View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18961_low_16 (Length: 206)

Name: NF18961_low_16
Description: NF18961
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18961_low_16
NF18961_low_16
[»] chr7 (57 HSPs)
chr7 (1-206)||(28504960-28505186)
chr7 (1-206)||(34201019-34201245)
chr7 (1-127)||(15754546-15754673)
chr7 (1-127)||(39267305-39267431)
chr7 (1-127)||(18302514-18302640)
chr7 (122-206)||(11995831-11995915)
chr7 (1-127)||(9751209-9751335)
chr7 (3-127)||(38227815-38227940)
chr7 (1-127)||(2831965-2832090)
chr7 (3-126)||(17061621-17061745)
chr7 (14-127)||(44116840-44116953)
chr7 (3-74)||(12756378-12756449)
chr7 (3-126)||(9509524-9509649)
chr7 (4-119)||(3564026-3564142)
chr7 (1-74)||(16385917-16385990)
chr7 (4-80)||(44014557-44014633)
chr7 (3-80)||(12699215-12699292)
chr7 (1-74)||(40443766-40443839)
chr7 (2-127)||(15143697-15143823)
chr7 (3-80)||(810790-810867)
chr7 (1-74)||(27847503-27847576)
chr7 (134-206)||(16324241-16324313)
chr7 (2-73)||(22073306-22073377)
chr7 (134-203)||(16056566-16056635)
chr7 (1-74)||(26212374-26212447)
chr7 (1-70)||(47832201-47832270)
chr7 (1-52)||(11995717-11995768)
chr7 (134-206)||(67980-68053)
chr7 (5-74)||(2279781-2279850)
chr7 (5-74)||(12255454-12255523)
chr7 (130-206)||(15754697-15754774)
chr7 (1-74)||(16219375-16219448)
chr7 (134-206)||(16219530-16219602)
chr7 (3-74)||(68135-68206)
chr7 (76-123)||(11995764-11995811)
chr7 (137-203)||(15116719-15116785)
chr7 (1-71)||(21064821-21064891)
chr7 (1-74)||(9389354-9389427)
chr7 (134-206)||(9389509-9389582)
chr7 (9-74)||(16324395-16324460)
chr7 (3-52)||(18006052-18006101)
chr7 (134-203)||(22073154-22073223)
chr7 (134-206)||(47832043-47832116)
chr7 (6-74)||(14045213-14045281)
chr7 (6-74)||(14355243-14355311)
chr7 (1-75)||(2529636-2529710)
chr7 (5-71)||(9177252-9177318)
chr7 (137-203)||(15113182-15113248)
chr7 (6-74)||(1867650-1867718)
chr7 (130-173)||(9751359-9751403)
chr7 (6-73)||(14036664-14036731)
chr7 (6-73)||(14346694-14346761)
chr7 (132-173)||(2529864-2529906)
chr7 (16-74)||(12901794-12901852)
chr7 (134-191)||(44014423-44014481)
chr7 (1-74)||(11880639-11880712)
chr7 (13-74)||(16056717-16056778)
[»] chr8 (47 HSPs)
chr8 (1-206)||(5865936-5866162)
chr8 (1-206)||(17141149-17141375)
chr8 (1-206)||(21255455-21255681)
chr8 (1-206)||(21491228-21491454)
chr8 (1-206)||(21249617-21249843)
chr8 (3-125)||(23648890-23649013)
chr8 (3-127)||(41598519-41598644)
chr8 (3-92)||(21923589-21923678)
chr8 (1-126)||(20536543-20536670)
chr8 (3-127)||(6759591-6759717)
chr8 (3-92)||(18878898-18878988)
chr8 (3-126)||(7373084-7373209)
chr8 (3-80)||(16092002-16092079)
chr8 (3-126)||(23406716-23406841)
chr8 (3-92)||(28648705-28648794)
chr8 (1-74)||(45130690-45130763)
chr8 (3-73)||(22627125-22627195)
chr8 (3-80)||(18818071-18818148)
chr8 (11-96)||(21674071-21674157)
chr8 (3-127)||(22875400-22875525)
chr8 (3-91)||(26355359-26355448)
chr8 (1-74)||(31971633-31971706)
chr8 (1-77)||(6520754-6520830)
chr8 (1-74)||(21918669-21918742)
chr8 (1-74)||(25362810-25362883)
chr8 (1-74)||(38854910-38854983)
chr8 (1-74)||(39834221-39834294)
chr8 (1-73)||(16199317-16199389)
chr8 (135-206)||(6520603-6520674)
chr8 (1-71)||(21414886-21414956)
chr8 (134-203)||(21285836-21285905)
chr8 (134-206)||(26355512-26355585)
chr8 (134-205)||(23760654-23760725)
chr8 (5-75)||(20499048-20499118)
chr8 (5-73)||(17266579-17266647)
chr8 (3-74)||(19801088-19801159)
chr8 (5-75)||(37116812-37116882)
chr8 (133-205)||(21673940-21674013)
chr8 (9-74)||(23760507-23760572)
chr8 (5-75)||(982989-983059)
chr8 (1-46)||(13507668-13507713)
chr8 (1-46)||(13597200-13597245)
chr8 (1-74)||(19899481-19899554)
chr8 (13-74)||(24353489-24353550)
chr8 (1-45)||(19976860-19976904)
chr8 (1-45)||(19983508-19983552)
chr8 (5-73)||(40492438-40492506)
[»] chr4 (48 HSPs)
chr4 (1-206)||(16596881-16597107)
chr4 (1-206)||(15552049-15552275)
chr4 (1-127)||(24029077-24029203)
chr4 (1-127)||(13812468-13812594)
chr4 (3-127)||(44928584-44928709)
chr4 (3-124)||(20156951-20157072)
chr4 (15-127)||(22633886-22633998)
chr4 (3-127)||(14038983-14039109)
chr4 (3-92)||(16239653-16239743)
chr4 (3-92)||(6190803-6190893)
chr4 (1-74)||(3097021-3097094)
chr4 (3-127)||(44102545-44102669)
chr4 (3-91)||(12774369-12774458)
chr4 (4-80)||(8846758-8846834)
chr4 (5-127)||(15091231-15091355)
chr4 (61-127)||(3332221-3332287)
chr4 (1-71)||(14052972-14053042)
chr4 (1-71)||(43198247-43198317)
chr4 (3-127)||(44053163-44053289)
chr4 (1-74)||(7089255-7089328)
chr4 (1-74)||(12903135-12903207)
chr4 (1-74)||(39705947-39706020)
chr4 (3-74)||(21814964-21815035)
chr4 (3-74)||(21818386-21818457)
chr4 (3-74)||(22636823-22636894)
chr4 (3-127)||(16377183-16377308)
chr4 (1-71)||(17047743-17047813)
chr4 (130-206)||(12774233-12774310)
chr4 (1-74)||(15099739-15099812)
chr4 (3-79)||(7799081-7799157)
chr4 (5-77)||(15464592-15464664)
chr4 (3-74)||(21815293-21815364)
chr4 (134-206)||(15099584-15099657)
chr4 (1-74)||(15868294-15868367)
chr4 (5-74)||(52242856-52242925)
chr4 (134-206)||(15190551-15190624)
chr4 (1-74)||(15190706-15190779)
chr4 (134-206)||(39706101-39706174)
chr4 (14-58)||(17046721-17046765)
chr4 (130-173)||(22634022-22634066)
chr4 (5-74)||(13436-13505)
chr4 (134-206)||(8846608-8846681)
chr4 (1-74)||(12287792-12287865)
chr4 (135-182)||(3332144-3332192)
chr4 (1-52)||(13844950-13845001)
chr4 (135-173)||(24029009-24029048)
chr4 (1-46)||(32851868-32851913)
chr4 (1-74)||(44676018-44676091)
[»] scaffold0218 (2 HSPs)
scaffold0218 (1-206)||(28939-29165)
scaffold0218 (134-203)||(7889-7958)
[»] scaffold0161 (1 HSPs)
scaffold0161 (1-206)||(2104-2330)
[»] chr2 (25 HSPs)
chr2 (1-201)||(23071622-23071843)
chr2 (3-127)||(23660357-23660482)
chr2 (3-126)||(23076777-23076900)
chr2 (3-126)||(298476-298600)
chr2 (3-92)||(22730894-22730984)
chr2 (3-127)||(27753909-27754035)
chr2 (3-127)||(32451590-32451716)
chr2 (3-92)||(22337486-22337575)
chr2 (6-80)||(28406362-28406436)
chr2 (1-74)||(23654069-23654142)
chr2 (3-73)||(22133878-22133948)
chr2 (3-73)||(22737841-22737911)
chr2 (1-71)||(23286242-23286312)
chr2 (1-67)||(28291961-28292027)
chr2 (1-74)||(37786-37859)
chr2 (130-206)||(22134025-22134102)
chr2 (1-74)||(20309483-20309556)
chr2 (1-74)||(25176231-25176304)
chr2 (130-206)||(28406213-28406290)
chr2 (137-203)||(22459377-22459443)
chr2 (5-73)||(23207744-23207812)
chr2 (5-71)||(23005197-23005263)
chr2 (5-51)||(39827602-39827648)
chr2 (5-74)||(22412722-22412791)
chr2 (5-70)||(23708282-23708347)
[»] scaffold0261 (2 HSPs)
scaffold0261 (3-206)||(15894-16118)
scaffold0261 (1-35)||(1765-1799)
[»] scaffold0175 (3 HSPs)
scaffold0175 (1-127)||(34456-34582)
scaffold0175 (3-127)||(13426-13552)
scaffold0175 (129-206)||(34356-34433)
[»] chr5 (39 HSPs)
chr5 (1-206)||(19660496-19660723)
chr5 (1-127)||(22119852-22119978)
chr5 (1-127)||(24766996-24767122)
chr5 (3-127)||(11580906-11581031)
chr5 (3-92)||(21985808-21985897)
chr5 (3-126)||(23390157-23390282)
chr5 (1-74)||(21292640-21292713)
chr5 (3-126)||(36154489-36154613)
chr5 (3-126)||(25431730-25431854)
chr5 (13-92)||(9078323-9078402)
chr5 (3-80)||(21565927-21566004)
chr5 (3-91)||(22959194-22959283)
chr5 (3-127)||(24493903-24494028)
chr5 (1-80)||(1096850-1096929)
chr5 (1-80)||(21871230-21871309)
chr5 (1-80)||(21875510-21875589)
chr5 (3-92)||(13095865-13095954)
chr5 (3-79)||(24529605-24529681)
chr5 (3-126)||(25421868-25421992)
chr5 (3-92)||(13025681-13025770)
chr5 (3-91)||(19669271-19669360)
chr5 (1-74)||(21498676-21498749)
chr5 (134-203)||(21329309-21329379)
chr5 (1-74)||(8286512-8286585)
chr5 (1-74)||(22075397-22075470)
chr5 (5-77)||(22107047-22107119)
chr5 (1-74)||(21329154-21329227)
chr5 (5-74)||(22144439-22144508)
chr5 (4-71)||(5888837-5888904)
chr5 (134-206)||(21565778-21565851)
chr5 (134-206)||(26011848-26011920)
chr5 (5-71)||(20026526-20026592)
chr5 (1-74)||(21741202-21741275)
chr5 (149-206)||(21741373-21741430)
chr5 (135-173)||(5888990-5889029)
chr5 (135-173)||(22120007-22120046)
chr5 (1-75)||(22177802-22177876)
chr5 (134-206)||(19669133-19669206)
chr5 (138-206)||(21501971-21502039)
[»] chr1 (51 HSPs)
chr1 (3-206)||(20918837-20919061)
chr1 (3-127)||(20135522-20135647)
chr1 (3-127)||(433342-433467)
chr1 (14-127)||(50209885-50209999)
chr1 (4-127)||(34510115-34510239)
chr1 (1-74)||(22355844-22355917)
chr1 (1-74)||(22357530-22357603)
chr1 (3-74)||(22532658-22532729)
chr1 (3-91)||(21754406-21754495)
chr1 (1-74)||(27250399-27250472)
chr1 (3-80)||(52927642-52927719)
chr1 (134-206)||(52927795-52927867)
chr1 (3-74)||(20846891-20846962)
chr1 (1-72)||(22921526-22921597)
chr1 (6-91)||(20248648-20248734)
chr1 (3-80)||(33681392-33681469)
chr1 (5-74)||(38801065-38801134)
chr1 (1-127)||(20091133-20091261)
chr1 (3-74)||(21027058-21027129)
chr1 (134-206)||(22237864-22237937)
chr1 (3-80)||(22238012-22238089)
chr1 (134-206)||(22921681-22921754)
chr1 (1-77)||(28194107-28194183)
chr1 (134-206)||(20637084-20637157)
chr1 (134-206)||(49261575-49261648)
chr1 (3-74)||(21162117-21162188)
chr1 (1-126)||(22354231-22354358)
chr1 (137-203)||(12271786-12271852)
chr1 (1-75)||(16759114-16759188)
chr1 (8-74)||(35981352-35981418)
chr1 (134-206)||(35981500-35981573)
chr1 (1-74)||(41049627-41049700)
chr1 (1-74)||(43697749-43697822)
chr1 (130-206)||(21754271-21754347)
chr1 (3-49)||(21301199-21301245)
chr1 (137-203)||(21861385-21861451)
chr1 (5-75)||(35260718-35260788)
chr1 (5-47)||(52940464-52940506)
chr1 (5-74)||(21895895-21895964)
chr1 (134-206)||(33681243-33681316)
chr1 (141-200)||(21896078-21896137)
chr1 (5-71)||(16381632-16381698)
chr1 (1-39)||(21787702-21787740)
chr1 (16-74)||(26065383-26065441)
chr1 (5-71)||(27652808-27652874)
chr1 (5-71)||(48521036-48521102)
chr1 (5-74)||(16367873-16367942)
chr1 (134-206)||(20248511-20248584)
chr1 (1-74)||(21342537-21342610)
chr1 (1-74)||(21347402-21347475)
chr1 (5-74)||(21861157-21861226)
[»] scaffold0026 (4 HSPs)
scaffold0026 (18-127)||(59179-59288)
scaffold0026 (3-80)||(39592-39669)
scaffold0026 (6-92)||(40226-40313)
scaffold0026 (26-92)||(26595-26662)
[»] chr6 (48 HSPs)
chr6 (3-127)||(28496134-28496259)
chr6 (1-127)||(1561638-1561765)
chr6 (3-127)||(19303202-19303327)
chr6 (1-127)||(21939719-21939845)
chr6 (3-127)||(29808544-29808670)
chr6 (3-74)||(18457103-18457174)
chr6 (3-92)||(18409488-18409577)
chr6 (3-74)||(20360632-20360703)
chr6 (3-92)||(22779888-22779978)
chr6 (1-74)||(18821489-18821562)
chr6 (3-91)||(19652566-19652655)
chr6 (1-74)||(20637953-20638026)
chr6 (1-92)||(25611382-25611473)
chr6 (3-92)||(17287457-17287547)
chr6 (3-119)||(29060883-29061000)
chr6 (1-127)||(15894089-15894217)
chr6 (3-80)||(4189339-4189416)
chr6 (3-80)||(4667874-4667951)
chr6 (3-80)||(4674721-4674798)
chr6 (3-80)||(20594156-20594233)
chr6 (1-74)||(23019796-23019869)
chr6 (3-80)||(31155059-31155136)
chr6 (1-92)||(22334541-22334632)
chr6 (1-80)||(27332943-27333022)
chr6 (1-80)||(27393683-27393762)
chr6 (14-92)||(25603057-25603135)
chr6 (130-206)||(1561537-1561614)
chr6 (3-80)||(4185484-4185561)
chr6 (1-74)||(16920303-16920376)
chr6 (130-206)||(28496283-28496359)
chr6 (130-206)||(29808694-29808770)
chr6 (135-206)||(27333099-27333170)
chr6 (135-206)||(27393839-27393910)
chr6 (149-206)||(19652429-19652486)
chr6 (1-74)||(22080396-22080469)
chr6 (150-206)||(23019642-23019698)
chr6 (1-77)||(25644708-25644784)
chr6 (135-205)||(4668028-4668098)
chr6 (135-205)||(4674875-4674945)
chr6 (2-39)||(15041211-15041248)
chr6 (1-74)||(25629014-25629087)
chr6 (5-73)||(20109605-20109673)
chr6 (5-71)||(35008618-35008684)
chr6 (1-74)||(11185880-11185953)
chr6 (1-74)||(22831880-22831953)
chr6 (135-191)||(4189206-4189262)
chr6 (135-203)||(19668611-19668679)
chr6 (158-206)||(22080576-22080624)
[»] scaffold0221 (1 HSPs)
scaffold0221 (1-127)||(12468-12594)
[»] scaffold0075 (3 HSPs)
scaffold0075 (1-127)||(7953-8079)
scaffold0075 (132-173)||(8105-8147)
scaffold0075 (5-74)||(53134-53203)
[»] scaffold0016 (2 HSPs)
scaffold0016 (1-127)||(207178-207304)
scaffold0016 (3-126)||(2186-2311)
[»] chr3 (71 HSPs)
chr3 (1-173)||(4588474-4588641)
chr3 (1-127)||(12340088-12340214)
chr3 (1-127)||(14669096-14669222)
chr3 (1-101)||(14179684-14179784)
chr3 (1-127)||(14665941-14666067)
chr3 (1-127)||(14735454-14735580)
chr3 (3-127)||(17247947-17248072)
chr3 (3-126)||(14572924-14573048)
chr3 (1-126)||(13209987-13210112)
chr3 (15-127)||(12852037-12852149)
chr3 (3-92)||(11424424-11424513)
chr3 (3-92)||(18438905-18438994)
chr3 (3-74)||(53070360-53070431)
chr3 (3-119)||(25476046-25476163)
chr3 (3-127)||(26687221-26687347)
chr3 (3-92)||(14576494-14576583)
chr3 (3-80)||(14973237-14973314)
chr3 (3-91)||(49389305-49389394)
chr3 (5-127)||(40213384-40213507)
chr3 (3-92)||(9513280-9513370)
chr3 (3-92)||(9521255-9521345)
chr3 (3-92)||(12933971-12934061)
chr3 (3-92)||(17488227-17488317)
chr3 (3-92)||(17499709-17499799)
chr3 (3-80)||(16097713-16097790)
chr3 (1-74)||(20698106-20698179)
chr3 (3-91)||(1644344-1644433)
chr3 (130-206)||(32307903-32307980)
chr3 (13-92)||(13442644-13442724)
chr3 (3-83)||(16104160-16104240)
chr3 (1-72)||(2050860-2050931)
chr3 (5-71)||(324627-324693)
chr3 (3-61)||(17247181-17247239)
chr3 (3-73)||(32308058-32308128)
chr3 (3-69)||(43842572-43842638)
chr3 (130-206)||(12934120-12934197)
chr3 (130-206)||(13210137-13210214)
chr3 (130-206)||(49667893-49667970)
chr3 (1-77)||(14234876-14234952)
chr3 (132-206)||(16104015-16104090)
chr3 (3-126)||(23083022-23083147)
chr3 (3-92)||(49667745-49667834)
chr3 (1-74)||(1465068-1465141)
chr3 (3-52)||(12171778-12171827)
chr3 (1-74)||(12399584-12399657)
chr3 (1-74)||(15471313-15471386)
chr3 (1-74)||(30030217-30030290)
chr3 (130-206)||(1644492-1644569)
chr3 (130-206)||(9513143-9513220)
chr3 (130-206)||(9521118-9521195)
chr3 (134-206)||(12171918-12171991)
chr3 (5-74)||(22109938-22110007)
chr3 (5-74)||(52523390-52523459)
chr3 (1-71)||(23275133-23275203)
chr3 (134-206)||(1465223-1465296)
chr3 (134-206)||(14234725-14234798)
chr3 (1-74)||(14501588-14501661)
chr3 (134-206)||(15471159-15471232)
chr3 (149-206)||(16097564-16097621)
chr3 (149-206)||(49389458-49389515)
chr3 (1-74)||(16809778-16809847)
chr3 (1-77)||(42386797-42386873)
chr3 (135-173)||(14665873-14665912)
chr3 (135-173)||(14735386-14735425)
chr3 (5-47)||(316612-316654)
chr3 (1-74)||(605950-606023)
chr3 (1-74)||(12378385-12378458)
chr3 (13-70)||(23318333-23318390)
chr3 (1-74)||(23412832-23412905)
chr3 (5-46)||(43927597-43927638)
chr3 (5-74)||(45797632-45797701)
[»] scaffold0037 (2 HSPs)
scaffold0037 (15-127)||(80005-80117)
scaffold0037 (156-206)||(22509-22559)
[»] scaffold0192 (2 HSPs)
scaffold0192 (1-127)||(10246-10372)
scaffold0192 (130-191)||(10160-10222)
[»] scaffold0166 (1 HSPs)
scaffold0166 (1-127)||(9493-9619)
[»] scaffold0347 (2 HSPs)
scaffold0347 (15-127)||(364-476)
scaffold0347 (135-173)||(296-335)
[»] scaffold0142 (2 HSPs)
scaffold0142 (3-127)||(17115-17240)
scaffold0142 (42-123)||(7471-7552)
[»] scaffold0124 (1 HSPs)
scaffold0124 (1-127)||(24310-24436)
[»] scaffold0056 (2 HSPs)
scaffold0056 (3-92)||(16876-16965)
scaffold0056 (1-74)||(79021-79094)
[»] scaffold0228 (3 HSPs)
scaffold0228 (3-127)||(4842-4968)
scaffold0228 (3-127)||(12424-12550)
scaffold0228 (3-127)||(22376-22502)
[»] scaffold0839 (1 HSPs)
scaffold0839 (3-127)||(1739-1863)
[»] scaffold0122 (2 HSPs)
scaffold0122 (3-127)||(25726-25851)
scaffold0122 (3-92)||(33155-33245)
[»] scaffold0627 (1 HSPs)
scaffold0627 (3-92)||(275-364)
[»] scaffold0145 (1 HSPs)
scaffold0145 (3-92)||(39130-39219)
[»] scaffold0100 (1 HSPs)
scaffold0100 (3-92)||(20483-20572)
[»] scaffold0413 (2 HSPs)
scaffold0413 (3-127)||(15276-15401)
scaffold0413 (5-75)||(13032-13102)
[»] scaffold0305 (1 HSPs)
scaffold0305 (3-127)||(20737-20863)
[»] scaffold0150 (2 HSPs)
scaffold0150 (3-92)||(32453-32543)
scaffold0150 (130-173)||(32350-32394)
[»] scaffold0028 (2 HSPs)
scaffold0028 (3-92)||(133023-133113)
scaffold0028 (130-206)||(132887-132964)
[»] scaffold0011 (2 HSPs)
scaffold0011 (3-127)||(52246-52372)
scaffold0011 (1-73)||(167649-167721)
[»] scaffold0046 (1 HSPs)
scaffold0046 (122-206)||(11525-11610)
[»] scaffold0876 (1 HSPs)
scaffold0876 (1-80)||(2744-2823)
[»] scaffold0540 (1 HSPs)
scaffold0540 (3-128)||(674-800)
[»] scaffold0352 (1 HSPs)
scaffold0352 (1-126)||(17667-17794)
[»] scaffold0266 (1 HSPs)
scaffold0266 (3-92)||(18619-18709)
[»] scaffold0217 (1 HSPs)
scaffold0217 (3-127)||(16260-16386)
[»] scaffold0556 (3 HSPs)
scaffold0556 (3-80)||(7194-7271)
scaffold0556 (134-206)||(7045-7118)
scaffold0556 (1-74)||(8405-8478)
[»] scaffold0456 (1 HSPs)
scaffold0456 (1-74)||(10096-10169)
[»] scaffold0034 (3 HSPs)
scaffold0034 (3-80)||(51545-51622)
scaffold0034 (134-203)||(32774-32843)
scaffold0034 (5-71)||(32928-32994)
[»] scaffold0001 (2 HSPs)
scaffold0001 (3-91)||(161056-161145)
scaffold0001 (134-206)||(160919-160992)
[»] scaffold0389 (1 HSPs)
scaffold0389 (1-77)||(13267-13343)
[»] scaffold0351 (1 HSPs)
scaffold0351 (1-77)||(16654-16730)
[»] scaffold0503 (1 HSPs)
scaffold0503 (3-74)||(12317-12388)
[»] scaffold0130 (2 HSPs)
scaffold0130 (3-74)||(28925-28996)
scaffold0130 (7-75)||(1368-1436)
[»] scaffold0031 (1 HSPs)
scaffold0031 (3-74)||(20087-20158)
[»] scaffold0023 (4 HSPs)
scaffold0023 (3-127)||(101730-101854)
scaffold0023 (134-206)||(39986-40059)
scaffold0023 (130-206)||(100610-100687)
scaffold0023 (149-206)||(101629-101686)
[»] scaffold0292 (2 HSPs)
scaffold0292 (3-73)||(732-802)
scaffold0292 (5-74)||(3859-3928)
[»] scaffold1257 (1 HSPs)
scaffold1257 (130-206)||(2026-2103)
[»] scaffold0718 (1 HSPs)
scaffold0718 (1-74)||(4801-4874)
[»] scaffold0598 (1 HSPs)
scaffold0598 (1-74)||(722-795)
[»] scaffold0427 (1 HSPs)
scaffold0427 (1-74)||(13873-13946)
[»] scaffold0358 (2 HSPs)
scaffold0358 (1-70)||(318-387)
scaffold0358 (1-70)||(5094-5163)
[»] scaffold0235 (2 HSPs)
scaffold0235 (1-74)||(11183-11256)
scaffold0235 (1-74)||(14028-14101)
[»] scaffold0211 (2 HSPs)
scaffold0211 (130-206)||(28619-28696)
scaffold0211 (3-73)||(28470-28540)
[»] scaffold0121 (1 HSPs)
scaffold0121 (8-92)||(8198-8283)
[»] scaffold0102 (2 HSPs)
scaffold0102 (3-80)||(19649-19726)
scaffold0102 (134-206)||(19500-19573)
[»] scaffold1842 (1 HSPs)
scaffold1842 (1-73)||(719-791)
[»] scaffold0080 (1 HSPs)
scaffold0080 (3-75)||(40299-40371)
[»] scaffold0810 (2 HSPs)
scaffold0810 (3-74)||(3321-3392)
scaffold0810 (134-173)||(3199-3239)
[»] scaffold0647 (1 HSPs)
scaffold0647 (3-74)||(5782-5853)
[»] scaffold0395 (2 HSPs)
scaffold0395 (3-74)||(623-694)
scaffold0395 (1-71)||(8151-8221)
[»] scaffold0021 (4 HSPs)
scaffold0021 (3-74)||(62950-63021)
scaffold0021 (3-127)||(124919-125042)
scaffold0021 (145-203)||(136191-136249)
scaffold0021 (145-203)||(144899-144957)
[»] scaffold1137 (2 HSPs)
scaffold1137 (3-92)||(1962-2052)
scaffold1137 (130-206)||(2111-2188)
[»] scaffold0530 (2 HSPs)
scaffold0530 (4-69)||(690-755)
scaffold0530 (134-206)||(847-920)
[»] scaffold0490 (1 HSPs)
scaffold0490 (1-74)||(2330-2403)
[»] scaffold0403 (1 HSPs)
scaffold0403 (1-74)||(5226-5299)
[»] scaffold0125 (2 HSPs)
scaffold0125 (3-91)||(45450-45539)
scaffold0125 (134-206)||(45604-45677)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-74)||(32442-32515)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1-74)||(21279-21352)
[»] scaffold0247 (1 HSPs)
scaffold0247 (3-71)||(6489-6557)
[»] scaffold0207 (2 HSPs)
scaffold0207 (3-74)||(2305-2376)
scaffold0207 (134-206)||(2457-2530)
[»] scaffold0120 (3 HSPs)
scaffold0120 (13-80)||(16470-16537)
scaffold0120 (1-80)||(32618-32697)
scaffold0120 (1-80)||(46308-46387)
[»] scaffold0070 (1 HSPs)
scaffold0070 (1-80)||(4906-4985)
[»] scaffold0042 (1 HSPs)
scaffold0042 (3-74)||(23963-24034)
[»] scaffold0639 (1 HSPs)
scaffold0639 (3-73)||(8865-8935)
[»] scaffold0628 (2 HSPs)
scaffold0628 (3-92)||(2464-2554)
scaffold0628 (130-206)||(2612-2689)
[»] scaffold0078 (2 HSPs)
scaffold0078 (4-74)||(10917-10987)
scaffold0078 (141-203)||(10766-10828)
[»] scaffold1765 (1 HSPs)
scaffold1765 (134-203)||(1321-1390)
[»] scaffold0484 (1 HSPs)
scaffold0484 (1-74)||(1292-1365)
[»] scaffold0476 (2 HSPs)
scaffold0476 (130-206)||(13002-13079)
scaffold0476 (5-73)||(13233-13301)
[»] scaffold0475 (2 HSPs)
scaffold0475 (3-80)||(9459-9536)
scaffold0475 (135-205)||(9312-9382)
[»] scaffold0309 (1 HSPs)
scaffold0309 (1-74)||(6988-7061)
[»] scaffold0231 (1 HSPs)
scaffold0231 (3-68)||(23277-23342)
[»] scaffold0165 (3 HSPs)
scaffold0165 (1-74)||(3859-3932)
scaffold0165 (1-74)||(7923-7996)
scaffold0165 (5-74)||(27305-27374)
[»] scaffold0138 (2 HSPs)
scaffold0138 (1-74)||(13329-13402)
scaffold0138 (134-191)||(13190-13247)
[»] scaffold0116 (2 HSPs)
scaffold0116 (1-74)||(43443-43516)
scaffold0116 (1-74)||(47363-47436)
[»] scaffold0114 (1 HSPs)
scaffold0114 (1-74)||(15135-15208)
[»] scaffold0064 (1 HSPs)
scaffold0064 (1-74)||(47364-47437)
[»] scaffold0020 (2 HSPs)
scaffold0020 (1-74)||(15489-15562)
scaffold0020 (134-206)||(15644-15717)
[»] scaffold0507 (2 HSPs)
scaffold0507 (1-73)||(7716-7788)
scaffold0507 (133-203)||(7870-7940)
[»] scaffold0278 (2 HSPs)
scaffold0278 (3-71)||(5985-6053)
scaffold0278 (134-205)||(5879-5951)
[»] scaffold0243 (2 HSPs)
scaffold0243 (4-72)||(5784-5852)
scaffold0243 (134-205)||(5935-6007)
[»] scaffold0151 (1 HSPs)
scaffold0151 (3-67)||(10540-10604)
[»] scaffold0193 (1 HSPs)
scaffold0193 (3-74)||(13589-13660)
[»] scaffold0586 (1 HSPs)
scaffold0586 (1-71)||(2245-2315)
[»] scaffold0555 (3 HSPs)
scaffold0555 (1-63)||(10227-10289)
scaffold0555 (133-206)||(10353-10426)
scaffold0555 (1-92)||(950-1041)
[»] scaffold0003 (1 HSPs)
scaffold0003 (3-127)||(339612-339737)
[»] scaffold1984 (2 HSPs)
scaffold1984 (134-206)||(364-437)
scaffold1984 (3-80)||(513-590)
[»] scaffold0621 (3 HSPs)
scaffold0621 (13-74)||(6926-6987)
scaffold0621 (134-205)||(6771-6843)
scaffold0621 (137-203)||(8708-8774)
[»] scaffold0333 (4 HSPs)
scaffold0333 (1-74)||(7002-7075)
scaffold0333 (1-74)||(14382-14455)
scaffold0333 (149-191)||(6862-6904)
scaffold0333 (149-191)||(14242-14284)
[»] scaffold0320 (1 HSPs)
scaffold0320 (5-74)||(12384-12453)
[»] scaffold0032 (1 HSPs)
scaffold0032 (1-74)||(51957-52030)
[»] scaffold0010 (3 HSPs)
scaffold0010 (134-206)||(130141-130214)
scaffold0010 (3-74)||(130296-130367)
scaffold0010 (5-71)||(60301-60367)
[»] scaffold0022 (1 HSPs)
scaffold0022 (5-74)||(80727-80796)
[»] scaffold0012 (1 HSPs)
scaffold0012 (13-74)||(227881-227942)
[»] scaffold0008 (1 HSPs)
scaffold0008 (134-206)||(14509-14582)
[»] scaffold0040 (2 HSPs)
scaffold0040 (1-74)||(103242-103315)
scaffold0040 (135-203)||(103452-103520)
[»] scaffold0423 (1 HSPs)
scaffold0423 (1-40)||(10931-10970)
[»] scaffold0174 (1 HSPs)
scaffold0174 (1-44)||(18113-18156)
[»] scaffold0357 (2 HSPs)
scaffold0357 (1-71)||(3162-3232)
scaffold0357 (5-74)||(13596-13665)
[»] scaffold0123 (1 HSPs)
scaffold0123 (5-71)||(25574-25640)
[»] scaffold0076 (1 HSPs)
scaffold0076 (4-74)||(24182-24252)
[»] scaffold0004 (1 HSPs)
scaffold0004 (5-71)||(332784-332850)
[»] scaffold0601 (1 HSPs)
scaffold0601 (5-74)||(7119-7188)
[»] scaffold0139 (1 HSPs)
scaffold0139 (1-74)||(38762-38835)
[»] scaffold0098 (1 HSPs)
scaffold0098 (1-74)||(29150-29223)
[»] scaffold0005 (1 HSPs)
scaffold0005 (5-74)||(268117-268186)


Alignment Details
Target: chr7 (Bit Score: 139; Significance: 6e-73; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 28504960 - 28505186
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 100  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28504960 aaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 28505059  T
Q  101 aatctgaccgaactcgccatg---------------------gcgagcgtttgtgttacagaatgcctttttaggttaaatgcgatctttgtcgtttgag 179  Q
    |||||||||||||||||||||                     ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  28505060 aatctgaccgaactcgccatggcgagcagaggctctcgcctcgcgagcgtttgtgttacagaatgcctttttaggttgaatgcgatctttgtcgttcgag 28505159  T
Q  180 ttgatgtgagtttatcttagaggttag 206  Q
    |||||||||||| ||||||||||||||    
T  28505160 ttgatgtgagttgatcttagaggttag 28505186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 34201245 - 34201019
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 100  Q
    ||||||||||| ||||||||| |||||||||| ||||||| || | |||||||| ||||||||||||||||||| ||||||||||||||||||||| |||    
T  34201245 aaccttagatgcttttgagtgtctgaacatgtctaataatgatcaagaaagaatttagaatgagattgaacctgtaaagacttagaatgaaaatttggag 34201146  T
Q  101 aatctgaccgaactcgccatggc---------------------gagcgtttgtgttacagaatgcctttttaggttaaatgcgatctttgtcgtttgag 179  Q
    |||||||| ||||||||||||||                     |||||||||||||||| ||||||||||||||||||||||||||  |||| || |||    
T  34201145 aatctgactgaactcgccatggcgagcagaggctcttgcctcgcgagcgtttgtgttacataatgcctttttaggttaaatgcgatccctgtcattcgag 34201046  T
Q  180 ttgatgtgagtttatcttagaggttag 206  Q
    |||||||||||| ||||||||||||||    
T  34201045 ttgatgtgagttgatcttagaggttag 34201019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 15754546 - 15754673
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaa-tttaga 99  Q
    ||||||||||| |||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||| ||| |||||||||||||| ||| ||    
T  15754546 aaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaagtagaatgagattgaacctggaaaaacttagaatgaaaacttttga 15754645  T
Q  100 gaatctgaccgaactcgccatggcgagc 127  Q
    ||||||||||||||| |||| |||||||    
T  15754646 gaatctgaccgaacttgccacggcgagc 15754673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 39267305 - 39267431
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 100  Q
    ||||||| |||  ||||||||||||||||||| ||||| | ||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||| |||    
T  39267305 aaccttatatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggag 39267404  T
Q  101 aatctgaccgaactcgccatggcgagc 127  Q
    |||||||| ||||||||||||||||||    
T  39267405 aatctgactgaactcgccatggcgagc 39267431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 18302640 - 18302514
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 100  Q
    |||||||||||   |||||||||||||||||| ||||| | ||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||| ||     
T  18302640 aaccttagatgcccttgagtgcctgaacatgtctaatatttattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggat 18302541  T
Q  101 aatctgaccgaactcgccatggcgagc 127  Q
    |||||||| ||||||||||||||||||    
T  18302540 aatctgactgaactcgccatggcgagc 18302514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 11995831 - 11995915
Alignment:
Q  122 gcgagcgtttgtgttacagaatgcctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11995831 gcgagcatttgtgttacagaatgcctttttaggttaaatgcgatctttgtcgttcgagttgatgtgagtttatcttagaggttag 11995915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 9751209 - 9751335
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 100  Q
    |||||||||||  ||||||||||||||||||| ||||| | ||||||||||||||||| ||||| ||||||||| ||||||||||||||||| ||| |||    
T  9751209 aaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgaggttgaacctggaaagacttagaatgaaactttggag 9751308  T
Q  101 aatctgaccgaactcgccatggcgagc 127  Q
    ||| |||| ||||||||||||| ||||    
T  9751309 aatttgactgaactcgccatggtgagc 9751335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 38227940 - 38227815
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaa 102  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||   ||     
T  38227940 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagatttagaatgaaactttttggat 38227841  T
Q  103 tctgacc-gaactcgccatggcgagc 127  Q
    ||||||| |||||||||| |||||||    
T  38227840 tctgacctgaactcgccacggcgagc 38227815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 2831965 - 2832090
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 100  Q
    |||||||||||  ||||||||||||||||||| ||||| | ||||||||||||||||| ||||||||||||||  |||||||||||||| || ||| |||    
T  2831965 aaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctagaaagacttagaatg-aactttggag 2832063  T
Q  101 aatctgaccgaactcgccatggcgagc 127  Q
    |||||||| |||||| |||||||||||    
T  2832064 aatctgactgaactcaccatggcgagc 2832090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 17061621 - 17061745
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga-cttagaatgaaaatttagaga 101  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||  ||||||| |||| || ||||    
T  17061621 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggatagattttagaat-aaaactttgaga 17061719  T
Q  102 atctgacc-gaactcgccatggcgag 126  Q
    |||||||| |||||||| ||||||||    
T  17061720 atctgacctgaactcgcgatggcgag 17061745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 14 - 127
Target Start/End: Complemental strand, 44116953 - 44116840
Alignment:
Q  14 tttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaatctgacc-gaa 112  Q
    ||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||| | ||||| ||||||||||| ||| | |||||||||| |||    
T  44116953 tttgagtccctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacccggaaagatttagaatgaaacttt-gggaatctgacctgaa 44116855  T
Q  113 ctcgccatggcgagc 127  Q
    |||||||||||||||    
T  44116854 ctcgccatggcgagc 44116840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 12756378 - 12756449
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  12756378 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 12756449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 9509649 - 9509524
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaaatttagaga 101  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| ||||| | |||||||||| ||  | ||    
T  9509649 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggga 9509550  T
Q  102 atctgacc-gaactcgccatggcgag 126  Q
     ||||||| |||||||||| ||||||    
T  9509549 ttctgacctgaactcgccacggcgag 9509524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 3564026 - 3564142
Alignment:
Q  4 cttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaaatttagagaa 102  Q
    |||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| ||||| | |||||||||  ||| || ||    
T  3564026 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaacttttgga-aa 3564124  T
Q  103 tctgacc-gaactcgcca 119  Q
    ||||||| ||||||||||    
T  3564125 tctgacctgaactcgcca 3564142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 16385917 - 16385990
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||    
T  16385917 aaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 16385990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 44014633 - 44014557
Alignment:
Q  4 cttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga 80  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||| || |||||||||||||||||| |||||    
T  44014633 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaaga 44014557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 12699292 - 12699215
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga 80  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| |||| |||||||||| |||||    
T  12699292 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgaaattgaacctggaaaga 12699215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 40443839 - 40443766
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||| ||| |||||||||||||||    
T  40443839 aaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacctg 40443766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 2 - 127
Target Start/End: Original strand, 15143697 - 15143823
Alignment:
Q  2 accttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga-cttagaatgaaaatttagag 100  Q
    ||||||||||  ||||||||||||||||||| ||||||| ||||||||||| | ||||||||||||||||||| |||||  |||||||| || ||| | |    
T  15143697 accttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagattttagaatgagattgaacctggaaagattttagaatg-aacttttgtg 15143795  T
Q  101 aatctgacc-gaactcgccatggcgagc 127  Q
    | ||||||| | ||||||||||||||||    
T  15143796 attctgacctgtactcgccatggcgagc 15143823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 810790 - 810867
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga 80  Q
    |||||||||||||||||||||||||||| | ||||||| ||||||||||| || ||||| |||||||||||| |||||    
T  810790 ccttagatgtttttgagtgcctgaacatatctaataatgattaggaaagattggagaataagattgaacctggaaaga 810867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 27847503 - 27847576
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| |||||||||||||||||||| |||| || ||||||||||||| ||| |||||||||||||||    
T  27847503 aaccttagatgcttttgagtgcctgaacatgtctaattatgattaggaaagaatttaggatgagattgaacctg 27847576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 16324313 - 16324241
Alignment:
Q  134 gttacagaatgcctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||||||| |||||||||||| |||| ||||||  |||||||||||||||| ||||||||||||||    
T  16324313 gttacagaatgccttgttaggttaaatgtgatccttgtcgcatgagttgatgtgagttgatcttagaggttag 16324241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 22073377 - 22073306
Alignment:
Q  2 accttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacct 73  Q
    |||||||| |||||||||||||||||||||| ||||||| ||||| ||||| | ||||||||||||||||||    
T  22073377 accttagaggtttttgagtgcctgaacatgtgtaataatgattagaaaagattctagaatgagattgaacct 22073306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 16056635 - 16056566
Alignment:
Q  134 gttacagaatgcctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggt 203  Q
    ||||||||||||||| |||||||||||||||||||||| |   ||||||||||||||| |||||||||||    
T  16056635 gttacagaatgccttgttaggttaaatgcgatctttgtagcacgagttgatgtgagttgatcttagaggt 16056566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 26212447 - 26212374
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||  ||||||||||||||||||| ||||| | |||||| |||||||||| |||||||||||||||    
T  26212447 aaccttagatgcctttgagtgcctgaacatgtctaatatttattaggtaagaatgtaggatgagattgaacctg 26212374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 47832270 - 47832201
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaa 70  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||| || ||| | ||||||||    
T  47832270 aaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattaagattgaa 47832201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 11995717 - 11995768
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaaga 52  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  11995717 aaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaaga 11995768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 68053 - 67980
Alignment:
Q  134 gttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||||||| |||||||||||||||||| ||||||    |||||||||||||| ||||||||||||||    
T  68053 gttacagaatgccttgtttaggttaaatgcgatccttgtcgcacaagttgatgtgagttgatcttagaggttag 67980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 2279781 - 2279850
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||| |||||||||||||||||||  ||||||| ||||||||||| | |||| ||||||||||||||    
T  2279781 ttagatgattttgagtgcctgaacatgcataataatgattaggaaagattttagattgagattgaacctg 2279850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 12255454 - 12255523
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||| |||||||||| ||||||||| ||||||| ||||||||||| | |||| ||||||||||||||    
T  12255454 ttagatgattttgagtgcttgaacatgtataataatgattaggaaagattctagattgagattgaacctg 12255523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 130 - 206
Target Start/End: Original strand, 15754697 - 15754774
Alignment:
Q  130 ttgtgttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    |||| ||||| |||||||| |||||||||||||||||||||||||   ||||||||||||||| ||| ||||||||||    
T  15754697 ttgttttacataatgccttgtttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcctagaggttag 15754774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 16219375 - 16219448
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||||||||||||| || ||| ||| ||||||| ||||||||||| | |||| ||||||||||||||    
T  16219375 aaccttagatgtttttgagtgtctaaacttgtataataatgattaggaaagattttagattgagattgaacctg 16219448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 16219530 - 16219602
Alignment:
Q  134 gttacagaatgcctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||||||| ||||||||||||||||||||||||    ||||||||| |||| ||||| ||||||||    
T  16219530 gttacagaatgccttgttaggttaaatgcgatctttgtcgcacaagttgatgttagttgatcttggaggttag 16219602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 68206 - 68135
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||| ||||||| ||||||||||| |||| ||||||| ||||||||||| || ||| ||||||||||||||    
T  68206 ccttaaatgttttcgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctg 68135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 76 - 123
Target Start/End: Original strand, 11995764 - 11995811
Alignment:
Q  76 aaagacttagaatgaaaatttagagaatctgaccgaactcgccatggc 123  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  11995764 aaagacttagaatgaaaatttggagaatctgactgaactcgccatggc 11995811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 203
Target Start/End: Complemental strand, 15116785 - 15116719
Alignment:
Q  137 acagaatgcctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggt 203  Q
    |||||||||||| |||||||||||| || ||||||||   ||||||||||||||| |||||||||||    
T  15116785 acagaatgccttgttaggttaaatgtgacctttgtcgcacgagttgatgtgagttgatcttagaggt 15116719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 21064821 - 21064891
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaac 71  Q
    |||||||||||||| |||| ||||||||||||  |||||| ||||||||| | | ||||||||||||||||    
T  21064821 aaccttagatgtttatgagggcctgaacatgtacaataatgattaggaaatattttagaatgagattgaac 21064891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 9389354 - 9389427
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||| |||||||||||||| ||| || ||| |||| || ||||||||||| |||||| ||||||||||||||    
T  9389354 aaccttggatgtttttgagtgtctggacttgtataatgatgattaggaaagattgtagattgagattgaacctg 9389427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 9389509 - 9389582
Alignment:
Q  134 gttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||||||| ||||||||||| ||||||||||||    ||||||||||||||| ||||| ||||||||    
T  9389509 gttacagaatgccttgtttaggttaaaagcgatctttgtcacacgagttgatgtgagttgatcttggaggttag 9389582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 16324460 - 16324395
Alignment:
Q  9 atgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||| || ||  ||||||||||||||    
T  16324460 atgtttttgagtgcttgaacatgtctaataatgattaggaaagattggagtttgagattgaacctg 16324395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 18006101 - 18006052
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaaga 52  Q
    |||||||||||||||||||||||||||||| ||||||| |||| ||||||    
T  18006101 ccttagatgtttttgagtgcctgaacatgtctaataatgattatgaaaga 18006052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 22073223 - 22073154
Alignment:
Q  134 gttacagaatgcctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggt 203  Q
    |||||||||||| || ||||||||||||||||| ||||||   ||||||||||||||| |||||| ||||    
T  22073223 gttacagaatgctttgttaggttaaatgcgatccttgtcgcacgagttgatgtgagttgatcttacaggt 22073154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 47832116 - 47832043
Alignment:
Q  134 gttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    |||||||||||| || ||||||||||||| |||||||||||   ||||||||||||||| ||||| ||||||||    
T  47832116 gttacagaatgctttgtttaggttaaatgtgatctttgtcggacgagttgatgtgagttgatcttggaggttag 47832043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 14045281 - 14045213
Alignment:
Q  6 tagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||||||||||||| |||| ||||||| |||||| |||  | |||| ||||||||||||||    
T  14045281 tagatgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctg 14045213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 14355311 - 14355243
Alignment:
Q  6 tagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||||||||||||| |||| ||||||| |||||| |||  | |||| ||||||||||||||    
T  14355311 tagatgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctg 14355243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 2529636 - 2529710
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctga 75  Q
    ||||||||||| ||||||||||||||| |||| ||||||| |||||| |||  | |||| |||||||| ||||||    
T  2529636 aaccttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattggacctga 2529710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 9177252 - 9177318
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaac 71  Q
    |||||||||||||||||||||||||||| ||| ||| |||||| |||  | |||| |||||||||||    
T  9177252 ttagatgtttttgagtgcctgaacatgtataagaatgattaggtaagtttttagattgagattgaac 9177318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 137 - 203
Target Start/End: Complemental strand, 15113248 - 15113182
Alignment:
Q  137 acagaatgcctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggt 203  Q
    |||| ||||||| |||||||||||| || ||||||||   ||||||||||||||| |||||||||||    
T  15113248 acaggatgccttgttaggttaaatgtgacctttgtcgcacgagttgatgtgagttgatcttagaggt 15113182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 1867650 - 1867718
Alignment:
Q  6 tagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| |||||||||| |||| ||||||| |||||| |||  | |||| ||||||||||||||    
T  1867650 tagatgttttttagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctg 1867718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 173
Target Start/End: Original strand, 9751359 - 9751403
Alignment:
Q  130 ttgtgttacagaatgcctt-tttaggttaaatgcgatctttgtcg 173  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||    
T  9751359 ttgtgttacagaatgccttgtttagtttaaatgcgatctttgtcg 9751403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 14036731 - 14036664
Alignment:
Q  6 tagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacct 73  Q
    |||||||||||||||||||||| ||||  |||||| |||||| |||  | |||| |||||||||||||    
T  14036731 tagatgtttttgagtgcctgaatatgtaaaataatgattaggcaagtttttagattgagattgaacct 14036664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 14346761 - 14346694
Alignment:
Q  6 tagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacct 73  Q
    |||||||||||||||||||||| ||||  |||||| |||||| |||  | |||| |||||||||||||    
T  14346761 tagatgtttttgagtgcctgaatatgtaaaataatgattaggcaagtttttagattgagattgaacct 14346694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 173
Target Start/End: Original strand, 2529864 - 2529906
Alignment:
Q  132 gtgttacagaatgccttt-ttaggttaaatgcgatctttgtcg 173  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  2529864 gtgttacagaatgccttaattaggttaaatgcgatctttgtcg 2529906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 12901852 - 12901794
Alignment:
Q  16 tgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||||||||| ||||||| |||||| |||  | |||| ||||||||||||||    
T  12901852 tgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctg 12901794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 191
Target Start/End: Complemental strand, 44014481 - 44014423
Alignment:
Q  134 gttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtt 191  Q
    ||||||||||||||| |||||||||||||||||| ||||||   || ||||||||||||    
T  44014481 gttacagaatgccttgtttaggttaaatgcgatcattgtcgcacgaattgatgtgagtt 44014423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 11880712 - 11880639
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||||||||||||||| || ||||||| |||| ||||    | ||  |||||||||||||||||||    
T  11880712 aaccttagatgtttttgagtgcctaaagatgtttattaatgattaaatgataacttagaatgagattgaacctg 11880639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 16056778 - 16056717
Alignment:
Q  13 ttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||| || ||||||||||| ||||||| | ||||||||| | |||| ||||||||||||||    
T  16056778 ttttgtgtacctgaacatgtataataatgaataggaaagattttagattgagattgaacctg 16056717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 135; Significance: 2e-70; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 5865936 - 5866162
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 100  Q
    ||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5865936 aaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 5866035  T
Q  101 aatctgaccgaactcgccatg---------------------gcgagcgtttgtgttacagaatgcctttttaggttaaatgcgatctttgtcgtttgag 179  Q
    |||||||||||||||||||||                     ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  5866036 aatctgaccgaactcgccatggcgagcagaggctctcgcctcgcgagcgtttgtgttacagaatgcctttttaggttgaatgcgatctttgtcgttcgag 5866135  T
Q  180 ttgatgtgagtttatcttagaggttag 206  Q
    |||||||||||| ||||||||||||||    
T  5866136 ttgatgtgagttgatcttagaggttag 5866162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 17141375 - 17141149
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 100  Q
    ||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17141375 aaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 17141276  T
Q  101 aatctgaccgaactcgccatggc---------------------gagcgtttgtgttacagaatgcctttttaggttaaatgcgatctttgtcgtttgag 179  Q
    |||| ||||||||||||||||||                     ||||||||||||||||||| ||||||||||||| ||||||||||||||| || |||    
T  17141275 aatcagaccgaactcgccatggcgagcagaggctctcgcctcgcgagcgtttgtgttacagaacgcctttttaggttgaatgcgatctttgtcattcgag 17141176  T
Q  180 ttgatgtgagtttatcttagaggttag 206  Q
    |||||||||||| ||||||||||||||    
T  17141175 ttgatgtgagttgatcttagaggttag 17141149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 21255681 - 21255455
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 100  Q
    ||||||||||| |||||||||||  ||||||| ||||||| ||||||||||||||||| ||||||||||||||| |||||||| |||||||||||| |||    
T  21255681 aaccttagatgcttttgagtgcccaaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagacttggaatgaaaatttggag 21255582  T
Q  101 aatctgaccgaactcgccatggc---------------------gagcgtttgtgttacagaatgcctttttaggttaaatgcgatctttgtcgtttgag 179  Q
    |||||||||||||||||||||||                     |||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  21255581 aatctgaccgaactcgccatggcgagcagcggctctcgcctcgcgagcatttgtattacagaatgcctttttaggttaaatgcgatctttgtcgttcgag 21255482  T
Q  180 ttgatgtgagtttatcttagaggttag 206  Q
    |||||||||||||||||||||||||||    
T  21255481 ttgatgtgagtttatcttagaggttag 21255455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 21491454 - 21491228
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 100  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  21491454 aaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctagaaagacttagaatgaaaatttagag 21491355  T
Q  101 aatctgaccgaactcgccatgg---------------------cgagcgtttgtgttacagaatgcctttttaggttaaatgcgatctttgtcgtttgag 179  Q
    ||||||||| |||| |||||||                     |||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||    
T  21491354 aatctgaccaaacttgccatggcgagtagaggctcttgcctcgcgagcgtttgtgttacagaatgcctttttaggttgaatgcgatctttgtagttcgag 21491255  T
Q  180 ttgatgtgagtttatcttagaggttag 206  Q
    || ||||||||| ||||||||||||||    
T  21491254 ttaatgtgagttgatcttagaggttag 21491228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 21249843 - 21249617
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 100  Q
    ||||||||||| |||||||||||  ||||||| ||||||| ||||||||||||||||| |||||| |||||||| |||||||| |||||||||||| |||    
T  21249843 aaccttagatgcttttgagtgcccaaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaaagacttggaatgaaaatttggag 21249744  T
Q  101 aatctgaccgaactcgccatggc---------------------gagcgtttgtgttacagaatgcctttttaggttaaatgcgatctttgtcgtttgag 179  Q
    |||||||||||||||||||||||                     |||| |||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  21249743 aatctgaccgaactcgccatggcgagcagaggctctcgcctcgcgagcatttgtgttacagaatgcctttttaggttaaatgcgatctttgtcgttcaag 21249644  T
Q  180 ttgatgtgagtttatcttagaggttag 206  Q
    |||||||||||||||||||||||||||    
T  21249643 ttgatgtgagtttatcttagaggttag 21249617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 3 - 125
Target Start/End: Complemental strand, 23649013 - 23648890
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaa-atttagaga 101  Q
    ||||||||| ||||||||| |||||||||| ||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||| |  |    
T  23649013 ccttagatgcttttgagtgactgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctgaaaagacttagaatgaaacattttggaa 23648914  T
Q  102 atctgaccgaactcgccatggcga 125  Q
     |||||||||||||||||||||||    
T  23648913 ttctgaccgaactcgccatggcga 23648890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 41598644 - 41598519
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga-cttagaatgaaaatttagaga 101  Q
    ||||||||| |||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||| |||||  ||||||||||| ||| | ||    
T  41598644 ccttagatgcttttgagtgcctgaacatgtctaataatgattatgaaagaatgtagaatgagattgaacctggaaagattttagaatgaaacttt-ggga 41598546  T
Q  102 atctgacc-gaactcgccatggcgagc 127  Q
    |||||||| ||||||||||||||||||    
T  41598545 atctgacctgaactcgccatggcgagc 41598519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 21923589 - 21923678
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaa 92  Q
    ||||||||| ||||||||| |||||||||| ||||||| ||||||| ||||||||| ||||||||||||||||||||| |||||||||||    
T  21923589 ccttagatgcttttgagtgtctgaacatgtctaataatgattaggacagaatgtaggatgagattgaacctgaaaagatttagaatgaaa 21923678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 20536670 - 20536543
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaaatttaga 99  Q
    ||||||||||| |||||||||||||||||||| | ||||| ||||||||||||||||| ||||||||||||||| ||||| | |||||||||| ||  |     
T  20536670 aaccttagatgcttttgagtgcctgaacatgtctgataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttatgg 20536571  T
Q  100 gaatctgacc-gaactcgccatggcgag 126  Q
    || ||||||| |||||||||| ||||||    
T  20536570 gattctgacctgaactcgccacggcgag 20536543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 6759717 - 6759591
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga-cttagaatgaaaatttagaga 101  Q
    ||||||||| |||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||| || ||| |  ||||||||||| ||| |  |    
T  6759717 ccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacttggaaatattttagaatgaaacttttggaa 6759618  T
Q  102 atctgacc-gaactcgccatggcgagc 127  Q
    |||||||| |||||||||| |||||||    
T  6759617 atctgacctgaactcgccacggcgagc 6759591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 18878898 - 18878988
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaa 92  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| ||||| | ||||||||||    
T  18878898 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaa 18878988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 7373209 - 7373084
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaaatttagaga 101  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| |||| |||||||||| ||||| | |||||||||| ||  || |    
T  7373209 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgaaattgaacctggaaagattgtagaatgaaacttgtgaaa 7373110  T
Q  102 atctgacc-gaactcgccatggcgag 126  Q
     ||||||| |||||||||| ||||||    
T  7373109 ttctgacctgaactcgccacggcgag 7373084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 16092002 - 16092079
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga 80  Q
    ||||||||| |||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||    
T  16092002 ccttagatgcttttgagtgcatgaacatgtctaataatgattaggaaagaatgtagaatgagattaaacctgaaaaga 16092079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 23406841 - 23406716
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaaatttagaga 101  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||| ||||| ||||| | |||||||||| ||  | ||    
T  23406841 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagattgtagaatgaaacttgtggga 23406742  T
Q  102 atctgacc-gaactcgccatggcgag 126  Q
     ||||||| |||||||||| ||||||    
T  23406741 ttctgacctgaactcgccacggcgag 23406716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 28648705 - 28648794
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaa 92  Q
    ||||||||| |||||||||||||||||||| ||||||| |||| |||||||||||| |||||||||||| || ||||| |||||||||||    
T  28648705 ccttagatgcttttgagtgcctgaacatgtctaataatgattatgaaagaatgtaggatgagattgaacatggaaagatttagaatgaaa 28648794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 45130690 - 45130763
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||    
T  45130690 aaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 45130763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 22627195 - 22627125
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacct 73  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  22627195 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 22627125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 18818071 - 18818148
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga 80  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||| ||||||| ||||||||||||||| |||||    
T  18818071 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaaaga 18818148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 21674157 - 21674071
Alignment:
Q  11 gtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga-cttagaatgaaaattt 96  Q
    |||||||||||||||||||||| ||||||| ||||||||||| || |||||||||||||||||| |||||  |||||||||| ||||    
T  21674157 gtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaatattt 21674071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 22875525 - 22875400
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga-cttagaatgaaaatttagaga 101  Q
    ||||||||| ||||||| | || ||||||||||||||| ||||||||||| ||||||| ||| ||||||||| |||||  ||||||||||| ||| | ||    
T  22875525 ccttagatgcttttgagcgtctaaacatgtttaataatgattaggaaagattgtagaacgaggttgaacctggaaagattttagaatgaaacttt-ggga 22875427  T
Q  102 atctgacc-gaactcgccatggcgagc 127  Q
    |||||||| |||||||||||| |||||    
T  22875426 atctgacctgaactcgccatgacgagc 22875400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 26355359 - 26355448
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagac-ttagaatgaa 91  Q
    ||||| |||||||||||||||||||||||| ||||||| ||||||| ||| || ||| |||||||||||||| |||||| ||||||||||    
T  26355359 ccttaaatgtttttgagtgcctgaacatgtctaataatgattaggagagattgaagattgagattgaacctggaaagactttagaatgaa 26355448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 31971706 - 31971633
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| ||||| |||||||||||||| ||||||| |||||||||| |||||| |||||||||||||||    
T  31971706 aaccttagatgcttttgtgtgcctgaacatgtctaataatgattaggaaaggatgtaggatgagattgaacctg 31971633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 6520830 - 6520754
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaa 77  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||| || ||| | ||| |||||||||||    
T  6520830 aaccttagatgtttttgagtgtctgaacatgtctaataataattaggaaagattggagattaagactgaacctgaaa 6520754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 21918669 - 21918742
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| ||| |||||||||||||||| ||||||| ||||| ||||||||||| | |||||||||||||    
T  21918669 aaccttagatgctttggagtgcctgaacatgtctaataatgattagaaaagaatgtaggaagagattgaacctg 21918742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 25362810 - 25362883
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||  |||||||| |||||||||  ||||||| ||||||||||||||||| |||||||||||||||    
T  25362810 aaccttagatgcctttgagtgactgaacatgactaataatgattaggaaagaatgtaggatgagattgaacctg 25362883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 38854910 - 38854983
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||| || ||| | ||||| ||||||    
T  38854910 aaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattaagatttaacctg 38854983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 39834294 - 39834221
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||||||||||||||| ||| ||| | ||||| ||||||||||| |||||| ||||||||||||||    
T  39834294 aaccttagatgtttttgagtgcctaaacttgtatgataatgattaggaaagattgtagattgagattgaacctg 39834221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 16199317 - 16199389
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacct 73  Q
    |||||| |||| |||||||||||| ||||||| | ||||| ||||||||||||||||| ||||||||||||||    
T  16199317 aaccttggatgcttttgagtgccttaacatgtcttataatgattaggaaagaatgtaggatgagattgaacct 16199389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 135 - 206
Target Start/End: Complemental strand, 6520674 - 6520603
Alignment:
Q  135 ttacagaatgcctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||| || |||||||||||||||||||||| |  |||||||||||||||| ||||| ||||||||    
T  6520674 ttacagaatgctttgttaggttaaatgcgatctttgttgcatgagttgatgtgagttgatcttggaggttag 6520603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 21414886 - 21414956
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaac 71  Q
    ||||||||||||||||||||||||||| |||   | |||| ||||||||||| ||||||||||||||||||    
T  21414886 aaccttagatgtttttgagtgcctgaagatgcacactaatgattaggaaagattgtagaatgagattgaac 21414956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 21285905 - 21285836
Alignment:
Q  134 gttacagaatgcctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggt 203  Q
    |||||||||||| || |||||||||||||||||||| |||   ||||||||||||||| |||||||||||    
T  21285905 gttacagaatgctttgttaggttaaatgcgatctttatcgcacgagttgatgtgagttgatcttagaggt 21285836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 26355512 - 26355585
Alignment:
Q  134 gttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||||||| |||| ||||||||||||||||||||    |||||||||||||| ||||||||||||||    
T  26355512 gttacagaatgccttgtttatgttaaatgcgatctttgtcgcacaagttgatgtgagttgatcttagaggttag 26355585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 134 - 205
Target Start/End: Original strand, 23760654 - 23760725
Alignment:
Q  134 gttacagaatgcctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggtta 205  Q
    |||||| |||||||| ||||| ||||||||||||||||||    |||||||||||||| |||||||||||||    
T  23760654 gttacaaaatgccttgttaggataaatgcgatctttgtcgcacaagttgatgtgagttgatcttagaggtta 23760725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 20499118 - 20499048
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctga 75  Q
    ||||||| |||||||||||||||||||| ||||||| |||||| |||  | |||| |||||||||||||||    
T  20499118 ttagatgattttgagtgcctgaacatgtataataatgattaggtaagtttttagattgagattgaacctga 20499048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 17266579 - 17266647
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacct 73  Q
    ||||||||||||||||||||||| |||| ||||||| |||||| |||  | |||| |||||||||||||    
T  17266579 ttagatgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacct 17266647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 19801088 - 19801159
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||  | ||||||||||||||||| ||||||| ||||||||||| |  ||||| ||||||||||||    
T  19801088 ccttagatgcatatgagtgcctgaacatgtctaataatgattaggaaagactagagaataagattgaacctg 19801159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 37116882 - 37116812
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctga 75  Q
    ||||||| ||||||||||||||| |||| ||||||| |||||| |||  | |||| |||||||||||||||    
T  37116882 ttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctga 37116812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 205
Target Start/End: Complemental strand, 21674013 - 21673940
Alignment:
Q  133 tgttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggtta 205  Q
    |||||||||||||||| |||||| ||||||||||||||||||    |||| ||||||||| || ||||||||||    
T  21674013 tgttacagaatgccttgtttaggataaatgcgatctttgtcgcacaagttaatgtgagttgatattagaggtta 21673940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 23760507 - 23760572
Alignment:
Q  9 atgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||| ||||||||||| ||||||| ||||||||| | || | | ||||||||||||||    
T  23760507 atgtttttgagttcctgaacatgtctaataatgattaggaaatattggatattgagattgaacctg 23760572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 982989 - 983059
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctga 75  Q
    ||||||| ||||||||| |||||||||| || || | ||||||||||  | |||| |||||||||||||||    
T  982989 ttagatgattttgagtgtctgaacatgtatattagtgattaggaaagtttttagattgagattgaacctga 983059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 13507668 - 13507713
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattag 46  Q
    ||||||||||| ||||||||||||||| |||| ||||||| |||||    
T  13507668 aaccttagatgattttgagtgcctgaatatgtataataatgattag 13507713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 13597200 - 13597245
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattag 46  Q
    ||||||||||| ||||||||||||||| |||| ||||||| |||||    
T  13597200 aaccttagatgattttgagtgcctgaatatgtataataatgattag 13597245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 19899554 - 19899481
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||||||||||||||| || ||||||| |||| ||||    | ||  |||||||||||||||||||    
T  19899554 aaccttagatgtttttgagtgcctaaagatgtttattaatgattaaatgataacttagaatgagattgaacctg 19899481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 24353550 - 24353489
Alignment:
Q  13 ttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||||||| |||| ||||||| |||||| |||  | |||| ||||||||||||||    
T  24353550 ttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctg 24353489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 19976904 - 19976860
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataatta 45  Q
    |||||||||||||||||||||||| || ||||||| |||| ||||    
T  19976904 aaccttagatgtttttgagtgcctaaagatgtttattaatgatta 19976860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 19983552 - 19983508
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataatta 45  Q
    |||||||||||||||||||||||| || ||||||| |||| ||||    
T  19983552 aaccttagatgtttttgagtgcctaaagatgtttattaatgatta 19983508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 40492438 - 40492506
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacct 73  Q
    ||||||| ||||||||||||||| |||| ||| ||| |||||| |||  | |||| |||||||||||||    
T  40492438 ttagatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagattgagattgaacct 40492506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 127; Significance: 9e-66; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 16597107 - 16596881
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 100  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16597107 aaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagacttagaatgaaaatttagag 16597008  T
Q  101 aatctgaccgaactcgccatggcga---------------------gcgtttgtgttacagaatgcctttttaggttaaatgcgatctttgtcgtttgag 179  Q
    |||||||||||||||||||||||||                     ||||||||||||||||||||||||||||||| |||| ||||||||||||| |||    
T  16597007 aatctgaccgaactcgccatggcgagtagaggttctcgccccgcgggcgtttgtgttacagaatgcctttttaggttgaatgtgatctttgtcgttcgag 16596908  T
Q  180 ttgatgtgagtttatcttagaggttag 206  Q
    |||||||||||| ||||||||||||||    
T  16596907 ttgatgtgagttgatcttagaggttag 16596881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 15552275 - 15552049
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 100  Q
    ||||||| ||| |||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||| ||||| ||||||||||||| ||||||| |||    
T  15552275 aaccttatatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagacttagaatcaaaatttggag 15552176  T
Q  101 aatctgaccgaactcgccatggcgag---------------------cgtttgtgttacagaatgcctttttaggttaaatgcgatctttgtcgtttgag 179  Q
    ||||||||||||||||||| ||||||                     | || |||||||| |||| |||||||||| ||||||||||||||||||| |||    
T  15552175 aatctgaccgaactcgccacggcgagcagaggctcgcgcctcgcgagcattggtgttacaaaatgtctttttaggtaaaatgcgatctttgtcgttcgag 15552076  T
Q  180 ttgatgtgagtttatcttagaggttag 206  Q
    |||||||||||| ||||||||||||||    
T  15552075 ttgatgtgagttgatcttagaggttag 15552049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 24029203 - 24029077
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 100  Q
    |||||||||||| ||||||||||||||||||| ||||| | |||| |||||||||||| ||||||||||||||| ||||||||||||||||| ||| |||    
T  24029203 aaccttagatgtctttgagtgcctgaacatgtctaatattgattatgaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggag 24029104  T
Q  101 aatctgaccgaactcgccatggcgagc 127  Q
    |||||||| ||||||||||||||||||    
T  24029103 aatctgactgaactcgccatggcgagc 24029077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 13812468 - 13812594
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 100  Q
    |||||||||||  |||||||| |||||||||| ||||| | ||||||||| ||||||| ||||||||||||||| ||||||||||||||||| ||| |||    
T  13812468 aaccttagatgcctttgagtgtctgaacatgtctaatattgattaggaaataatgtaggatgagattgaacctggaaagacttagaatgaaactttggag 13812567  T
Q  101 aatctgaccgaactcgccatggcgagc 127  Q
    ||||||||  |||||||||||||||||    
T  13812568 aatctgactaaactcgccatggcgagc 13812594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 44928584 - 44928709
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga-cttagaatgaaaatttagaga 101  Q
    ||||| |||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||| |||||  ||||||||||| ||| | ||    
T  44928584 ccttatatgtttttgagtgcctgaacatatctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaacttt-ggga 44928682  T
Q  102 atctgacc-gaactcgccatggcgagc 127  Q
    |||||||| ||||||||||||||||||    
T  44928683 atctgaccagaactcgccatggcgagc 44928709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 3 - 124
Target Start/End: Original strand, 20156951 - 20157072
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaa 102  Q
    |||||||||  ||||||||||||||||||| ||||| | ||||||||||||||||| ||||||||||||||| |||| |||||||||||| |||  ||||    
T  20156951 ccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaaggcttagaatgaaactttgaagaa 20157050  T
Q  103 tctgaccgaactcgccatggcg 124  Q
    | |||| |||||||||||||||    
T  20157051 tatgactgaactcgccatggcg 20157072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 22633886 - 22633998
Alignment:
Q  15 ttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaatctgaccgaact 114  Q
    |||||||||||||||||| ||||| | ||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||| || |||| ||  |||||    
T  22633886 ttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggataatcagattgaact 22633985  T
Q  115 cgccatggcgagc 127  Q
    |||||||||||||    
T  22633986 cgccatggcgagc 22633998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 14039109 - 14038983
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga-cttagaatgaaaatttagaga 101  Q
    ||||||||| |||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||  |||||  ||||||||||| ||| |  |    
T  14039109 ccttagatgcttttgagtgcctgaacatgtctaataatgatttggaaagaatgtagaatgagattgaacctagaaagattttagaatgaaacttttggaa 14039010  T
Q  102 atctgacc-gaactcgccatggcgagc 127  Q
    |||||||| |||||||||| |||||||    
T  14039009 atctgaccagaactcgccacggcgagc 14038983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 16239653 - 16239743
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaag-aatgtagaatgagattgaacctgaaaagacttagaatgaaa 92  Q
    ||||||||| |||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||| ||||| |||||||||||    
T  16239653 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaatgtagaatgagattgaacctggaaagatttagaatgaaa 16239743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 6190893 - 6190803
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaa 92  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||| ||||| | ||||||||||    
T  6190893 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctggaaagattgtagaatgaaa 6190803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 3097094 - 3097021
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||    
T  3097094 aaccttagatgttttcgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 3097021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 44102669 - 44102545
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga-cttagaatgaaaatttagaga 101  Q
    ||||||||| |||||||||||||| ||||||||||||| |||| | |||||||||| ||||||||||||||| | |||  ||||||| |||| || ||||    
T  44102669 ccttagatgcttttgagtgcctgagcatgtttaataatgattatg-aagaatgtaggatgagattgaacctggatagattttagaat-aaaactttgaga 44102572  T
Q  102 atctgacc-gaactcgccatggcgagc 127  Q
    |||||||| ||||||||||||||||||    
T  44102571 atctgacctgaactcgccatggcgagc 44102545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 12774458 - 12774369
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagac-ttagaatgaa 91  Q
    |||||||||||||||||||||||||||||| ||||||| ||||| ||||| || |||||||||||||||||| | |||| ||||||||||    
T  12774458 ccttagatgtttttgagtgcctgaacatgtctaataatgattagaaaagattggagaatgagattgaacctggagagacgttagaatgaa 12774369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 8846834 - 8846758
Alignment:
Q  4 cttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga 80  Q
    ||||||||||||||||| ||||||||||| ||||||| ||||||||||| || |||||||||||||||||| |||||    
T  8846834 cttagatgtttttgagtacctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaaga 8846758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 15091355 - 15091231
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga-cttagaatgaaaatttagagaat 103  Q
    ||||||| ||||||||  |||||||||| ||||| | ||||||||||||||||||||||||||||||||| || ||  ||||||||||| ||| |  |||    
T  15091355 ttagatgcttttgagtttctgaacatgtctaatattgattaggaaagaatgtagaatgagattgaacctggaaggattttagaatgaaacttttggaaat 15091256  T
Q  104 ctgacc-gaactcgccatggcgagc 127  Q
    |||||| |||||||||| |||||||    
T  15091255 ctgacctgaactcgccacggcgagc 15091231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 61 - 127
Target Start/End: Complemental strand, 3332287 - 3332221
Alignment:
Q  61 tgagattgaacctgaaaagacttagaatgaaaatttagagaatctgaccgaactcgccatggcgagc 127  Q
    |||||||||||||| ||||||||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  3332287 tgagattgaacctggaaagacttagaatgaaactttggagaatctgactgaactcgccatggcgagc 3332221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 14052972 - 14053042
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaac 71  Q
    ||||||||||| ||||||||||||||| |||| ||||||| ||||||||||||||||| ||||||||||||    
T  14052972 aaccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtaggatgagattgaac 14053042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 43198247 - 43198317
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaac 71  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||| | |||| |||||||||||    
T  43198247 aaccttagatgtttttgagtgcctgaacatgtgtaataatgattaggaaagattttagattgagattgaac 43198317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 44053289 - 44053163
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaaatttagaga 101  Q
    ||||||||| ||||||||| |||||||||| ||||||| ||| ||||||||||||| ||||||||||||||| ||||| | ||| |||||| ||  | ||    
T  44053289 ccttagatgcttttgagtgtctgaacatgtctaataatgattgggaaagaatgtaggatgagattgaacctgtaaagattataggatgaaacttgtggga 44053190  T
Q  102 atctgacc-gaactcgccatggcgagc 127  Q
     ||||||| |||||||||| |||||||    
T  44053189 ttctgacctgaactcgccacggcgagc 44053163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 7089328 - 7089255
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||  | ||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||    
T  7089328 aaccttagatgcctatgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 7089255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 12903207 - 12903135
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| ||| |||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||    
T  12903207 aaccttagatgcttt-gagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 12903135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 39705947 - 39706020
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||| || ||| | ||||||||||||    
T  39705947 aaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattgaagattaagattgaacctg 39706020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 21814964 - 21815035
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||| ||||||||| |||||||||||||||||| ||||||||||||| |||||||| | ||||||||    
T  21814964 ccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaagaatttagaatgataatgaacctg 21815035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 21818386 - 21818457
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||| ||||||||| |||||||||||||||||| ||||||||||||| |||||||| | ||||||||    
T  21818386 ccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaagaatttagaatgataatgaacctg 21818457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 22636894 - 22636823
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||| ||||||||| ||||| |||| ||||||| ||||||||||||||||| |||||||||||||||    
T  22636894 ccttagatgcttttgagtgtctgaagatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 22636823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 16377183 - 16377308
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga-cttagaatgaaaatttagaga 101  Q
    ||||||||| ||||||| | |||||||||| ||||||| ||||||||| ||||||| ||||||||||||||| || || | ||||||| || ||| | ||    
T  16377183 ccttagatgcttttgagcgtctgaacatgtctaataatgattaggaaataatgtaggatgagattgaacctggaatgatcgtagaatg-aacttttggga 16377281  T
Q  102 atctgacc-gaactcgccatggcgagc 127  Q
    |||||||| |||||||||| |||||||    
T  16377282 atctgacctgaactcgccacggcgagc 16377308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 17047743 - 17047813
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaac 71  Q
    |||||||||||| ||||||||||||||||||  ||||||| ||||||||| ||||||| ||||||||||||    
T  17047743 aaccttagatgtctttgagtgcctgaacatgactaataatgattaggaaaaaatgtaggatgagattgaac 17047813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 206
Target Start/End: Complemental strand, 12774310 - 12774233
Alignment:
Q  130 ttgtgttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    |||||||||||| |||||| |||||||||||||||||| ||||||   ||||||||||||||| ||||||||||||||    
T  12774310 ttgtgttacagactgccttgtttaggttaaatgcgatccttgtcgcacgagttgatgtgagttgatcttagaggttag 12774233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 15099812 - 15099739
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||||||||||||||||||| ||| | || || ||||||||||| |||||| ||||||||||||||    
T  15099812 aaccttagatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacctg 15099739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 7799157 - 7799081
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaag 79  Q
    ||||||||| |||||||||||||||||||  ||||||| ||||||| | ||||||| ||||||||||||||| ||||    
T  7799157 ccttagatgcttttgagtgcctgaacatgactaataatgattaggacataatgtaggatgagattgaacctggaaag 7799081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 15464592 - 15464664
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaa 77  Q
    ||||||| ||||||||||||||| |||| ||||||| ||||||||||| | |||| |||||||||||||||||    
T  15464592 ttagatgattttgagtgcctgaatatgtataataatgattaggaaagattttagattgagattgaacctgaaa 15464664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 21815293 - 21815364
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||| ||||||||| |||||||||||||||||| ||||||||| ||| |||||||| | ||||||||    
T  21815293 ccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaataatttagaatgataatgaacctg 21815364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 15099657 - 15099584
Alignment:
Q  134 gttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||| ||| ||||||||||| |||||||||||||  |||||||||||||||| ||||| ||||||||    
T  15099657 gttacagaatgtcttgtttaggttaaaagcgatctttgtcgcatgagttgatgtgagttgatcttggaggttag 15099584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 15868294 - 15868367
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| ||||||||||||||| |||| ||||||| ||||||||||  | |||| ||||||||||||||    
T  15868294 aaccttagatgattttgagtgcctgaatatgtataataatgattaggaaagtttttagattgagattgaacctg 15868367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 52242856 - 52242925
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||| ||| |||||||||||||||| ||||||| || |||||||| | |||||||||||||||||||    
T  52242856 ttagatgatttcgagtgcctgaacatgtataataatgatcaggaaagattctagaatgagattgaacctg 52242925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 15190624 - 15190551
Alignment:
Q  134 gttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||||||| ||||||||||| |||||||||||||   ||||||||||||||| ||||| | ||||||    
T  15190624 gttacagaatgccttgtttaggttaaaagcgatctttgtcgcacgagttgatgtgagttgatcttgggggttag 15190551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 15190779 - 15190706
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||||||||||||||||||||||| |||| || ||||| ||||  | |||| ||||||| ||||||    
T  15190779 aaccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaaggttctagattgagatttaacctg 15190706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 39706101 - 39706174
Alignment:
Q  134 gttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    |||||||||||| || |||||||||||||||||||||||||   ||||||||||||||| ||||| ||| ||||    
T  39706101 gttacagaatgctttgtttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcttggagattag 39706174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 17046765 - 17046721
Alignment:
Q  14 tttgagtgcctgaacatgtttaataataattaggaaagaatgtag 58  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||    
T  17046765 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtag 17046721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 173
Target Start/End: Original strand, 22634022 - 22634066
Alignment:
Q  130 ttgtgttacagaatgcctt-tttaggttaaatgcgatctttgtcg 173  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  22634022 ttgtgttacagaatgccttgtttaggttaaatgcgatctttgtcg 22634066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 13436 - 13505
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||| ||||||||||||||||| || ||||||| |||||| |||  | |||| ||||||||||||||    
T  13436 ttagatgattttgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacctg 13505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 8846681 - 8846608
Alignment:
Q  134 gttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||| ||| |||| ||||||||||||||||||||   ||||||||||||||| | ||||||| ||||    
T  8846681 gttacagaatgtcttgtttatgttaaatgcgatctttgtcgcacgagttgatgtgagttgaacttagagattag 8846608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 12287792 - 12287865
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||||| | |||| |||||||||| ||||||| |||||| |||  | |||| ||||||||||||||    
T  12287792 aaccttagatgtttctaagtgtctgaacatgtataataatgattaggcaagtttttagattgagattgaacctg 12287865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 182
Target Start/End: Complemental strand, 3332192 - 3332144
Alignment:
Q  135 ttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttg 182  Q
    |||||||||||||| |||||||||||||||||||||||||  |||||||    
T  3332192 ttacagaatgccttgtttaggttaaatgcgatctttgtcgcatgagttg 3332144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 13845001 - 13844950
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaaga 52  Q
    ||||||||||||||||||||| |||||||||| |||| || ||||| |||||    
T  13845001 aaccttagatgtttttgagtgtctgaacatgtctaattatgattagaaaaga 13844950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 173
Target Start/End: Complemental strand, 24029048 - 24029009
Alignment:
Q  135 ttacagaatgcctt-tttaggttaaatgcgatctttgtcg 173  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  24029048 ttacagaatgccttgtttaggttaaatgcgatctttgtcg 24029009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 32851913 - 32851868
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattag 46  Q
    ||||||||||| ||||||||||||||| |||| ||||||| |||||    
T  32851913 aaccttagatgattttgagtgcctgaatatgtataataatgattag 32851868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 44676091 - 44676018
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||||||||||||||| || ||||||| |||| ||||    | ||  |||||||||||||||||||    
T  44676091 aaccttagatgtttttgagtgcctaaagatgtttattaatgattaaatgataacttagaatgagattgaacctg 44676018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 123; Significance: 2e-63; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 28939 - 29165
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 100  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  28939 aaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctagaaagacttagaatgaaaatttagag 29038  T
Q  101 aatctgaccgaactcgccatggc---------------------gagcgtttgtgttacagaatgcctttttaggttaaatgcgatctttgtcgtttgag 179  Q
    |||||||||||||| ||||||||                     ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  29039 aatctgaccgaactagccatggcgagcagaggctctcgcctcgtgagcgtttgtgttacagaatgcctttttaggttgaatgcgatctttgtcgttcgag 29138  T
Q  180 ttgatgtgagtttatcttagaggttag 206  Q
    |||||||||||| ||||||||||||||    
T  29139 ttgatgtgagttgatcttagaggttag 29165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 134 - 203
Target Start/End: Original strand, 7889 - 7958
Alignment:
Q  134 gttacagaatgcctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggt 203  Q
    |||||| |||||||| ||||| ||||||||||||||||||   ||||||||||||||| |||||||||||    
T  7889 gttacaaaatgccttgttagggtaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggt 7958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 2104 - 2330
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 100  Q
    ||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2104 aaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 2203  T
Q  101 aatctgaccgaactcgccatg---------------------gcgagcgtttgtgttacagaatgcctttttaggttaaatgcgatctttgtcgtttgag 179  Q
    |||||||||||||||||||||                     |||||||| |||||||||||||||||||||||||| ||||||||||||| |||| |||    
T  2204 aatctgaccgaactcgccatggcgagcagaggctctcgcctcgcgagcgtgtgtgttacagaatgcctttttaggttgaatgcgatctttgccgttcgag 2303  T
Q  180 ttgatgtgagtttatcttagaggttag 206  Q
    || ||||||||| ||||||||||||||    
T  2304 tttatgtgagttgatcttagaggttag 2330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 2e-60; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 23071622 - 23071843
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 100  Q
    ||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23071622 aaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 23071721  T
Q  101 aatctgaccgaactcgccatg---------------------gcgagcgtttgtgttacagaatgcctttttaggttaaatgcgatctttgtcgtttgag 179  Q
    |||||||||||||||||||||                     |||||||||||||||||| |||||||||||||||| |||| ||||||| ||||| |||    
T  23071722 aatctgaccgaactcgccatggcgagcagaggctctcgcctcgcgagcgtttgtgttacaaaatgcctttttaggttgaatgagatctttttcgttcgag 23071821  T
Q  180 ttgatgtgagtttatcttagag 201  Q
    |||||||||||| |||||||||    
T  23071822 ttgatgtgagttgatcttagag 23071843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 23660482 - 23660357
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga-cttagaatgaaaatttagaga 101  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||  ||||||||||| ||| | ||    
T  23660482 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaacttttg-ga 23660384  T
Q  102 atctgacc-gaactcgccatggcgagc 127  Q
    |||||||| |||||||||| |||||||    
T  23660383 atctgacctgaactcgccacggcgagc 23660357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 23076900 - 23076777
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaa 102  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||| ||||| ||||||||||| ||| || |     
T  23076900 ccttagatgcttttgagtgcctgaacatgtctaataataattaggaaagaatgtaggatgagattggacctggaaagatttagaatgaaactttgga-at 23076802  T
Q  103 tctgacc-gaactcgccatggcgag 126  Q
    ||||||| |||||||||| ||||||    
T  23076801 tctgacctgaactcgccacggcgag 23076777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 298476 - 298600
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaa 102  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||||| ||| ||||||||||||||| ||||| ||||||||||| ||  | ||     
T  298476 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatataggatgagattgaacctggaaagatttagaatgaaacttgtgggat 298575  T
Q  103 tctgacc-gaactcgccatggcgag 126  Q
    ||||||| |||||||||| ||||||    
T  298576 tctgacctgaactcgccacggcgag 298600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 22730894 - 22730984
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaa 92  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| ||||| | ||||||||||    
T  22730894 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaa 22730984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 27754035 - 27753909
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaaatttagaga 101  Q
    ||||||||| |||||||||||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| ||||| | |||||||||| ||  | ||    
T  27754035 ccttagatgcttttgagtgcctcaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggga 27753936  T
Q  102 atctgacc-gaactcgccatggcgagc 127  Q
     ||||||| |||||||||| |||||||    
T  27753935 ttctgacctgaactcgccacggcgagc 27753909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 32451590 - 32451716
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaaatttagaga 101  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||| || ||||| | |||||||||| ||  | ||    
T  32451590 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacatggaaagattgtagaatgaaacttgtggga 32451689  T
Q  102 atctgacc-gaactcgccatggcgagc 127  Q
     ||||||| |||||||||| |||||||    
T  32451690 ttctgacctgaactcgccacggcgagc 32451716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 22337575 - 22337486
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaa 92  Q
    ||||||||| |||||||||  ||||||||| ||||||| ||||||||||||||||| ||||||||||||||| ||||| |||||||||||    
T  22337575 ccttagatgcttttgagtgtatgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagatttagaatgaaa 22337486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 28406436 - 28406362
Alignment:
Q  6 tagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga 80  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||| |||||    
T  28406436 tagatgcttttgagtgcctgaacatgtctaataataattaggaaagattggagaatgagattgaacctgtaaaga 28406362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 23654069 - 23654142
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| |||||| ||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||    
T  23654069 aaccttagatgcttttgactgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 23654142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 22133878 - 22133948
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacct 73  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||| || |||||||||||||||||    
T  22133878 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacct 22133948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 22737841 - 22737911
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacct 73  Q
    ||||||||| |||||||||||||||||| | ||||||| ||||||||||||||||| ||||||||||||||    
T  22737841 ccttagatgcttttgagtgcctgaacatatctaataatgattaggaaagaatgtaggatgagattgaacct 22737911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 23286312 - 23286242
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaac 71  Q
    ||||||||||| ||||||||| |||||||||| ||||||| ||||||||||||||||| ||||||||||||    
T  23286312 aaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaac 23286242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 28291961 - 28292027
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagatt 67  Q
    ||||||||||| |||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||    
T  28291961 aaccttagatgcttttgagtgcctgaacatgtctaagaatgattaggaaagaatgtagaatgagatt 28292027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 37786 - 37859
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| |||||||||||||||||||| ||||||| |||||||||  |||||| |||||||||||||||    
T  37786 aaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaagatgtaggatgagattgaacctg 37859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 130 - 206
Target Start/End: Original strand, 22134025 - 22134102
Alignment:
Q  130 ttgtgttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    |||||||||||| |||||| |||||||||||||||||||||||||   ||||||||||||||| ||||||||||||||    
T  22134025 ttgtgttacagactgccttgtttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggttag 22134102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 20309556 - 20309483
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||| ||| ||||||||||||| | |||| ||||||| ||||||||||||||||| |||||||||||||||    
T  20309556 aaccttatatgcttttgagtgcctggatatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 20309483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 25176304 - 25176231
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||||||||||||||||||||||| |||| || ||||||||||  || ||| ||||||||||||||    
T  25176304 aaccttagatgtttttgagtgcctgaacatgtctaattatgattaggaaaggttggagattgagattgaacctg 25176231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 206
Target Start/End: Complemental strand, 28406290 - 28406213
Alignment:
Q  130 ttgtgttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    |||||||||| |||||||| |||||||||||||||||| ||||||   ||||||||||||||| ||||||||||||||    
T  28406290 ttgtgttacataatgccttgtttaggttaaatgcgatccttgtcgcacgagttgatgtgagttgatcttagaggttag 28406213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 137 - 203
Target Start/End: Original strand, 22459377 - 22459443
Alignment:
Q  137 acagaatgcctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggt 203  Q
    |||||||||||| |||||||||||| || ||||||| |  ||||||||||||||| | |||||||||    
T  22459377 acagaatgccttgttaggttaaatgtgacctttgtcctacgagttgatgtgagttgaccttagaggt 22459443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 23207812 - 23207744
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacct 73  Q
    ||||||| || ||||||||||||||||| ||||||| |||||| |||  | |||| |||||||||||||    
T  23207812 ttagatgattatgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacct 23207744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 23005263 - 23005197
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaac 71  Q
    |||||||||||||||||||||||||||| ||| ||| |||||| |||  | | || |||||||||||    
T  23005263 ttagatgtttttgagtgcctgaacatgtataagaatgattaggcaagttttttgattgagattgaac 23005197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 39827602 - 39827648
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaag 51  Q
    ||||||| ||||||||||||||| |||| ||||||| ||||||||||    
T  39827602 ttagatgattttgagtgcctgaatatgtataataatgattaggaaag 39827648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 22412722 - 22412791
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||| || ||||||||||||||||| | ||||| |||||| |||  | |||| ||||||||||||||    
T  22412722 ttagatgattctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctg 22412791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 23708282 - 23708347
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaa 70  Q
    ||||||||||||||||| |||||||| | || |||| ||||||||||   ||||| ||||||||||    
T  23708282 ttagatgtttttgagtgtctgaacatatgtattaatgattaggaaagttcgtagattgagattgaa 23708347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 113; Significance: 2e-57; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 3 - 206
Target Start/End: Complemental strand, 16118 - 15894
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaa 102  Q
    ||||||||| ||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  16118 ccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagactcaaaatgaaaatttagagaa 16019  T
Q  103 tctgaccgaactcgccatggc---------------------gagcgtttgtgttacagaatgcctttttaggttaaatgcgatctttgtcgtttgagtt 181  Q
    |||||||||||||||||||||                     |||| |||||||||||||||||||||||||||  |||||||||||||||||| |||||    
T  16018 tctgaccgaactcgccatggcgagcagaggctctcgcctcgcgagcttttgtgttacagaatgcctttttaggtggaatgcgatctttgtcgttcgagtt 15919  T
Q  182 gatgtgagtttatcttagaggttag 206  Q
    |||||||||| ||||||||||||||    
T  15918 gatgtgagttgatcttagaggttag 15894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 1799 - 1765
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgttta 35  Q
    ||||||||||||||||||||||||||| |||||||    
T  1799 aaccttagatgtttttgagtgcctgaagatgttta 1765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 111; Significance: 3e-56; HSPs: 3)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 34582 - 34456
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 100  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  34582 aaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttggag 34483  T
Q  101 aatctgaccgaactcgccatggcgagc 127  Q
    |||||||||||||||||||||||||||    
T  34482 aatctgaccgaactcgccatggcgagc 34456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 13552 - 13426
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaaatttagaga 101  Q
    ||||||||| |||||||||||||||||||| |||| || ||||||||||||||||| ||||||||||| ||||||||| | |||||||||| ||  | ||    
T  13552 ccttagatgcttttgagtgcctgaacatgtctaattatgattaggaaagaatgtaggatgagattgaatctgaaaagattgtagaatgaaacttgtggga 13453  T
Q  102 atctgacc-gaactcgccatggcgagc 127  Q
     ||||||| |||||||||| |||||||    
T  13452 ttctgacctgaactcgccacggcgagc 13426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 129 - 206
Target Start/End: Complemental strand, 34433 - 34356
Alignment:
Q  129 tttgtgttacagaatgcctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||| ||| |||||||||||| |||||||||||||| |||  |||||||||||||| ||||||||||||||    
T  34433 tttgtgttacataattcctttttaggttgaatgcgatctttgttgttctagttgatgtgagttgatcttagaggttag 34356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 1e-49; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 19660496 - 19660723
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaa-tttaga 99  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||||||| ||| ||    
T  19660496 aaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtggaatgagattaaacctggaaagacttagaatgaaaactttgga 19660595  T
Q  100 gaatctgaccgaactcgccatg---------------------gcgagcgtttgtgttacagaatgcctttttaggttaaatgcgatctttgtcgtttga 178  Q
    |||||| |||||||||||||||                     ||||||||||||||||||||| ||||||||||||| ||||| |||||||||||| ||    
T  19660596 gaatctaaccgaactcgccatggcgagcagaggctctcgcctcgcgagcgtttgtgttacagaacgcctttttaggttgaatgcaatctttgtcgttcga 19660695  T
Q  179 gttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||||| ||||||||||||||    
T  19660696 gttgatgtgagttgatcttagaggttag 19660723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 22119852 - 22119978
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 100  Q
    |||||||||||  ||||||||||||||||||| ||||| | ||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||| |||    
T  22119852 aaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggag 22119951  T
Q  101 aatctgaccgaactcgccatggcgagc 127  Q
    |||||||| ||||||||||||||||||    
T  22119952 aatctgactgaactcgccatggcgagc 22119978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 24766996 - 24767122
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 100  Q
    |||||||||||  ||||||||||||||||||| ||||| | |||| |||||||||||| ||||||||||| ||| ||||||||||||||||| ||| |||    
T  24766996 aaccttagatgcctttgagtgcctgaacatgtctaatattgattacgaaagaatgtaggatgagattgaatctggaaagacttagaatgaaactttggag 24767095  T
Q  101 aatctgaccgaactcgccatggcgagc 127  Q
    |||||||| ||||||| ||||||||||    
T  24767096 aatctgactgaactcgtcatggcgagc 24767122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 11580906 - 11581031
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga-cttagaatgaaaatttagaga 101  Q
    ||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||  ||||||| |||| || ||||    
T  11580906 ccttagaagcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggatagattttagaat-aaaactttgaga 11581004  T
Q  102 atctgacc-gaactcgccatggcgagc 127  Q
    |||||||| ||||||||||||||||||    
T  11581005 atctgacctgaactcgccatggcgagc 11581031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 21985808 - 21985897
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaa 92  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  21985808 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagatttagaatgaaa 21985897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 23390157 - 23390282
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaaatttagaga 101  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| ||||| | |||||||||| ||  | ||    
T  23390157 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggga 23390256  T
Q  102 atctgacc-gaactcgccatggcgag 126  Q
     ||||||| |||||||||||||||||    
T  23390257 ttctgacctgaactcgccatggcgag 23390282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 21292640 - 21292713
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  21292640 aaccttagatgcttttgagtgcctgaacatgtctaataataattaggaaagaatgtaggatgagattgaacctg 21292713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 36154489 - 36154613
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga-cttagaatgaaaatttagaga 101  Q
    ||||||||| |||||||||| ||||||||| ||||||| |||||||||||||||||| |||||||||||||| | |||  ||||||| |||| || ||||    
T  36154489 ccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagagtgagattgaacctggatagattttagaat-aaaactttgaga 36154587  T
Q  102 atctgacc-gaactcgccatggcgag 126  Q
    |||||||| |||||||||||||||||    
T  36154588 atctgacctgaactcgccatggcgag 36154613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 25431854 - 25431730
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaa 102  Q
    ||||||||| ||||||||||||||||||||||| |||| ||||||||||||| ||| ||||||||| ||||| ||||| ||||||||||| ||| |  ||    
T  25431854 ccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagaatttaggatgagattggacctggaaagatttagaatgaaacttttggaaa 25431755  T
Q  103 tctgac-cgaactcgccatggcgag 126  Q
    ||||||  |||||||||| ||||||    
T  25431754 tctgacttgaactcgccacggcgag 25431730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 9078402 - 9078323
Alignment:
Q  13 ttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaa 92  Q
    |||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||    
T  9078402 ttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtagaatgagattgaacctggaaagatttagaatgaaa 9078323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 21566004 - 21565927
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga 80  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||| || |||||||||||||||||| |||||    
T  21566004 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaaga 21565927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 22959194 - 22959283
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagac-ttagaatgaa 91  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||| || |||||||||||||||||| | |||| ||||||||||    
T  22959194 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagactttagaatgaa 22959283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 24494028 - 24493903
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaa 102  Q
    ||||| ||| ||||||  |||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| ||||| ||||||||||| |||   ||     
T  24494028 ccttaaatgcttttgaacgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagatttagaatgaaactttttggat 24493929  T
Q  103 tctgacc-gaactcgccatggcgagc 127  Q
    ||||||| |||||||||| |||||||    
T  24493928 tctgacctgaactcgccacggcgagc 24493903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 1096929 - 1096850
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga 80  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||| ||| |||||    
T  1096929 aaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaatctggaaaga 1096850  T

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Target: chr5; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 21871230 - 21871309
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga 80  Q
    ||||||||||| ||||||||||||||||||||||| |||| ||||||||||| ||||| ||||||||||||||| |||||    
T  21871230 aaccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagagtgtaggatgagattgaacctggaaaga 21871309  T

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Target: chr5; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 21875510 - 21875589
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga 80  Q
    ||||||||||| ||||||||||||||||||||||| |||| ||||||||||| ||||| ||||||||||||||| |||||    
T  21875510 aaccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagagtgtaggatgagattgaacctggaaaga 21875589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 13095954 - 13095865
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaa 92  Q
    ||||||||| ||||||  |||||||||||| ||||||| ||||||||||||||||| ||||||||| ||||| ||||| |||||||||||    
T  13095954 ccttagatgcttttgaaagcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagatttagaatgaaa 13095865  T

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Target: chr5; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 24529681 - 24529605
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaag 79  Q
    ||||||||| |||| ||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| ||||    
T  24529681 ccttagatgcttttcagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaag 24529605  T

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Target: chr5; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 25421992 - 25421868
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaa 102  Q
    ||||||||| |||||||||||||||||||| || |||| ||||||||||||  ||| ||||||||| ||||| ||||| ||||||||||| ||| |  ||    
T  25421992 ccttagatgcttttgagtgcctgaacatgtctattaatgattaggaaagaacttaggatgagattggacctggaaagatttagaatgaaactttcggaaa 25421893  T
Q  103 tctgac-cgaactcgccatggcgag 126  Q
    ||||||  |||||||||| ||||||    
T  25421892 tctgacttgaactcgccacggcgag 25421868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 13025770 - 13025681
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaa 92  Q
    ||||||||  ||||||  |||||||||||| ||||||| ||||||||||||||||| ||||||||| ||||| ||||| |||||||||||    
T  13025770 ccttagatacttttgaaagcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagatttagaatgaaa 13025681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 19669360 - 19669271
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagac-ttagaatgaa 91  Q
    ||||||||||||||||||| |||||||||| ||||||| ||||||||||| ||  |||||||||||||| || |||||| ||||||||||    
T  19669360 ccttagatgtttttgagtgtctgaacatgtctaataatgattaggaaagattggggaatgagattgaacgtggaaagactttagaatgaa 19669271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 21498676 - 21498749
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||| ||||||||||||||||||||||||| ||||||| ||||||| ||| |||||| ||||||||||||||    
T  21498676 aaccttggatgtttttgagtgcctgaacatgtataataattattaggagagattgtagattgagattgaacctg 21498749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 134 - 203
Target Start/End: Original strand, 21329309 - 21329379
Alignment:
Q  134 gttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggt 203  Q
    ||||||||||||||| |||||||||||||||||||||||||   ||||||||||||||| |||||||||||    
T  21329309 gttacagaatgccttgtttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggt 21329379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 8286512 - 8286585
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||  |||||||||| |||||||| ||||||| |||| |||||||||||| |||||||||||||||    
T  8286512 aaccttagatgcatttgagtgccggaacatgtctaataatgattaagaaagaatgtaggatgagattgaacctg 8286585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 22075470 - 22075397
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| |||||||||||||||||||| ||||||| |||||| |||||||||| |||| | ||||||||    
T  22075470 aaccttagatgcttttgagtgcctgaacatgtctaataatgattaggtaagaatgtaggatgaaaatgaacctg 22075397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 22107047 - 22107119
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaa 77  Q
    |||||||  ||||||||||||||||||| ||||| | ||||||||||||||||| | ||||||||||||||||    
T  22107047 ttagatgcgtttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggacgagattgaacctgaaa 22107119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 21329154 - 21329227
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||||||||||||||||||||||| || | || ||||| ||||| | |||| ||||||||||||||    
T  21329154 aaccttagatgtttttgagtgcctgaacatgtctagttatgattagaaaagattctagattgagattgaacctg 21329227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 22144508 - 22144439
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||| |||||||||||||||||||| ||| ||| ||||||||||| | |||| ||||||||||||||    
T  22144508 ttagatgattttgagtgcctgaacatgtgtaacaatgattaggaaagattctagattgagattgaacctg 22144439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 5888837 - 5888904
Alignment:
Q  4 cttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaac 71  Q
    ||||||||||||||||||||||||| ||| | || || ||||||||||| |||||| |||||||||||    
T  5888837 cttagatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaac 5888904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 21565851 - 21565778
Alignment:
Q  134 gttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||| ||| |||| || |||||||||||||||||   ||||||||||||||| ||||||||||||||    
T  21565851 gttacagaatgacttgtttatgtaaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggttag 21565778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 26011848 - 26011920
Alignment:
Q  134 gttacagaatgcctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    |||||||||||| || |||||||||||| ||||||||||    ||||||||||||||| ||||| ||||||||    
T  26011848 gttacagaatgctttgttaggttaaatgtgatctttgtcacacgagttgatgtgagttgatcttggaggttag 26011920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 20026526 - 20026592
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaac 71  Q
    ||||||| |||||||||||||||||||| ||||||| |||||| |||  | |||| |||||||||||    
T  20026526 ttagatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaac 20026592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 21741202 - 21741275
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||| ||||||||||||||||| ||| | || || | ||||||||| | |||| ||||||||||||||    
T  21741202 aaccttagatatttttgagtgcctgaacttgtatgatgatgaataggaaagattatagattgagattgaacctg 21741275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 21741373 - 21741430
Alignment:
Q  149 tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||| |||||||||||||   ||||||||||||||| ||||| ||||||||    
T  21741373 tttaggttaaaagcgatctttgtcgcacgagttgatgtgagttgatcttggaggttag 21741430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 173
Target Start/End: Original strand, 5888990 - 5889029
Alignment:
Q  135 ttacagaatgcctt-tttaggttaaatgcgatctttgtcg 173  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  5888990 ttacagaatgccttgtttaggttaaatgcgatctttgtcg 5889029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 173
Target Start/End: Original strand, 22120007 - 22120046
Alignment:
Q  135 ttacagaatgcctt-tttaggttaaatgcgatctttgtcg 173  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  22120007 ttacagaatgccttgtttaggttaaatgcgatctttgtcg 22120046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 22177802 - 22177876
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctga 75  Q
    |||| |||||| ||||||||||||||| |||| ||||||| |||||| |||  | |||| |||| ||||||||||    
T  22177802 aaccctagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagtttgaacctga 22177876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 19669206 - 19669133
Alignment:
Q  134 gttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||||||| |||||| |||||| |||  ||||||    |||||||||||||| ||||||||||||||    
T  19669206 gttacagaatgccttgtttaggataaatgtgattcttgtcgcacaagttgatgtgagttgatcttagaggttag 19669133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 206
Target Start/End: Original strand, 21501971 - 21502039
Alignment:
Q  138 cagaatgcctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||| || ||||||||||||| |||||||   |||||||||| |||| ||||| || |||||    
T  21501971 cagaatgccttgttgggttaaatgcgatatttgtcgcacgagttgatgttagttgatcttggaagttag 21502039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 3e-47; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 3 - 206
Target Start/End: Complemental strand, 20919061 - 20918837
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaa 102  Q
    ||||| ||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||    
T  20919061 ccttacatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatttaaatttggagaa 20918962  T
Q  103 tctgaccgaactcgccatggcgagc-------------------gtttgt--gttacagaatgcctttttaggttaaatgcgatctttgtcgtttgagtt 181  Q
    |||||| ||||||||||||||||||                   | ||||  |||| |||||||||||||||||| |||||||||||||||||| || ||    
T  20918961 tctgactgaactcgccatggcgagcagaggctctcgcctcgcgagcttgtgtgttaaagaatgcctttttaggttgaatgcgatctttgtcgttcgactt 20918862  T
Q  182 gatgtgagtttatcttagaggttag 206  Q
    |||||||||| ||||||||||||||    
T  20918861 gatgtgagttgatcttagaggttag 20918837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 20135647 - 20135522
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaa-atttagaga 101  Q
    ||||||||| |||||||||| ||||||||| ||||||| ||||||||||||||||| ||||||||| ||||| ||||||||||||||||| |||| |  |    
T  20135647 ccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagacttagaatgaaacattttggaa 20135548  T
Q  102 atctgaccgaactcgccatggcgagc 127  Q
     |||||||||||||||||||||||||    
T  20135547 ttctgaccgaactcgccatggcgagc 20135522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 433467 - 433342
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga-cttagaatgaaaatttagaga 101  Q
    ||||||||| ||||||||| |||||||||| || |||| ||||||||||||||||||||||||||||||||| |||||  ||||||||||| ||| | ||    
T  433467 ccttagatgcttttgagtgtctgaacatgtctattaatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaacttt-ggga 433369  T
Q  102 atctgacc-gaactcgccatggcgagc 127  Q
    |||||||| ||||||||||||||||||    
T  433368 atctgacctgaactcgccatggcgagc 433342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 14 - 127
Target Start/End: Original strand, 50209885 - 50209999
Alignment:
Q  14 tttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaatctgacc-gaa 112  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||| |  | ||||||| |||    
T  50209885 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagatttagaatgaaacttttggaattctgacctgaa 50209984  T
Q  113 ctcgccatggcgagc 127  Q
    ||||||| |||||||    
T  50209985 ctcgccacggcgagc 50209999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 4 - 127
Target Start/End: Complemental strand, 34510239 - 34510115
Alignment:
Q  4 cttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaaatttagagaa 102  Q
    |||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| ||||| | |||||||||  ||| || ||    
T  34510239 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaacttttgga-aa 34510141  T
Q  103 tctgacc-gaactcgccatggcgagc 127  Q
    ||||||| |||||||||| |||||||    
T  34510140 tctgacctgaactcgccacggcgagc 34510115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 22355844 - 22355917
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||    
T  22355844 aaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 22355917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 22357530 - 22357603
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||    
T  22357530 aaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 22357603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 22532729 - 22532658
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||    
T  22532729 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 22532658  T

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Target: chr1; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 21754495 - 21754406
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagac-ttagaatgaa 91  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||| || |||| |||||||||||||  ||||| ||||||||||    
T  21754495 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaaagagattgaacctgggaagactttagaatgaa 21754406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 27250399 - 27250472
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| ||| |||||||||||    
T  27250399 aaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgggattgaacctg 27250472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 52927642 - 52927719
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga 80  Q
    |||||||||||||||||||||||||||||| ||||||| |||| |||||| || |||||||||||||||||| |||||    
T  52927642 ccttagatgtttttgagtgcctgaacatgtctaataatgattatgaaagattggagaatgagattgaacctggaaaga 52927719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 52927795 - 52927867
Alignment:
Q  134 gttacagaatgcctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||||||| ||||||||||||||||||||||||   ||||||||||||||| ||||||||||||||    
T  52927795 gttacagaatgccttgttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggttag 52927867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 20846891 - 20846962
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||| |||||||||||||||||||| ||||||| |||||| |||||||||| |||||||||||||||    
T  20846891 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggtaagaatgtaggatgagattgaacctg 20846962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 22921526 - 22921597
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacc 72  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||| || ||| ||||||||||||    
T  22921526 aaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacc 22921597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 20248734 - 20248648
Alignment:
Q  6 tagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagac-ttagaatgaa 91  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||  | |||||||||||||||||| | |||| ||||||||||    
T  20248734 tagatgtttttgagtgcctgaacatgtctaataatgattaggaaagatcggagaatgagattgaacctggagagactttagaatgaa 20248648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 33681469 - 33681392
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga 80  Q
    |||||||||||||||||| |||||| |||| ||||||| ||||||||||| || |||||||||||||||||| |||||    
T  33681469 ccttagatgtttttgagttcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaaga 33681392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 38801065 - 38801134
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||| ||||||||||||||||||| ||||||| ||||||||||||||||| ||| |||||||||||    
T  38801065 ttagatgtctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgtgattgaacctg 38801134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 20091133 - 20091261
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaa-atttaga 99  Q
    |||||||||||  ||||| ||||||||||||| ||||| | |||||||  |||||||  ||||||||| ||||||||||||||||||||||| |  | |     
T  20091133 aaccttagatgcctttgattgcctgaacatgtctaatattgattaggagtgaatgtaagatgagattggacctgaaaagacttagaatgaaacaacttgg 20091232  T
Q  100 gaatctgacc-gaactcgccatggcgagc 127  Q
    || ||||||| ||||||||||||||||||    
T  20091233 gattctgacctgaactcgccatggcgagc 20091261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 21027129 - 21027058
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||| |||||||||| ||||||||| ||||||| |||||| |||||||||| |||||||||||||||    
T  21027129 ccttagatgcttttgagtgcttgaacatgtctaataatgattaggtaagaatgtaggatgagattgaacctg 21027058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 22237937 - 22237864
Alignment:
Q  134 gttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||||||| ||||||||||||||||||||| |||   ||||||||||||||| ||||||||||||||    
T  22237937 gttacagaatgccttgtttaggttaaatgcgatctttttcgcacgagttgatgtgagttgatcttagaggttag 22237864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 22238089 - 22238012
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga 80  Q
    |||||||| ||||||||||||||||||||| |||||||  |||||||||| || ||||||||||| |||||| |||||    
T  22238089 ccttagatatttttgagtgcctgaacatgtctaataatggttaggaaagattggagaatgagattaaacctggaaaga 22238012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 22921681 - 22921754
Alignment:
Q  134 gttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||||||| ||| |||||||||||||||||||||   ||||||||||||||| ||||||||||||||    
T  22921681 gttacagaatgccttgtttgggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggttag 22921754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 28194107 - 28194183
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaa 77  Q
    |||||| ||||||||||||||||||||| ||| | || || ||||||||||| |||||| |||||||||||||||||    
T  28194107 aaccttggatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacctgaaa 28194183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 20637157 - 20637084
Alignment:
Q  134 gttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||| ||| ||||||||||| |||||||||||||  |||||||||||||||| ||||| ||||||||    
T  20637157 gttacagaatgtcttgtttaggttaaaagcgatctttgtcgcatgagttgatgtgagttgatcttggaggttag 20637084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 49261648 - 49261575
Alignment:
Q  134 gttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||||||| ||||||||||| |||||||||||||   ||||||||||||||| ||||| ||||||||    
T  49261648 gttacagaatgccttgtttaggttaaaagcgatctttgtcgcacgagttgatgtgagttgatcttggaggttag 49261575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 21162188 - 21162117
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||| ||| ||||||||||||||| | || ||||||  ||| |||||||||||||||||||||||||||||    
T  21162188 ccttaaatgcttttgagtgcctgaataagtctaataacgattgggaaagaatgtagaatgagattgaacctg 21162117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 22354231 - 22354358
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaaatttaga 99  Q
    ||||||| ||| |||||||||| ||||||||| | ||||| ||||||||| || |||| ||||||||||||||| | ||| | |||||||||| ||  |     
T  22354231 aaccttatatgcttttgagtgcttgaacatgtcttataatgattaggaaataacgtaggatgagattgaacctggatagattgtagaatgaaacttgtgg 22354330  T
Q  100 gaatctgacc-gaactcgccatggcgag 126  Q
    || ||||||| |||||||||| ||||||    
T  22354331 gattctgacctgaactcgccacggcgag 22354358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 203
Target Start/End: Complemental strand, 12271852 - 12271786
Alignment:
Q  137 acagaatgcctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggt 203  Q
    |||||||||||| |||||||||||| || ||||||||   ||||||||||||||| |||||||||||    
T  12271852 acagaatgccttgttaggttaaatgtgacctttgtcgcacgagttgatgtgagttgatcttagaggt 12271786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 16759188 - 16759114
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctga 75  Q
    |||||||||||||||||||||||| |||| || ||||||| |||||| |||  | |||| |||||||||||||||    
T  16759188 aaccttagatgtttttgagtgcctaaacacgtataataatgattaggcaagtttttagattgagattgaacctga 16759114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 35981352 - 35981418
Alignment:
Q  8 gatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||||||||||||| ||| | || || ||||||||||| |||||| ||||||||||||||    
T  35981352 gatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacctg 35981418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 35981500 - 35981573
Alignment:
Q  134 gttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||||||| ||||||||||| |||||||||||||   || |||||||||||| ||||| ||||||||    
T  35981500 gttacagaatgccttgtttaggttaaaagcgatctttgtcgcacgaattgatgtgagttgatcttggaggttag 35981573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 41049627 - 41049700
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||||| ||||||||||||||||| |||||||  ||||| |||  | |||| ||||||||||||||    
T  41049627 aaccttagatgtttctgagtgcctgaacatgtataataatggttaggcaagtttttagattgagattgaacctg 41049700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 43697822 - 43697749
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||||||||||||||||||||||| || | || ||||| ||||| | |||| ||||||| ||||||    
T  43697822 aaccttagatgtttttgagtgcctgaacatgtctatttatgattagaaaagattctagattgagatttaacctg 43697749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 206
Target Start/End: Complemental strand, 21754347 - 21754271
Alignment:
Q  130 ttgtgttacagaatgcctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    |||| ||||||| |||||| |||||||||||| |||| ||||||   ||||||||||||||| |||| |||||||||    
T  21754347 ttgttttacagactgccttgttaggttaaatgtgatccttgtcgcacgagttgatgtgagttgatctcagaggttag 21754271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 21301199 - 21301245
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaa 49  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||    
T  21301199 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaa 21301245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 137 - 203
Target Start/End: Original strand, 21861385 - 21861451
Alignment:
Q  137 acagaatgcctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggt 203  Q
    |||||||||||| |||||||||||| ||  |||||||   ||||||||||||||| |||||||||||    
T  21861385 acagaatgccttgttaggttaaatgtgacatttgtcgcacgagttgatgtgagttgatcttagaggt 21861451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 35260718 - 35260788
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctga 75  Q
    ||||||| || ||||||||||||||||| ||||||| |||||| |||  | |||| |||||||||||||||    
T  35260718 ttagatgattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctga 35260788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 52940464 - 52940506
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattagg 47  Q
    ||||||| |||||||||||||||||||| ||||||||||||||    
T  52940464 ttagatgattttgagtgcctgaacatgtataataataattagg 52940506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 21895895 - 21895964
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||| || |||||||||||||| || ||||||| ||||||||||  | |||| ||||||||||||||    
T  21895895 ttagatgattatgagtgcctgaacaagtataataatgattaggaaagtttttagattgagattgaacctg 21895964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 33681316 - 33681243
Alignment:
Q  134 gttacagaatgccttt-ttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    |||||||| ||||||  ||| |||||||||||||||||||    ||||||||||||||| ||||||||||||||    
T  33681316 gttacagagtgccttgcttatgttaaatgcgatctttgtcacacgagttgatgtgagttgatcttagaggttag 33681243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 200
Target Start/End: Original strand, 21896078 - 21896137
Alignment:
Q  141 aatgcctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttaga 200  Q
    |||||||| |||||||||||| || ||||||||   ||||||||||||||| ||||||||    
T  21896078 aatgccttgttaggttaaatgtgacctttgtcgcacgagttgatgtgagttgatcttaga 21896137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 16381698 - 16381632
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaac 71  Q
    ||||||| ||||||||||||| |||||| ||| ||| ||||||||||  | |||||||| |||||||    
T  16381698 ttagatggttttgagtgcctggacatgtataagaatgattaggaaagtttttagaatgaaattgaac 16381632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 21787702 - 21787740
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataa 39  Q
    |||||||||||||||||||||||| || |||||||||||    
T  21787702 aaccttagatgtttttgagtgcctaaagatgtttaataa 21787740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 26065441 - 26065383
Alignment:
Q  16 tgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||||||||| ||||||| |||||| |||  | |||| ||||||||||||||    
T  26065441 tgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctg 26065383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 27652808 - 27652874
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaac 71  Q
    ||||||||||||||||||||||| |||  ||||||| |||||| |||  | |||| |||||||||||    
T  27652808 ttagatgtttttgagtgcctgaatatgcataataatgattaggcaagtttttagattgagattgaac 27652874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 48521102 - 48521036
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaac 71  Q
    |||||||||||||||| |||||| |||| ||||||| |||||| |||  | |||| |||||||||||    
T  48521102 ttagatgtttttgagtacctgaatatgtataataatgattaggcaagtttttagattgagattgaac 48521036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 16367873 - 16367942
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||| ||||||||||||||| |||| ||||||| |||||| |||  | |||| ||||| ||||||||    
T  16367873 ttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagaatgaacctg 16367942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 20248584 - 20248511
Alignment:
Q  134 gttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||||||| |||||||||||||||||  ||||||    ||||||||| | || ||||||||||||||    
T  20248584 gttacagaatgccttatttaggttaaatgcgattcttgtcgcacaagttgatgtaaattgatcttagaggttag 20248511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 21342610 - 21342537
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| ||||||||| ||||| |||| ||||||| |||||| |||  | |||| ||||| ||||||||    
T  21342610 aaccttagatgattttgagtgtctgaatatgtataataatgattaggcaagtttttagattgagaatgaacctg 21342537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 21347475 - 21347402
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| ||||||||| ||||| |||| ||||||| |||||| |||  | |||| ||||| ||||||||    
T  21347475 aaccttagatgattttgagtgtctgaatatgtataataatgattaggcaagtttttagattgagaatgaacctg 21347402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 21861157 - 21861226
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||| || |||||||||||||| || ||||||| |||||| |||  | |||| ||||||||||||||    
T  21861157 ttagatgattctgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacctg 21861226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 94; Significance: 4e-46; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 59179 - 59288
Alignment:
Q  18 agtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaatctgaccgaactcgc 117  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  59179 agtgcctgaacatgtctaataatgattaggacagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaacctgaccgaactcgc 59278  T
Q  118 catggcgagc 127  Q
    ||||||||||    
T  59279 catggcgagc 59288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 39592 - 39669
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga 80  Q
    ||||||||| |||||||| ||||||||||| || |||| ||||||||||||||||||||||||||||||||| |||||    
T  39592 ccttagatgcttttgagtacctgaacatgtctattaatgattaggaaagaatgtagaatgagattgaacctggaaaga 39669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 6 - 92
Target Start/End: Complemental strand, 40313 - 40226
Alignment:
Q  6 tagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaa 92  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||||||| || ||||||||||||||| ||||| | ||||||||||    
T  40313 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatggaggatgagattgaacctggaaagattgtagaatgaaa 40226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 26662 - 26595
Alignment:
Q  26 aacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaa 92  Q
    ||||||| ||||||| ||||||||||||||||| |||||||| |||||| ||||| | ||||||||||    
T  26662 aacatgtctaataatgattaggaaagaatgtaggatgagattaaacctggaaagattgtagaatgaaa 26595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 90; Significance: 1e-43; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 28496134 - 28496259
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaa 102  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||    
T  28496134 ccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagacttagaatgaaacttttgagaa 28496233  T
Q  103 tctgacc-gaactcgccatggcgagc 127  Q
    ||||||| ||||||||||||||||||    
T  28496234 tctgacctgaactcgccatggcgagc 28496259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 1561765 - 1561638
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaa-tttaga 99  Q
    ||||||||||| |||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||| ||| |||||||||||||| ||| ||    
T  1561765 aaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaagtagaatgagattgaacctggaaaaacttagaatgaaaacttttga 1561666  T
Q  100 gaatctgaccgaactcgccatggcgagc 127  Q
    ||||||||||||||| |||| |||||||    
T  1561665 gaatctgaccgaacttgccacggcgagc 1561638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 19303202 - 19303327
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaa 102  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |  ||    
T  19303202 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaaa 19303301  T
Q  103 tctgacc-gaactcgccatggcgagc 127  Q
    ||||||| |||||||||| |||||||    
T  19303302 tctgacctgaactcgccacggcgagc 19303327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 21939845 - 21939719
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 100  Q
    |||||||||||   |||||||||||||||||| ||||| | ||||||||||||||||| |||||||||| |||| ||||||||||||| ||| ||| |||    
T  21939845 aaccttagatgcccttgagtgcctgaacatgtgtaatattgattaggaaagaatgtaggatgagattgagcctggaaagacttagaataaaactttggag 21939746  T
Q  101 aatctgaccgaactcgccatggcgagc 127  Q
    |||||||| ||||||||||||||||||    
T  21939745 aatctgactgaactcgccatggcgagc 21939719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 29808544 - 29808670
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga--cttagaatgaaaatttagag 100  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||| |||||   ||||||||||| ||| | |    
T  29808544 ccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaacttt-ggg 29808642  T
Q  101 aatctgacc-gaactcgccatggcgagc 127  Q
    ||||||||| ||||||||||||||||||    
T  29808643 aatctgacctgaactcgccatggcgagc 29808670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 18457174 - 18457103
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18457174 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 18457103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 18409488 - 18409577
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaa 92  Q
    ||||||||| |||||||||||| ||||||| || |||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  18409488 ccttagatgcttttgagtgccttaacatgtctattaatgattaggaaagaatgtagaatgagattgaacctggaaagatttagaatgaaa 18409577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 20360632 - 20360703
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||    
T  20360632 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 20360703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 22779888 - 22779978
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaa 92  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| ||||| | ||||||||||    
T  22779888 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaa 22779978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 18821489 - 18821562
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  18821489 aaccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctg 18821562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 19652655 - 19652566
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagac-ttagaatgaa 91  Q
    ||||| |||||||||||||||||||||||| ||||||| ||||||||||| || |||||||||||||||||| |||||| ||||||||||    
T  19652655 ccttaaatgtttttgagtgcctgaacatgtctaataatgattaggaaagattgaagaatgagattgaacctggaaagactttagaatgaa 19652566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 20637953 - 20638026
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||    
T  20637953 aaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 20638026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 25611382 - 25611473
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaa 92  Q
    |||||||||||  ||||||||||||||||||| ||||||| |||||||  ||||| || ||||||||| ||||| |||||||||||||||||    
T  25611382 aaccttagatgcctttgagtgcctgaacatgtctaataatgattaggagtgaatgcagcatgagattggacctggaaagacttagaatgaaa 25611473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 17287457 - 17287547
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaa 92  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| ||| ||||| ||||| ||||| | ||||||||||    
T  17287457 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgtgattgtacctggaaagattgtagaatgaaa 17287547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 119
Target Start/End: Complemental strand, 29061000 - 29060883
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaaatttagaga 101  Q
    ||||||||| ||||||||||||||||||||  |||||| |||||||| |||||||| ||||||||||||||| ||||| | |||||||||  ||| || |    
T  29061000 ccttagatgcttttgagtgcctgaacatgtccaataatgattaggaaggaatgtaggatgagattgaacctggaaagattgtagaatgaacttttgga-a 29060902  T
Q  102 atctgacc-gaactcgcca 119  Q
    |||||||| ||||||||||    
T  29060901 atctgacctgaactcgcca 29060883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 15894089 - 15894217
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaa-atttaga 99  Q
    |||||||||||  ||||||||||||||||||| ||||| | |||||||  |||||||  ||||||||| ||||| ||||||||||||||||| |  | |     
T  15894089 aaccttagatgcctttgagtgcctgaacatgtctaatattgattaggagtgaatgtaagatgagattggacctggaaagacttagaatgaaagaacttgg 15894188  T
Q  100 gaatctgacc-gaactcgccatggcgagc 127  Q
    || ||||||| ||||||||||||||||||    
T  15894189 gattctgacctgaactcgccatggcgagc 15894217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 4189416 - 4189339
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga 80  Q
    ||||||||| ||||||||||||||||| || ||||||  |||||||||||||||||| |||||||| ||||| |||||    
T  4189416 ccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaaga 4189339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 4667874 - 4667951
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga 80  Q
    ||||||||| ||||||||||||||||| || ||||||  |||||||||||||||||| |||||||| ||||| |||||    
T  4667874 ccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaaga 4667951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 4674721 - 4674798
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga 80  Q
    ||||||||| ||||||||||||||||| || ||||||  |||||||||||||||||| |||||||| ||||| |||||    
T  4674721 ccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaaga 4674798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 20594233 - 20594156
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga 80  Q
    |||||||||||||||||||||| ||||||| |||  || |||||| |||||||||| ||||||||||||||| |||||    
T  20594233 ccttagatgtttttgagtgcctaaacatgtctaaatatgattagggaagaatgtaggatgagattgaacctggaaaga 20594156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 23019869 - 23019796
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| |||||||||||||||||||| | ||||| ||||||||||| | |||| ||||||||||||||    
T  23019869 aaccttagatgcttttgagtgcctgaacatgtgtgataatgattaggaaagattttagattgagattgaacctg 23019796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 31155059 - 31155136
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga 80  Q
    ||||||||| ||||||||||||||| | || ||||||  ||| ||||||||||||||||||||||||||||| |||||    
T  31155059 ccttagatgcttttgagtgcctgaataagtctaataacgattgggaaagaatgtagaatgagattgaacctggaaaga 31155136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 22334541 - 22334632
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaa 92  Q
    |||||||||||  ||||||||||||||||||| ||||| | |||||||  |||||||  ||||||||| ||||| ||| |||||||||||||    
T  22334541 aaccttagatgcctttgagtgcctgaacatgtctaatattgattaggagtgaatgtaagatgagattggacctggaaatacttagaatgaaa 22334632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 27332943 - 27333022
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga 80  Q
    ||||||||||| ||||||||| |||||||||| |||| || ||||||||||| | ||||||||| ||||||||| |||||    
T  27332943 aaccttagatgcttttgagtggctgaacatgtataatgatgattaggaaagattttagaatgaggttgaacctggaaaga 27333022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 27393683 - 27393762
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga 80  Q
    ||||||||||| ||||||||| |||||||||| |||| || ||||||||||| | ||||||||| ||||||||| |||||    
T  27393683 aaccttagatgcttttgagtggctgaacatgtataatgatgattaggaaagattttagaatgaggttgaacctggaaaga 27393762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 25603057 - 25603135
Alignment:
Q  14 tttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaa 92  Q
    ||||||||||||||||||| ||||||| |||||||  ||||| |  ||||||||| ||||| |||||||||||||||||    
T  25603057 tttgagtgcctgaacatgtctaataatgattaggagtgaatgcatgatgagattggacctggaaagacttagaatgaaa 25603135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 130 - 206
Target Start/End: Complemental strand, 1561614 - 1561537
Alignment:
Q  130 ttgtgttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    |||| ||||| |||||||| |||||||||||||||||||||||||   ||||||||||||||| ||| ||||||||||    
T  1561614 ttgttttacataatgccttgtttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcctagaggttag 1561537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 4185484 - 4185561
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga 80  Q
    ||||||||| |||||||||| |||||| || ||||||  |||| ||||||||||||| |||||||||||||| |||||    
T  4185484 ccttagatgcttttgagtgcatgaacaagtctaataacgattatgaaagaatgtagagtgagattgaacctggaaaga 4185561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 16920303 - 16920376
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| ||||||||||||||| |||| ||||||| ||||| ||||||||||| || |||||| |||||    
T  16920303 aaccttagatgcttttgagtgcctgaatatgtctaataatgattagaaaagaatgtaggataagattgtacctg 16920376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 130 - 206
Target Start/End: Original strand, 28496283 - 28496359
Alignment:
Q  130 ttgtgttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||   ||||||||||||||| ||||||||| ||||    
T  28496283 ttgtgttacagaatgccttgtttaggtt-aatgcgatctttgtcgcacgagttgatgtgagttgatcttagagtttag 28496359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 130 - 206
Target Start/End: Original strand, 29808694 - 29808770
Alignment:
Q  130 ttgtgttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||   ||||||||||||||| ||||||||| ||||    
T  29808694 ttgtgttacagaatgccttgtttaggtt-aatgcgatctttgtcgcacgagttgatgtgagttgatcttagagtttag 29808770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 135 - 206
Target Start/End: Original strand, 27333099 - 27333170
Alignment:
Q  135 ttacagaatgcctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||| || |||||||||||| |||| ||||||   ||||||||||||||| ||||||||||||||    
T  27333099 ttacagaatgctttgttaggttaaatgtgatccttgtcgcacgagttgatgtgagttgatcttagaggttag 27333170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 135 - 206
Target Start/End: Original strand, 27393839 - 27393910
Alignment:
Q  135 ttacagaatgcctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||| || |||||||||||| |||| ||||||   ||||||||||||||| ||||||||||||||    
T  27393839 ttacagaatgctttgttaggttaaatgtgatccttgtcgcacgagttgatgtgagttgatcttagaggttag 27393910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 206
Target Start/End: Complemental strand, 19652486 - 19652429
Alignment:
Q  149 tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    |||||| ||||||||||||||||||   ||||||||||||||| ||||||||||||||    
T  19652486 tttaggataaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggttag 19652429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 22080396 - 22080469
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||||||||||||| |||||||||| ||||||| ||||| ||||| |  ||| | ||||||||||||    
T  22080396 aaccttagatgtttttgagtgactgaacatgtctaataatgattagaaaagattagagattaagattgaacctg 22080469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 23019698 - 23019642
Alignment:
Q  150 ttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||||||||||||||||   ||||||||||||||| ||||| ||||||||    
T  23019698 ttaggttaaatgcgatctttgtcgaacgagttgatgtgagttgatcttggaggttag 23019642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 25644784 - 25644708
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaa 77  Q
    |||||||||||||||||||||||||  ||||| |||   | ||||||||||| | |||| |||||||||||||||||    
T  25644784 aaccttagatgtttttgagtgcctgttcatgtataacgttgattaggaaagattttagattgagattgaacctgaaa 25644708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 135 - 205
Target Start/End: Original strand, 4668028 - 4668098
Alignment:
Q  135 ttacagaatgcctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggtta 205  Q
    ||||||||||||||  |||||||||||||||| ||||||   |||||| |||||||| |||||||| ||||    
T  4668028 ttacagaatgccttgctaggttaaatgcgatccttgtcgcacgagttgttgtgagttgatcttagatgtta 4668098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 135 - 205
Target Start/End: Original strand, 4674875 - 4674945
Alignment:
Q  135 ttacagaatgcctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggtta 205  Q
    ||||||||||||||  |||||||||||||||| ||||||   |||||| |||||||| |||||||| ||||    
T  4674875 ttacagaatgccttgctaggttaaatgcgatccttgtcgcacgagttgttgtgagttgatcttagatgtta 4674945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 15041211 - 15041248
Alignment:
Q  2 accttagatgtttttgagtgcctgaacatgtttaataa 39  Q
    |||||||||||||||||||||||||| |||||||||||    
T  15041211 accttagatgtttttgagtgcctgaagatgtttaataa 15041248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 25629014 - 25629087
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||||| || || |||| ||||| | || |||| ||||||||| | |||||||||||||||||||||    
T  25629014 aaccttagatgttgttaagcgcctaaacatctctattaatgattaggaaatattgtagaatgagattgaacctg 25629087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 20109673 - 20109605
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacct 73  Q
    ||||||| || ||||||||||||||||| ||||||| |||||| |||  | |||| |||||||||||||    
T  20109673 ttagatgattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacct 20109605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 35008684 - 35008618
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaac 71  Q
    |||||||||||| ||||||||||||||| ||| ||| |||||| |||  | |||| |||||||||||    
T  35008684 ttagatgtttttaagtgcctgaacatgtataagaatgattaggcaagtttttagactgagattgaac 35008618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 11185953 - 11185880
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||  |||||||||||||||||||  |||| | |||||  |||| ||||| | |||||||||||||    
T  11185953 aaccttagatgcctttgagtgcctgaacatgtcgaatattgattagtgaagagtgtaggacgagattgaacctg 11185880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 22831953 - 22831880
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| |||||||||  ||||||||| ||||| | |||||  |||||| ||| | |||||||||||||    
T  22831953 aaccttagatgcttttgagtgtttgaacatgtctaatattgattagtgaagaatataggacgagattgaacctg 22831880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 191
Target Start/End: Complemental strand, 4189262 - 4189206
Alignment:
Q  135 ttacagaatgcctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtt 191  Q
    ||||||||||||||  |||||||||||||||| ||||||   |||||| ||||||||    
T  4189262 ttacagaatgccttgctaggttaaatgcgatcgttgtcgcacgagttgttgtgagtt 4189206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 19668679 - 19668611
Alignment:
Q  135 ttacagaatgcctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggt 203  Q
    ||||||||  |||| |||||||||||| || ||||||||   ||||||||||||||| ||||| |||||    
T  19668679 ttacagaacaccttgttaggttaaatgtgacctttgtcgcacgagttgatgtgagttgatcttggaggt 19668611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 22080576 - 22080624
Alignment:
Q  158 aatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||| ||||||   ||||||||||||||| ||||||||||||||    
T  22080576 aatgcgatccttgtcgcacgagttgatgtgagttgatcttagaggttag 22080624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 12468 - 12594
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 100  Q
    |||||||||||  ||||||||||||||||||| ||||| | ||||||||||||||||| ||||||||||||||| |||||| |||||||||| ||| |||    
T  12468 aaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacatagaatgaaactttggag 12567  T
Q  101 aatctgaccgaactcgccatggcgagc 127  Q
    |||||||| ||||||||||||||||||    
T  12568 aatctgactgaactcgccatggcgagc 12594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 83; Significance: 2e-39; HSPs: 3)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 7953 - 8079
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 100  Q
    |||||||||||  ||||||||||||||||||| ||||| | ||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||| |||    
T  7953 aaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggag 8052  T
Q  101 aatctgaccgaactcgccatggcgagc 127  Q
    ||||| || ||||||||||||||||||    
T  8053 aatctaacagaactcgccatggcgagc 8079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 132 - 173
Target Start/End: Original strand, 8105 - 8147
Alignment:
Q  132 gtgttacagaatgcctt-tttaggttaaatgcgatctttgtcg 173  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  8105 gtgttacagaatgccttgtttaggttaaatgcgatctttgtcg 8147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 53134 - 53203
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||| ||||||||||||||||| || ||||||| |||||| |||  | |||| ||||||||||||||    
T  53134 ttagatgattttgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacctg 53203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 207178 - 207304
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 100  Q
    |||||||||||  ||||||||||||||||||| ||||| | ||||||| ||||||||| ||||||||||||||| ||||||||||||||||| ||| |||    
T  207178 aaccttagatgcctttgagtgcctgaacatgtctaatattgattaggagagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggag 207277  T
Q  101 aatctgaccgaactcgccatggcgagc 127  Q
    |||||||| ||||||||||||||||||    
T  207278 aatctgactgaactcgccatggcgagc 207304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 2311 - 2186
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaaatttagaga 101  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| ||||| | |||||||||| ||  | ||    
T  2311 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggga 2212  T
Q  102 atctgacc-gaactcgccatggcgag 126  Q
     ||||||| |||||||||||||||||    
T  2211 ttctgacctgaactcgccatggcgag 2186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 2e-39; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 4588474 - 4588641
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 100  Q
    |||||||||||  ||||||||||||||||||| ||||| | ||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||| |||    
T  4588474 aaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctgtaaagacttagaatgaaactttggag 4588573  T
Q  101 aatctgaccgaactcgccatggcgagcgtttgtgttacagaatgcctt-tttaggttaaatgcgatctttgtcg 173  Q
    |||||||| ||||||      ||||||  | || |||||||||||||| |||||||||||||||| ||||||||    
T  4588574 aatctgactgaactc------gcgagcactagtattacagaatgccttgtttaggttaaatgcgagctttgtcg 4588641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 12340214 - 12340088
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 100  Q
    |||||||||||  ||||||||||||||||||| ||||| | ||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||| |||    
T  12340214 aaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggag 12340115  T
Q  101 aatctgaccgaactcgccatggcgagc 127  Q
    ||||| || ||||||||||||||||||    
T  12340114 aatctaactgaactcgccatggcgagc 12340088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 14669222 - 14669096
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 100  Q
    ||||||||||||  |||||||||||||||||| ||||| | | ||||||||||||||| ||||||||||||||| ||||||||||||||||| ||| |||    
T  14669222 aaccttagatgtcgttgagtgcctgaacatgtctaatattgaataggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggag 14669123  T
Q  101 aatctgaccgaactcgccatggcgagc 127  Q
    |||||||| ||||||||||||||||||    
T  14669122 aatctgactgaactcgccatggcgagc 14669096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 14179784 - 14179684
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 100  Q
    ||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  14179784 aaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacttggaaagacttagaatgaaaatttagag 14179685  T
Q  101 a 101  Q
    |    
T  14179684 a 14179684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 14666067 - 14665941
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 100  Q
    ||||||||||||  |||||||||||||||||  ||||| | ||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||| |||    
T  14666067 aaccttagatgtcgttgagtgcctgaacatggctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggag 14665968  T
Q  101 aatctgaccgaactcgccatggcgagc 127  Q
    |||||||| |||||||| |||||||||    
T  14665967 aatctgactgaactcgcaatggcgagc 14665941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 14735580 - 14735454
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 100  Q
    ||||||||||||  |||||||||||||||||  ||||| | ||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||| |||    
T  14735580 aaccttagatgtcgttgagtgcctgaacatggctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggag 14735481  T
Q  101 aatctgaccgaactcgccatggcgagc 127  Q
    |||||||| |||||||| |||||||||    
T  14735480 aatctgactgaactcgcaatggcgagc 14735454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 17247947 - 17248072
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga-cttagaatgaaaatttagaga 101  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||  ||||||||||| ||| | ||    
T  17247947 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaacttt-ggga 17248045  T
Q  102 atctgacc-gaactcgccatggcgagc 127  Q
    |||||||| ||||||||||||||||||    
T  17248046 atctgacctgaactcgccatggcgagc 17248072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 14573048 - 14572924
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaa 102  Q
    |||||||||  ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||  || |  ||    
T  14573048 ccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagacttagaatgaaacctttggaaa 14572949  T
Q  103 tctgacc-gaactcgccatggcgag 126  Q
    ||||||| |||||||||||||||||    
T  14572948 tctgacctgaactcgccatggcgag 14572924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 13209987 - 13210112
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaa-tttaga 99  Q
    ||||||||||| |||||||||||| ||||||| ||||| | |||||||||||| |||||||||||||||||||| |||||||||||||||||| | | ||    
T  13209987 aaccttagatgcttttgagtgcctaaacatgtctaata-tgattaggaaagaaagtagaatgagattgaacctggaaagacttagaatgaaaactcttga 13210085  T
Q  100 gaatctgaccgaactcgccatggcgag 126  Q
    |||| ||||||||||||||||||||||    
T  13210086 gaatgtgaccgaactcgccatggcgag 13210112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 12852037 - 12852149
Alignment:
Q  15 ttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaatctgaccgaact 114  Q
    |||||||||||||||||| ||||| | ||||||||||||||||| ||||||||||| ||| ||||||||||||||||| ||| || |||||||| |||||    
T  12852037 ttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaatctggaaagacttagaatgaaacttttgataatctgactgaact 12852136  T
Q  115 cgccatggcgagc 127  Q
    |||||||||||||    
T  12852137 cgccatggcgagc 12852149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 11424424 - 11424513
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaa 92  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||    
T  11424424 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaataatgtagaatgagattgaacctggaaagatttagaatgaaa 11424513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 18438994 - 18438905
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaa 92  Q
    ||||||||| |||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||| ||||| |||||||||||    
T  18438994 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaaaatgagattgaacctggaaagatttagaatgaaa 18438905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 53070360 - 53070431
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  53070360 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 53070431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 3 - 119
Target Start/End: Original strand, 25476046 - 25476163
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga-cttagaatgaaaatttagaga 101  Q
    |||||||||||||||||| ||||||||||| ||||||| |||| |||||||||||||||||||| ||||||| |||||  ||||||||||| ||| | ||    
T  25476046 ccttagatgtttttgagtacctgaacatgtctaataatgattatgaaagaatgtagaatgagatcgaacctggaaagattttagaatgaaacttttg-ga 25476144  T
Q  102 atctgacc-gaactcgcca 119  Q
    |||||||| ||||||||||    
T  25476145 atctgacctgaactcgcca 25476163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 26687347 - 26687221
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaaatttagaga 101  Q
    ||||||||| |||||||||||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| ||||| | |||||||||| ||  | ||    
T  26687347 ccttagatgcttttgagtgcctaaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggga 26687248  T
Q  102 atctgacc-gaactcgccatggcgagc 127  Q
     ||||||| |||||||||| |||||||    
T  26687247 ttctgacctgaactcgccacggcgagc 26687221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 14576494 - 14576583
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaa 92  Q
    |||||||||  ||||||||||||||||||| |||| || ||||| |||||||||||||||| |||||||||| |||||||||||||||||    
T  14576494 ccttagatgcctttgagtgcctgaacatgtctaattatgattagaaaagaatgtagaatgacattgaacctggaaagacttagaatgaaa 14576583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 14973314 - 14973237
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga 80  Q
    ||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||| |||||||    
T  14973314 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattaaaccagaaaaga 14973237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 49389305 - 49389394
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagac-ttagaatgaa 91  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||| || |||||||||||||||||| | |||| ||||||||||    
T  49389305 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagactttagaatgaa 49389394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 40213384 - 40213507
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaaatttagagaat 103  Q
    ||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| ||||| | ||||||| || ||| | ||||    
T  40213384 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatg-aacttttgggaat 40213482  T
Q  104 ctgacc-gaactcgccatggcgagc 127  Q
    || ||| |||||||||| |||||||    
T  40213483 ctaacctgaactcgccacggcgagc 40213507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 9513370 - 9513280
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga-cttagaatgaaa 92  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||| |  ||||||||||||||||||||||||  |||||||||||    
T  9513370 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctgaaaagattttagaatgaaa 9513280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 9521345 - 9521255
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga-cttagaatgaaa 92  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||| |  ||||||||||||||||||||||||  |||||||||||    
T  9521345 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctgaaaagattttagaatgaaa 9521255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 12933971 - 12934061
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga-cttagaatgaaa 92  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||| |  |||||||||||||||||| |||||  |||||||||||    
T  12933971 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctggaaagattttagaatgaaa 12934061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 17488317 - 17488227
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaa 92  Q
    |||||||||  ||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| ||||| | ||||||||||    
T  17488317 ccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaa 17488227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 17499799 - 17499709
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaa 92  Q
    |||||||||  ||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| ||||| | ||||||||||    
T  17499799 ccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaa 17499709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 16097790 - 16097713
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga 80  Q
    ||||| ||||||||||||| |||||||||| ||||||| ||||||||||| || ||||||||||||||||||||||||    
T  16097790 ccttaaatgtttttgagtgtctgaacatgtctaataattattaggaaagattggagaatgagattgaacctgaaaaga 16097713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 20698106 - 20698179
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| ||||||||| |||||||||| ||||||| ||||||||||||||||| |||||||||||||||    
T  20698106 aaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 20698179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 1644344 - 1644433
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagac-ttagaatgaa 91  Q
    |||| ||||||||||||||||||||||||| | ||||| ||||||||||| |  ||||||||||||||||||| ||||| ||||||||||    
T  1644344 ccttggatgtttttgagtgcctgaacatgtctgataatgattaggaaagattagagaatgagattgaacctgagaagactttagaatgaa 1644433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 130 - 206
Target Start/End: Complemental strand, 32307980 - 32307903
Alignment:
Q  130 ttgtgttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    |||||||||| |||||||| |||||||||||||||||||||||||   ||||||||||||||| ||||||||||||||    
T  32307980 ttgtgttacataatgccttgtttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggttag 32307903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 13442724 - 13442644
Alignment:
Q  13 ttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaa 92  Q
    |||||||||||||||||||| ||||||| ||||||||| ||||||| ||||||||||||||| ||||| | ||||||||||    
T  13442724 ttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaaagattgtagaatgaaa 13442644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 16104240 - 16104160
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagactt 83  Q
    |||||||||||| ||||||||||||||||| ||||||| ||||||||||| || |||||||| |||||||||  |||||||    
T  16104240 ccttagatgtttctgagtgcctgaacatgtctaataatgattaggaaagattggagaatgaggttgaacctgggaagactt 16104160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 2050860 - 2050931
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacc 72  Q
    |||||||||||||||||||||||| ||||||| ||||||| ||||||||||| | |||| ||||||||||||    
T  2050860 aaccttagatgtttttgagtgcctcaacatgtgtaataatgattaggaaagattctagattgagattgaacc 2050931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 324693 - 324627
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaac 71  Q
    ||||||| ||||||||||||||| |||| ||||||| ||||||||||| ||||||||||||||||||    
T  324693 ttagatgattttgagtgcctgaatatgtataataatgattaggaaagattgtagaatgagattgaac 324627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 17247181 - 17247239
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaat 61  Q
    ||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||    
T  17247181 ccttagatgtttttgagtgccggaacatgtctaataatgattaggaaagaatgtagaat 17247239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 32308128 - 32308058
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacct 73  Q
    ||||||||| |||||||||||||||||| | ||||||| ||||||||||| || |||||||||||||||||    
T  32308128 ccttagatgcttttgagtgcctgaacatatctaataatgattaggaaagattggagaatgagattgaacct 32308058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 43842638 - 43842572
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattga 69  Q
    ||||||||| |||||||||||||| ||||| ||||||| ||||||||||||||||| ||||||||||    
T  43842638 ccttagatgcttttgagtgcctgagcatgtctaataatgattaggaaagaatgtaggatgagattga 43842572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 206
Target Start/End: Original strand, 12934120 - 12934197
Alignment:
Q  130 ttgtgttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    |||||||||||| | |||| |||||||||||||||||||||||||   ||||||||||||||| ||||||||||||||    
T  12934120 ttgtgttacagacttccttgtttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggttag 12934197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 206
Target Start/End: Original strand, 13210137 - 13210214
Alignment:
Q  130 ttgtgttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||   ||||||||||||||| ||| ||||||||||    
T  13210137 ttgtgttacagaatgccttgtttaggttaaatgtgatctttgtcgcacgagttgatgtgagttgatcctagaggttag 13210214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 206
Target Start/End: Original strand, 49667893 - 49667970
Alignment:
Q  130 ttgtgttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    |||||||||||| |||||| |||||||||||| ||||||||||||   ||||||||||||||| ||||||||||||||    
T  49667893 ttgtgttacagactgccttgtttaggttaaatacgatctttgtcgcacgagttgatgtgagttgatcttagaggttag 49667970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 14234952 - 14234876
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaa 77  Q
    |||||||||| ||||||||||||||||||||| |||| || ||||||||||| | |||| |||||||||||| ||||    
T  14234952 aaccttagatttttttgagtgcctgaacatgtataatgatgattaggaaagattatagattgagattgaacccgaaa 14234876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 132 - 206
Target Start/End: Complemental strand, 16104090 - 16104015
Alignment:
Q  132 gtgttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    |||||||||| |||||| ||||||||||||||| |||||||||   ||||||||||||||| ||||||||||||||    
T  16104090 gtgttacagactgccttgtttaggttaaatgcgctctttgtcgcacgagttgatgtgagttaatcttagaggttag 16104015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 23083022 - 23083147
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaa 102  Q
    ||||||||| ||||||||||||| | |||| ||||| | ||||||| | ||||||| ||||||||| ||||| ||||| ||||||||||| |||   ||     
T  23083022 ccttagatgcttttgagtgcctggatatgtctaatagtgattaggacaaaatgtaggatgagattggacctggaaagatttagaatgaaactttttggat 23083121  T
Q  103 tctgacc--gaactcgccatggcgag 126  Q
    |||||||   ||||||||||||||||    
T  23083122 tctgacccttaactcgccatggcgag 23083147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 49667745 - 49667834
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga-cttagaatgaaa 92  Q
    ||||||||||||| ||| |||||||||||| ||||||| ||||||||||| |  |||||||||||||||||| |||||  |||||||||||    
T  49667745 ccttagatgtttt-gagcgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctggaaagattttagaatgaaa 49667834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 1465068 - 1465141
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||||||||||||||||||| ||| | || || |||| |||||| |||||| ||||||||||||||    
T  1465068 aaccttagatgtttttgagtgcctgaacttgtatgatgatgattatgaaagattgtagattgagattgaacctg 1465141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 12171778 - 12171827
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaaga 52  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  12171778 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaaga 12171827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 12399657 - 12399584
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||||||||| ||| ||| ||| | |||||||||    
T  12399657 aaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatataggatgggtttgaacctg 12399584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 15471386 - 15471313
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||||||||||| ||||||||||| |||| || ||||||||||| || ||| | ||||||||||||    
T  15471386 aaccttagatgtttttgagtccctgaacatgtataatgatgattaggaaagattggagattaagattgaacctg 15471313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 30030290 - 30030217
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||  |||||||| |||||||||| ||||||| |||| |||||||||| | |||||||||||||||    
T  30030290 aaccttagatgcctttgagtgtctgaacatgtctaataatgattacgaaagaatgtgggatgagattgaacctg 30030217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 206
Target Start/End: Original strand, 1644492 - 1644569
Alignment:
Q  130 ttgtgttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    |||||||||| | |||||| |||| ||||||||||||| ||||||   ||||||||||||||| ||||||||||||||    
T  1644492 ttgtgttacaaactgccttgtttaagttaaatgcgatccttgtcgcacgagttgatgtgagttgatcttagaggttag 1644569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 206
Target Start/End: Complemental strand, 9513220 - 9513143
Alignment:
Q  130 ttgtgttacagaatgccttt-ttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    |||||||||||||||||||  ||| ||||||||||||||||||||    |||| ||||||||| ||||||||||||||    
T  9513220 ttgtgttacagaatgccttgcttatgttaaatgcgatctttgtcgcacaagtttatgtgagttaatcttagaggttag 9513143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 206
Target Start/End: Complemental strand, 9521195 - 9521118
Alignment:
Q  130 ttgtgttacagaatgccttt-ttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    |||||||||||||||||||  ||| ||||||||||||||||||||    |||| ||||||||| ||||||||||||||    
T  9521195 ttgtgttacagaatgccttgcttatgttaaatgcgatctttgtcgcacaagtttatgtgagttaatcttagaggttag 9521118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 12171918 - 12171991
Alignment:
Q  134 gttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||||||| |||||||||||||||||  ||||||    |||||||||||||| ||||||||||||||    
T  12171918 gttacagaatgccttgtttaggttaaatgcgattcttgtcgcacaagttgatgtgagttgatcttagaggttag 12171991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 22109938 - 22110007
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||||||||||||||||||| ||||||| |||||| |||  | |||  ||||||||||||||    
T  22109938 ttagatgtttttgagtgcctgaacatgtataataatgattaggcaagtttttagtttgagattgaacctg 22110007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 52523390 - 52523459
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||| |||||||||||||||||||| ||||||| ||||||||||| | |||  ||| ||||||||||    
T  52523390 ttagatgattttgagtgcctgaacatgtgtaataattattaggaaagattctagtttgatattgaacctg 52523459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 23275203 - 23275133
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaac 71  Q
    ||||||||||| ||||||||||||||| |||| ||||||| |||||| |||  | |||| |||||||||||    
T  23275203 aaccttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaac 23275133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 1465223 - 1465296
Alignment:
Q  134 gttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||||||| ||||||||||| |  ||||||||||   ||||||||||||||| ||||| ||||||||    
T  1465223 gttacagaatgccttgtttaggttaaaagtaatctttgtcgcacgagttgatgtgagttgatcttggaggttag 1465296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 14234798 - 14234725
Alignment:
Q  134 gttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||||||| ||||||||||||| |||||||||||    ||||||||| |||| ||||| ||||||||    
T  14234798 gttacagaatgccttgtttaggttaaatgtgatctttgtcgaacaagttgatgttagttgatcttggaggttag 14234725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 14501661 - 14501588
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| ||||||||||||||| |||| ||||||| |||||| |||  | |||| |||||||| |||||    
T  14501661 aaccttagatgattttgagtgcctgaatatgtataataatgattaggcaaggttttagattgagattggacctg 14501588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 15471232 - 15471159
Alignment:
Q  134 gttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    |||||||||||| || |||||||||||||||||||||||||   |||||||||| || | ||||| ||||||||    
T  15471232 gttacagaatgctttgtttaggttaaatgcgatctttgtcgcacgagttgatgttagatgatcttggaggttag 15471159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 206
Target Start/End: Complemental strand, 16097621 - 16097564
Alignment:
Q  149 tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    |||| ||||||||||||||||||||   ||||||||||||||| ||||||||| ||||    
T  16097621 tttatgttaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagagattag 16097564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 49389458 - 49389515
Alignment:
Q  149 tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    |||||||||||||||||| ||||||   ||||||||||| ||| ||||||||||||||    
T  49389458 tttaggttaaatgcgatccttgtcgcacgagttgatgtgtgttgatcttagaggttag 49389515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 16809847 - 16809778
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||| ||| |||||||||| |||||||    |||||| ||||||||||||||||| |||||||||| ||||    
T  16809847 aaccttaaatgcttttgagtgcttgaacat----aataatgattaggaaagaatgtaggatgagattgatcctg 16809778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 42386873 - 42386797
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaa 77  Q
    |||||||| ||||| ||||||| ||||||||  ||||||| |||||| |||| | |||| || ||||||||||||||    
T  42386873 aaccttagttgtttatgagtgcatgaacatgcataataatgattaggcaagactttagactgtgattgaacctgaaa 42386797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 173
Target Start/End: Complemental strand, 14665912 - 14665873
Alignment:
Q  135 ttacagaatgcctt-tttaggttaaatgcgatctttgtcg 173  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  14665912 ttacagaatgccttgtttaggttaaatgcgatctttgtcg 14665873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 173
Target Start/End: Complemental strand, 14735425 - 14735386
Alignment:
Q  135 ttacagaatgcctt-tttaggttaaatgcgatctttgtcg 173  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  14735425 ttacagaatgccttgtttaggttaaatgcgatctttgtcg 14735386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 316654 - 316612
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattagg 47  Q
    ||||||||||||||||||||||| |||| ||||||| ||||||    
T  316654 ttagatgtttttgagtgcctgaatatgtataataatgattagg 316612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 605950 - 606023
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| |||||||||||||||  ||| ||||||| |||||| ||   | |||| ||||||||||||||    
T  605950 aaccttagatgattttgagtgcctgaatgtgtataataatgattaggcaattttctagattgagattgaacctg 606023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 12378458 - 12378385
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| ||||||||||||||| ||||  |||||| |||||| | |  | |||| ||||||||||||||    
T  12378458 aaccttagatgattttgagtgcctgaatatgtacaataatgattaggcatgtttttagattgagattgaacctg 12378385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 23318333 - 23318390
Alignment:
Q  13 ttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaa 70  Q
    |||||||||||||||||||||||| ||| |||||| || ||| |||| ||| ||||||    
T  23318333 ttttgagtgcctgaacatgtttaagaatgattaggcaaaaatttagattgaaattgaa 23318390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 23412832 - 23412905
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| ||||||||||||||| |||| ||| ||| |||||| |||  | |||| |||||||| |||||    
T  23412832 aaccttagatgattttgagtgcctgaatatgtataaaaatgattaggcaagtttttagattgagattggacctg 23412905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 43927638 - 43927597
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattag 46  Q
    ||||||| |||||||||||||||||||| ||||||| |||||    
T  43927638 ttagatgattttgagtgcctgaacatgtataataatgattag 43927597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 45797701 - 45797632
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||| ||||||||||||||| |||| ||||||| |||||| |||  | |||| |||||||| |||||    
T  45797701 ttagatgattttgagtgcctgaatatgtataataatgattaggtaagtttttagattgagattggacctg 45797632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 77; Significance: 6e-36; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 80005 - 80117
Alignment:
Q  15 ttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaatctgaccgaact 114  Q
    |||||||||||||||||| ||||| | ||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||| ||||||||||| |||||    
T  80005 ttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaatctgactgaact 80104  T
Q  115 cgccatggcgagc 127  Q
    || ||||||||||    
T  80105 cgacatggcgagc 80117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 22509 - 22559
Alignment:
Q  156 taaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||||||||||   ||||||||||||||| ||||||||||||||    
T  22509 taaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggttag 22559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 10372 - 10246
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 100  Q
    |||||||||||  ||||||||||| ||||||| || || | ||||||||||||||||| ||||||||||||||| |||||||||||| |||| ||| |||    
T  10372 aaccttagatgcctttgagtgcctaaacatgtctattattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaaggaaactttggag 10273  T
Q  101 aatctgaccgaactcgccatggcgagc 127  Q
    |||||||| ||||||||||||||||||    
T  10272 aatctgactgaactcgccatggcgagc 10246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 10222 - 10160
Alignment:
Q  130 ttgtgttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtt 191  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||  |||||| | ||||||    
T  10222 ttgtgttacagaatgccttgtttaggttaaatgcgatctttgtcgtacgagttgttatgagtt 10160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 9493 - 9619
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 100  Q
    |||||||||||  ||||||||||||||||||| ||||| | |||| |||||||||||| ||||||||||| ||| ||||||||||||||||| ||| |||    
T  9493 aaccttagatgcctttgagtgcctgaacatgtctaatattgattacgaaagaatgtaggatgagattgaatctggaaagacttagaatgaaactttggag 9592  T
Q  101 aatctgaccgaactcgccatggcgagc 127  Q
    |||||||| ||||||| ||||||||||    
T  9593 aatctgactgaactcgtcatggcgagc 9619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 476 - 364
Alignment:
Q  15 ttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaatctgaccgaact 114  Q
    |||||||||||||||||| ||||| | ||||||||||||||||| ||||||||||||||| ||| |||||||||| || ||| ||||||||||| |||||    
T  476 ttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaatacttagaatggaactttggagaatctgactgaact 377  T
Q  115 cgccatggcgagc 127  Q
    |||||||||||||    
T  376 cgccatggcgagc 364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 173
Target Start/End: Complemental strand, 335 - 296
Alignment:
Q  135 ttacagaatgcctt-tttaggttaaatgcgatctttgtcg 173  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  335 ttacagaatgccttgtttaggttaaatgcgatctttgtcg 296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 71; Significance: 2e-32; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 17240 - 17115
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga-cttagaatgaaaatttagaga 101  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||  ||||||| |||| || ||||    
T  17240 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggatagattttagaat-aaaactttgaga 17142  T
Q  102 atctgacc-gaactcgccatggcgagc 127  Q
    || ||||| ||||||||||||||||||    
T  17141 atatgacctgaactcgccatggcgagc 17115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 42 - 123
Target Start/End: Original strand, 7471 - 7552
Alignment:
Q  42 attaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaatctgaccgaactcgccatggc 123  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||| || |||||||| ||||||||||||||    
T  7471 attaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggataatctgactgaactcgccatggc 7552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 71; Significance: 2e-32; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 24310 - 24436
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagag 100  Q
    |||||||||||   |||||||||||||||||| ||||| | ||||||||||||| ||| ||||||||||||||  ||||||||||||||||| ||| ||     
T  24310 aaccttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatttaggatgagattgaacctagaaagacttagaatgaaactttggat 24409  T
Q  101 aatctgaccgaactcgccatggcgagc 127  Q
    |||||||| ||||||||||||||||||    
T  24410 aatctgactgaactcgccatggcgagc 24436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 70; Significance: 9e-32; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 16876 - 16965
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaa 92  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  16876 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagatttagaatgaaa 16965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 79021 - 79094
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| |||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  79021 aaccttagatgcttttgagtgcatgaacatgtttaataatgattaggaaggaatgtagaatgagattgaacctg 79094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 69; Significance: 4e-31; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 4968 - 4842
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga--cttagaatgaaaatttagag 100  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||| |||||   ||||||||||| ||| | |    
T  4968 ccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaacttt-ggg 4870  T
Q  101 aatctgacc-gaactcgccatggcgagc 127  Q
    ||||||||| ||||||||||||||||||    
T  4869 aatctgacctgaactcgccatggcgagc 4842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 12550 - 12424
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga--cttagaatgaaaatttagag 100  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||| |||||   ||||||||||| ||| | |    
T  12550 ccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaacttt-ggg 12452  T
Q  101 aatctgacc-gaactcgccatggcgagc 127  Q
    ||||||||| ||||||||||||||||||    
T  12451 aatctgacctgaactcgccatggcgagc 12424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 22502 - 22376
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga--cttagaatgaaaatttagag 100  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||| |||||   ||||||||||| ||| | |    
T  22502 ccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaacttt-ggg 22404  T
Q  101 aatctgacc-gaactcgccatggcgagc 127  Q
    ||||||||| ||||||||||||||||||    
T  22403 aatctgacctgaactcgccatggcgagc 22376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 1739 - 1863
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga-cttagaatgaaaatttagaga 101  Q
    ||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||  ||||||||||| ||| || |    
T  1739 ccttagatgtttt-gagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaactttgga-a 1836  T
Q  102 atctgacc-gaactcgccatggcgagc 127  Q
    |||||||| ||| ||||||||||||||    
T  1837 atctgacctgaattcgccatggcgagc 1863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 67; Significance: 6e-30; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 25726 - 25851
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaaatttagaga 101  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||| | |||||||||  ||| || |    
T  25726 ccttagatggttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgaaaagattgtagaatgaatttttgga-a 25824  T
Q  102 atctgacc-gaactcgccatggcgagc 127  Q
    |||||||| |||||||||| |||||||    
T  25825 atctgacctgaactcgccacggcgagc 25851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 33155 - 33245
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga-cttagaatgaaa 92  Q
    ||||||||| || |||||||||| |||||| ||||||| ||||||||||||||||| ||||||||||||||| |||||  |||||||||||    
T  33155 ccttagatgcttctgagtgcctggacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattttagaatgaaa 33245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 364 - 275
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaa 92  Q
    ||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| ||||| |||||||||||    
T  364 ccttatatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagatttagaatgaaa 275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 39219 - 39130
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaa 92  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||| || ||||||||    
T  39219 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttgaatgaaa 39130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 20572 - 20483
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaa 92  Q
    ||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||| ||||| |||||||||||    
T  20572 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaataagattgaacctggaaagatttagaatgaaa 20483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 63; Significance: 1e-27; HSPs: 2)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 15276 - 15401
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga-cttagaatgaaaatttagaga 101  Q
    ||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||| | |||  ||||||||||| ||| | ||    
T  15276 ccttagatgcttttgagtgcctgaatatgtttaataatgattaggaaagaatgtagaatgagattgaatctggatagattttagaatgaaacttt-ggga 15374  T
Q  102 atctgacc-gaactcgccatggcgagc 127  Q
    |||||||| ||||||||||| ||||||    
T  15375 atctgacctgaactcgccatagcgagc 15401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 13102 - 13032
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctga 75  Q
    ||||||| |||||||||||||| ||||| || |||| |||||| |||  | |||| |||||||||||||||    
T  13102 ttagatgattttgagtgcctgaccatgtatattaatgattaggcaagtttttagattgagattgaacctga 13032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 20863 - 20737
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaaatttagaga 101  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| ||||| | |||||||||| ||  | ||    
T  20863 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattatagaatgaaacttgtggga 20764  T
Q  102 atctgacc-gaactcgccatggcgagc 127  Q
     ||||||| |||||||||| |||||||    
T  20763 ttctgacctgaactcgccacggcgagc 20737  T

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Target: scaffold0150 (Bit Score: 63; Significance: 1e-27; HSPs: 2)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 32543 - 32453
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagac-ttagaatgaaa 92  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||| || |||||||||||||||||| |||||| |||||||||||    
T  32543 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagactttagaatgaaa 32453  T

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Target: scaffold0150; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 173
Target Start/End: Complemental strand, 32394 - 32350
Alignment:
Q  130 ttgtgttacagaatgcctt-tttaggttaaatgcgatctttgtcg 173  Q
    |||||||||| |||||||| |||||||||||||||||||||||||    
T  32394 ttgtgttacataatgccttgtttaggttaaatgcgatctttgtcg 32350  T

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Target: scaffold0028 (Bit Score: 63; Significance: 1e-27; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 133113 - 133023
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagac-ttagaatgaaa 92  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||| || |||||||||||||||||| |||||| |||||||||||    
T  133113 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagactttagaatgaaa 133023  T

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Target: scaffold0028; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 130 - 206
Target Start/End: Complemental strand, 132964 - 132887
Alignment:
Q  130 ttgtgttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    |||| ||||| |||||||| ||||||||||||| |||||||||||   ||||||||||||||| ||||||||||||||    
T  132964 ttgtcttacataatgccttgtttaggttaaatgtgatctttgtcgcacgagttgatgtgagttgatcttagaggttag 132887  T

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Target: scaffold0011 (Bit Score: 63; Significance: 1e-27; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 52372 - 52246
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaaatttagaga 101  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| ||||| | |||||||||| ||  | ||    
T  52372 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggga 52273  T
Q  102 atctgacc-gaactcgccatggcgagc 127  Q
     ||||||| |||||||||| |||||||    
T  52272 ttctgacctgaactcgccacggcgagc 52246  T

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Target: scaffold0011; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 167649 - 167721
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacct 73  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||| ||| ||||||||||||||    
T  167649 aaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacct 167721  T

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Target: scaffold0046 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 122 - 206
Target Start/End: Complemental strand, 11610 - 11525
Alignment:
Q  122 gcgagcgtttgtgttacagaatgcc-tttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    |||||| |||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  11610 gcgagcttttgtgttacagaatgccctttttaggttgaatgcgatctttgtcgttcgagttgatgtgagttaatcttagaggttag 11525  T

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Target: scaffold0876 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 2744 - 2823
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga 80  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| |||||    
T  2744 aaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaaga 2823  T

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Target: scaffold0540 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 674 - 800
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaaatttagaga 101  Q
    ||||| ||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| | |||||||||  ||| || |    
T  674 ccttatatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaatctgaaaagattgtagaatgaacttttgga-a 772  T
Q  102 atctgacc-gaactcgccatggcgagcg 128  Q
    |||||||| |||||||||| || |||||    
T  773 atctgacctgaactcgccacggtgagcg 800  T

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Target: scaffold0352 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 17667 - 17794
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaaatttaga 99  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| | ||| | |||||||||| ||  |     
T  17667 aaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggatagattgtagaatgaaacttgtgg 17766  T
Q  100 gaatctgacc-gaactcgccatggcgag 126  Q
    || ||||||| |||||||||| ||||||    
T  17767 gattctgacctgaactcgccacggcgag 17794  T

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Target: scaffold0266 (Bit Score: 59; Significance: 3e-25; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 18619 - 18709
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaa 92  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| ||||| | ||||||||||    
T  18619 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaa 18709  T

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Target: scaffold0217 (Bit Score: 59; Significance: 3e-25; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 16260 - 16386
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga-cttagaatgaaaatttagaga 101  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||| |||||  || ||||||||  || |  |    
T  16260 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttagaatgagattgaacctggaaagattttcgaatgaaacgtttggaa 16359  T
Q  102 atctgacc-gaactcgccatggcgagc 127  Q
    |||| ||| ||||||||||||||||||    
T  16360 atctaacctgaactcgccatggcgagc 16386  T

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Target: scaffold0556 (Bit Score: 58; Significance: 1e-24; HSPs: 3)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 7271 - 7194
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga 80  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||| || |||||||||||||||||| |||||    
T  7271 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaaga 7194  T

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Target: scaffold0556; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 7118 - 7045
Alignment:
Q  134 gttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||||||| |||||||||||||||||  ||||||    |||||||||||||| ||||||||||||||    
T  7118 gttacagaatgccttgtttaggttaaatgcgattcttgtcgcacaagttgatgtgagttgatcttagaggttag 7045  T

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Target: scaffold0556; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 8478 - 8405
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||| ||||||||| ||| ||||| |||| ||||||| ||||| ||||| | |||| ||||||||||||||    
T  8478 aaccttaaatgtttttgggtgtctgaatatgtgtaataatgattagaaaagattctagattgagattgaacctg 8405  T

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Target: scaffold0456 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 10096 - 10169
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||    
T  10096 aaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 10169  T

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Target: scaffold0034 (Bit Score: 58; Significance: 1e-24; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 51545 - 51622
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga 80  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||| |||||    
T  51545 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctggaaaga 51622  T

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Target: scaffold0034; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 32843 - 32774
Alignment:
Q  134 gttacagaatgcctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggt 203  Q
    ||||||||||||||| || |||||||||||||||||||||   ||||||||||||||| |||||||||||    
T  32843 gttacagaatgccttgttgggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggt 32774  T

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Target: scaffold0034; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 32994 - 32928
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaac 71  Q
    ||||||| || ||||||||||||||||| ||||||| ||||||||||| | |||| |||||||||||    
T  32994 ttagatgattctgagtgcctgaacatgtgtaataatgattaggaaagattctagattgagattgaac 32928  T

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Target: scaffold0001 (Bit Score: 58; Significance: 1e-24; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 161145 - 161056
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagac-ttagaatgaa 91  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||| || |||||||||||||||||| | |||| ||||||||||    
T  161145 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagactttagaatgaa 161056  T

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Target: scaffold0001; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 160992 - 160919
Alignment:
Q  134 gttacagaatgccttt-ttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||| |||  ||||| |||||| |||||||||||   ||||||||||||||| ||||||||||||||    
T  160992 gttacagaatgtcttggttaggataaatgtgatctttgtcgcacgagttgatgtgagttgatcttagaggttag 160919  T

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Target: scaffold0389 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 13267 - 13343
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaa 77  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||| |||||||    
T  13267 aaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgagcctgaaa 13343  T

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Target: scaffold0351 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 16730 - 16654
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaa 77  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| | ||||||||||||||||    
T  16730 aaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggacgagattgaacctgaaa 16654  T

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Target: scaffold0503 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 12388 - 12317
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||| ||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  12388 ccttagatgcttttgagtgtctgaatatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 12317  T

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Target: scaffold0130 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 28996 - 28925
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||| |||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  28996 ccttagatgcttttgagttcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 28925  T

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Target: scaffold0130; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 1368 - 1436
Alignment:
Q  7 agatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctga 75  Q
    ||||| |||||||||||||||||||| || |||| |||||  |||  | |||| |||||||||||||||    
T  1368 agatgattttgagtgcctgaacatgtatattaatgattagacaagtttttagattgagattgaacctga 1436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 20087 - 20158
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||| |||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  20087 ccttagatgcttttgagttcctgaacatgtttaataatgagtaggaaagaatgtagaatgagattgaacctg 20158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 56; Significance: 2e-23; HSPs: 4)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 101854 - 101730
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagactt-agaatgaaaatttagaga 101  Q
    ||||||| |||||||||||||||||||||| ||||||| ||||||||||| || |||||||||||||||||| | |||||| ||||||||  ||| | ||    
T  101854 ccttagaagtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagactttagaatgaa--ttttgtga 101757  T
Q  102 atctgacc-gaactcgccatggcgagc 127  Q
    |  ||||| ||||||||||||||||||    
T  101756 acttgacctgaactcgccatggcgagc 101730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 39986 - 40059
Alignment:
Q  134 gttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    |||||| |||||||| ||||||||||||||||||||||| |   ||||||||||||||| ||||||||||||||    
T  39986 gttacaaaatgccttatttaggttaaatgcgatctttgttgcacgagttgatgtgagttgatcttagaggttag 40059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 206
Target Start/End: Complemental strand, 100687 - 100610
Alignment:
Q  130 ttgtgttacagaatgcctttt-taggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    |||||||||| |||||||| | || ||||||||||||||||||||   |||||||||||| ||  |||||||||||||    
T  100687 ttgtgttacaaaatgccttgtctaagttaaatgcgatctttgtcgcacgagttgatgtgacttgctcttagaggttag 100610  T

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Target: scaffold0023; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 206
Target Start/End: Complemental strand, 101686 - 101629
Alignment:
Q  149 tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||||| |||| ||||||   ||||||||||||||| ||||||||||||||    
T  101686 tttaggttaaatgtgatccttgtcgcacgagttgatgtgagttgatcttagaggttag 101629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 55; Significance: 8e-23; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 802 - 732
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacct 73  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||    
T  802 ccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacct 732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 3928 - 3859
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||| ||||||||| |||||||||| ||||||| ||||||||||||||||| |||||||||||||||    
T  3928 ttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 3859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1257 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold1257
Description:

Target: scaffold1257; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 130 - 206
Target Start/End: Original strand, 2026 - 2103
Alignment:
Q  130 ttgtgttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||||||||||| |||||||||||||||||||||||||   ||||||||||||||| ||||||||||||||    
T  2026 ttgtgttacagaatgccttgtttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggttag 2103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 4801 - 4874
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||  ||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||    
T  4801 aaccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 4874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 722 - 795
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| ||||||||||||||| |||| ||||||| ||||||||||||||||| |||||||||||||||    
T  722 aaccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 13946 - 13873
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| |||||||||||||||||||| ||||||| |||||||||| |||||| |||||||||||||||    
T  13946 aaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaggatgtagcatgagattgaacctg 13873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 54; Significance: 3e-22; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 387 - 318
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaa 70  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||    
T  387 aaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaa 318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 5163 - 5094
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaa 70  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||    
T  5163 aaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaa 5094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 54; Significance: 3e-22; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 11183 - 11256
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||  |||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||    
T  11183 aaccttagattcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 11256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 14101 - 14028
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| ||||||||||||||| |||| ||||||| |||||| |||  | |||| |||||||| |||||    
T  14101 aaccttagatgattttgagtgcctgaatatgtataataatgattaggtaagtttttagattgagattggacctg 14028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 54; Significance: 3e-22; HSPs: 2)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 130 - 206
Target Start/End: Original strand, 28619 - 28696
Alignment:
Q  130 ttgtgttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||||||||||| |||||||||||||||||||||||||   ||||||||||||||| ||||||||||||||    
T  28619 ttgtgttacagaatgccttgtttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggttag 28696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 28470 - 28540
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacct 73  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||| || |||||||||||||||||    
T  28470 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacct 28540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 8198 - 8283
Alignment:
Q  8 gatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaa 92  Q
    |||| |||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| ||||| | ||||||||||    
T  8198 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaa 8283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 54; Significance: 3e-22; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 19726 - 19649
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga 80  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||| || || |||||||||||||||||| |||||    
T  19726 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaggattggagaatgagattgaacctggaaaga 19649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 19573 - 19500
Alignment:
Q  134 gttacagaatgccttt-ttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||| |||  ||| ||||||||||||| ||||||    |||||||||||||| ||||||||||||||    
T  19573 gttacagaatgtcttgcttatgttaaatgcgatccttgtcgcacaagttgatgtgagttgatcttagaggttag 19500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 719 - 791
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacct 73  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||| ||| ||||||||||||||    
T  719 aaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacct 791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 40371 - 40299
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctga 75  Q
    ||||||||| ||||||||||||||||||||||| |||| |||||||| |||||||| ||||||||||||||||    
T  40371 ccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaggaatgtaggatgagattgaacctga 40299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 52; Significance: 5e-21; HSPs: 2)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 3392 - 3321
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||| || ||| ||||||||||||||    
T  3392 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacctg 3321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 173
Target Start/End: Complemental strand, 3239 - 3199
Alignment:
Q  134 gttacagaatgcctt-tttaggttaaatgcgatctttgtcg 173  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  3239 gttacagaatgccttgtttaggttaaatgcgatctttgtcg 3199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 5782 - 5853
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||| ||||| |||||||||||||||    
T  5782 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattgtaggatgagattgaacctg 5853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 52; Significance: 5e-21; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 623 - 694
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||| ||||||| |||||||||||||    
T  623 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattgtagaacgagattgaacctg 694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 8151 - 8221
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaac 71  Q
    |||||| ||||||| |||| ||||||||||||  |||||| |||||| |||  | ||||||||||||||||    
T  8151 aaccttggatgtttatgagggcctgaacatgtacaataatgattaggcaaggttttagaatgagattgaac 8221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 52; Significance: 5e-21; HSPs: 4)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 63021 - 62950
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||||||||||| ||||||||| ||||||| ||||||||||| || ||||||||||||||||||    
T  63021 ccttagatgtttttgagtgcatgaacatgtctaataatgattaggaaagattggagaatgagattgaacctg 62950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 125042 - 124919
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaaatttagaga 101  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| |||||   ||||||| ||||| | |||||||||| ||  | ||    
T  125042 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgag---gaacctggaaagattgtagaatgaaacttgtggga 124946  T
Q  102 atctgacc-gaactcgccatggcgagc 127  Q
     ||||||| |||||||||| |||||||    
T  124945 ttctgacctgaactcgccacggcgagc 124919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 136191 - 136249
Alignment:
Q  145 cctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggt 203  Q
    |||| |||||||||||| || |||||||||  ||||||||||||||| ||||| |||||    
T  136191 ccttgttaggttaaatgtgacctttgtcgtacgagttgatgtgagttgatcttggaggt 136249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 144899 - 144957
Alignment:
Q  145 cctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggt 203  Q
    |||| |||||||||||| || |||||||||  ||||||||||||||| ||||| |||||    
T  144899 ccttgttaggttaaatgtgacctttgtcgtacgagttgatgtgagttgatcttggaggt 144957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 1962 - 2052
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagac-ttagaatgaaa 92  Q
    ||||||||||||||||||  |||||||||| ||||||| ||||||||||| || ||||||||||||||| | ||||||| |||||||||||    
T  1962 ccttagatgtttttgagtcactgaacatgtctaataatgattaggaaagattggagaatgagattgaacataaaaagactttagaatgaaa 2052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 206
Target Start/End: Original strand, 2111 - 2188
Alignment:
Q  130 ttgtgttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||   |||| |||||||||| ||||||||||||||    
T  2111 ttgtgttacagaatgccttgtttaggttaaatgcgatccttgtcgcacgagtggatgtgagttaatcttagaggttag 2188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 50; Significance: 8e-20; HSPs: 2)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 690 - 755
Alignment:
Q  4 cttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattga 69  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||| |||||||||    
T  690 cttagatgtttttgagtgcctgaacatgtataataatgattaggaaagattgtagattgagattga 755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 847 - 920
Alignment:
Q  134 gttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    |||||| |||||||| |||||||||||||||||||||||||    ||||||||| |||| ||||| || |||||    
T  847 gttacataatgccttgtttaggttaaatgcgatctttgtcgcgcaagttgatgttagttgatcttggaagttag 920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 2403 - 2330
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||  ||||||||||||||| ||| |||||||||||||||| |||||||| |||||||||||||||    
T  2403 aaccttagatgcctttgagtgcctgaacgtgtctaataataattaggaaggaatgtaggatgagattgaacctg 2330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 5299 - 5226
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| |||||||||| |||| |||| ||||||| ||||||||||||||||| |||||||||||||||    
T  5299 aaccttagatgcttttgagtgcatgaagatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 5226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 50; Significance: 8e-20; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 45450 - 45539
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagac-ttagaatgaa 91  Q
    ||||||||||||||||||||||||| |||| ||||||| ||||||||||| ||  |||||||||||||||||  ||||| ||||||||||    
T  45450 ccttagatgtttttgagtgcctgaatatgtctaataatgattaggaaagattggggaatgagattgaacctggtaagactttagaatgaa 45539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 45604 - 45677
Alignment:
Q  134 gttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||| ||| |||||| ||||||||||||||||||   ||||||||||||||| ||||||||||||||    
T  45604 gttacagaatgtcttgtttaggataaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggttag 45677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 32515 - 32442
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| |||||||||||||||||||| ||||||| | ||||||||||||| | |||||||||||||||    
T  32515 aaccttagatgcttttgagtgcctgaacatgtctaataatgactaggaaagaatgtgggatgagattgaacctg 32442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 21352 - 21279
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||||||| ||||||||||||||| ||||||| |||| |||||||||||| ||||||||| |||||    
T  21352 aaccttagatgttttttagtgcctgaacatgtctaataatgattatgaaagaatgtaggatgagattgtacctg 21279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 6489 - 6557
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaac 71  Q
    |||||||||  ||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  6489 ccttagatgccttttagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 6557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 2305 - 2376
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||| |||||||||||||||||||||||| ||||||| ||||||||||| || ||| ||||||||||||||    
T  2305 ccttaaatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacctg 2376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 2457 - 2530
Alignment:
Q  134 gttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||||||| |||||| ||||||||||||||||||    |||||||||||||| ||||||||||||||    
T  2457 gttacagaatgccttgtttaggataaatgcgatctttgtcgcacaagttgatgtgagttgatcttagaggttag 2530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 48; Significance: 1e-18; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 16537 - 16470
Alignment:
Q  13 ttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga 80  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||| | ||||||||||||| |||||    
T  16537 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggacgagattgaacctggaaaga 16470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 32618 - 32697
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga 80  Q
    ||||||||||| ||||||||| |||||||||| ||||||| |||||||| || || |||||||||||||||||| |||||    
T  32618 aaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaggactggagaatgagattgaacctgtaaaga 32697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 46387 - 46308
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga 80  Q
    ||||||||||| ||||||||| |||||||||| ||||||| |||||||| || || |||||||||||||||||| |||||    
T  46387 aaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaggactggagaatgagattgaacctgtaaaga 46308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 4985 - 4906
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga 80  Q
    ||||||||||| |||||||||||| ||||||| || |||| | |||| |||| |||||||||||||||||||||||||||    
T  4985 aaccttagatgcttttgagtgcctaaacatgtctattaatgactagggaagattgtagaatgagattgaacctgaaaaga 4906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 23963 - 24034
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||  |||||||||||||||||||| ||||||| ||||||||| ||||||| |||||||||||||||    
T  23963 ccttagattcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctg 24034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 8935 - 8865
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacct 73  Q
    ||||||||| ||||||||||||||| |||| ||||| | ||||||||||||||||| ||||||||||||||    
T  8935 ccttagatgcttttgagtgcctgaatatgtctaatagtgattaggaaagaatgtaggatgagattgaacct 8865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 2464 - 2554
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga-cttagaatgaaa 92  Q
    ||||||||| |||||||| ||||||||||| ||||||| ||||||||||| || |||||||| ||||||||| |||||  |||||||||||    
T  2464 ccttagatgcttttgagtacctgaacatgtctaataatgattaggaaagattggagaatgagtttgaacctgtaaagattttagaatgaaa 2554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 206
Target Start/End: Original strand, 2612 - 2689
Alignment:
Q  130 ttgtgttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||||||||||| ||||||  ||||| |||| ||||||   ||||||||||||||| ||||||||||||||    
T  2612 ttgtgttacagaatgccttgtttaggaaaaatgtgatccttgtcgcacgagttgatgtgagttgatcttagaggttag 2689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 10987 - 10917
Alignment:
Q  4 cttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||   |||| ||||||||||||||    
T  10987 cttagatgtttttgagtgcctgaacatgtgtaataatgattaggaaagatcctagactgagattgaacctg 10917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 203
Target Start/End: Complemental strand, 10828 - 10766
Alignment:
Q  141 aatgcctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggt 203  Q
    |||||||| |||||||||||||||||| |||||   ||||||||||||||| |||||||||||    
T  10828 aatgccttgttaggttaaatgcgatctctgtcgcacgagttgatgtgagttgatcttagaggt 10766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1765 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold1765
Description:

Target: scaffold1765; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 1390 - 1321
Alignment:
Q  134 gttacagaatgcctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggt 203  Q
    ||||||||||||||| |||||||||||||||||||||||    ||||||||||||||| |||||||||||    
T  1390 gttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatcttagaggt 1321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 1365 - 1292
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||  |||||||||||||||||   ||||||| ||||||||||||||||| |||||||||||||||    
T  1365 aaccttagatgcctttgagtgcctgaacattactaataatgattaggaaagaatgtaggatgagattgaacctg 1292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 206
Target Start/End: Complemental strand, 13079 - 13002
Alignment:
Q  130 ttgtgttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    |||||||||| |||||||| |||||||||||||| ||||||||||   ||||||||||||||| ||||||||||||||    
T  13079 ttgtgttacaaaatgccttgtttaggttaaatgcaatctttgtcgcacgagttgatgtgagttgatcttagaggttag 13002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 13301 - 13233
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacct 73  Q
    |||| ||||| ||||||||||||||||| | ||||| |||||| |||  | |||| |||||||||||||    
T  13301 ttagttgtttatgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacct 13233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 9536 - 9459
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga 80  Q
    ||||||||| ||||||||||||||||| || ||||||  |||||||||||||||||| |||||||| ||||| |||||    
T  9536 ccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaaga 9459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 135 - 205
Target Start/End: Complemental strand, 9382 - 9312
Alignment:
Q  135 ttacagaatgcctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggtta 205  Q
    ||||||||||||||  |||||||||||||||| ||||||   |||||| |||||||| |||||||| ||||    
T  9382 ttacagaatgccttgctaggttaaatgcgatccttgtcgcacgagttgttgtgagttgatcttagatgtta 9312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 7061 - 6988
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||  ||||||||||||||| ||| ||||||| |||||||| |||||||| |||||||||||||||    
T  7061 aaccttagatgcctttgagtgcctgaacgtgtctaataattattaggaaggaatgtaggatgagattgaacctg 6988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 23342 - 23277
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattg 68  Q
    |||||||||  ||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  23342 ccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattg 23277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 46; Significance: 2e-17; HSPs: 3)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 3932 - 3859
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||  ||||||||||||||||||  || |||| ||||||||||||||||| |||||||||||||||    
T  3932 aaccttagatgactttgagtgcctgaacatgactagtaatgattaggaaagaatgtaggatgagattgaacctg 3859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 7996 - 7923
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||  ||||||||||||||||||  || |||| ||||||||||||||||| |||||||||||||||    
T  7996 aaccttagatgactttgagtgcctgaacatgactagtaatgattaggaaagaatgtaggatgagattgaacctg 7923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 27305 - 27374
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||| |||||||||||||||||||| ||||||| |||||| |||  | |||  ||||||||||||||    
T  27305 ttagatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagtttgagattgaacctg 27374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 13402 - 13329
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||||||||||||||||||||||| |||| || ||||||||||| || ||| | ||||||||||||    
T  13402 aaccttagatgtttttgagtgcctgaacatgtctaattatgattaggaaagattggagattaagattgaacctg 13329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 191
Target Start/End: Complemental strand, 13247 - 13190
Alignment:
Q  134 gttacagaatgcctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtt 191  Q
    ||||||||||||||| |||||||||||| ||||||||||    |||||||||||||||    
T  13247 gttacagaatgccttgttaggttaaatgtgatctttgtcacacgagttgatgtgagtt 13190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 43443 - 43516
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||||||||||||||||||||||| |||| || ||||| ||||| | |||| ||||||||||||||    
T  43443 aaccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaagattctagattgagattgaacctg 43516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 47363 - 47436
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||||||||||||||||||||||| |||| || ||||| ||||| | |||| ||||||||||||||    
T  47363 aaccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaagattctagattgagattgaacctg 47436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 15135 - 15208
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||| |||||| |||||||||||| || |||| ||||||| ||||||||||||||||| |||||||||||||||    
T  15135 aaccgtagatgcttttgagtgccttaatatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 15208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 47437 - 47364
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| ||||||||| ||||| |||| ||||||| |||||||| |||||||| |||||||||||||||    
T  47437 aaccttagatgcttttgagtgtctgaatatgtctaataatgattaggaatgaatgtaggatgagattgaacctg 47364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 15489 - 15562
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||||||||||||||| ||||||| |||| || ||||||||||| | |||| ||||||||||||||    
T  15489 aaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattgagattgaacctg 15562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 15644 - 15717
Alignment:
Q  134 gttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||||||| |||| |||||||| |||||||||||   ||||||||||||||| ||||| ||| ||||    
T  15644 gttacagaatgccttgtttatgttaaatgtgatctttgtcgcacgagttgatgtgagttgatcttggagattag 15717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 45; Significance: 8e-17; HSPs: 2)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 7716 - 7788
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacct 73  Q
    ||||||||||||||||||||| |||||||||| ||||||| |||||||||||   |||| |||||||||||||    
T  7716 aaccttagatgtttttgagtgtctgaacatgtgtaataatgattaggaaagatcctagactgagattgaacct 7788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 203
Target Start/End: Original strand, 7870 - 7940
Alignment:
Q  133 tgttacagaatgcctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggt 203  Q
    |||| |||||||||||  |||||||||||||||||||||||   || |||||||||||| |||||||||||    
T  7870 tgttccagaatgccttgctaggttaaatgcgatctttgtcgcaagaattgatgtgagttgatcttagaggt 7940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 45; Significance: 8e-17; HSPs: 2)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 6053 - 5985
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaac 71  Q
    ||||||||||||||||||||||||||| || ||||||| ||||||||||| || ||| |||||||||||    
T  6053 ccttagatgtttttgagtgcctgaacaggtctaataatgattaggaaagattggagattgagattgaac 5985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 205
Target Start/End: Complemental strand, 5951 - 5879
Alignment:
Q  134 gttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggtta 205  Q
    ||||||||||||||| |||||| |||||| |||  ||||||    |||||||||||||| |||||||||||||    
T  5951 gttacagaatgccttatttaggctaaatgtgattcttgtcgcacaagttgatgtgagttgatcttagaggtta 5879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 45; Significance: 8e-17; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 5784 - 5852
Alignment:
Q  4 cttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacc 72  Q
    ||||||||||||||||| ||||||||||| ||||||| ||||||||| | |||||| ||||||||||||    
T  5784 cttagatgtttttgagtacctgaacatgtataataatgattaggaaaaattgtagattgagattgaacc 5852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 205
Target Start/End: Original strand, 5935 - 6007
Alignment:
Q  134 gttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggtta 205  Q
    |||||| |||||||| |||||||||||||||||||||||||    ||||||||| |||| ||||| |||||||    
T  5935 gttacataatgccttgtttaggttaaatgcgatctttgtcgcgcaagttgatgttagttgatcttggaggtta 6007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 10604 - 10540
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagatt 67  Q
    ||||||||| |||||||||| ||||||||| ||||||| ||||||||||||||||| ||||||||    
T  10604 ccttagatgcttttgagtgcatgaacatgtctaataatgattaggaaagaatgtaggatgagatt 10540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 13660 - 13589
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||| ||| ||||||||||||||| |||| ||||||| ||||||||||||||||| |||||| ||||||||    
T  13660 ccttatatgcttttgagtgcctgaaaatgtctaataatgattaggaaagaatgtaggatgagactgaacctg 13589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 2315 - 2245
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaac 71  Q
    ||||||||||||||||||||||||||| |||   | |||| ||||||||||| ||||||||||||||||||    
T  2315 aaccttagatgtttttgagtgcctgaagatgcacactaatgattaggaaagattgtagaatgagattgaac 2245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 10227 - 10289
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatga 63  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||| ||||| | ||||||||    
T  10227 aaccttagatgtttttgagtgcctgaacatgtctaataatgattagtaaagattttagaatga 10289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 133 - 206
Target Start/End: Original strand, 10353 - 10426
Alignment:
Q  133 tgttacagaatgcctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||| | |||||| |||||||||||||||||||||| |   ||||||||||||||| ||||||||||||||    
T  10353 tgttacatactgccttgttaggttaaatgcgatctttgttgcacgagttgatgtgagttgatcttagaggttag 10426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #3
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 1041 - 950
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaa 92  Q
    |||||||||||| |||||||||  |||||||| ||||| | |||||||  |||||||  ||||||| | ||||| |||||||||||||||||    
T  1041 aaccttagatgtctttgagtgctagaacatgtctaatattgattaggagtgaatgtaagatgagataggacctggaaagacttagaatgaaa 950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 339612 - 339737
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaaatttagaga 101  Q
    ||||| ||| |||||||||||||||  ||| ||||||| |||||||| |||||||| ||||||||||||||| ||||| | ||||||| || ||| | ||    
T  339612 ccttaaatgcttttgagtgcctgaatttgtctaataatgattaggaatgaatgtaggatgagattgaacctggaaagattgtagaatg-aacttttggga 339710  T
Q  102 atctgac-cgaactcgccatggcgagc 127  Q
    |||||||  |||||||||| |||||||    
T  339711 atctgacatgaactcgccacggcgagc 339737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 437 - 364
Alignment:
Q  134 gttacagaatgccttt-ttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||| |||  ||| |||||||||||||||||||||  ||||||||||||||| ||||||||||||||    
T  437 gttacagaatgtcttgcttatgttaaatgcgatctttgtcgtacgagttgatgtgagttgatcttagaggttag 364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 590 - 513
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctgaaaaga 80  Q
    |||||||  ||||||||||||| ||||||| ||||||| ||||||||||| || ||||||||||||||| || |||||    
T  590 ccttagacttttttgagtgcctaaacatgtctaataatgattaggaaagattggagaatgagattgaacttggaaaga 513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 3)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 6987 - 6926
Alignment:
Q  13 ttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||||| |||||| ||||||||||||||||||| || ||| ||||||||||||||    
T  6987 ttttgagtgcctggacatgtctaataataattaggaaagattggagattgagattgaacctg 6926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 205
Target Start/End: Complemental strand, 6843 - 6771
Alignment:
Q  134 gttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggtta 205  Q
    |||||| |||||||| |||||| ||||||||||||||||||    |||||||||||||| |||||||||||||    
T  6843 gttacaaaatgccttgtttaggataaatgcgatctttgtcgcacaagttgatgtgagttgatcttagaggtta 6771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 137 - 203
Target Start/End: Complemental strand, 8774 - 8708
Alignment:
Q  137 acagaatgcctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggt 203  Q
    |||||||||||| |||||||||||| || ||||||||   |||||||||||| || |||||||||||    
T  8774 acagaatgccttgttaggttaaatgtgacctttgtcgcacgagttgatgtgaattgatcttagaggt 8708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 4)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 7075 - 7002
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||||||||||||||| ||||||| |||| || ||||||||||| | |||| | ||||||||||||    
T  7075 aaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattaagattgaacctg 7002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 14455 - 14382
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||||||||||||||| ||||||| |||| || ||||||||||| | |||| | ||||||||||||    
T  14455 aaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattaagattgaacctg 14382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 191
Target Start/End: Complemental strand, 6904 - 6862
Alignment:
Q  149 tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtt 191  Q
    |||||||||||||||||||||||||   |||||||||||||||    
T  6904 tttaggttaaatgcgatctttgtcgcacgagttgatgtgagtt 6862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 191
Target Start/End: Complemental strand, 14284 - 14242
Alignment:
Q  149 tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtt 191  Q
    |||||||||||||||||||||||||   |||||||||||||||    
T  14284 tttaggttaaatgcgatctttgtcgcacgagttgatgtgagtt 14242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 12453 - 12384
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||| ||||||||| |||||||||| ||||||| ||||||||||| | |||| ||||||||||||||    
T  12453 ttagatgattttgagtgtctgaacatgtataataatgattaggaaagattttagattgagattgaacctg 12384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 52030 - 51957
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||| ||||  |||||||||||||||| || ||||||| ||||||||||||||||| | |||||||||||||    
T  52030 aacctttgatgcctttgagtgcctgaacaagtctaataatgattaggaaagaatgtaggacgagattgaacctg 51957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 130214 - 130141
Alignment:
Q  134 gttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    |||||| |||||||| |||||| ||||||||||||||||||   ||||||||||||||| ||||||||||||||    
T  130214 gttacaaaatgccttgtttaggataaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggttag 130141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 130367 - 130296
Alignment:
Q  3 ccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||| ||||||||||||||||||||||||| || | || ||||| ||||| | |||| ||||||||||||||    
T  130367 cctttgatgtttttgagtgcctgaacatgtctagttatgattagaaaagattctagattgagattgaacctg 130296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 60301 - 60367
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaac 71  Q
    ||||||| || ||||||||||||||||| ||||||| |||||| |||  | |||| |||||||||||    
T  60301 ttagatgattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaac 60367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 80796 - 80727
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||| |||||||||||||||||||| ||||||| |||||| |||  | |||| ||||||||||||||    
T  80796 ttagatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctg 80727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 227942 - 227881
Alignment:
Q  13 ttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||||||| ||||||| ||||||| ||||||||||| | |||| ||||||||||||||    
T  227942 ttttgagtgcctaaacatgtataataatgattaggaaagattctagattgagattgaacctg 227881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 14509 - 14582
Alignment:
Q  134 gttacagaatgcctt-tttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggttag 206  Q
    ||||||||||||||| |||||| ||||||||||||| ||||    |||||||||||||| ||||||||||||||    
T  14509 gttacagaatgccttgtttaggataaatgcgatcttggtcgcacaagttgatgtgagttgatcttagaggttag 14582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 103242 - 103315
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||| | || ||||||||||||||||| ||||||| |||||| |||  | |||| ||||||||||||||    
T  103242 aaccttagaggattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctg 103315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 103452 - 103520
Alignment:
Q  135 ttacagaatgcctttttaggttaaatgcgatctttgtcgtttgagttgatgtgagtttatcttagaggt 203  Q
    ||||||||  |||| |||||||||||| || |||||||||  ||||||||||||||| ||||| |||||    
T  103452 ttacagaacaccttgttaggttaaatgtgacctttgtcgtacgagttgatgtgagttgatcttggaggt 103520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 10931 - 10970
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataat 40  Q
    ||||||||||| |||||||||||||||||||| |||||||    
T  10931 aaccttagatgcttttgagtgcctgaacatgtctaataat 10970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 18113 - 18156
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataatt 44  Q
    |||||||||||||||||||||||| || ||||||| ||||||||    
T  18113 aaccttagatgtttttgagtgcctaaagatgtttattaataatt 18156  T

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Target: scaffold0357 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 3232 - 3162
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaac 71  Q
    ||||||||||| ||||||||||||||| ||||  |||||| |||||| |||  | |||| |||||||||||    
T  3232 aaccttagatgattttgagtgcctgaatatgtacaataatgattaggcaagtttttagattgagattgaac 3162  T

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Target: scaffold0357; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 13665 - 13596
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||| || | ||||||||||||||| ||||||| |||||| |||  | |||| ||||||||||||||    
T  13665 ttagatgattctaagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctg 13596  T

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Target: scaffold0123 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 25640 - 25574
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaac 71  Q
    ||||||| ||||||||||||||| |||| ||||||| |||||| |||  | |||| |||||||||||    
T  25640 ttagatgattttgagtgcctgaaaatgtataataatgattaggcaagtttttagattgagattgaac 25574  T

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Target: scaffold0076 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 24182 - 24252
Alignment:
Q  4 cttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    |||||||| ||||||||||||||| || | ||||||| |||||| |||  | |||| ||||||||||||||    
T  24182 cttagatgattttgagtgcctgaatatatataataatgattaggcaagcttttagattgagattgaacctg 24252  T

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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 332850 - 332784
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaac 71  Q
    ||||||| ||||||||||||||| |||| ||| ||| ||||||||||  | |||| |||||||||||    
T  332850 ttagatgattttgagtgcctgaatatgtataagaatgattaggaaagtttttagattgagattgaac 332784  T

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Target: scaffold0601 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 7188 - 7119
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||| ||||||||| ||||| |||| ||||||| |||||| |||  | |||| ||||||||||||||    
T  7188 ttagatgattttgagtgactgaatatgtataataatgattaggcaagtttttagattgagattgaacctg 7119  T

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Target: scaffold0139 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 38835 - 38762
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| || ||||||| |||| |||| ||||||| |||||| |||  | |||| ||||||||||||||    
T  38835 aaccttagatgattctgagtgcgtgaatatgtataataatgattaggcaagtttttagattgagattgaacctg 38762  T

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Target: scaffold0098 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 29223 - 29150
Alignment:
Q  1 aaccttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||||||| ||||||||||||||| || | ||||||| |||||| |||  | |||| |||||||| |||||    
T  29223 aaccttagatgattttgagtgcctgaatatatataataatgattaggcaagtttttagattgagattggacctg 29150  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 268186 - 268117
Alignment:
Q  5 ttagatgtttttgagtgcctgaacatgtttaataataattaggaaagaatgtagaatgagattgaacctg 74  Q
    ||||||| || | ||||||||||||||| ||||||| |||||| |||  | |||| ||||||||||||||    
T  268186 ttagatgattctaagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctg 268117  T

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