864)
chr1 (14-58)||(20607416-20607460)
chr1 (14-58)||(41498405-41498449)
chr1 (15-58)||(12234209-12234252)
chr1 (124-201)||(20607330-20607404)
chr1 (17-60)||(35512994-35513037)
chr1 (14-48)||(26941042-26941076)
chr1 (16-58)||(38510093-38510135)
chr1 (124-178)||(40287334-40287388)
chr1 (14-63)||(38509895-38509944)
chr1 (14-50)||(525307-525343)
chr1 (14-50)||(1085697-1085733)
chr1 (14-58)||(2858933-2858977)
chr1 (16-56)||(20576136-20576176)
chr1 (14-50)||(20607224-20607260)
chr1 (14-58)||(30010531-30010575)
chr1 (14-58)||(35349661-35349705)
chr1 (14-58)||(40094934-40094978)
[»] scaffold0026 (3 HSPs)
scaffold0026 (125-216)||(1438-1529)
scaffold0026 (14-63)||(1592-1641)
scaffold0026 (16-56)||(1175-1215)
[»] chr3 (38 HSPs)
chr3 (124-218)||(34641103-34641195)
chr3 (124-218)||(44412472-44412566)
chr3 (128-206)||(48683727-48683806)
chr3 (124-206)||(10943665-10943747)
chr3 (124-210)||(26135908-26135994)
chr3 (124-206)||(40858676-40858758)
chr3 (126-210)||(55428492-55428576)
chr3 (124-215)||(24253833-24253924)
chr3 (124-210)||(17474253-17474339)
chr3 (124-210)||(42772143-42772229)
chr3 (124-218)||(8432300-8432392)
chr3 (124-210)||(41414189-41414276)
chr3 (124-211)||(18086026-18086114)
chr3 (124-212)||(36727287-36727375)
chr3 (124-199)||(21090129-21090204)
chr3 (140-211)||(54985739-54985810)
chr3 (124-200)||(42699669-42699745)
chr3 (124-218)||(16884012-16884104)
chr3 (124-180)||(46978538-46978594)
chr3 (125-172)||(27197734-27197781)
chr3 (14-60)||(34641187-34641233)
chr3 (124-206)||(45663197-45663277)
chr3 (14-58)||(24560218-24560262)
chr3 (128-206)||(39146995-39147071)
chr3 (14-56)||(24560418-24560460)
chr3 (14-48)||(37102348-37102382)
chr3 (17-55)||(55428581-55428619)
chr3 (14-63)||(41414079-41414128)
chr3 (169-218)||(49815461-49815510)
chr3 (14-51)||(54574562-54574599)
chr3 (14-58)||(18654601-18654645)
chr3 (16-56)||(18654802-18654842)
chr3 (14-50)||(24253722-24253758)
chr3 (14-58)||(28582708-28582752)
chr3 (14-50)||(41110528-41110564)
chr3 (15-63)||(42772046-42772094)
chr3 (14-62)||(44412362-44412410)
chr3 (15-63)||(44412555-44412603)
[»] chr6 (29 HSPs)
chr6 (132-210)||(9051581-9051659)
chr6 (124-210)||(31799032-31799118)
chr6 (124-211)||(10293359-10293446)
chr6 (124-210)||(26318416-26318502)
chr6 (128-218)||(34176610-34176700)
chr6 (124-213)||(3841196-3841286)
chr6 (127-194)||(15323339-15323406)
chr6 (127-194)||(15353477-15353544)
chr6 (124-210)||(4097282-4097368)
chr6 (124-210)||(25468446-25468532)
chr6 (127-184)||(15373672-15373729)
chr6 (14-63)||(23090996-23091045)
chr6 (14-58)||(14515474-14515518)
chr6 (16-57)||(9719034-9719075)
chr6 (14-55)||(10818230-10818271)
chr6 (14-63)||(15323226-15323275)
chr6 (14-63)||(15353365-15353414)
chr6 (14-63)||(30487307-30487356)
chr6 (14-58)||(9721139-9721183)
chr6 (124-218)||(30849953-30850045)
chr6 (14-48)||(4097236-4097270)
chr6 (16-58)||(19278236-19278278)
chr6 (14-55)||(9051734-9051775)
chr6 (16-48)||(7775959-7775991)
chr6 (14-58)||(10818415-10818459)
chr6 (14-58)||(12811179-12811223)
chr6 (14-58)||(14515670-14515714)
chr6 (150-206)||(28477126-28477182)
chr6 (150-206)||(29693023-29693079)
[»] scaffold0007 (1 HSPs)
scaffold0007 (128-210)||(242331-242413)
[»] scaffold0012 (1 HSPs)
scaffold0012 (124-210)||(184718-184804)
[»] scaffold0071 (1 HSPs)
scaffold0071 (128-209)||(53000-53081)
[»] scaffold0119 (1 HSPs)
scaffold0119 (124-207)||(37494-37577)
[»] scaffold0095 (1 HSPs)
scaffold0095 (124-183)||(8258-8317)
[»] scaffold1414 (1 HSPs)
scaffold1414 (124-185)||(412-474)
[»] scaffold0198 (1 HSPs)
scaffold0198 (16-56)||(3150-3190)
[»] scaffold0067 (1 HSPs)
scaffold0067 (14-58)||(39389-39433)
[»] scaffold0027 (1 HSPs)
scaffold0027 (174-218)||(122023-122067)
[»] scaffold0018 (1 HSPs)
scaffold0018 (124-199)||(69264-69340)


Alignment Details
Target: chr5 (Bit Score: 83; Significance: 2e-39; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 10043363 - 10043457
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  10043363 gaagtattatatgattatttataatgttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtgagtcctccc 10043457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 34980921 - 34981015
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    |||||||||||| || |||||||| |||||||| ||||||||||| ||||||||||||||| | | |||||||||||||||||||||||||||||    
T  34980921 gaagtattatataatcatttatcatgttgttaactcaattttctataaatcattttataatgtccataatttaaaaaagaaaagtaagtcctccc 34981015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 10204687 - 10204781
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    ||||||||||||||| |||||| | ||||||||||||||||| ||||||||||||| |||| |  |||| |||||||||||||||||||||||||    
T  10204687 gaagtattatatgatcatttattacgttgttaattcaattttttaaaaatcattttttaatgtctgtaaattaaaaaagaaaagtaagtcctccc 10204781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 127 - 210
Target Start/End: Complemental strand, 6597920 - 6597837
Alignment:
Q  127 gtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaa 210  Q
    |||||||||||| |||||||| ||||||| |||||||||| ||||||||||||| ||| | |||||||||||||||||||||||    
T  6597920 gtattatatgatcatttatcatgttgttatttcaattttcaaaaaatcattttacaatgtccgtaatttaaaaaagaaaagtaa 6597837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 33744319 - 33744240
Alignment:
Q  131 tatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaa 210  Q
    |||||||| |||||||| |||||||||||||||||| ||||||||||||||||| | | |||||||||||||||||||||    
T  33744319 tatatgatcatttatcatgttgttaattcaattttcaaaaaatcattttataatgtccataatttaaaaaagaaaagtaa 33744240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 40305798 - 40305704
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    |||||| |||||||| ||||||||  |||||||||||||||||||||||| |||||||||| |  |||||||||||||||||| |||| ||||||    
T  40305798 gaagtactatatgatcatttatcatattgttaattcaattttctaaaaattattttataatgtctgtaatttaaaaaagaaaactaagccctccc 40305704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 125 - 217
Target Start/End: Complemental strand, 12036067 - 12035976
Alignment:
Q  125 aagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctcc 217  Q
    |||||||||||||| |||||||| ||||| ||||||||||||||| ||| |||||||||| ||| |||||||||||||||||  |||||||||    
T  12036067 aagtattatatgataatttatcatgttgt-aattcaattttctaataataattttataatgttcataatttaaaaaagaaaaacaagtcctcc 12035976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 125 - 218
Target Start/End: Complemental strand, 10043141 - 10043048
Alignment:
Q  125 aagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    |||||||||||||| |||||||| |||||||||||||||||||| |||| ||| | |||| ||  |||||||| ||||||||||||||| ||||    
T  10043141 aagtattatatgatcatttatcatgttgttaattcaattttctagaaataattctttaatgtttataatttaagaaagaaaagtaagtcatccc 10043048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 213
Target Start/End: Original strand, 6382454 - 6382527
Alignment:
Q  140 atttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtc 213  Q
    |||||||| ||||||||||||||||||||||||  |||||||||| | ||||| ||| ||||||||||||||||    
T  6382454 atttatcatgttgttaattcaattttctaaaaagtattttataatgtccgtaaattagaaaagaaaagtaagtc 6382527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 125 - 218
Target Start/End: Complemental strand, 15986756 - 15986663
Alignment:
Q  125 aagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    |||||||||||||| ||||   | ||||||||||||||||| ||||| |||||||||||| |  |||| ||||||||||||| |||||||||||    
T  15986756 aagtattatatgatcattttaaatgttgttaattcaattttttaaaagtcattttataatgtctgtaaattaaaaaagaaaattaagtcctccc 15986663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 125 - 184
Target Start/End: Complemental strand, 8551550 - 8551491
Alignment:
Q  125 aagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataat 184  Q
    |||||||||||||| |||||| | |||||||||| |||||| ||||||||||||||||||    
T  8551550 aagtattatatgatcatttataatgttgttaatttaattttttaaaaatcattttataat 8551491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 213
Target Start/End: Original strand, 21581058 - 21581148
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaattt-aaaaaagaaaagtaagtc 213  Q
    ||||||| ||||||  |||||||| ||||||||||||||||||||||||| |||| ||||  | | |||||| ||||||||||||| ||||    
T  21581058 gaagtatcatatgaacatttatcatgttgttaattcaattttctaaaaattatttcataacgtccataatttaaaaaaagaaaagttagtc 21581148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 213
Target Start/End: Original strand, 11437050 - 11437139
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtc 213  Q
    ||||||||||| ||| |||||||  | ||||| || |||||| |||||| ||||||||| | ||| || |||||||||||||||||||||    
T  11437050 gaagtattatacgatcatttatcgcgctgttattttaattttttaaaaaacattttatagtgttcctattttaaaaaagaaaagtaagtc 11437139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 13634955 - 13634910
Alignment:
Q  13 ggggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||    
T  13634955 ggggtgtgtttggattgagggtttaggaggggaagggaggggaggg 13634910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 13634712 - 13634756
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||    
T  13634712 gggtgtgtttggattgagggtttaggaggggaagggaggggaggg 13634756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 14245289 - 14245245
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||    
T  14245289 gggtgtgtttggattgagggtttaggaggggaagggaggggaggg 14245245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 16938480 - 16938524
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||    
T  16938480 gggtgtgtttggattgagggtttaggaggggaagggaggggaggg 16938524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 5688633 - 5688590
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggagg 57  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||    
T  5688633 gggtgtgtttggattgagggtttaggaggggaagggaagggagg 5688590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 14245089 - 14245132
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggagg 57  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||    
T  14245089 gggtgtgtttggattgagggtttaggaggggaagggaggggagg 14245132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 7544137 - 7544183
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggagggct 60  Q
    ||||||||||||||||||||||| ||| ||||||||| |||||||||    
T  7544137 gggtgtgtttggattgagggtttaggaagggaagggaggggagggct 7544183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 2550592 - 2550551
Alignment:
Q  17 tgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    |||||||||||||||||||| ||||||||||||| |||||||    
T  2550592 tgtgtttggattgagggtttaggaggggaagggaggggaggg 2550551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 10204577 - 10204626
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggagggctcac 63  Q
    |||||||||||||| |||||||| ||||||||||||| | ||||||||||    
T  10204577 gggtgtgtttggatcgagggtttaggaggggaagggaggtgagggctcac 10204626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 15986867 - 15986818
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggagggctcac 63  Q
    ||||||||||||||||||||||| ||||||||||| |  |||||||||||    
T  15986867 gggtgtgtttggattgagggtttaggaggggaaggaagaggagggctcac 15986818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 10476027 - 10476071
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    ||||||||||| ||||||||||| ||||||||||||||| |||||    
T  10476027 gggtgtgtttgaattgagggtttaggaggggaagggatgagaggg 10476071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 50
Target Start/End: Complemental strand, 20147113 - 20147077
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaaggga 50  Q
    ||||||||||||||||||||||| |||||||||||||    
T  20147113 gggtgtgtttggattgagggtttaggaggggaaggga 20147077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 26414894 - 26414938
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    ||||||||||||||||||||||| ||||| ||||||| |||||||    
T  26414894 gggtgtgtttggattgagggtttaggaggagaagggaggggaggg 26414938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 1658055 - 1658012
Alignment:
Q  15 ggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    ||||||||||||| |||||||| ||||||||||||| |||||||    
T  1658055 ggtgtgtttggatggagggtttaggaggggaagggaggggaggg 1658012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 211
Target Start/End: Complemental strand, 13839861 - 13839774
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaag 211  Q
    |||||||||||||||| | ||||| ||| ||| ||||| |||  ||||  ||||||||| | | | ||||||||||||||||||||||    
T  13839861 gaagtattatatgattgtctatcatgttattatttcaacttttcaaaatacattttatagtgtccataatttaaaaaagaaaagtaag 13839774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 2183943 - 2184017
Alignment:
Q  142 ttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctc 216  Q
    |||||| ||||||| ||||||||| |||| | ||||||||||| | ||||||||||| | ||||| |||| ||||    
T  2183943 ttatcatgttgttatttcaattttttaaataacattttataatgtccgtaatttaaagaggaaaaataagccctc 2184017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 10476271 - 10476229
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggag 56  Q
    |||||||||||||| |||||||| ||||||||||||| |||||    
T  10476271 gggtgtgtttggatggagggtttaggaggggaagggaggggag 10476229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 11436944 - 11436986
Alignment:
Q  18 gtgtttggattgagggttttggaggggaagggatgggagggct 60  Q
    ||||||||||||||||||| |||||||||||||  ||||||||    
T  11436944 gtgtttggattgagggtttaggaggggaagggagaggagggct 11436986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 40305908 - 40305866
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggag 56  Q
    ||||||||||||||||||||||| ||||| ||||||| |||||    
T  40305908 gggtgtgtttggattgagggtttaggaggagaagggaggggag 40305866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 33744436 - 33744387
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggagggctcac 63  Q
    |||||| |||||||||||||||| ||||  ||||||| ||||||||||||    
T  33744436 gggtgtatttggattgagggtttaggagatgaagggaggggagggctcac 33744387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 5688524 - 5688572
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaa 172  Q
    |||||||||||| || ||  |||| ||||||||||||||||||||||||    
T  5688524 gaagtattatatcatcatcaatcatgttgttaattcaattttctaaaaa 5688572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 14681473 - 14681505
Alignment:
Q  16 gtgtgtttggattgagggttttggaggggaagg 48  Q
    ||||||||||||||||||||| |||||||||||    
T  14681473 gtgtgtttggattgagggtttaggaggggaagg 14681505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 34980812 - 34980860
Alignment:
Q  15 ggtgtgtttggattgagggttttggaggggaagggatgggagggctcac 63  Q
    |||||||||||||||| ||||| ||||||||||||| || |||| ||||    
T  34980812 ggtgtgtttggattgaaggtttaggaggggaagggagggaagggttcac 34980860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 40305671 - 40305707
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaaggga 50  Q
    |||||||||||||| |||||||| |||||||||||||    
T  40305671 gggtgtgtttggatggagggtttaggaggggaaggga 40305707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 4e-37; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 12022276 - 12022182
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  12022276 gaagtattatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgttcgtaatttaaaaaagaaaagtaagccctccc 12022182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 124 - 213
Target Start/End: Complemental strand, 8815274 - 8815185
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtc 213  Q
    |||||||||||| || |||||||| |||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  8815274 gaagtattatataatcatttatcatgttgttgattcaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaagtaagtc 8815185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 6453295 - 6453389
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    ||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||  | |||||||||||| |||||| ||||||||||    
T  6453295 gaagtattatatgattacttatcatgttattaattcaattttctaaaaatcattttataatgattgtaatttaaaaaggaaaagcaagtcctccc 6453389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 124 - 210
Target Start/End: Original strand, 16024265 - 16024350
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaa 210  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||    
T  16024265 gaagtattatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtccgtaattt-aaaaagaaaagtaa 16024350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 124 - 210
Target Start/End: Original strand, 43732798 - 43732884
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaa 210  Q
    ||||||||||||||| ||||||||  ||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||    
T  43732798 gaagtattatatgatcatttatcatattgttaattcaattttcaaaaaatcattttataatgtccgtaatttaaaaaagaaaagtaa 43732884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 125 - 209
Target Start/End: Original strand, 29937614 - 29937698
Alignment:
Q  125 aagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagta 209  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| | | |||||| |||||||||||||    
T  29937614 aagtattatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtccataattttaaaaagaaaagta 29937698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 30365241 - 30365335
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    ||||| |||||| || |||||||| |||||||||||||||||||||||||||||| ||||| |  ||||||||||||||||||| ||| ||||||    
T  30365241 gaagtgttatataatcatttatcatgttgttaattcaattttctaaaaatcatttcataatgtctgtaatttaaaaaagaaaaggaagccctccc 30365335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 34196420 - 34196513
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    |||||||||||||||  ||||||  |||||||||||||||||||||||||||||||||||| |  ||||||| ||||||||||||||| ||||||    
T  34196420 gaagtattatatgatcgtttatcttgttgttaattcaattttctaaaaatcattttataatgtctgtaattt-aaaaagaaaagtaagccctccc 34196513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 124 - 211
Target Start/End: Complemental strand, 20472825 - 20472738
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaag 211  Q
    ||||||||||||||| || |||||  |||||||||||||||||||||| | |||||||||| |  |||||||||||||||||||||||    
T  20472825 gaagtattatatgatcatatatcatattgttaattcaattttctaaaatttattttataatgtctgtaatttaaaaaagaaaagtaag 20472738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 9933356 - 9933438
Alignment:
Q  128 tattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaa 210  Q
    ||||||||||| |||||||| ||||||||||||||||| | |||||||||||||||| | |  | ||||||||||||||||||    
T  9933356 tattatatgatcatttatcatgttgttaattcaatttttttaaaatcattttataatgtccaaattttaaaaaagaaaagtaa 9933438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 210
Target Start/End: Complemental strand, 8671927 - 8671839
Alignment:
Q  124 gaagtattatatgattatttat--caagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaa 210  Q
    ||||||||||||||| |||| |  ||  ||||||||||||||||||||||||||||||||||| | |||||||||||||  ||||||||    
T  8671927 gaagtattatatgatcatttttttcatattgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaagaaaaagtaa 8671839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 40633106 - 40633047
Alignment:
Q  140 atttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaa 199  Q
    |||||||| ||||||||||||||||||||||||| |||||||||| | ||||||||||||    
T  40633106 atttatcatgttgttaattcaattttctaaaaattattttataatgtccgtaatttaaaa 40633047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 124 - 181
Target Start/End: Original strand, 43826443 - 43826500
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttat 181  Q
    |||||||| |||||| |||||||| ||||||||||||||||||||||||| |||||||    
T  43826443 gaagtattttatgatcatttatcatgttgttaattcaattttctaaaaattattttat 43826500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 195
Target Start/End: Complemental strand, 9434432 - 9434360
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatca-ttttataatattcgtaattt 195  Q
    |||||||||||| || |||||||| ||||||||||||||||| ||||||| | ||||||||||| ||||||||    
T  9434432 gaagtattatattatcatttatcatgttgttaattcaattttttaaaaattatttttataatatccgtaattt 9434360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 124 - 183
Target Start/End: Original strand, 39449415 - 39449474
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataa 183  Q
    ||||||||||||||| ||| |||| ||||||||||||||||| ||||||| |||||||||    
T  39449415 gaagtattatatgatcattaatcatgttgttaattcaattttttaaaaataattttataa 39449474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 12022386 - 12022337
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggagggctcac 63  Q
    ||||||||||||||||||||||| ||||||||| ||| ||||||||||||    
T  12022386 gggtgtgtttggattgagggtttaggaggggaaaggaggggagggctcac 12022337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 13404977 - 13405019
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggag 56  Q
    ||||||| ||||||||||||||| |||||||||||||||||||    
T  13404977 gggtgtggttggattgagggtttaggaggggaagggatgggag 13405019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 24243180 - 24243088
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    ||||||||||||||| |||||||| ||| ||| ||||||||| |||||  ||||||||| |  ||||||||| |||| |||||||||||| ||||    
T  24243180 gaagtattatatgatcatttatcatgttattatttcaatttt-taaaagacattttatagt-gtcgtaatttcaaaatgaaaagtaagtcatccc 24243088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 8815384 - 8815335
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggagggctcac 63  Q
    ||||||||||||||||||||||| ||||||| ||||| ||||||| ||||    
T  8815384 gggtgtgtttggattgagggtttaggagggggagggaggggagggttcac 8815335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 43732680 - 43732729
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggagggctcac 63  Q
    ||||||||||||||||||||||| |||||||||||||  ||||| |||||    
T  43732680 gggtgtgtttggattgagggtttaggaggggaagggagaggaggactcac 43732729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 31543315 - 31543271
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    |||||||||| |||||||||||| ||||||||||||| |||||||    
T  31543315 gggtgtgtttcgattgagggtttaggaggggaagggaggggaggg 31543271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 43732930 - 43732886
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    |||||||||||||| |||||||| ||||||||||||| |||||||    
T  43732930 gggtgtgtttggatggagggtttaggaggggaagggaggggaggg 43732886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 58
Target Start/End: Original strand, 1281149 - 1281188
Alignment:
Q  19 tgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  1281149 tgtttggattgagggtttaggaggggaagggatgagaggg 1281188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 16024155 - 16024202
Alignment:
Q  15 ggtgtgtttggattgagggttttggaggggaagggatgggagggctca 62  Q
    |||||||||||||||||||||| ||| ||||||||| ||||| |||||    
T  16024155 ggtgtgtttggattgagggtttaggaagggaagggaggggagagctca 16024202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 16652959 - 16652994
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaaggg 49  Q
    ||||||||||||||||||||||||||||||| ||||    
T  16652959 gggtgtgtttggattgagggttttggagggggaggg 16652994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 2248453 - 2248495
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggag 56  Q
    |||||||||||||||||| |||| ||||||||||||| |||||    
T  2248453 gggtgtgtttggattgagagtttaggaggggaagggaggggag 2248495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 55
Target Start/End: Complemental strand, 7394701 - 7394663
Alignment:
Q  17 tgtgtttggattgagggttttggaggggaagggatggga 55  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  7394701 tgtgtttggattgagggtttaggaggggaagggagggga 7394663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 9718722 - 9718681
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatggga 55  Q
    ||||||||||||||||||||||| ||||| ||||||| ||||    
T  9718722 gggtgtgtttggattgagggtttaggaggagaagggagggga 9718681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 3726864 - 3726900
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaaggga 50  Q
    |||||||||||||| |||||||| |||||||||||||    
T  3726864 gggtgtgtttggatggagggtttaggaggggaaggga 3726900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 50
Target Start/End: Complemental strand, 4247763 - 4247727
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaaggga 50  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  4247763 gggtgtgtttggattgaaggtttaggaggggaaggga 4247727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 7503197 - 7503153
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    ||||||||||||||||||| ||| |||||||| |||| |||||||    
T  7503197 gggtgtgtttggattgaggctttgggaggggaggggaggggaggg 7503153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 22591541 - 22591501
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattt 164  Q
    ||||||||||||||| |||||||| |||||| |||||||||    
T  22591541 gaagtattatatgatcatttatcatgttgttcattcaattt 22591501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 34634386 - 34634342
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    |||||||||||||| ||| |||| ||||||||||||||| |||||    
T  34634386 gggtgtgtttggatggagagtttaggaggggaagggatgtgaggg 34634342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 41103505 - 41103549
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    |||||||||||||| |||||||| |||||||||| || |||||||    
T  41103505 gggtgtgtttggatggagggtttaggaggggaagagaggggaggg 41103549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 1e-34; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 125 - 211
Target Start/End: Original strand, 42813732 - 42813818
Alignment:
Q  125 aagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaag 211  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  42813732 aagtattatatgattatttatcaggttgttaattcaattttctaaaaatcattttataatgttcgtaatttaaaaaagaaaaataag 42813818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 124 - 210
Target Start/End: Original strand, 45257418 - 45257504
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaa 210  Q
    ||||||||||||||| ||||||||  ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  45257418 gaagtattatatgatcatttatcatattgttaattcaattttcaaaaaatcattttataatatccgtaatttaaaaaagaaaagtaa 45257504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 124 - 211
Target Start/End: Complemental strand, 15085833 - 15085745
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaa-tttaaaaaagaaaagtaag 211  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||| |||||||||    
T  15085833 gaagtattatatgatcatttatcaagttgttaattcaattttctaaaaatcattttataatgtccgtaattttaaaaaaaaaaagtaag 15085745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 124 - 203
Target Start/End: Complemental strand, 3094486 - 3094407
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaaga 203  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||  ||||||||||||||||||    
T  3094486 gaagtattatatgattatttatcatgttgttaattcaattttctaagaatcattttataacgttcgtaatttaaaaaaga 3094407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 42296432 - 42296345
Alignment:
Q  128 tattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcct 215  Q
    ||||||||||| |||||| | |||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  42296432 tattatatgatcatttattatgttgttaattcatttttctaaaattcattttataatatccgtaatttaaaaaagaaaagtaagtcct 42296345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 36052220 - 36052126
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    ||||||| ||||||| || ||| | |||||||||||||||||||||||||||||||||||| |  ||||||||||| ||||||||||||| ||||    
T  36052220 gaagtatcatatgatcatgtatgatgttgttaattcaattttctaaaaatcattttataatgtatgtaatttaaaatagaaaagtaagtcgtccc 36052126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 9313114 - 9313185
Alignment:
Q  140 atttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaag 211  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |  |||||||||||| ||||||||||    
T  9313114 atttatcaagttgttaattcaattttcgaaaaatcattttataatgtctgtaatttaaaaaggaaaagtaag 9313185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 33265717 - 33265811
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    ||||||||||||||| ||||||||  ||||||||||||||||| ||||||||||||| | | ||| |||||||||||| |||||  |||||||||    
T  33265717 gaagtattatatgatcatttatcatattgttaattcaattttcaaaaaatcattttacattgttcataatttaaaaaataaaagcgagtcctccc 33265811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 124 - 216
Target Start/End: Original strand, 21502144 - 21502236
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctc 216  Q
    ||||||||||||||  |||||||  ||||||||| ||||||||| ||||| |||||||||||| |||| |||||||||||||| || ||||||    
T  21502144 gaagtattatatgaccatttatcttgttgttaatgcaattttcttaaaattattttataatatccgtagtttaaaaaagaaaactatgtcctc 21502236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 1052884 - 1052801
Alignment:
Q  128 tattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaa-aaaagaaaagtaa 210  Q
    ||||||| ||| |||||||| ||||||||||||||||||||||||| ||||||||||||   |||||||| |||||||||||||    
T  1052884 tattatacgatcatttatcatgttgttaattcaattttctaaaaattattttataatatcgataatttaaaaaaagaaaagtaa 1052801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 128 - 218
Target Start/End: Original strand, 31061474 - 31061565
Alignment:
Q  128 tattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaattt-aaaaaagaaaagtaagtcctccc 218  Q
    ||||||||||| |||||||| |||||||||||||||||| |||| ||| |||||||| |  ||||||| ||||||||||||||| |||||||    
T  31061474 tattatatgatcatttatcatgttgttaattcaattttcaaaaagtcactttataatgtctgtaatttaaaaaaagaaaagtaaatcctccc 31061565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 124 - 207
Target Start/End: Original strand, 35325380 - 35325463
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaag 207  Q
    ||||||||||||||| |||||||| ||| ||||||||||||| ||||||| |||||||||| |   ||||||||||| ||||||    
T  35325380 gaagtattatatgatcatttatcatgttattaattcaattttttaaaaattattttataatgtcgttaatttaaaaaggaaaag 35325463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 124 - 199
Target Start/End: Original strand, 45098280 - 45098355
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaa 199  Q
    ||||||||||||||| |||||||| |||||||||||||||||  ||||| ||||||||||| |  |||||||||||    
T  45098280 gaagtattatatgatcatttatcatgttgttaattcaatttttcaaaaaccattttataatgtctgtaatttaaaa 45098355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 22356140 - 22356197
Alignment:
Q  150 ttgttaattcaattttctaaaaatcattttat-aatattcgtaatttaaaaaagaaaa 206  Q
    |||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||    
T  22356140 ttgttaattcaattttctaaaaatcattttataaatgtccgtaatttaaaaaagaaaa 22356197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 34187695 - 34187748
Alignment:
Q  131 tatatgattatttatcaagttgttaattcaattttctaaaaatcattttataat 184  Q
    ||||| || |||||||| ||||||||||||||||||||||||||||||||||||    
T  34187695 tatataatcatttatcatgttgttaattcaattttctaaaaatcattttataat 34187748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 206
Target Start/End: Original strand, 16713652 - 16713718
Alignment:
Q  140 atttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaa 206  Q
    |||| ||| ||| ||||||||||||||||||||| |||||||||||| |||| ||| ||||||||||    
T  16713652 atttctcatgttattaattcaattttctaaaaattattttataatatccgtagttttaaaaagaaaa 16713718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 205
Target Start/End: Complemental strand, 8554432 - 8554351
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaa 205  Q
    |||||||| || ||| |||||||| | |||||||||||||||  |||||| |||||||||| | |||||||| |||||||||    
T  8554432 gaagtattgtacgatcatttatcatgatgttaattcaatttttaaaaaattattttataatgtccgtaatttgaaaaagaaa 8554351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 31061360 - 31061409
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggagggctcac 63  Q
    ||||||||||||||||| ||||| ||||||||| ||||||||||||||||    
T  31061360 gggtgtgtttggattgaaggtttaggaggggaaaggatgggagggctcac 31061409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 17379847 - 17379891
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||    
T  17379847 gggtgtgtttggattgagggtttaggaggggaagggaggggaggg 17379891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 180
Target Start/End: Complemental strand, 31928177 - 31928121
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcatttta 180  Q
    ||||||||||||||| |||||||| ||| |||||||||||||  |||||||||||||    
T  31928177 gaagtattatatgatcatttatcatgttattaattcaattttaaaaaaatcatttta 31928121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 35736176 - 35736220
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||    
T  35736176 gggtgtgtttggattgagggtttaggaggggaagggaggggaggg 35736220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 187
Target Start/End: Complemental strand, 2381120 - 2381057
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatatt 187  Q
    |||||||||||| || ||  |||| ||||| ||||||||||||||||| |||||||||||||||    
T  2381120 gaagtattatatcatcatcaatcatgttgtcaattcaattttctaaaattcattttataatatt 2381057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 218
Target Start/End: Original strand, 14196823 - 14196874
Alignment:
Q  167 taaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    |||||| ||||||||| | |||||||||||||||||||||||||| ||||||    
T  14196823 taaaaaacattttatagtgttcgtaatttaaaaaagaaaagtaagccctccc 14196874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 31795902 - 31795808
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    |||||||||||||||  ||||||| ||||||| || | ||||  ||||| | ||| ||| | | ||||||||||||| |||||||||||||||||    
T  31795902 gaagtattatatgatcgtttatcatgttgttattttattttttaaaaaaacttttcatagtgtccgtaatttaaaaacgaaaagtaagtcctccc 31795808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 36347784 - 36347742
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggag 56  Q
    ||||||||||||||||||||||| ||||||||||||| |||||    
T  36347784 gggtgtgtttggattgagggtttaggaggggaagggaagggag 36347742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 23748338 - 23748289
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggagggctcac 63  Q
    |||||||||||||| |||||||| ||||||||||||| ||||||| ||||    
T  23748338 gggtgtgtttggatggagggtttaggaggggaagggaggggagggttcac 23748289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 35736430 - 35736381
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggagggctcac 63  Q
    |||||||||||||| |||||||| ||||| ||||||| ||||||||||||    
T  35736430 gggtgtgtttggatggagggtttaggaggtgaagggaggggagggctcac 35736381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 22356247 - 22356203
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    ||||||||||||||||||| ||| ||||||||||||| |||||||    
T  22356247 gggtgtgtttggattgaggatttaggaggggaagggaggggaggg 22356203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 31928286 - 31928243
Alignment:
Q  20 gtttggattgagggttttggaggggaagggatgggagggctcac 63  Q
    |||||||| |||||||| ||||||||||||| ||||||||||||    
T  31928286 gtttggatcgagggtttaggaggggaagggaagggagggctcac 31928243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 41841684 - 41841727
Alignment:
Q  15 ggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    |||||||||||||||||| ||| |||||| ||||||||||||||    
T  41841684 ggtgtgtttggattgaggatttaggagggaaagggatgggaggg 41841727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 36046443 - 36046401
Alignment:
Q  15 ggtgtgtttggattgagggttttggaggggaagggatgggagg 57  Q
    ||||||||||||||||||||||  |||||||||||| ||||||    
T  36046443 ggtgtgtttggattgagggtttatgaggggaagggaggggagg 36046401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 14187162 - 14187113
Alignment:
Q  169 aaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    |||| ||||||||||| ||  |||||||||||||||||||||| ||||||    
T  14187162 aaaaacattttataatgtttataatttaaaaaagaaaagtaagccctccc 14187113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 47
Target Start/End: Complemental strand, 17380084 - 17380051
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaag 47  Q
    ||||||||||||||||||||||| ||||||||||    
T  17380084 gggtgtgtttggattgagggtttaggaggggaag 17380051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 42296546 - 42296497
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggagggctcac 63  Q
    |||||||||||||||||||| || ||||||||||||| | ||||| ||||    
T  42296546 gggtgtgtttggattgagggattaggaggggaagggaggagagggttcac 42296497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 45257308 - 45257357
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggagggctcac 63  Q
    |||||||||||||||||| |||| ||||||||| ||| |||||| |||||    
T  45257308 gggtgtgtttggattgagagtttaggaggggaaaggaagggaggactcac 45257357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 41778774 - 41778818
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    ||||||||||||||||||||||| | |||| |||||| |||||||    
T  41778774 gggtgtgtttggattgagggtttagaagggaaagggaggggaggg 41778818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 124 - 210
Target Start/End: Original strand, 17651 - 17737
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaa 210  Q
    |||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  17651 gaagtattatatgattatttatcatgttgctaattcaattttcaaaaaatcattttataatatttgtaatttaaaaaagaaaagtaa 17737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 3e-32; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 28074236 - 28074142
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||| |||||    
T  28074236 gaagtattatatgatcatttatcaggttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaagtgagttctccc 28074142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 36267686 - 36267592
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    ||||||||||||||| ||||||||  ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||    
T  36267686 gaagtattatatgatcatttatcatattgttgattcaattttctaaaaatcattttataatatccgtaatttaaaaaagaaaactaagccctccc 36267592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 124 - 210
Target Start/End: Original strand, 33519159 - 33519245
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaa 210  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |  |||||||||| |||||||||||    
T  33519159 gaagtattatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtctgtaatttaaagaagaaaagtaa 33519245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 21857462 - 21857549
Alignment:
Q  128 tattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctc 216  Q
    |||| |||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||    
T  21857462 tattgtatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgttcgtaa-ttaaaagagaaaagtaagtcctc 21857549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 124 - 210
Target Start/End: Original strand, 35422075 - 35422161
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaa 210  Q
    ||||||| |||||||||||||| | ||||||||||||||||||||||||| |||||||||| | |||||||| ||||||||||||||    
T  35422075 gaagtatcatatgattatttattatgttgttaattcaattttctaaaaattattttataatgtccgtaattttaaaaagaaaagtaa 35422161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 137 - 213
Target Start/End: Complemental strand, 2087859 - 2087783
Alignment:
Q  137 attatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtc 213  Q
    ||||||||||| |||||||||||| |||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  2087859 attatttatcatgttgttaattcatttttttaaaaattattttataatatccgtaatttaaaaaagaaaagtaagtc 2087783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 124 - 211
Target Start/End: Complemental strand, 48881691 - 48881604
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaag 211  Q
    |||| ||||||| || |||||||| ||||||||||||||||||| ||||| |||||||||| | ||||||||||||||||||||||||    
T  48881691 gaagcattatataatcatttatcatgttgttaattcaattttctgaaaattattttataatgtccgtaatttaaaaaagaaaagtaag 48881604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 3215993 - 3215900
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    ||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||  || ||||||| |||||||||| |||| ||||||    
T  3215993 gaagtattatatgatcatttatcatattgttaattcaattttctaaaaatcattttataa-gtttgtaatttgaaaaagaaaactaagccctccc 3215900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 39646580 - 39646674
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    |||||||||||| || ||  |||| |||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||| |||| ||||    
T  39646580 gaagtattatatcatcatcaatcatgttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaataaaagtgagtcatccc 39646674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 30592386 - 30592292
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    ||||||||||||||||||||||||  |  ||| ||||||||| |||||||||||||||| | |  ||||||||||||||||||||||| ||||||    
T  30592386 gaagtattatatgattatttatcatatgattatttcaattttttaaaaatcattttatagtgtctgtaatttaaaaaagaaaagtaagccctccc 30592292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 37925952 - 37926046
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    |||||||||||| || ||  |||| |||||||||||||||||||||| ||||||||||||| | ||||||||| ||||||||| | |||||||||    
T  37925952 gaagtattatatcatcatcaatcatgttgttaattcaattttctaaacatcattttataatgtccgtaatttagaaaagaaaaatgagtcctccc 37926046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 124 - 207
Target Start/End: Original strand, 37620885 - 37620968
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaag 207  Q
    |||||||||||| ||  ||||||| |||| ||||||||||||| ||||||||||||||||| | | ||||||||||||||||||    
T  37620885 gaagtattatataatcttttatcatgttgataattcaattttccaaaaatcattttataatgtccataatttaaaaaagaaaag 37620968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 48015323 - 48015405
Alignment:
Q  129 attatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaag 211  Q
    |||||||||| |||||||| |||||||||||||||||| |||||| |||||||||  |  |||||||||||| ||||||||||    
T  48015323 attatatgatcatttatcatgttgttaattcaattttccaaaaattattttataaagtctgtaatttaaaaacgaaaagtaag 48015405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 211
Target Start/End: Complemental strand, 31364175 - 31364091
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaag 211  Q
    ||||||||||||||| ||||||   || ||| |||||||||||| |||||||||||||||| | ||||||||| ||||||||||||||    
T  31364175 gaagtattatatgatcatttat---gtcgttgattcaattttcttaaaatcattttataatgtccgtaatttagaaaagaaaagtaag 31364091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 48013622 - 48013701
Alignment:
Q  132 atatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaag 211  Q
    ||||||| |||||||| ||||||||||||||||||||||||| |||||||||  |  || ||||||||| ||||||||||    
T  48013622 atatgatcatttatcatgttgttaattcaattttctaaaaattattttataaagtctgtgatttaaaaacgaaaagtaag 48013701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 125 - 218
Target Start/End: Original strand, 48094005 - 48094098
Alignment:
Q  125 aagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    |||||||||||||| ||||||||  || ||| ||||||| | ||||||  ||||||||   ||||||||||||||||||||||||| |||||||    
T  48094005 aagtattatatgatcatttatcattttattatttcaattctataaaaaagattttatagcgttcgtaatttaaaaaagaaaagtaaatcctccc 48094098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 36267796 - 36267748
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggagggctca 62  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  36267796 gggtgtgtttggattgagggtttaggaggggaagggaggggagggctca 36267748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 8122264 - 8122319
Alignment:
Q  129 attatatgattatttatcaagttgttaattcaattttctaaaaatcattttataat 184  Q
    |||||||||| ||||||||  |||||||||||||||||||||||| ||||||||||    
T  8122264 attatatgataatttatcatcttgttaattcaattttctaaaaattattttataat 8122319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 37925842 - 37925891
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggagggctcac 63  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||| ||||    
T  37925842 gggtgtgtttggattgagggtttaggaggggaagggaggggagggttcac 37925891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 216
Target Start/End: Original strand, 16833806 - 16833901
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataat--attc-gtaatttaaaaaagaaaagtaagtcctc 216  Q
    ||||||||| ||||| |||||||| ||| ||||||||||||| ||||||| || |||||||  | || ||||||| |||||||||||||| |||||    
T  16833806 gaagtattacatgatcatttatcatgttattaattcaattttataaaaattatattataatgaagtctgtaattttaaaaagaaaagtaactcctc 16833901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 39856108 - 39856064
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||    
T  39856108 gggtgtgtttggattgagggtttaggaggggaagggaggggaggg 39856064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 23116393 - 23116298
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatca-ttttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    |||||||||||| || |||||||| |||| || ||||||||| ||| || || ||||||| | |  ||||||||||||||||||||||| ||||||    
T  23116393 gaagtattatataatcatttatcatgttgctatttcaattttttaataaacacttttatagtgtctgtaatttaaaaaagaaaagtaagccctccc 23116298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 210
Target Start/End: Complemental strand, 32872863 - 32872828
Alignment:
Q  175 attttataatattcgtaatttaaaaaagaaaagtaa 210  Q
    ||||||||||||||||||||||||||||||||||||    
T  32872863 attttataatattcgtaatttaaaaaagaaaagtaa 32872828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 36267554 - 36267600
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggagggct 60  Q
    |||||||||||||| |||||||| ||||||||||||| |||||||||    
T  36267554 gggtgtgtttggatggagggtttaggaggggaagggaggggagggct 36267600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 7791831 - 7791888
Alignment:
Q  125 aagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttata 182  Q
    ||||||||||||||||||||||| ||| ||| |||||||||| |||||  ||||||||    
T  7791831 aagtattatatgattatttatcatgtttttatttcaattttcaaaaaagtattttata 7791888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 218
Target Start/End: Complemental strand, 12670633 - 12670572
Alignment:
Q  157 ttcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    ||||||||||||| ||| || |||||| ||  ||||||||||||||||||||| ||||||||    
T  12670633 ttcaattttctaacaattatattataaaatctgtaatttaaaaaagaaaagtatgtcctccc 12670572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 165
Target Start/End: Complemental strand, 12670969 - 12670928
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaatttt 165  Q
    ||||||||||||||| |||||||| |||||||||||||||||    
T  12670969 gaagtattatatgatcatttatcatgttgttaattcaatttt 12670928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 37620776 - 37620817
Alignment:
Q  15 ggtgtgtttggattgagggttttggaggggaagggatgggag 56  Q
    |||||||||||||||||||||| ||||||||||||| |||||    
T  37620776 ggtgtgtttggattgagggtttgggaggggaagggaggggag 37620817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 50
Target Start/End: Complemental strand, 1051741 - 1051705
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaaggga 50  Q
    ||||||||||||||||||||||| |||||||||||||    
T  1051741 gggtgtgtttggattgagggtttaggaggggaaggga 1051705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 33519291 - 33519247
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    |||||||||||||| |||||||| ||||||||||||| |||||||    
T  33519291 gggtgtgtttggatggagggtttaggaggggaagggaggggaggg 33519247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 3143591 - 3143675
Alignment:
Q  124 gaagtattatatgattatttatcaagttg----ttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaa 204  Q
    ||||||||||||||| ||||||||  |||    ||||||||||||| ||||||| |||||||||| |   |||||||||||||||    
T  3143591 gaagtattatatgatcatttatcattttgttaattaattcaattttttaaaaattattttataatgtcattaatttaaaaaagaa 3143675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 13770949 - 13770992
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggagg 57  Q
    ||||||||||||||||||| ||| ||||||||||||| ||||||    
T  13770949 gggtgtgtttggattgaggatttaggaggggaagggaggggagg 13770992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 25887193 - 25887236
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggagg 57  Q
    |||||||||||||||||||||||  |||||||||||| ||||||    
T  25887193 gggtgtgtttggattgagggtttatgaggggaagggaggggagg 25887236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 28074104 - 28074146
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggag 56  Q
    ||||||||||||||||| ||||| ||||||||||||| |||||    
T  28074104 gggtgtgtttggattgaaggtttaggaggggaagggaggggag 28074146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 31364285 - 31364251
Alignment:
Q  16 gtgtgtttggattgagggttttggaggggaaggga 50  Q
    ||||||||||||||||||||| |||||||||||||    
T  31364285 gtgtgtttggattgagggtttaggaggggaaggga 31364251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 31571713 - 31571671
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggag 56  Q
    ||||||||||||||||||||||| |||||||||| || |||||    
T  31571713 gggtgtgtttggattgagggtttaggaggggaagcgaggggag 31571671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 48881559 - 48881605
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggagggct 60  Q
    |||||||||||||| |||||||| ||||||||||||| |||| ||||    
T  48881559 gggtgtgtttggatggagggtttaggaggggaagggaggggatggct 48881605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 48881792 - 48881758
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagg 48  Q
    ||||||||||||||||||||||| |||||||||||    
T  48881792 gggtgtgtttggattgagggtttaggaggggaagg 48881758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 28074351 - 28074302
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggagggctcac 63  Q
    ||||||||||||||||||||||| |||| |||||| | ||||||| ||||    
T  28074351 gggtgtgtttggattgagggtttaggagaggaaggaaggggagggatcac 28074302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 33519053 - 33519098
Alignment:
Q  18 gtgtttggattgagggttttggaggggaagggatgggagggctcac 63  Q
    |||||||||| |||| ||| ||||||||||||| ||||||||||||    
T  33519053 gtgtttggatggaggttttaggaggggaagggaggggagggctcac 33519098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 41496958 - 41496999
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatggga 55  Q
    |||||||||||||| |||||||| ||||||||||||| ||||    
T  41496958 gggtgtgtttggatggagggtttaggaggggaagggagggga 41496999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 4833532 - 4833576
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    |||| ||||||||| |||||||| ||||||||||||| |||||||    
T  4833532 gggtatgtttggatggagggtttaggaggggaagggaggggaggg 4833576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 50
Target Start/End: Complemental strand, 13771189 - 13771153
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaaggga 50  Q
    |||||||||| |||||||||||| |||||||||||||    
T  13771189 gggtgtgtttagattgagggtttaggaggggaaggga 13771153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 40196533 - 40196569
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaaggga 50  Q
    |||||||||||||| |||||||| |||||||||||||    
T  40196533 gggtgtgtttggatggagggtttgggaggggaaggga 40196569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 40282198 - 40282234
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaaggga 50  Q
    |||| |||||||||||||||||| |||||||||||||    
T  40282198 gggtatgtttggattgagggtttaggaggggaaggga 40282234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 47390856 - 47390892
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaaggga 50  Q
    |||||||||||||||||||| || |||||||||||||    
T  47390856 gggtgtgtttggattgaggggttaggaggggaaggga 47390892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 3e-32; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 22186830 - 22186924
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    |||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||    
T  22186830 gaagtattatataatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaagtgagtcctccc 22186924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 55080690 - 55080784
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    |||||||| |||||| |||||||| |||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  55080690 gaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgttcgtaatttaaaaaagaaaagtaagtcctccc 55080784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 43961521 - 43961615
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    ||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||| ||||||    
T  43961521 gaagtattatatgatcatttatcatgttgataattcaattttctaaaaatcattttataatgttcataatttaaaaaagaaaaataagccctccc 43961615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 4437558 - 4437464
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    ||||||||||||||| | |||||| ||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||| |||||| ||||    
T  4437558 gaagtattatatgatcaattatcatgttgttaattcaattttttaaaaatcattttataatatccataatttaaaaaagaaaaataagtcatccc 4437464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 124 - 213
Target Start/End: Original strand, 34995162 - 34995249
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtc 213  Q
    ||||||||||| |||||||||||| |||  ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  34995162 gaagtattataagattatttatcatgtt--taattcaattttctaaaaatcatttgataatatccgtaatttaaaaaagaaaagtaagtc 34995249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 54576460 - 54576366
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    |||||||||||| || |||||||| |||||||||||||||||||| ||||||||||||||| | |||||| ||||||||||||||||| ||||||    
T  54576460 gaagtattatataatcatttatcacgttgttaattcaattttctataaatcattttataatgtccgtaatctaaaaaagaaaagtaagccctccc 54576366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 7977629 - 7977534
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaa-aaaagaaaagtaagtcctccc 218  Q
    ||||||||||||||| |||||||| |||||||||||||||||| ||| || |||||||||| |||||||||||| |||||||||||||| ||||||    
T  7977629 gaagtattatatgatcatttatcatgttgttaattcaattttcaaaatattattttataatgttcgtaatttaaaaaaagaaaagtaagccctccc 7977534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 130 - 216
Target Start/End: Original strand, 5825013 - 5825099
Alignment:
Q  130 ttatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctc 216  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |  |||||| ||||||||||||||| |||||    
T  5825013 ttatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtctgtaattcaaaaaagaaaagtaaatcctc 5825099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 37761575 - 37761669
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    ||||| |||||| || |||||||| |||||||||||||||||||||||||||||| ||||| | | |||||||||||||||||| ||| ||||||    
T  37761575 gaagtgttatataatcatttatcatgttgttaattcaattttctaaaaatcatttcataatgtccataatttaaaaaagaaaaggaagccctccc 37761669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 124 - 210
Target Start/End: Complemental strand, 47846188 - 47846102
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaa 210  Q
    |||||||||||||||||||||||| ||| ||||||||||||| ||||||| |||||||||| | |  ||||||||||||||||||||    
T  47846188 gaagtattatatgattatttatcatgttcttaattcaattttgtaaaaattattttataatgtccagaatttaaaaaagaaaagtaa 47846102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 206
Target Start/End: Complemental strand, 29993904 - 29993822
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaa 206  Q
    |||||||||||| || ||  |||| |||||||||||||||||||||||||||||||||| | | |||||||||||||||||||    
T  29993904 gaagtattatatcatcatcaatcatgttgttaattcaattttctaaaaatcattttatagtgtccgtaatttaaaaaagaaaa 29993822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 124 - 211
Target Start/End: Complemental strand, 54001236 - 54001152
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaag 211  Q
    ||||||||||||||| ||||||||   ||||||||||||||| ||||||| |||||||||| | |||||||||||||| |||||||||    
T  54001236 gaagtattatatgatcatttatca---tgttaattcaattttttaaaaattattttataatgtccgtaatttaaaaaacaaaagtaag 54001152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 124 - 211
Target Start/End: Original strand, 51329906 - 51329992
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaag 211  Q
    |||||||||||| || ||||||||  ||||||||||||||||||| |||| |||||||||||| | |||||||||||| |||||||||    
T  51329906 gaagtattatataatcatttatcattttgttaattcaattttctataaattattttataatatccctaatttaaaaaa-aaaagtaag 51329992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 124 - 210
Target Start/End: Original strand, 11089627 - 11089713
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaa 210  Q
    |||||| |||||||| |||||| | ||||||||||||||||||||||||  |||||||||  | |||||||||||||||||| ||||    
T  11089627 gaagtaatatatgatcatttatgatgttgttaattcaattttctaaaaaatattttataaagtccgtaatttaaaaaagaaatgtaa 11089713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 206
Target Start/End: Original strand, 14539383 - 14539465
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaa 206  Q
    ||||||||||||||| |||||| | ||| |||||| |||||||||| || ||||||||||| ||||||||||| |||| ||||    
T  14539383 gaagtattatatgatcatttattatgttcttaatttaattttctaacaaacattttataatgttcgtaatttataaaaaaaaa 14539465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 21695022 - 21694929
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    ||||||||||||||| ||| ||||  |||||| ||||||||  |||||| ||||||||| | | |||||||||||||||||||||||| ||||||    
T  21695022 gaagtattatatgatcatt-atcattttgttatttcaatttattaaaaaccattttatagtgtccgtaatttaaaaaagaaaagtaagccctccc 21694929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 124 - 210
Target Start/End: Complemental strand, 17182618 - 17182530
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaatttt--ctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaa 210  Q
    ||||||||||||||| ||||||||  ||||||||||||||||  | ||||||||||||||||  |   |||||||||||||||||||||    
T  17182618 gaagtattatatgatcatttatcatattgttaattcaatttttgcaaaaaatcattttataacgtcaataatttaaaaaagaaaagtaa 17182530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 35543411 - 35543346
Alignment:
Q  153 ttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    ||||||||||||| ||||||| |||||||||| ||| ||||||||||||||||| ||||| |||||    
T  35543411 ttaattcaattttttaaaaattattttataatgttcctaatttaaaaaagaaaaataagttctccc 35543346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 51075215 - 51075271
Alignment:
Q  131 tatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatatt 187  Q
    |||||||| |||||||| ||||||||||||||||| ||||||| |||||||||||||    
T  51075215 tatatgatcatttatcatgttgttaattcaattttttaaaaattattttataatatt 51075271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 44145842 - 44145936
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    ||||||||| ||||| |||||| | | ||||||||||||||| |||||||||||||||||| |   ||| ||||||||| || ||||| ||||||    
T  44145842 gaagtattacatgatcatttataatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctccc 44145936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 49735469 - 49735518
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggagggctcac 63  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||| ||||    
T  49735469 gggtgtgtttggattgagggtttaggaggggaagggaggggagggttcac 49735518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 37711139 - 37711183
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||    
T  37711139 gggtgtgtttggattgagggtttaggaggggaagggaagggaggg 37711183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 49735735 - 49735691
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||    
T  49735735 gggtgtgtttggattgagggtttaggaggggaagggaggggaggg 49735691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 54320677 - 54320633
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||    
T  54320677 gggtgtgtttggattgagggtttaggaggggaagggaggggaggg 54320633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 200
Target Start/End: Original strand, 55510281 - 55510356
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaa 200  Q
    ||||||||||||||| ||| |||| ||||||| ||||||||| | ||||| |||||||| | |||||||||||||||    
T  55510281 gaagtattatatgatcattcatcatgttgttatttcaatttttttaaaat-attttatagtgttcgtaatttaaaaa 55510356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 56135750 - 56135794
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||    
T  56135750 gggtgtgtttggattgagggtttaggaggggaagggaggggaggg 56135794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 184
Target Start/End: Original strand, 9030328 - 9030387
Alignment:
Q  125 aagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataat 184  Q
    ||||||||||| || ||||||||  || |||||| |||||||||||||||||||||||||    
T  9030328 aagtattatataatcatttatcattttattaattaaattttctaaaaatcattttataat 9030387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 58
Target Start/End: Complemental strand, 46007942 - 46007900
Alignment:
Q  16 gtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    ||||||||||||||||||||| ||||||||||||| |||||||    
T  46007942 gtgtgtttggattgagggtttaggaggggaagggaggggaggg 46007900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 50
Target Start/End: Complemental strand, 1968602 - 1968566
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaaggga 50  Q
    ||||||||||||||||||||||| |||||||||||||    
T  1968602 gggtgtgtttggattgagggtttaggaggggaaggga 1968566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 31348564 - 31348520
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    |||||||||||||||||| |||| ||||||||||||| |||||||    
T  31348564 gggtgtgtttggattgagagtttaggaggggaagggaggggaggg 31348520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 37711366 - 37711322
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    |||||||||||||| |||||||| ||||||||||||| |||||||    
T  37711366 gggtgtgtttggatggagggtttaggaggggaagggaggggaggg 37711322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 54935068 - 54935104
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaaggga 50  Q
    ||||||||||||||||||||||| |||||||||||||    
T  54935068 gggtgtgtttggattgagggtttaggaggggaaggga 54935104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 54935312 - 54935268
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    |||||||||||||| |||||||| ||||||||||||| |||||||    
T  54935312 gggtgtgtttggatggagggtttaggaggggaagggaggggaggg 54935268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 47846298 - 47846255
Alignment:
Q  15 ggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    ||||||||||||||||||||||  |||| |||||||||||||||    
T  47846298 ggtgtgtttggattgagggtttaagaggagaagggatgggaggg 47846255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 210
Target Start/End: Complemental strand, 24565479 - 24565393
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaa 210  Q
    ||||||||||||| || ||||||| |||  ||| | || ||| |||||| |||||  |||||| ||||||||||||| |||||||||    
T  24565479 gaagtattatatgtttgtttatcacgttaataagttaactttttaaaaagcatttcgtaatatccgtaatttaaaaatgaaaagtaa 24565393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 26166938 - 26166980
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggag 56  Q
    ||||||||||||||||||||||| ||||||||| ||| |||||    
T  26166938 gggtgtgtttggattgagggtttaggaggggaatggaggggag 26166980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 6938401 - 6938442
Alignment:
Q  167 taaaaatcattttataatattcgtaatttaaaaaagaaaagt 208  Q
    |||||| ||||||||||||| ||||||||||||| |||||||    
T  6938401 taaaaaacattttataatatccgtaatttaaaaatgaaaagt 6938442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 41174588 - 41174547
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatggga 55  Q
    |||||||||||||| |||||||| ||||||||||||| ||||    
T  41174588 gggtgtgtttggatggagggtttaggaggggaagggagggga 41174547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 44145774 - 44145823
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggagggctcac 63  Q
    ||||||||||||||| | ||||| ||||||||||||| |||||| |||||    
T  44145774 gggtgtgtttggattcaaggtttaggaggggaagggaggggaggactcac 44145823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 45911362 - 45911325
Alignment:
Q  175 attttataatattcgtaatttaaaaaagaaaagtaagt 212  Q
    |||||||| ||| |||||||||||||||||||||||||    
T  45911362 attttatagtatccgtaatttaaaaaagaaaagtaagt 45911325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 54576329 - 54576374
Alignment:
Q  15 ggtgtgtttggattgagggttttggaggggaagggatgggagggct 60  Q
    ||||||||||||| |||||||| | ||||||||||| |||||||||    
T  54576329 ggtgtgtttggatggagggtttagaaggggaagggaggggagggct 54576374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 171
Target Start/End: Original strand, 56135860 - 56135904
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaa 171  Q
    ||||||||||||||| ||||||||   |||||||||||||||||||||    
T  56135860 gaagtattatatgatcatttatca---tgttaattcaattttctaaaa 56135904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 5730831 - 5730875
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    |||||||||||||| |||||||| |||||| ||| ||||||||||    
T  5730831 gggtgtgtttggatggagggtttaggagggaaagagatgggaggg 5730875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 5731072 - 5731032
Alignment:
Q  16 gtgtgtttggattgagggttttggaggggaagggatgggag 56  Q
    ||||||||| ||||||||||| ||||||||||||| |||||    
T  5731072 gtgtgtttgaattgagggtttaggaggggaagggaggggag 5731032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 5824902 - 5824934
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaa 46  Q
    ||||||||||||||||||||||||||| |||||    
T  5824902 gggtgtgtttggattgagggttttggaagggaa 5824934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 7977740 - 7977696
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    |||||||||||||||||||||||  |||||||| ||| |||||||    
T  7977740 gggtgtgtttggattgagggtttatgaggggaaaggaggggaggg 7977696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 218
Target Start/End: Original strand, 17182658 - 17182690
Alignment:
Q  186 ttcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    |||||||||||||||| ||||||||||||||||    
T  17182658 ttcgtaatttaaaaaataaaagtaagtcctccc 17182690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 35565565 - 35565605
Alignment:
Q  20 gtttggattgagggttttggaggggaagggatgggagggct 60  Q
    ||||||||||||||||| | ||||||||||| |||||||||    
T  35565565 gtttggattgagggtttagcaggggaagggaggggagggct 35565605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 36151577 - 36151621
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    |||||| |||| |||||||||||||||||||||| |||| |||||    
T  36151577 gggtgtatttgaattgagggttttggaggggaagagatgagaggg 36151621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 45741891 - 45741923
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaa 46  Q
    ||||||||||||||||||||||| |||||||||    
T  45741891 gggtgtgtttggattgagggtttaggaggggaa 45741923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 53260719 - 53260755
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaaggga 50  Q
    |||||||||||||| |||||||| |||||||||||||    
T  53260719 gggtgtgtttggatggagggtttaggaggggaaggga 53260755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 54320436 - 54320472
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaaggga 50  Q
    ||||||||||||||||||||||| |||||| ||||||    
T  54320436 gggtgtgtttggattgagggtttaggagggaaaggga 54320472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 1e-31; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 124 - 217
Target Start/End: Complemental strand, 40709425 - 40709332
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctcc 217  Q
    ||||||||||||||| ||||||||  | ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  40709425 gaagtattatatgatcatttatcatatcgttaatttaattttctaaaaattattttataatattcgtaatttaaaaaagaaaagtaagtcctcc 40709332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 125 - 218
Target Start/End: Original strand, 35512909 - 35513002
Alignment:
Q  125 aagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| | | |||||||||||| ||||||||| ||||||    
T  35512909 aagtattatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtccataatttaaaaaataaaagtaagccctccc 35513002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 1085623 - 1085528
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaa-gaaaagtaagtcctccc 218  Q
    ||||||||||||||| |||||||| | ||||| ||||||||||||||||||||||| |||| | |||||||||||||| |||||||||||||||||    
T  1085623 gaagtattatatgatcatttatcatgctgttagttcaattttctaaaaatcattttctaatgtccgtaatttaaaaaaggaaaagtaagtcctccc 1085528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 124 - 210
Target Start/End: Original strand, 25268375 - 25268461
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaa 210  Q
    ||||||||||||||| |||||||| |||||| ||| ||||||||||||||||||||||||| | ||||||||||||||| |||||||    
T  25268375 gaagtattatatgatcatttatcacgttgttgattaaattttctaaaaatcattttataatttccgtaatttaaaaaaggaaagtaa 25268461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 128 - 218
Target Start/End: Original strand, 47071166 - 47071256
Alignment:
Q  128 tattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    |||| |||||| |||||||| |||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||| |||| ||||    
T  47071166 tattttatgatcatttatcatgttgttaattaaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaagttagtcttccc 47071256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 124 - 210
Target Start/End: Original strand, 35927924 - 35928009
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaa 210  Q
    ||||||||||||||| |||||||| ||||||||||||||||||| ||||| ||||||||| ||  ||||||||||||||||||||||    
T  35927924 gaagtattatatgatcatttatcatgttgttaattcaattttct-aaaattattttataaaatctgtaatttaaaaaagaaaagtaa 35928009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 127 - 210
Target Start/End: Complemental strand, 13387049 - 13386966
Alignment:
Q  127 gtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaa 210  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||| |||||| || | | ||||| |||||||||||||||    
T  13387049 gtattatatgatcatttatcatgttgttaattcaattttctaaaaatcgttttatgatgtccataattaaaaaaagaaaagtaa 13386966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 124 - 213
Target Start/End: Original strand, 2506650 - 2506739
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtc 213  Q
    ||||||||||||||| |||||| |  |||||||||| ||||| ||||||| ||||||||||||  |||||||||||||||||| ||||||    
T  2506650 gaagtattatatgatcatttattatattgttaattcgattttttaaaaattattttataatatctgtaatttaaaaaagaaaactaagtc 2506739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 124 - 205
Target Start/End: Original strand, 33643379 - 33643460
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaa 205  Q
    ||||||||||||||| ||| ||||  || |||||||||||||||||||||||||||| ||| ||| ||||||||||||||||    
T  33643379 gaagtattatatgatcattcatcatattattaattcaattttctaaaaatcattttaaaatgttcataatttaaaaaagaaa 33643460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 1344666 - 1344741
Alignment:
Q  131 tatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaa 206  Q
    |||||| |||||||||| ||||||  |||||||||||||||||||||||| ||| | |||||||||||||||||||    
T  1344666 tatatgtttatttatcatgttgttggttcaattttctaaaaatcattttacaatgtccgtaatttaaaaaagaaaa 1344741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 51303517 - 51303423
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    ||||||||||||||| |||||||| |||||||||||||||||  ||||||||||||| | | || ||||| ||||||| |||||| || ||||||    
T  51303517 gaagtattatatgatcatttatcatgttgttaattcaattttaaaaaaatcattttacattgttggtaatataaaaaataaaagtgagccctccc 51303423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 210
Target Start/End: Complemental strand, 525232 - 525148
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaa 210  Q
    |||||||||||| || ||||||||  |||||||||||| ||||||||||| ||||||| || | |||||||||||||||||||||||    
T  525232 gaagtattatataatcatttatcatattgttaattcaa-tttctaaaaattattttat-atgtccgtaatttaaaaaagaaaagtaa 525148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 51303385 - 51303434
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggagggctcac 63  Q
    ||||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  51303385 gggtgtgtttggattgagggtttaggaggggaggggaggggagggctcac 51303434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 26324015 - 26324059
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||    
T  26324015 gggtgtgtttggattgagggtttaggaggggaagggaggggaggg 26324059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 212
Target Start/End: Original strand, 52707756 - 52707844
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagt 212  Q
    |||||||||||| || |||||||| ||||||| |  | ||||  |||||| |||| ||||| || ||||||||||||||||||||||||    
T  52707756 gaagtattatatcatcatttatcatgttgttattaaatttttaaaaaaattatttgataatgttggtaatttaaaaaagaaaagtaagt 52707844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 30010333 - 30010376
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggagg 57  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||    
T  30010333 gggtgtgtttggattgagggtttaggaggggaagggaggggagg 30010376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 12234011 - 12234057
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggagggct 60  Q
    ||||||||||||||||||||||| ||||||||||||| || ||||||    
T  12234011 gggtgtgtttggattgagggtttaggaggggaagggagggtagggct 12234057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 33673360 - 33673414
Alignment:
Q  158 tcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagt 212  Q
    |||||||| | ||||| |||||||||||||| ||||||||||||||||| |||||    
T  33673360 tcaatttttttaaaattattttataatattcataatttaaaaaagaaaaataagt 33673414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 35927815 - 35927864
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggagggctcac 63  Q
    ||||||||||||||||||| ||| ||||||||| ||| ||||||||||||    
T  35927815 gggtgtgtttggattgaggttttaggaggggaatggaggggagggctcac 35927864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 20607460 - 20607416
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    |||||||||||||| |||||||| ||||||||||||| |||||||    
T  20607460 gggtgtgtttggatggagggtttaggaggggaagggaggggaggg 20607416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 41498405 - 41498449
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    ||||||||||||||||||||||| |||||||||| || |||||||    
T  41498405 gggtgtgtttggattgagggtttaggaggggaagtgaggggaggg 41498449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 12234252 - 12234209
Alignment:
Q  15 ggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    ||||||||||||| |||||||| ||||||||||||| |||||||    
T  12234252 ggtgtgtttggatggagggtttaggaggggaagggaggggaggg 12234209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 201
Target Start/End: Original strand, 20607330 - 20607404
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaa 201  Q
    ||||||||||||||| || |||||   |||||||| ||||||| ||||||||||||||||| | | ||||| ||||||    
T  20607330 gaagtattatatgataatatatca---tgttaatttaattttcaaaaaatcattttataatgtccataattaaaaaaa 20607404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 35513037 - 35512994
Alignment:
Q  17 tgtgtttggattgagggttttggaggggaagggatgggagggct 60  Q
    ||||||||||| |||||||| ||||||||||||| |||||||||    
T  35513037 tgtgtttggatggagggtttaggaggggaagggaggggagggct 35512994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 26941076 - 26941042
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagg 48  Q
    ||||||||||||||||||||||| |||||||||||    
T  26941076 gggtgtgtttggattgagggtttaggaggggaagg 26941042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 58
Target Start/End: Complemental strand, 38510135 - 38510093
Alignment:
Q  16 gtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||    
T  38510135 gtgtgtttggattaagggtttaggaggggaagggaggggaggg 38510093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 40287388 - 40287334
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattt 178  Q
    |||||||||||| || |||||| |  |||||||||||||||||||||| ||||||    
T  40287388 gaagtattatataatcatttatgattttgttaattcaattttctaaaactcattt 40287334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 38509895 - 38509944
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggagggctcac 63  Q
    |||||||||||||| |||||||| |||||||||||||  |||||| ||||    
T  38509895 gggtgtgtttggatagagggtttaggaggggaagggagaggagggttcac 38509944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 50
Target Start/End: Complemental strand, 525343 - 525307
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaaggga 50  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  525343 gggtgtgtttggattgagggtttaggacgggaaggga 525307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 50
Target Start/End: Complemental strand, 1085733 - 1085697
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaaggga 50  Q
    |||||||||||||| |||||||| |||||||||||||    
T  1085733 gggtgtgtttggatagagggtttaggaggggaaggga 1085697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 2858933 - 2858977
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    |||||||||||||| |||||||| |||||| |||||| |||||||    
T  2858933 gggtgtgtttggatggagggtttaggagggaaagggaggggaggg 2858977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 20576136 - 20576176
Alignment:
Q  16 gtgtgtttggattgagggttttggaggggaagggatgggag 56  Q
    |||||||||||| |||||||| ||||||||||||| |||||    
T  20576136 gtgtgtttggatagagggtttaggaggggaagggaggggag 20576176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 20607224 - 20607260
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaaggga 50  Q
    ||||||||||| ||||||||||| |||||||||||||    
T  20607224 gggtgtgtttgaattgagggtttaggaggggaaggga 20607260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 30010575 - 30010531
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    |||||||||||||| |||||||| | ||||||||||| |||||||    
T  30010575 gggtgtgtttggatggagggtttagaaggggaagggaggggaggg 30010531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 35349705 - 35349661
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    ||||||||||||||| |||||||  |||||||||||| |||||||    
T  35349705 gggtgtgtttggattaagggtttatgaggggaagggaggggaggg 35349661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 40094934 - 40094978
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    |||||||||||||| |||||||| ||||||||||| | |||||||    
T  40094934 gggtgtgtttggatggagggtttaggaggggaaggaaggggaggg 40094978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 216
Target Start/End: Complemental strand, 1529 - 1438
Alignment:
Q  125 aagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctc 216  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| | || | ||||||||||||||||||||||||    
T  1529 aagtattatatgatcatttatcaagttgttaattcaattttctaaaaatcattctataatgtccgcagtttaaaaaagaaaagtaagtcctc 1438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 1641 - 1592
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggagggctcac 63  Q
    ||||||||||| ||||||||||| |||| |||| ||| ||||||||||||    
T  1641 gggtgtgtttgaattgagggtttaggagaggaatggaggggagggctcac 1592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 1175 - 1215
Alignment:
Q  16 gtgtgtttggattgagggttttggaggggaagggatgggag 56  Q
    ||||||||||||||||||||| |||||||||| || |||||    
T  1175 gtgtgtttggattgagggtttaggaggggaagagaggggag 1215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 4e-28; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 34641103 - 34641195
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    ||||||||||||||| |||||||| |||||||||||||||||||  ||||||||||||||| | |||||||||||||||||||||||| ||||||    
T  34641103 gaagtattatatgatcatttatcatgttgttaattcaattttct--aaatcattttataatgtccgtaatttaaaaaagaaaagtaagccctccc 34641195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 44412472 - 44412566
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    ||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||| | | |||||||||||||||| |||||| |||||||||    
T  44412472 gaagtattatatgatgatttatcatgttgttaattcaattttcaaaaaatcattttacattgttcgtaatttaaaaaataaaagtgagtcctccc 44412566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 128 - 206
Target Start/End: Original strand, 48683727 - 48683806
Alignment:
Q  128 tattatatgattatttatcaa-gttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaa 206  Q
    ||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  48683727 tattatatgatcatttatcaatgttgttaattcaatttcctaaaaatcattttataatgttcgtaatttaaaaaagaaaa 48683806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 124 - 206
Target Start/End: Complemental strand, 10943747 - 10943665
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaa 206  Q
    |||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||   |||||||||||||||||    
T  10943747 gaagtattatataattatttattatgttgttaattcaattttctaaaaatcattttataatatctataatttaaaaaagaaaa 10943665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 124 - 210
Target Start/End: Original strand, 26135908 - 26135994
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaa 210  Q
    |||||||||||| |||||||||||  ||||||||||||||||| |||||| |||||||||| | |||||||||||||||||||||||    
T  26135908 gaagtattatataattatttatcatattgttaattcaattttcaaaaaattattttataatgtccgtaatttaaaaaagaaaagtaa 26135994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 124 - 206
Target Start/End: Original strand, 40858676 - 40858758
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaa 206  Q
    ||||||||||||||| |||||||| |||||||||||||||||| ||| ||||||||||||| | |||||||||||||||||||    
T  40858676 gaagtattatatgatcatttatcatgttgttaattcaattttcaaaagatcattttataatgtccgtaatttaaaaaagaaaa 40858758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 126 - 210
Target Start/End: Original strand, 55428492 - 55428576
Alignment:
Q  126 agtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaa 210  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||| || |||| | ||||||||||| |||||||||||    
T  55428492 agtattatatgatcatttatcacgttgttaattcaattttctaaaaatcatcttgtaatgtccgtaatttaaagaagaaaagtaa 55428576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 124 - 215
Target Start/End: Original strand, 24253833 - 24253924
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcct 215  Q
    ||||| |||||| || |||||||| ||||||||||||| ||||||||| |||||||||||| | ||||||||||||||||||||||| ||||    
T  24253833 gaagtgttatataatcatttatcatgttgttaattcaactttctaaaactcattttataatgtccgtaatttaaaaaagaaaagtaaatcct 24253924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 124 - 210
Target Start/End: Complemental strand, 17474339 - 17474253
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaa 210  Q
    |||||||||| |||||||||||||  ||||||||||||||||  |||||| |||||||||| | |||||||||||||||||||||||    
T  17474339 gaagtattatttgattatttatcatattgttaattcaatttttaaaaaattattttataatgtccgtaatttaaaaaagaaaagtaa 17474253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 124 - 210
Target Start/End: Original strand, 42772143 - 42772229
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaa 210  Q
    ||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||| | |||||||| || ||| |||||||    
T  42772143 gaagtattatatgatcatttatcatgttgttaattcaattttcaaaaaatcattttataatgtccgtaattttaagaagcaaagtaa 42772229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 8432392 - 8432300
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    |||||||||||  ||||||||||| ||||||||||||||||| |||||||||||||||||| |  ||||||  ||||| ||||||||||||||||    
T  8432392 gaagtattataaaattatttatcatgttgttaattcaattttgtaaaaatcattttataatgtctgtaatt--aaaaaaaaaagtaagtcctccc 8432300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 124 - 210
Target Start/End: Original strand, 41414189 - 41414276
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaattt-aaaaaagaaaagtaa 210  Q
    ||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||| | | | |||| |||||||||||||||    
T  41414189 gaagtattatatgatcatttatcatgttgttaactcaattttctaaaaatcattttataatgtccctgatttaaaaaaagaaaagtaa 41414276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 124 - 211
Target Start/End: Complemental strand, 18086114 - 18086026
Alignment:
Q  124 gaagtattatatgattattt-atcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaag 211  Q
    |||||||| |||||| |||| || | |||||||||||||||||||||||| ||||||||||| |  |||||||||||||||||||||||    
T  18086114 gaagtattttatgatcattttattatgttgttaattcaattttctaaaaaacattttataatgtctgtaatttaaaaaagaaaagtaag 18086026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 124 - 212
Target Start/End: Original strand, 36727287 - 36727375
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagt 212  Q
    ||||||||||||||| |||||||| |||||||| | |||||||| ||||| |||||||||| |||||||||||||| | ||||| ||||    
T  36727287 gaagtattatatgataatttatcatgttgttaagttaattttcttaaaattattttataatgttcgtaatttaaaagataaaaggaagt 36727375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 21090204 - 21090129
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaa 199  Q
    ||||||||||||||| || ||||| |||||||||||||||||| ||||||| |||||||||||  |||||||||||    
T  21090204 gaagtattatatgataatatatcatgttgttaattcaattttcaaaaaatcgttttataatatctgtaatttaaaa 21090129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 54985810 - 54985739
Alignment:
Q  140 atttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaag 211  Q
    ||||||||  |||||||||||||||||||||||||| |||||||| | ||||||||||||| ||||| ||||    
T  54985810 atttatcatattgttaattcaattttctaaaaatcaatttataatgtccgtaatttaaaaacgaaaactaag 54985739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 200
Target Start/End: Complemental strand, 42699745 - 42699669
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaa 200  Q
    ||||||||||||||| ||||||||  ||| |||||||||||||||||| | |||||||||| | | |||||||||||    
T  42699745 gaagtattatatgatcatttatcatattgataattcaattttctaaaatttattttataatgtccataatttaaaaa 42699669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 16884104 - 16884012
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    ||||||||||||||| |||||||| |||||| |||||||||| ||||| |  |||||| ||||| |||| |||||||||||| ||||| ||||||    
T  16884104 gaagtattatatgatcatttatcatgttgtt-attcaattttttaaaattttttttat-atatttgtaaattaaaaaagaaatgtaagccctccc 16884012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 46978538 - 46978594
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcatttta 180  Q
    |||||||||||| || |||||||| |||||||||| |||||| ||||||||||||||    
T  46978538 gaagtattatataatcatttatcatgttgttaattaaattttataaaaatcatttta 46978594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 172
Target Start/End: Complemental strand, 27197781 - 27197734
Alignment:
Q  125 aagtattatatgattatttatcaagttgttaattcaattttctaaaaa 172  Q
    |||||||||||||| || ||||| ||||||||||||||||||||||||    
T  27197781 aagtattatatgatcatctatcatgttgttaattcaattttctaaaaa 27197734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 34641233 - 34641187
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggagggct 60  Q
    |||||||||||||| |||||||| ||||||||||||| |||||||||    
T  34641233 gggtgtgtttggatggagggtttaggaggggaagggaggggagggct 34641187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 206
Target Start/End: Complemental strand, 45663277 - 45663197
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaa 206  Q
    ||||||||||| ||| |||||||| ||||||| |||||||||| |||||| |||||||| | ||||| |||||||||| ||||    
T  45663277 gaagtattataagatcatttatcatgttgttatttcaattttcaaaaaat-attttatagtgttcgt-atttaaaaaaaaaaa 45663197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 24560218 - 24560262
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    ||||||||||||||| ||||||| ||||||||||||| |||||||    
T  24560218 gggtgtgtttggattaagggtttaggaggggaagggaggggaggg 24560262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 206
Target Start/End: Complemental strand, 39147071 - 39146995
Alignment:
Q  128 tattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaa 206  Q
    |||||||||||||||||| |  |||||| ||||||||| |||||   |||||||||||||  ||||||||| |||||||    
T  39147071 tattatatgattatttattattttgttatttcaattttataaaa--tattttataatatttataatttaaataagaaaa 39146995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 24560460 - 24560418
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggag 56  Q
    |||||||||||||| |||||||| ||||||||| |||||||||    
T  24560460 gggtgtgtttggatggagggtttaggaggggaacggatgggag 24560418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 37102382 - 37102348
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagg 48  Q
    ||||||||||||||||||||||| |||||||||||    
T  37102382 gggtgtgtttggattgagggtttaggaggggaagg 37102348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 55
Target Start/End: Complemental strand, 55428619 - 55428581
Alignment:
Q  17 tgtgtttggattgagggttttggaggggaagggatggga 55  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  55428619 tgtgtttggattgagggtttaggaggggaagggagggga 55428581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 41414079 - 41414128
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggagggctcac 63  Q
    |||| ||||| |||||||||||| |||||| |||||| ||||||||||||    
T  41414079 gggtatgtttagattgagggtttaggagggaaagggaggggagggctcac 41414128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 49815510 - 49815461
Alignment:
Q  169 aaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    |||| ||||||||| || | ||||||||||||||||||||||| ||||||    
T  49815510 aaaaacattttatagtacttgtaatttaaaaaagaaaagtaagccctccc 49815461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 54574599 - 54574562
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggat 51  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  54574599 gggtgtgtttggattgagggtttaggaagggaagggat 54574562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 18654601 - 18654645
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    |||||||||||||| |||||||| |||||| ||| ||||||||||    
T  18654601 gggtgtgtttggatggagggtttaggagggaaagagatgggaggg 18654645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 18654842 - 18654802
Alignment:
Q  16 gtgtgtttggattgagggttttggaggggaagggatgggag 56  Q
    ||||||||| ||||||||||| ||||||||||||| |||||    
T  18654842 gtgtgtttgaattgagggtttaggaggggaagggaggggag 18654802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 24253722 - 24253758
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaaggga 50  Q
    ||||||||||||||||||||||| |||||| ||||||    
T  24253722 gggtgtgtttggattgagggtttaggagggaaaggga 24253758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 28582752 - 28582708
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    ||||||||||||| ||||| ||| ||||||||||||| |||||||    
T  28582752 gggtgtgtttggactgaggatttaggaggggaagggaggggaggg 28582708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 50
Target Start/End: Complemental strand, 41110564 - 41110528
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaaggga 50  Q
    |||||||||||||||||||||||  ||||||||||||    
T  41110564 gggtgtgtttggattgagggtttgtgaggggaaggga 41110528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 42772046 - 42772094
Alignment:
Q  15 ggtgtgtttggattgagggttttggaggggaagggatgggagggctcac 63  Q
    |||||||||||||||| |||||  |||||||||||| |||||| |||||    
T  42772046 ggtgtgtttggattgaaggtttaagaggggaagggaggggaggactcac 42772094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 44412362 - 44412410
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggagggctca 62  Q
    ||||||||||| ||||||||||| |||||||||| || |||||| ||||    
T  44412362 gggtgtgtttgaattgagggtttaggaggggaagagaggggaggactca 44412410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 44412603 - 44412555
Alignment:
Q  15 ggtgtgtttggattgagggttttggaggggaagggatgggagggctcac 63  Q
    |||||||||||||||| |||||  |||||||||||| |||||| |||||    
T  44412603 ggtgtgtttggattgatggtttgtgaggggaagggaggggaggactcac 44412555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 1e-27; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 132 - 210
Target Start/End: Complemental strand, 9051659 - 9051581
Alignment:
Q  132 atatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaa 210  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  9051659 atatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatatccgtaatttaaaaaaaaaaagtaa 9051581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 124 - 210
Target Start/End: Original strand, 31799032 - 31799118
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaa 210  Q
    ||||||||||||||| |||||||| |||||||||||||||||  |||||| |||||||||||| |||||||||||||||||||||||    
T  31799032 gaagtattatatgatcatttatcatgttgttaattcaatttttaaaaaattattttataatatccgtaatttaaaaaagaaaagtaa 31799118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 124 - 211
Target Start/End: Original strand, 10293359 - 10293446
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaag 211  Q
    |||||||||||||||||||||| | ||||| |||||| |||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  10293359 gaagtattatatgattatttatgatgttgtcaattcagttttctaaaaatcattttataatatctgtaatttgaaaaagaaaagtaag 10293446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 124 - 210
Target Start/End: Original strand, 26318416 - 26318502
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaa 210  Q
    ||||||||||||||| | |||||| ||||||||||||||||||||||| ||||||||||| || | |||||||||||||||||||||    
T  26318416 gaagtattatatgatcaattatcatgttgttaattcaattttctaaaagtcattttataaaatccataatttaaaaaagaaaagtaa 26318502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 34176700 - 34176610
Alignment:
Q  128 tattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    ||||||||||| |||||| |  |||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||| ||||    
T  34176700 tattatatgatcatttattatattgttaattcaattttttaaaaatcaatttataattttcgtaatttaaaaaagaaaagtaagtcttccc 34176610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 124 - 213
Target Start/End: Original strand, 3841196 - 3841286
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaa--atcattttataatattcgtaatttaaaaaagaaaagtaagtc 213  Q
    |||||||||||| || ||||||||  |||||||||||||||| |||||  ||||||||||||| | ||||||||||||||||||||||||||    
T  3841196 gaagtattatatcatcatttatcat-ttgttaattcaattttgtaaaaaaatcattttataatgtccgtaatttaaaaaagaaaagtaagtc 3841286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 15323339 - 15323406
Alignment:
Q  127 gtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatt 194  Q
    |||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||| | |||||||    
T  15323339 gtattatatgatcatttgtcatgttgttaattcaattttctaaaaatcattttataatgtccgtaatt 15323406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 15353477 - 15353544
Alignment:
Q  127 gtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatt 194  Q
    |||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| | |||||||    
T  15353477 gtattatatgatcatttataatgttgttaattcaattttctaaaaatcattttataatgtccgtaatt 15353544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 124 - 210
Target Start/End: Complemental strand, 4097368 - 4097282
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaa 210  Q
    |||||||| |||||| |||||||| ||||||||||||||||||||||||  |||||||||| | ||| ||| |||||| ||||||||    
T  4097368 gaagtattgtatgatcatttatcatgttgttaattcaattttctaaaaaatattttataatgtccgtgattcaaaaaataaaagtaa 4097282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 124 - 210
Target Start/End: Complemental strand, 25468532 - 25468446
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaa 210  Q
    |||||||||||| || |||||||| |||||||| | |||||||| ||||| |||||||||| | | |||||||||||||||||||||    
T  25468532 gaagtattatataatcatttatcacgttgttaaattaattttcttaaaattattttataatgtccataatttaaaaaagaaaagtaa 25468446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 15373729 - 15373672
Alignment:
Q  127 gtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataat 184  Q
    |||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||    
T  15373729 gtattatatgatcatttgtcatgttgttaattcaattttctaaaaatcattttataat 15373672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 23090996 - 23091045
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggagggctcac 63  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||||||||||    
T  23090996 gggtgtgtttggattgaaggtttaggaggggaagggaggggagggctcac 23091045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 14515474 - 14515518
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||    
T  14515474 gggtgtgtttggattgagggtttaggaggggaagggaggggaggg 14515518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 9719034 - 9719075
Alignment:
Q  16 gtgtgtttggattgagggttttggaggggaagggatgggagg 57  Q
    ||||||||||||||||||||| ||||||||||||| ||||||    
T  9719034 gtgtgtttggattgagggtttaggaggggaagggaggggagg 9719075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 10818230 - 10818271
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatggga 55  Q
    ||||||||||||||||||||||| ||||||||||||| ||||    
T  10818230 gggtgtgtttggattgagggtttaggaggggaagggagggga 10818271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 15323226 - 15323275
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggagggctcac 63  Q
    ||||||||||||||||||||||| ||||||||||||| | ||| ||||||    
T  15323226 gggtgtgtttggattgagggtttaggaggggaagggaggagagcgctcac 15323275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 15353365 - 15353414
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggagggctcac 63  Q
    ||||||||||||||||||||||| ||||||||||||| | ||| ||||||    
T  15353365 gggtgtgtttggattgagggtttaggaggggaagggaggagagcgctcac 15353414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 30487307 - 30487356
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggagggctcac 63  Q
    |||||||||||||| |||||||| ||||||||||||| ||||||| ||||    
T  30487307 gggtgtgtttggatggagggtttaggaggggaagggaggggagggttcac 30487356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 9721139 - 9721183
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    ||||||||||||||||| ||||| ||||||||||||| |||||||    
T  9721139 gggtgtgtttggattgaaggtttaggaggggaagggaggggaggg 9721183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 30850045 - 30849953
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    |||||||||||||||  ||||||| ||| ||| || ||||||  |||||  |||||||| ||| ||||||||||||| |||| |||| |||||||    
T  30850045 gaagtattatatgatcgtttatcatgttattattttaatttt--aaaaaatattttatagtatgcgtaatttaaaaacgaaatgtaaatcctccc 30849953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 4097236 - 4097270
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagg 48  Q
    ||||||||||||||||||||||| |||||||||||    
T  4097236 gggtgtgtttggattgagggtttaggaggggaagg 4097270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 58
Target Start/End: Complemental strand, 19278278 - 19278236
Alignment:
Q  16 gtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    |||||||||||||||| |||| ||||||||||||| |||||||    
T  19278278 gtgtgtttggattgagagtttaggaggggaagggaggggaggg 19278236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 9051775 - 9051734
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatggga 55  Q
    |||||||||||||||||||||||  |||||||||||| ||||    
T  9051775 gggtgtgtttggattgagggtttaagaggggaagggagggga 9051734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 7775959 - 7775991
Alignment:
Q  16 gtgtgtttggattgagggttttggaggggaagg 48  Q
    |||||||||||| ||||||||||||||||||||    
T  7775959 gtgtgtttggatggagggttttggaggggaagg 7775991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 10818459 - 10818415
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    |||||||||||||||||| |||| ||||||| ||||| |||||||    
T  10818459 gggtgtgtttggattgagagtttaggaggggtagggaggggaggg 10818415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 12811223 - 12811179
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    ||||||||||||||||||||||| ||| |||||| || |||||||    
T  12811223 gggtgtgtttggattgagggtttaggatgggaagagaggggaggg 12811179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 14515714 - 14515670
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    |||||||||||||| |||||||| ||||||||||| | |||||||    
T  14515714 gggtgtgtttggatggagggtttaggaggggaaggaaagggaggg 14515670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 28477126 - 28477182
Alignment:
Q  150 ttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaa 206  Q
    ||||||||| | |||||||| ||| |||||||||| |  ||||||||||||||||||    
T  28477126 ttgttaatttatttttctaagaattattttataatgtctgtaatttaaaaaagaaaa 28477182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 29693023 - 29693079
Alignment:
Q  150 ttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaa 206  Q
    ||||||||| | |||||||| ||| |||||||||| |  ||||||||||||||||||    
T  29693023 ttgttaatttatttttctaagaattattttataatgtctgtaatttaaaaaagaaaa 29693079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 242331 - 242413
Alignment:
Q  128 tattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaa 210  Q
    |||||||| || |||||||| || |||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||    
T  242331 tattatatcatcatttatcatgtcgttaattcaattttttaaaaatcattttataatgtccgtaatttaaaaaagaaaagtaa 242413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 210
Target Start/End: Original strand, 184718 - 184804
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagtaa 210  Q
    ||||||||||||||| || ||||| |||||||||||||||||  ||||||||||||||||| | | ||||||||||||||| |||||    
T  184718 gaagtattatatgataatatatcatgttgttaattcaattttaaaaaaatcattttataatgtccataatttaaaaaagaatagtaa 184804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 128 - 209
Target Start/End: Original strand, 53000 - 53081
Alignment:
Q  128 tattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagta 209  Q
    ||||||||||| |||||||| ||||||| |||||||||| ||||||||||| |||||   | ||||||||||||||||||||    
T  53000 tattatatgatcatttatcatgttgttagttcaattttcaaaaaatcatttcataatgcccataatttaaaaaagaaaagta 53081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 124 - 207
Target Start/End: Original strand, 37494 - 37577
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaag 207  Q
    ||||| ||||||||| | |||||| |||||||||| | ||||||||||||||| ||||| | |  |||||||||||||||||||    
T  37494 gaagtgttatatgatcacttatcatgttgttaattaagttttctaaaaatcatcttatattgtctgtaatttaaaaaagaaaag 37577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 124 - 183
Target Start/End: Original strand, 8258 - 8317
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaattttctaaaaatcattttataa 183  Q
    ||||||||||||||| ||| |||| ||||||||||||||||| ||||||| |||||||||    
T  8258 gaagtattatatgatcattaatcatgttgttaattcaattttttaaaaataattttataa 8317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1414 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1414
Description:

Target: scaffold1414; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 185
Target Start/End: Original strand, 412 - 474
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattc-aattttctaaaaatcattttataata 185  Q
    |||||||| ||| || |||||||| | ||||||||  ||||||||||||||||||||||||||    
T  412 gaagtattttattatcatttatcatgctgttaattttaattttctaaaaatcattttataata 474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 3150 - 3190
Alignment:
Q  16 gtgtgtttggattgagggttttggaggggaagggatgggag 56  Q
    |||||||||||||||| |||| ||||||||||||| |||||    
T  3150 gtgtgtttggattgagagtttaggaggggaagggaggggag 3190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 39433 - 39389
Alignment:
Q  14 gggtgtgtttggattgagggttttggaggggaagggatgggaggg 58  Q
    ||||||||||||||||||||||| | |||| |||||| |||||||    
T  39433 gggtgtgtttggattgagggtttagaagggaaagggaggggaggg 39389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 122067 - 122023
Alignment:
Q  174 cattttataatattcgtaatttaaaaaagaaaagtaagtcctccc 218  Q
    ||||||||||| |||||||||| ||||||||||| || |||||||    
T  122067 cattttataatgttcgtaattttaaaaagaaaagcaaatcctccc 122023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 69340 - 69264
Alignment:
Q  124 gaagtattatatgattatttatcaagttgttaattcaatt-ttctaaaaatcattttataatattcgtaatttaaaa 199  Q
    ||||||||||||||| ||||||||  |||||| ||||||| || | ||||  |||||||||| |||||| |||||||    
T  69340 gaagtattatatgatcatttatcatcttgttatttcaattctttttaaaaagattttataatgttcgtattttaaaa 69264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University