View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18960_low_16 (Length: 317)
Name: NF18960_low_16
Description: NF18960
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18960_low_16 |
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Alignment Details
Target: chr8 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 23 - 299
Target Start/End: Complemental strand, 24336849 - 24336573
Alignment:
| Q |
23 |
agtttgcattatcaatttcttccatttttggaaatatcaaccttttatcattggtcaatgaatttcttttggtattgatcaatattggatttggtgagcc |
122 |
Q |
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| T |
24336849 |
agtttgcattatcaatttcttccatttttggaaatatcaaccttttatcattggtcaatgaatttcttttggtattgatcaatattggatttggtgaacc |
24336750 |
T |
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| Q |
123 |
aaatacttcaagtgattttcttggtgtcttttctccatctaatggattttgcatttgaacaagatgatttcttgagttagaagccaaactattcttttca |
222 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24336749 |
aaatacttcaagtgattttcttggtgtcttttctccatctaatggattttgcatttgaacaagatgatttcttgagttagaagccaaactattcttttca |
24336650 |
T |
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| Q |
223 |
ttgtttaatcctacccttaacttctcttgcttttcaaagtaaacatctttattgatcaagatttctgagctaggctt |
299 |
Q |
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||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
24336649 |
ttgttcaatcctacccttaacttctcttgcttttgaaagtaaacatctttattgatcaagatttctgagctaggctt |
24336573 |
T |
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