View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18962_low_14 (Length: 230)

Name: NF18962_low_14
Description: NF18962
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18962_low_14
NF18962_low_14
[»] chr6 (44 HSPs)
chr6 (1-230)||(22831727-22831956)
chr6 (2-230)||(16920300-16920528)
chr6 (2-230)||(11185728-11185956)
chr6 (1-230)||(18821486-18821715)
chr6 (22-230)||(20637950-20638158)
chr6 (2-230)||(20360627-20360855)
chr6 (2-230)||(22779883-22780122)
chr6 (2-230)||(18409483-18409722)
chr6 (42-230)||(19303197-19303396)
chr6 (42-230)||(20594039-20594238)
chr6 (40-230)||(29060804-29061005)
chr6 (2-131)||(25629120-25629250)
chr6 (2-230)||(17287452-17287691)
chr6 (89-230)||(29808539-29808691)
chr6 (89-230)||(28496129-28496280)
chr6 (151-230)||(1561689-1561768)
chr6 (22-230)||(18456961-18457179)
chr6 (90-139)||(25611481-25611530)
chr6 (90-230)||(15894086-15894237)
chr6 (90-129)||(21939699-21939738)
chr6 (151-230)||(21939769-21939848)
chr6 (90-132)||(4185587-4185629)
chr6 (90-132)||(4667977-4668019)
chr6 (90-128)||(25641953-25641991)
chr6 (90-131)||(22080502-22080543)
chr6 (182-230)||(22334538-22334586)
chr6 (91-131)||(27333049-27333089)
chr6 (91-131)||(27393789-27393829)
chr6 (90-125)||(8244158-8244193)
chr6 (90-125)||(11567160-11567195)
chr6 (92-131)||(19652512-19652551)
chr6 (90-125)||(19870888-19870923)
chr6 (90-141)||(22334648-22334699)
chr6 (90-125)||(22863243-22863278)
chr6 (90-125)||(23395366-23395401)
chr6 (90-132)||(31155162-31155204)
chr6 (94-139)||(25603143-25603188)
chr6 (90-130)||(16924647-16924687)
chr6 (90-130)||(16929362-16929402)
chr6 (90-130)||(19668688-19668728)
chr6 (182-230)||(22080393-22080441)
chr6 (150-230)||(23019792-23019872)
chr6 (90-130)||(23657189-23657229)
chr6 (182-230)||(25611379-25611427)
[»] scaffold0456 (1 HSPs)
scaffold0456 (2-230)||(10093-10321)
[»] chr3 (59 HSPs)
chr3 (2-230)||(20698103-20698331)
chr3 (23-230)||(26687134-26687352)
chr3 (2-223)||(40213384-40213616)
chr3 (2-230)||(30030065-30030293)
chr3 (2-225)||(17488082-17488317)
chr3 (22-216)||(13442520-13442725)
chr3 (40-230)||(12399473-12399660)
chr3 (2-225)||(17499564-17499799)
chr3 (2-230)||(18438760-18438999)
chr3 (2-230)||(14572814-14573053)
chr3 (5-131)||(14576598-14576725)
chr3 (22-131)||(25476150-25476260)
chr3 (2-230)||(11424419-11424658)
chr3 (22-230)||(17247942-17248161)
chr3 (54-137)||(14973132-14973216)
chr3 (47-137)||(43841203-43841293)
chr3 (2-126)||(23083132-23083256)
chr3 (100-230)||(16809724-16809850)
chr3 (2-104)||(16796773-16796875)
chr3 (90-230)||(12340068-12340217)
chr3 (154-230)||(4588471-4588547)
chr3 (13-230)||(53070355-53070582)
chr3 (89-132)||(1644446-1644489)
chr3 (151-230)||(14179708-14179787)
chr3 (89-132)||(32307983-32308026)
chr3 (89-132)||(49667847-49667890)
chr3 (89-132)||(12934074-12934117)
chr3 (151-230)||(13209984-13210062)
chr3 (151-230)||(14665991-14666070)
chr3 (151-230)||(14669146-14669225)
chr3 (151-230)||(14735504-14735583)
chr3 (154-230)||(9513299-9513375)
chr3 (154-230)||(9521274-9521350)
chr3 (151-223)||(12852027-12852099)
chr3 (90-125)||(7109999-7110034)
chr3 (90-125)||(7113934-7113969)
chr3 (90-129)||(12852130-12852169)
chr3 (151-230)||(12933966-12934045)
chr3 (90-129)||(14665921-14665960)
chr3 (90-129)||(14669076-14669115)
chr3 (90-129)||(14735434-14735473)
chr3 (90-141)||(19725669-19725720)
chr3 (90-125)||(22321965-22322000)
chr3 (90-125)||(22337020-22337055)
chr3 (90-125)||(27409417-27409452)
chr3 (159-230)||(43842572-43842643)
chr3 (93-132)||(49389407-49389446)
chr3 (89-131)||(324549-324591)
chr3 (94-132)||(9513228-9513266)
chr3 (94-132)||(9521203-9521241)
chr3 (156-230)||(14973245-14973319)
chr3 (89-131)||(42386725-42386767)
chr3 (90-131)||(1465174-1465215)
chr3 (91-132)||(12171868-12171909)
chr3 (90-127)||(13210096-13210133)
chr3 (90-131)||(16097645-16097686)
chr3 (89-130)||(37250932-37250973)
chr3 (182-230)||(2050857-2050905)
chr3 (90-130)||(22110116-22110156)
[»] scaffold0351 (1 HSPs)
scaffold0351 (2-230)||(16505-16733)
[»] chr7 (43 HSPs)
chr7 (2-230)||(27847500-27847728)
chr7 (2-230)||(40443615-40443842)
chr7 (2-230)||(16385914-16386142)
chr7 (2-230)||(9509415-9509654)
chr7 (2-230)||(26212222-26212450)
chr7 (5-230)||(12699061-12699297)
chr7 (2-230)||(38227706-38227945)
chr7 (2-124)||(10589264-10589386)
chr7 (2-224)||(3564026-3564259)
chr7 (40-226)||(15143697-15143894)
chr7 (13-230)||(17061616-17061844)
chr7 (155-230)||(2831962-2832037)
chr7 (151-230)||(9751206-9751285)
chr7 (151-230)||(39267302-39267381)
chr7 (86-141)||(44116816-44116871)
chr7 (151-230)||(15754543-15754622)
chr7 (151-230)||(18302564-18302643)
chr7 (154-230)||(28504957-28505033)
chr7 (154-230)||(34201172-34201248)
chr7 (90-129)||(18302494-18302533)
chr7 (89-131)||(810894-810936)
chr7 (24-131)||(12255556-12255664)
chr7 (152-230)||(12756373-12756451)
chr7 (13-131)||(12756481-12756600)
chr7 (90-127)||(28505069-28505106)
chr7 (90-129)||(2832071-2832110)
chr7 (90-129)||(9389462-9389501)
chr7 (90-129)||(9751316-9751355)
chr7 (90-129)||(11995796-11995835)
chr7 (90-125)||(12718966-12719001)
chr7 (90-125)||(12723877-12723912)
chr7 (90-125)||(16906974-16907009)
chr7 (90-125)||(18279701-18279736)
chr7 (90-125)||(18283664-18283699)
chr7 (90-129)||(34201099-34201138)
chr7 (94-129)||(39267412-39267447)
chr7 (90-128)||(68061-68099)
chr7 (89-131)||(16056642-16056684)
chr7 (89-131)||(22073230-22073272)
chr7 (90-131)||(44014489-44014530)
chr7 (182-230)||(11995714-11995762)
chr7 (150-230)||(16219372-16219452)
chr7 (182-230)||(47832225-47832273)
[»] scaffold1842 (1 HSPs)
scaffold1842 (2-230)||(716-944)
[»] scaffold0598 (1 HSPs)
scaffold0598 (6-230)||(719-943)
[»] scaffold0106 (2 HSPs)
scaffold0106 (2-230)||(1512-1740)
scaffold0106 (2-230)||(7489-7717)
[»] scaffold0011 (2 HSPs)
scaffold0011 (2-230)||(167646-167874)
scaffold0011 (2-230)||(52139-52377)
[»] chr4 (49 HSPs)
chr4 (2-230)||(14052969-14053197)
chr4 (13-227)||(3096880-3097094)
chr4 (2-230)||(7089103-7089331)
chr4 (2-230)||(12902983-12903210)
chr4 (2-230)||(17047740-17047967)
chr4 (2-230)||(44053055-44053294)
chr4 (2-230)||(22636660-22636899)
chr4 (2-131)||(23374125-23374254)
chr4 (42-223)||(15091162-15091355)
chr4 (40-230)||(16377178-16377379)
chr4 (2-141)||(7893926-7894066)
chr4 (47-137)||(7798968-7799058)
chr4 (42-230)||(14038914-14039114)
chr4 (22-141)||(44928678-44928798)
chr4 (2-102)||(16239764-16239865)
chr4 (22-230)||(44102456-44102674)
chr4 (1-96)||(6190687-6190782)
chr4 (151-230)||(13812465-13812544)
chr4 (151-230)||(16597031-16597110)
chr4 (151-225)||(20156951-20157025)
chr4 (89-132)||(12774313-12774356)
chr4 (151-230)||(15552199-15552278)
chr4 (151-230)||(22633869-22633948)
chr4 (151-230)||(24029127-24029206)
chr4 (23-131)||(52242958-52243067)
chr4 (90-129)||(3332201-3332240)
chr4 (151-230)||(6190819-6190898)
chr4 (90-129)||(24029057-24029096)
chr4 (89-131)||(21815396-21815438)
chr4 (90-128)||(22633980-22634018)
chr4 (90-131)||(15099665-15099706)
chr4 (90-127)||(15552129-15552166)
chr4 (90-126)||(13812578-13812614)
chr4 (42-131)||(15464694-15464785)
chr4 (90-125)||(4561107-4561142)
chr4 (90-125)||(5756711-5756746)
chr4 (151-230)||(7799083-7799162)
chr4 (151-225)||(16239653-16239728)
chr4 (90-129)||(20157056-20157095)
chr4 (89-128)||(21815070-21815109)
chr4 (89-128)||(21818492-21818531)
chr4 (90-125)||(33742675-33742710)
chr4 (152-230)||(21814959-21815037)
chr4 (152-230)||(21818381-21818459)
chr4 (90-131)||(8846689-8846730)
chr4 (182-230)||(13844956-13845004)
chr4 (182-230)||(21815288-21815336)
chr4 (182-230)||(39705944-39705992)
chr4 (91-131)||(39706052-39706092)
[»] chr2 (30 HSPs)
chr2 (2-230)||(20309331-20309559)
chr2 (2-228)||(37785-38011)
chr2 (2-230)||(23286087-23286315)
chr2 (2-230)||(23654066-23654281)
chr2 (2-230)||(298471-298709)
chr2 (1-230)||(32451585-32451825)
chr2 (2-230)||(27753801-27754040)
chr2 (2-230)||(22737836-22738075)
chr2 (23-230)||(23076689-23076905)
chr2 (2-230)||(22337341-22337580)
chr2 (40-230)||(22730889-22731090)
chr2 (2-230)||(23660248-23660487)
chr2 (154-230)||(23071619-23071695)
chr2 (22-131)||(23708383-23708493)
chr2 (91-129)||(22133982-22134020)
chr2 (90-128)||(22740730-22740768)
chr2 (90-127)||(23071731-23071768)
chr2 (90-125)||(12901286-12901321)
chr2 (90-125)||(24628252-24628287)
chr2 (90-125)||(24649654-24649689)
chr2 (90-125)||(27379206-27379241)
chr2 (90-125)||(27383252-27383287)
chr2 (90-125)||(27602094-27602129)
chr2 (93-132)||(28406297-28406336)
chr2 (90-125)||(41530783-41530818)
chr2 (161-230)||(28291958-28292027)
chr2 (182-230)||(19672319-19672367)
chr2 (182-230)||(22133873-22133921)
chr2 (91-131)||(25176158-25176198)
chr2 (90-126)||(31756232-31756268)
[»] chr8 (37 HSPs)
chr8 (2-230)||(16199314-16199541)
chr8 (2-230)||(21918666-21918895)
chr8 (2-230)||(31971481-31971709)
chr8 (2-230)||(25362807-25363035)
chr8 (2-230)||(20536434-20536673)
chr8 (22-230)||(18878893-18879112)
chr8 (2-230)||(18818066-18818304)
chr8 (2-230)||(21923584-21923823)
chr8 (2-230)||(45130687-45130893)
chr8 (23-230)||(23406628-23406846)
chr8 (2-230)||(22626961-22627200)
chr8 (2-230)||(28648700-28648939)
chr8 (42-230)||(6759522-6759722)
chr8 (13-230)||(41598421-41598649)
chr8 (4-230)||(23648781-23649018)
chr8 (54-230)||(16091997-16092184)
chr8 (13-225)||(22875302-22875525)
chr8 (151-230)||(21255605-21255684)
chr8 (154-230)||(5865933-5866009)
chr8 (154-230)||(17141302-17141378)
chr8 (23-94)||(7373017-7373088)
chr8 (151-230)||(7373135-7373214)
chr8 (151-230)||(21249767-21249846)
chr8 (155-230)||(21491382-21491457)
chr8 (90-127)||(5866045-5866082)
chr8 (90-127)||(17141229-17141266)
chr8 (90-127)||(21249697-21249734)
chr8 (90-131)||(39834147-39834188)
chr8 (90-125)||(43252110-43252145)
chr8 (90-127)||(21255535-21255572)
chr8 (190-230)||(6520793-6520833)
chr8 (91-131)||(21674021-21674061)
chr8 (90-130)||(21972353-21972393)
chr8 (90-130)||(21976438-21976478)
chr8 (90-130)||(37116664-37116704)
chr8 (182-230)||(38854907-38854955)
chr8 (91-131)||(38855015-38855055)
[»] chr5 (41 HSPs)
chr5 (2-230)||(21292637-21292865)
chr5 (2-230)||(8286509-8286737)
chr5 (2-230)||(22107040-22107268)
chr5 (2-230)||(22075245-22075473)
chr5 (2-230)||(13095720-13095959)
chr5 (1-230)||(21985803-21986043)
chr5 (2-141)||(13025536-13025676)
chr5 (2-230)||(23390152-23390391)
chr5 (13-230)||(24529457-24529686)
chr5 (2-202)||(24493794-24494005)
chr5 (2-128)||(25421758-25421885)
chr5 (42-137)||(9078218-9078314)
chr5 (42-230)||(1096733-1096932)
chr5 (13-230)||(36154484-36154712)
chr5 (22-230)||(25431640-25431859)
chr5 (13-131)||(11581010-11581129)
chr5 (151-230)||(22119849-22119928)
chr5 (22-131)||(22144296-22144406)
chr5 (151-230)||(24766993-24767072)
chr5 (90-230)||(19660493-19660643)
chr5 (151-230)||(21871227-21871306)
chr5 (151-230)||(21875507-21875586)
chr5 (90-129)||(22119959-22119998)
chr5 (90-132)||(22959297-22959339)
chr5 (90-131)||(5888940-5888981)
chr5 (94-131)||(21565863-21565900)
chr5 (90-191)||(16674449-16674551)
chr5 (89-129)||(20026706-20026746)
chr5 (90-125)||(19472493-19472528)
chr5 (90-125)||(20296145-20296180)
chr5 (90-129)||(24767103-24767142)
chr5 (151-230)||(25421918-25421997)
chr5 (90-129)||(31342414-31342453)
chr5 (152-230)||(11580901-11580979)
chr5 (89-131)||(21501919-21501961)
chr5 (90-128)||(25744036-25744074)
chr5 (94-131)||(21741308-21741345)
chr5 (90-130)||(123074-123114)
chr5 (151-219)||(9078338-9078406)
chr5 (182-230)||(19669317-19669365)
chr5 (90-130)||(23201680-23201720)
[»] scaffold0032 (1 HSPs)
scaffold0032 (2-227)||(51805-52030)
[»] scaffold0718 (1 HSPs)
scaffold0718 (5-230)||(4798-5023)
[»] scaffold0490 (1 HSPs)
scaffold0490 (2-230)||(2178-2406)
[»] scaffold0427 (1 HSPs)
scaffold0427 (2-230)||(13721-13949)
[»] scaffold0114 (1 HSPs)
scaffold0114 (2-230)||(15132-15360)
[»] scaffold0113 (1 HSPs)
scaffold0113 (2-230)||(32290-32518)
[»] scaffold0235 (1 HSPs)
scaffold0235 (2-230)||(11180-11408)
[»] scaffold0064 (1 HSPs)
scaffold0064 (2-230)||(47212-47440)
[»] chr1 (31 HSPs)
chr1 (2-230)||(38801058-38801286)
chr1 (2-230)||(21026906-21027134)
chr1 (2-230)||(22355841-22356069)
chr1 (2-230)||(22357527-22357755)
chr1 (13-230)||(27250396-27250613)
chr1 (2-230)||(20846886-20847114)
chr1 (2-224)||(50209875-50210108)
chr1 (2-230)||(22354228-22354467)
chr1 (22-230)||(22532515-22532734)
chr1 (2-224)||(34510006-34510239)
chr1 (13-230)||(433244-433472)
chr1 (4-225)||(20135415-20135647)
chr1 (89-132)||(21754350-21754393)
chr1 (91-131)||(33681325-33681365)
chr1 (90-129)||(20918917-20918956)
chr1 (90-132)||(21162080-21162122)
chr1 (90-131)||(20637165-20637206)
chr1 (154-230)||(20918990-20919066)
chr1 (90-125)||(16375231-16375266)
chr1 (90-141)||(20091230-20091281)
chr1 (90-125)||(21407653-21407688)
chr1 (90-125)||(52639839-52639874)
chr1 (90-132)||(20248592-20248634)
chr1 (91-128)||(22921635-22921672)
chr1 (89-130)||(26065254-26065295)
chr1 (90-131)||(28194213-28194254)
chr1 (90-131)||(35981451-35981492)
chr1 (182-230)||(21301194-21301242)
chr1 (182-230)||(22921523-22921571)
chr1 (90-130)||(45310135-45310175)
chr1 (91-131)||(52927746-52927786)
[»] scaffold0309 (1 HSPs)
scaffold0309 (5-230)||(6839-7064)
[»] scaffold0358 (2 HSPs)
scaffold0358 (2-230)||(161-390)
scaffold0358 (2-230)||(4937-5166)
[»] scaffold0193 (1 HSPs)
scaffold0193 (2-230)||(13437-13665)
[»] scaffold0165 (2 HSPs)
scaffold0165 (2-230)||(3707-3935)
scaffold0165 (2-230)||(7771-7999)
[»] scaffold0305 (1 HSPs)
scaffold0305 (22-230)||(20649-20868)
[»] scaffold0484 (1 HSPs)
scaffold0484 (2-230)||(1140-1368)
[»] scaffold0403 (1 HSPs)
scaffold0403 (40-230)||(5113-5302)
[»] scaffold0034 (2 HSPs)
scaffold0034 (1-230)||(51540-51780)
scaffold0034 (40-131)||(32799-32892)
[»] scaffold0292 (2 HSPs)
scaffold0292 (2-223)||(3696-3928)
scaffold0292 (2-230)||(568-807)
[»] scaffold0145 (1 HSPs)
scaffold0145 (2-230)||(38986-39224)
[»] scaffold0042 (1 HSPs)
scaffold0042 (2-230)||(23958-24196)
[»] scaffold0021 (3 HSPs)
scaffold0021 (2-230)||(124811-125047)
scaffold0021 (89-130)||(136132-136173)
scaffold0021 (89-130)||(144840-144881)
[»] scaffold0175 (3 HSPs)
scaffold0175 (23-230)||(13339-13557)
scaffold0175 (154-230)||(34509-34585)
scaffold0175 (91-127)||(34437-34473)
[»] scaffold0088 (1 HSPs)
scaffold0088 (2-230)||(21137-21355)
[»] scaffold0016 (3 HSPs)
scaffold0016 (2-230)||(2077-2316)
scaffold0016 (151-230)||(207175-207254)
scaffold0016 (90-129)||(207285-207324)
[»] scaffold0056 (2 HSPs)
scaffold0056 (2-230)||(16871-17110)
scaffold0056 (152-230)||(79018-79096)
[»] scaffold0647 (1 HSPs)
scaffold0647 (2-230)||(5777-6016)
[»] scaffold0639 (1 HSPs)
scaffold0639 (2-230)||(8701-8940)
[»] scaffold0122 (2 HSPs)
scaffold0122 (40-230)||(25721-25922)
scaffold0122 (54-230)||(33150-33338)
[»] scaffold0026 (4 HSPs)
scaffold0026 (2-222)||(40083-40313)
scaffold0026 (2-93)||(26121-26213)
scaffold0026 (90-127)||(59271-59308)
scaffold0026 (151-230)||(39587-39666)
[»] scaffold0003 (1 HSPs)
scaffold0003 (2-141)||(339706-339845)
[»] scaffold0217 (1 HSPs)
scaffold0217 (42-230)||(16255-16455)
[»] scaffold0121 (1 HSPs)
scaffold0121 (23-220)||(8198-8406)
[»] scaffold0080 (2 HSPs)
scaffold0080 (2-131)||(40138-40268)
scaffold0080 (154-230)||(40300-40376)
[»] scaffold0231 (2 HSPs)
scaffold0231 (2-129)||(23108-23236)
scaffold0231 (151-230)||(23268-23347)
[»] scaffold0141 (1 HSPs)
scaffold0141 (42-131)||(39742-39832)
[»] scaffold0049 (1 HSPs)
scaffold0049 (42-131)||(74980-75070)
[»] scaffold0130 (2 HSPs)
scaffold0130 (2-137)||(28056-28192)
scaffold0130 (153-225)||(28924-28996)
[»] scaffold0395 (1 HSPs)
scaffold0395 (22-230)||(618-838)
[»] scaffold0228 (3 HSPs)
scaffold0228 (2-230)||(4733-4973)
scaffold0228 (2-230)||(12315-12555)
scaffold0228 (2-230)||(22267-22507)
[»] scaffold0627 (1 HSPs)
scaffold0627 (42-230)||(170-369)
[»] scaffold0084 (1 HSPs)
scaffold0084 (2-137)||(10389-10525)
[»] scaffold0120 (5 HSPs)
scaffold0120 (22-217)||(16333-16539)
scaffold0120 (13-126)||(32729-32843)
scaffold0120 (13-126)||(46162-46276)
scaffold0120 (182-228)||(32617-32663)
scaffold0120 (182-228)||(46342-46388)
[»] scaffold0839 (1 HSPs)
scaffold0839 (27-230)||(1734-1947)
[»] scaffold0389 (1 HSPs)
scaffold0389 (111-230)||(13264-13383)
[»] scaffold0247 (1 HSPs)
scaffold0247 (66-130)||(6561-6625)
[»] scaffold0142 (3 HSPs)
scaffold0142 (22-131)||(17026-17136)
scaffold0142 (152-230)||(17167-17245)
scaffold0142 (90-129)||(7537-7576)
[»] scaffold0876 (1 HSPs)
scaffold0876 (151-230)||(2741-2820)
[»] scaffold0540 (2 HSPs)
scaffold0540 (72-131)||(778-837)
scaffold0540 (158-230)||(669-741)
[»] scaffold0075 (2 HSPs)
scaffold0075 (151-230)||(7950-8029)
scaffold0075 (90-127)||(8062-8099)
[»] scaffold0221 (2 HSPs)
scaffold0221 (151-229)||(12466-12544)
scaffold0221 (93-129)||(12575-12611)
[»] scaffold0352 (2 HSPs)
scaffold0352 (2-94)||(17790-17882)
scaffold0352 (152-227)||(17667-17742)
[»] scaffold0413 (1 HSPs)
scaffold0413 (13-141)||(15370-15499)
[»] scaffold0192 (2 HSPs)
scaffold0192 (151-230)||(10296-10375)
scaffold0192 (90-129)||(10226-10265)
[»] scaffold1984 (1 HSPs)
scaffold1984 (85-131)||(440-486)
[»] scaffold0266 (1 HSPs)
scaffold0266 (151-225)||(18619-18693)
[»] scaffold0161 (2 HSPs)
scaffold0161 (154-230)||(2101-2177)
scaffold0161 (90-127)||(2213-2250)
[»] scaffold0100 (1 HSPs)
scaffold0100 (89-230)||(20426-20577)
[»] scaffold0347 (2 HSPs)
scaffold0347 (151-230)||(414-492)
scaffold0347 (90-129)||(344-383)
[»] scaffold0218 (1 HSPs)
scaffold0218 (155-230)||(28936-29011)
[»] scaffold0211 (2 HSPs)
scaffold0211 (89-132)||(28573-28616)
scaffold0211 (182-230)||(28465-28513)
[»] scaffold0166 (2 HSPs)
scaffold0166 (151-230)||(9490-9569)
scaffold0166 (90-129)||(9600-9639)
[»] scaffold0070 (2 HSPs)
scaffold0070 (22-124)||(4769-4872)
scaffold0070 (154-230)||(4912-4988)
[»] scaffold0028 (2 HSPs)
scaffold0028 (89-132)||(132967-133010)
scaffold0028 (90-125)||(58492-58527)
[»] scaffold0102 (1 HSPs)
scaffold0102 (85-131)||(19576-19622)
[»] scaffold0124 (2 HSPs)
scaffold0124 (155-227)||(24310-24382)
scaffold0124 (90-129)||(24417-24456)
[»] scaffold1137 (1 HSPs)
scaffold1137 (89-132)||(2065-2108)
[»] scaffold0628 (1 HSPs)
scaffold0628 (89-132)||(2566-2609)
[»] scaffold0150 (1 HSPs)
scaffold0150 (89-132)||(32397-32440)
[»] scaffold0037 (2 HSPs)
scaffold0037 (151-202)||(80016-80067)
scaffold0037 (90-129)||(80098-80137)
[»] scaffold0503 (2 HSPs)
scaffold0503 (152-230)||(12315-12393)
scaffold0503 (89-131)||(12243-12285)
[»] scaffold0475 (1 HSPs)
scaffold0475 (90-132)||(9391-9433)
[»] scaffold0327 (1 HSPs)
scaffold0327 (90-230)||(587-728)
[»] scaffold0261 (2 HSPs)
scaffold0261 (90-127)||(15974-16011)
scaffold0261 (154-230)||(16047-16123)
[»] scaffold0151 (1 HSPs)
scaffold0151 (161-230)||(10540-10609)
[»] scaffold0125 (1 HSPs)
scaffold0125 (90-131)||(45555-45596)
[»] scaffold0010 (2 HSPs)
scaffold0010 (90-131)||(130222-130263)
scaffold0010 (89-130)||(60479-60520)
[»] scaffold0031 (1 HSPs)
scaffold0031 (22-131)||(20190-20300)
[»] scaffold0676 (1 HSPs)
scaffold0676 (90-141)||(4738-4789)
[»] scaffold0372 (1 HSPs)
scaffold0372 (90-125)||(4875-4910)
[»] scaffold0029 (2 HSPs)
scaffold0029 (90-125)||(61386-61421)
scaffold0029 (90-123)||(65304-65337)
[»] scaffold0556 (1 HSPs)
scaffold0556 (90-132)||(7126-7168)
[»] scaffold0555 (3 HSPs)
scaffold0555 (89-131)||(10305-10347)
scaffold0555 (176-229)||(10225-10278)
scaffold0555 (182-230)||(996-1044)
[»] scaffold0507 (2 HSPs)
scaffold0507 (89-131)||(7822-7864)
scaffold0507 (182-230)||(7713-7761)
[»] scaffold0078 (1 HSPs)
scaffold0078 (89-131)||(10842-10884)
[»] scaffold0023 (1 HSPs)
scaffold0023 (89-131)||(101709-101751)
[»] scaffold0138 (1 HSPs)
scaffold0138 (90-131)||(13255-13296)
[»] scaffold0423 (1 HSPs)
scaffold0423 (190-230)||(10928-10968)
[»] scaffold0184 (1 HSPs)
scaffold0184 (90-130)||(3993-4033)
[»] scaffold0116 (2 HSPs)
scaffold0116 (150-230)||(43440-43520)
scaffold0116 (150-230)||(47360-47440)
[»] scaffold0044 (1 HSPs)
scaffold0044 (89-125)||(62556-62592)
[»] scaffold0022 (1 HSPs)
scaffold0022 (90-130)||(128735-128775)
[»] scaffold0020 (1 HSPs)
scaffold0020 (150-230)||(15486-15566)
[»] scaffold0017 (1 HSPs)
scaffold0017 (89-125)||(192757-192793)


Alignment Details
Target: chr6 (Bit Score: 226; Significance: 1e-125; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 22831727 - 22831956
Alignment:
Q  1 caagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22831727 caagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcg 22831826  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22831827 agagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatg 22831926  T
Q  201 ttgaaacactcaaaagcatctaaggttcaa 230  Q
    || |||||||||||||||||||||||||||    
T  22831927 ttcaaacactcaaaagcatctaaggttcaa 22831956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 16920528 - 16920300
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    ||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||    
T  16920528 aagtcttaattctacccaagggttcaactctcgagaaatcgtgcaacaaaggtcgcaaaatccaacaagtcactttgtttctgggtcactcgcaaggcga 16920429  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    ||||||||||||||| |||||||||||||| ||||| |||| ||||||||||||||| ||||||  ||||| ||||||  ||||||| |||||||||| |    
T  16920428 gagcctctgctcgccatggcgagttcaggtcagaattccataagtttaattccaggtacaatcttatcctacattcttttctaatcattattagacatat 16920329  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | |  ||||||||||||||||||||||||    
T  16920328 tcaggcactcaaaagcatctaaggttcaa 16920300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 11185728 - 11185956
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||||||||| | |  |||||| |  | ||| ||||||||||||||||| ||||||||||| ||||||| |||||||| ||||||||    
T  11185728 aagtcttaatcctacccaagggtccgatcctcgacaacccatgcaacaaaggtcgcaaaatctaacaagtcactatgtttctgggtcactcacgaggcga 11185827  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||    
T  11185828 gggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactcttcactaatcaatattcgacatgt 11185927  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | |  |||||||| |||||||||||||||    
T  11185928 tcaggcactcaaaggcatctaaggttcaa 11185956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 18821715 - 18821486
Alignment:
Q  1 caagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    ||||||||||| |||||| | ||||||||||||||| | |||||| ||||||||||||||||| ||||||||||||||||||| |||| |||||||||||    
T  18821715 caagtcttaatgctaccccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcgctcgcgaggcg 18821616  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatg 200  Q
    |||||||||||||||| |||||||||||||| |||||||||  ||||| ||||||||||||||||| ||||| |||||   ||||||| ||||| |||||    
T  18821615 agagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttcattccaggttcaatctcatcctacattctctcctaatcattattaaacatg 18821516  T
Q  201 ttgaaacactcaaaagcatctaaggttcaa 230  Q
    || |  ||||||||||||||||||||||||    
T  18821515 ttcaggcactcaaaagcatctaaggttcaa 18821486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 22 - 230
Target Start/End: Complemental strand, 20638158 - 20637950
Alignment:
Q  22 ggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggc 121  Q
    ||||||||||||||| | |||||| ||||||||||||||||| |||||| |||||||||||| |||||||||||||| |||||||| |||||||||||||    
T  20638158 ggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaaggcactctgtttctgggtcactcgcgaggtgagagcctttgctcgccgtggc 20638059  T
Q  122 gagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatct 221  Q
    |||||||||| |||||||||  ||||| ||||||||||||||||| ||||| ||||||  ||||||| ||||||||||||| |  |||||||||||||||    
T  20638058 gagttcaggtcagaatcccacaagtttcattccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatct 20637959  T
Q  222 aaggttcaa 230  Q
    |||||||||    
T  20637958 aaggttcaa 20637950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 20360855 - 20360627
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||||| |||||||  ||| || | |||||| ||||||||||||||| | ||||||||||||||||||| |||||||||||||||||    
T  20360855 aagtcttaatactacccaaaggttcaatcctcaacaactcgtgcaacaaaggtcgcaaaacctaacaagtcactctgtttctgggtcactcgcgaggcga 20360756  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    ||||||| ||||||| |||||||||||||| |||||||||  ||||| ||||||||||||||||| ||||| ||||||  ||||||| ||||||||||||    
T  20360755 gagcctcagctcgccatggcgagttcaggtcagaatcccacaagtttcattccaggttcaatctcatcctacattctttcctaatcattattagacatgt 20360656  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | |  ||||||||| ||||||||| ||||    
T  20360655 tcaggcactcaaaaacatctaaggatcaa 20360627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 22780122 - 22779883
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    ||||||| || |||||| | ||||||||||||| | | | |||| ||||||||| ||||| | |||| | |||||||||||| ||| |||||||||||||    
T  22780122 aagtctttatactaccccaaggttcaactctcggcaacttgtgcaacaaaggtcacaaaacctaacaggacactctgtttctaggttactcgcgaggcga 22780023  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaa-----------ttccaggttcaatctcgtcctatattcttcactaatcaat 190  Q
    |||||| |||| ||||||||||||| |||| |||||||||  ||||| |           |||||||||||||||| ||||| ||||||  ||||||| |    
T  22780022 gagcctttgcttgccgtggcgagtttaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcatt 22779923  T
Q  191 attagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||| |  ||||||||||||||||||| ||||    
T  22779922 attagacatgttcaggcactcaaaagcatctaaggatcaa 22779883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 18409722 - 18409483
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    |||||| ||| |||||| | |||||||||||| |  | |||||| |||||||||| ||||||| |||||| |||||||||||| ||||||| | ||||||    
T  18409722 aagtctcaatactaccctaaggttcaactctcaataactcgtgcaacaaaggtcgtaaaatcctaacaaggcactctgtttctgggtcactagagaggcg 18409623  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaa----------ttccaggttcaatctcgtcctatattcttcactaatcaat 190  Q
    ||||||||||||||||||||||||||||||| ||||| | |  ||||| |          |||||||||||||||| | ||| ||||||  ||||||| |    
T  18409622 agagcctctgctcgccgtggcgagttcaggtcagaattcaaaaagtttcattctaaatctttccaggttcaatctcattctacattctttcctaatcatt 18409523  T
Q  191 attagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    | |||||||||| |  ||||||||||||||||||| ||||    
T  18409522 aatagacatgttaaggcactcaaaagcatctaaggatcaa 18409483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 230
Target Start/End: Complemental strand, 19303396 - 19303197
Alignment:
Q  42 gtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaatccc 140  Q
    |||||||| || ||||||||||| |||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| | ||    
T  19303396 gtgcgacatagatcgcaaaatcctaacaaggcactctgtttctgggtcactctcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttcc 19303297  T
Q  141 atcagtttaattc----------caggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |  ||||| ||||          ||||||||||||| | ||| ||||||  ||||||| ||||||||||||| |  ||||||||||||||||||| ||||    
T  19303296 aaaagtttcattctaaatcttttcaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaa 19303197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 42 - 230
Target Start/End: Original strand, 20594039 - 20594238
Alignment:
Q  42 gtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaatccc 140  Q
    |||||||| || ||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||| | ||    
T  20594039 gtgcgacacagatcgcaaaatcctaacaaggcactctgtttctaggtcactcgcgaggcgagagcctctgctcgccgtagcgagttcaggtcagatttcc 20594138  T
Q  141 atcagttta----------attccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |  ||||||           |||||||||||||||| ||||| ||||||| |||||||   ||||||||||| |  ||||||||| ||||||||| ||||    
T  20594139 aaaagtttattctacaatctttccaggttcaatctcatcctacattcttccctaatcatatttagacatgtttaggcactcaaaaacatctaaggatcaa 20594238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 40 - 230
Target Start/End: Original strand, 29060804 - 29061005
Alignment:
Q  40 tcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaatc 138  Q
    |||||| |||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||| ||| |     
T  29060804 tcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctactcgtcgtggcgagttcaggtcagattt 29060903  T
Q  139 ccatcagtt----------taattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttc 228  Q
    |||  ||||          |  |||||||||||||||| ||||| |||| |  ||||||| |||| |||||||| |  ||||||||||||||||||| ||    
T  29060904 ccaaaagttcattctacaatctttccaggttcaatctcatcctacattccttcctaatcattattggacatgttcaggcactcaaaagcatctaaggatc 29061003  T
Q  229 aa 230  Q
    ||    
T  29061004 aa 29061005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 25629250 - 25629120
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    |||||| ||| |||||| | |||||||||||  || | |||||| ||||| |||||||||||| |||||| |||||||||||| ||||||||||||||||    
T  25629250 aagtctcaatactaccccaaggttcaactcttaacaactcgtgcaacaaaagtcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcg 25629151  T
Q  101 agagcctctgctcgccgtggcgagttcaggt 131  Q
    ||||||||||||||||  ||||||| |||||    
T  25629150 agagcctctgctcgccacggcgagtacaggt 25629120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 17287691 - 17287452
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||| ||| |||||| | |||||||||||| || | |||||| |||||| | |||||  | |||||| |||||||||||| |||||||| |||| | |    
T  17287691 aagtctcaatgctaccccaaggttcaactctcaacaactcgtgcaacaaagatagcaaaccctaacaagacactctgtttctgggtcactcacgagacaa 17287592  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaa-----------ttccaggttcaatctcgtcctatattcttcactaatcaat 190  Q
    ||||||||  ||||||||||||||| |||| |||||||||  ||||| |           |||||||| ||||| | ||||| ||||||  ||||||| |    
T  17287591 gagcctctaatcgccgtggcgagtttaggtcagaatcccacaagtttcattctacaatctttccaggtacaatcacatcctacattctttcctaatcatt 17287492  T
Q  191 attagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||| |  ||||||||||||||||||| ||||    
T  17287491 attagacatgttcaggcactcaaaagcatctaagggtcaa 17287452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 89 - 230
Target Start/End: Complemental strand, 29808691 - 29808539
Alignment:
Q  89 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaatccca-----tcagtttaa------ttccaggttcaatctcgtcctatattc 177  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||| |||||     ||| | |||      |||||||||||||||| | ||| ||||    
T  29808691 actcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaaatctttccaggttcaatctcattctacattc 29808592  T
Q  178 ttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||  ||||||| ||||||||||||| |  ||||||||||||||||||| ||||    
T  29808591 ttttctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaa 29808539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 230
Target Start/End: Complemental strand, 28496280 - 28496129
Alignment:
Q  89 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattc----------caggttcaatctcgtcctatattct 178  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||| || ||  ||||| ||||          ||||||||||||| | ||| |||||    
T  28496280 actcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattctcaaaagtttcattctaagtctttccaggttcaatctcattctacattct 28496181  T
Q  179 tcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |  ||||||| ||||||||||||| |  ||||||||||||||||||| ||||    
T  28496180 tttctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaa 28496129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 1561689 - 1561768
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||||||| | |||  |||||  ||||||| ||||||||||||| |  ||||||||||||||||||||||||    
T  1561689 ttccaggttcaatctcattctactttctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaa 1561768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 22 - 230
Target Start/End: Original strand, 18456961 - 18457179
Alignment:
Q  22 ggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtg 119  Q
    |||||||||||| |||| ||||||||||||| |||||||||||  |||||| |  |||||   | ||  ||||||||||||||||||||| |||||| ||    
T  18456961 ggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctgaacaaggct-tctgtaattgggcaactcgcgaggcgagagcctctactcgccatg 18457059  T
Q  120 gcgagttcaggttagaatcccatcagtt------taatt---ccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacact 210  Q
    || ||||||||| ||  ||| |  ||||      |||||   |||||||||||||| | ||| ||||||  ||||||| ||||| ||||||| |  ||||    
T  18457060 gctagttcaggtcagcttccaaaaagttcattcttaattaatccaggttcaatctcattctacattctttcctaatcattattaaacatgttcaggcact 18457159  T
Q  211 caaaagcatctaaggttcaa 230  Q
    ||||||||||||||| ||||    
T  18457160 caaaagcatctaaggatcaa 18457179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 139
Target Start/End: Complemental strand, 25611530 - 25611481
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaatcc 139  Q
    |||||||||||||||||||||||| || |||||||||||||| |||||||    
T  25611530 ctcgcgaggcgagagcctctgctctccatggcgagttcaggtcagaatcc 25611481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 230
Target Start/End: Complemental strand, 15894237 - 15894086
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaatccca-------tcagtttaa----ttccaggttcaatctcgtcctatattct 178  Q
    ||||||||| ||||| ||||||||||| |||||||||||||| |||||||||       ||| | |||    |||||||| ||||||| || || ||||     
T  15894237 ctcgcgaggtgagagactctgctcgccatggcgagttcaggtcagaatcccaagttctttcattctaagtctttccaggtccaatctcatcttacattca 15894138  T
Q  179 tcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
       ||||||||||||||||||||| |  |||||||| |||||||||||||||    
T  15894137 ctcctaatcaatattagacatgttcaggcactcaaaggcatctaaggttcaa 15894086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 129
Target Start/End: Original strand, 21939699 - 21939738
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 129  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  21939699 ctcgcgaggcgagagcctctgctcgccatggcgagttcag 21939738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 21939769 - 21939848
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||| |||||||| ||||| ||||||  ||||||||||||| ||||||| |  |||||||  |||||||||||||||    
T  21939769 ttccaggctcaatctcatcctacattctttcctaatcaatattacacatgttcaggcactcaagggcatctaaggttcaa 21939848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 132
Target Start/End: Complemental strand, 4185629 - 4185587
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtt 132  Q
    |||||||||||||||||||| |||||| |||||||||||||||    
T  4185629 ctcgcgaggcgagagcctctactcgccatggcgagttcaggtt 4185587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 132
Target Start/End: Complemental strand, 4668019 - 4667977
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtt 132  Q
    |||||||||||||||||||| |||||| |||||||||||||||    
T  4668019 ctcgcgaggcgagagcctctactcgccatggcgagttcaggtt 4667977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 128
Target Start/End: Complemental strand, 25641991 - 25641953
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttca 128  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  25641991 ctcgcgaggcgagagcatctgctcgccgtggcgagttca 25641953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 22080543 - 22080502
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  22080543 ctcgcgaggcgagagcctctactcgccatggcgagttcaggt 22080502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 22334586 - 22334538
Alignment:
Q  182 ctaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||||||||||||||| |  |||||||| |||||||||||||||    
T  22334586 ctaatcaatattagacatgttcaggcactcaaaggcatctaaggttcaa 22334538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 27333089 - 27333049
Alignment:
Q  91 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    ||||||||||||||||||| |||||| ||||||||||||||    
T  27333089 tcgcgaggcgagagcctctactcgccatggcgagttcaggt 27333049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 27393829 - 27393789
Alignment:
Q  91 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    ||||||||||||||||||| |||||| ||||||||||||||    
T  27393829 tcgcgaggcgagagcctctactcgccatggcgagttcaggt 27393789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Original strand, 8244158 - 8244193
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagt 125  Q
    |||||||||||||||| |||||||||||||||||||    
T  8244158 ctcgcgaggcgagagcatctgctcgccgtggcgagt 8244193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Original strand, 11567160 - 11567195
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagt 125  Q
    |||||||||||||||| |||||||||||||||||||    
T  11567160 ctcgcgaggcgagagcatctgctcgccgtggcgagt 11567195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 131
Target Start/End: Original strand, 19652512 - 19652551
Alignment:
Q  92 cgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    |||||||||||||||||| |||||| ||||||||||||||    
T  19652512 cgcgaggcgagagcctctactcgccatggcgagttcaggt 19652551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Original strand, 19870888 - 19870923
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagt 125  Q
    |||||||||||||||| |||||||||||||||||||    
T  19870888 ctcgcgaggcgagagcatctgctcgccgtggcgagt 19870923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 141
Target Start/End: Complemental strand, 22334699 - 22334648
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaatccca 141  Q
    |||||||||||||||| ||||||| || ||||||||| |||| |||||||||    
T  22334699 ctcgcgaggcgagagcatctgctcaccatggcgagtttaggtcagaatccca 22334648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Original strand, 22863243 - 22863278
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagt 125  Q
    |||||||||||||||| |||||||||||||||||||    
T  22863243 ctcgcgaggcgagagcatctgctcgccgtggcgagt 22863278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Original strand, 23395366 - 23395401
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagt 125  Q
    |||||||||||||||| |||||||||||||||||||    
T  23395366 ctcgcgaggcgagagcatctgctcgccgtggcgagt 23395401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 132
Target Start/End: Complemental strand, 31155204 - 31155162
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtt 132  Q
    ||||||||||||||||||||||||||| ||| |||| ||||||    
T  31155204 ctcgcgaggcgagagcctctgctcgccatggagagtacaggtt 31155162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 25603188 - 25603143
Alignment:
Q  94 cgaggcgagagcctctgctcgccgtggcgagttcaggttagaatcc 139  Q
    ||||||||||||||||||||||| ||| ||||||| || |||||||    
T  25603188 cgaggcgagagcctctgctcgccatggtgagttcaagtcagaatcc 25603143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 16924687 - 16924647
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcagg 130  Q
    |||||||||||||||| |||||||||| |||||||| ||||    
T  16924687 ctcgcgaggcgagagcatctgctcgccatggcgagtacagg 16924647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 16929402 - 16929362
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcagg 130  Q
    |||||||||||||||| |||||||||| |||||||| ||||    
T  16929402 ctcgcgaggcgagagcatctgctcgccatggcgagtacagg 16929362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 130
Target Start/End: Original strand, 19668688 - 19668728
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcagg 130  Q
    |||||||||||||||||||| |||||  |||||||||||||    
T  19668688 ctcgcgaggcgagagcctctactcgctatggcgagttcagg 19668728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 22080441 - 22080393
Alignment:
Q  182 ctaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||| ||||||||||||| |  ||||||||| ||||||||||||||    
T  22080441 ctaatcattattagacatgttcagtcactcaaaaacatctaaggttcaa 22080393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 230
Target Start/End: Original strand, 23019792 - 23019872
Alignment:
Q  150 attccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||||||||   ||| | ||||  ||||||| ||| | ||||||| |  ||||||||||||||||||||||||    
T  23019792 attccaggttcaatctcaatctaaaatctttcctaatcattatcacacatgttcaggcactcaaaagcatctaaggttcaa 23019872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 23657229 - 23657189
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcagg 130  Q
    |||||||||||||||| |||||||||| |||||||| ||||    
T  23657229 ctcgcgaggcgagagcatctgctcgccatggcgagtacagg 23657189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 25611427 - 25611379
Alignment:
Q  182 ctaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||| ||||||||||||| |  |||||||| |||||||||||||||    
T  25611427 ctaatcattattagacatgttcaggcactcaaaggcatctaaggttcaa 25611379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 10321 - 10093
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    ||||||||||||||||||||||||||||||||||| | |||||| |||| |||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  10321 aagtcttaattctacccaagggttcaactctcgacaactcgtgcaacaatggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcgaggcga 10222  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    |||||||||||| ||||||||||||||||| |||||||||  ||||||||||||||||||||||| ||||| ||||||  ||||||| ||||||||||||    
T  10221 gagcctctgctccccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaatctcatcctacattctttcctaatcattattagacatgt 10122  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | |  ||||||||||||||||||||||||    
T  10121 tcaggcactcaaaagcatctaaggttcaa 10093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 157; Significance: 1e-83; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 20698331 - 20698103
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||||||| |||| ||||||||||||||| | |||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  20698331 aagtcttaattctatccaaaggttcaactctcgacaactcgtgccacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcgaggcga 20698232  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    |||||||||||||||||||||||||||||| |||||||||  ||||| ||||||||||||||||| ||||| ||||||  ||||||| ||||||||||||    
T  20698231 gagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattccaggttcaatctcatcctacattctttcctaatcattattagacatgt 20698132  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | | |||||||||||||||||||||||||    
T  20698131 tcagacactcaaaagcatctaaggttcaa 20698103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 23 - 230
Target Start/End: Original strand, 26687134 - 26687352
Alignment:
Q  23 gttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggcg 122  Q
    ||||||||||| |||| |||||| |||||||||| |||| | |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  26687134 gttcaactctcaacgattcgtgcaacaaaggtcgtaaaacctaacaagacactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcg 26687233  T
Q  123 agttcaggttagaatcccatcagtttaa-----------ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactc 211  Q
    ||||||||| |||||||||  ||||| |           |||||||||||||||| ||||| ||||||  ||||||| ||||||||||||| |  |||||    
T  26687234 agttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattattagacatgtttaggcactc 26687333  T
Q  212 aaaagcatctaaggttcaa 230  Q
    |||||||||||||| ||||    
T  26687334 aaaagcatctaaggatcaa 26687352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 2 - 223
Target Start/End: Complemental strand, 40213616 - 40213384
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    |||||| ||| |||||| | |||| ||||||| || | |||||| |||||||||||||||||| |||||| |||||||||||| ||||||||||||||||    
T  40213616 aagtctcaatactaccccaaggttaaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcg 40213517  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaatcccatcagtt----------taattccaggttcaatctcgtcctatattcttcactaatcaat 190  Q
    ||||||||||||||||||||||||||||||||||| |||||  ||||          |  |||||||||||||||| ||||| ||||||  ||||||| |    
T  40213516 agagcctctgctcgccgtggcgagttcaggttagattcccaaaagttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcatt 40213417  T
Q  191 attagacatgttgaaacactcaaaagcatctaa 223  Q
    |||||||||||| |  |||||||||||||||||    
T  40213416 attagacatgttcaggcactcaaaagcatctaa 40213384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 30030065 - 30030293
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcgg-tcactcgcgaggcg 100  Q
    |||||||||  |||||||| ||||||||||||||| | |||||| ||||||||||||||||| |||||| || |||| |||| || | ||||||||||||    
T  30030065 aagtcttaaagctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaaggcattctg-ttctgggattactcgcgaggcg 30030163  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaa-tcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacat 199  Q
    |||||||||||||||| ||||||||| |||| |||| ||| | | |||| ||||||||||||||||| ||| | ||||||   |||||| ||||||||||    
T  30030164 agagcctctgctcgccatggcgagtt-aggtcagaattccaaactgtttcattccaggttcaatctcatcccacattctttcgtaatcattattagacat 30030262  T
Q  200 gttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||| | ||||||||| |||||||||||||||    
T  30030263 gttcagacactcaaaggcatctaaggttcaa 30030293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 2 - 225
Target Start/End: Original strand, 17488082 - 17488317
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgttt-ctcggtcactcgcgaggcg 100  Q
    |||||||||| ||| || | ||||||||||||||| | |||||| ||||||||||||||||| |||||| |||||||||| || ||||||||||||||||    
T  17488082 aagtcttaatgctatcccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaaggcactctgttttctaggtcactcgcgaggcg 17488181  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaa-----------ttccaggttcaatctcgtcctatattcttcactaatcaa 189  Q
    ||||||||||||||||||||||| ||||||| ||||||| |  ||||| |           |||||||||||||||| ||||| ||||||  |||||||     
T  17488182 agagcctctgctcgccgtggcgatttcaggtcagaatcctacaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcat 17488281  T
Q  190 tattagacatgttgaaacactcaaaagcatctaagg 225  Q
    ||||||||||||| |  |||||||| ||||||||||    
T  17488282 tattagacatgttcaggcactcaaaggcatctaagg 17488317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 22 - 216
Target Start/End: Original strand, 13442520 - 13442725
Alignment:
Q  22 ggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggc 121  Q
    ||||||||||||||| | |||||| ||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13442520 ggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggc 13442619  T
Q  122 gagttcaggttagaatcccatcagtttaattc-----------caggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacact 210  Q
     ||||||||| |||||||||  ||||| ||||           ||||||||||||| ||||| ||| ||  ||||||| ||||||||||||| |  ||||    
T  13442620 aagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattttttcctaatcattattagacatgttcaggcact 13442719  T
Q  211 caaaag 216  Q
    ||||||    
T  13442720 caaaag 13442725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 40 - 230
Target Start/End: Original strand, 12399473 - 12399660
Alignment:
Q  40 tcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaatcc 139  Q
    |||||| |||||||||| |||| | |||||||||||  |||||| ||||||||| ||||||||||||| | ||||||||||||||||||||| |||| |     
T  12399473 tcgtgcaacaaaggtcggaaaa-ctaacaagtcact--gtttctgggtcactcgtgaggcgagagcctttactcgccgtggcgagttcaggtcagaacct 12399569  T
Q  140 catcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||  ||||| ||||||||||||| | | ||||||||| ||  ||||||| ||||||||||||| |  ||||||||||||||||||||||||    
T  12399570 cacaagtttcattccaggttcaaacccatcctatattttttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaa 12399660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 225
Target Start/End: Original strand, 17499564 - 17499799
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctg-tttctcggtcactcgcgaggcg 100  Q
    |||||||||| ||| || | ||||||||||||||| | |||||| ||||||||||||||||| |||||| ||||||| ||||| ||||||| | ||||||    
T  17499564 aagtcttaatgctatcccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaaggcactctgttttctaggtcactagagaggcg 17499663  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaa-----------ttccaggttcaatctcgtcctatattcttcactaatcaa 189  Q
    ||||||||||||| ||||||||| ||||||| ||||||| |  ||||| |           |||||||||||||||| ||||| ||||||  |||||||     
T  17499664 agagcctctgctcaccgtggcgaattcaggtcagaatccaacaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcat 17499763  T
Q  190 tattagacatgttgaaacactcaaaagcatctaagg 225  Q
    ||||||||||||| |  |||||||| ||||||||||    
T  17499764 tattagacatgttcaggcactcaaaggcatctaagg 17499799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 18438760 - 18438999
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    |||||| ||| |||||| | |||||||| ||| || | |||||| ||||||||||||||| || |||||| |||||||||||| ||||||||||||||||    
T  18438760 aagtctcaatactaccccaaggttcaacactcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagacactctgtttctgggtcactcgcgaggcg 18438859  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaa----------ttccaggttcaatctcgtcctatattcttcactaatcaat 190  Q
    ||||||||||||||||||||| | ||||||| ||||| |||  ||||| |          |||||||||||||||| |  || ||||||  ||||||| |    
T  18438860 agagcctctgctcgccgtggcaacttcaggtcagaattccaaaagtttcattctaaatctttccaggttcaatctcattttacattctttcctaatcatt 18438959  T
Q  191 attagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||| |  ||||||||||||||||||| ||||    
T  18438960 attagacatgttcaggcactcaaaagcatctaaggatcaa 18438999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 14572814 - 14573053
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    |||||||||| |||||| | |||||||||||| || | |||||| ||||||||||||||| || ||||||  ||||||||||| ||||||||||||||||    
T  14572814 aagtcttaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaaggtactctgtttctaggtcactcgcgaggcg 14572913  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaatccca------tcagtttaa----ttccaggttcaatctcgtcctatattcttcactaatcaat 190  Q
    ||||||||| |||||| |||||||||||||| ||| | |||      ||| | |||    |||||||||||||||| | ||| ||||||  ||||||| |    
T  14572914 agagcctctactcgccatggcgagttcaggtcagatttccaaaggtttcattctaagtctttccaggttcaatctcattctacattctttcctaatcatt 14573013  T
Q  191 attagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||| |  |||||||| |||||||||| ||||    
T  14573014 attagacatgttcaggcactcaaaggcatctaaggatcaa 14573053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 131
Target Start/End: Complemental strand, 14576725 - 14576598
Alignment:
Q  5 tcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgaga 103  Q
    ||||||| |||||| | |||||||||||| || | |||||| |||||||||||||||||| |||||| |||| ||||||| |||||||||||||||||||    
T  14576725 tcttaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactttgtttctaggtcactcgcgaggcgaga 14576626  T
Q  104 gcctctgctcgccgtggcgagttcaggt 131  Q
    |||||| |||||||||||| ||||||||    
T  14576625 gcctctactcgccgtggcgtgttcaggt 14576598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 25476260 - 25476150
Alignment:
Q  22 ggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtgg 120  Q
    |||||||||||| || | |||||| |||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||| |||| |||||    
T  25476260 ggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctactcgtcgtgg 25476161  T
Q  121 cgagttcaggt 131  Q
    |||||||||||    
T  25476160 cgagttcaggt 25476150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 11424658 - 11424419
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    |||||| ||| |||||| |  ||||||||||| || | |||||| ||||||||||||||| || |||||| |||||||||||| |||| |||||||||||    
T  11424658 aagtctcaatactaccccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagacactctgtttctaggtcgctcgcgaggcg 11424559  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaa----------ttccaggttcaatctcgtcctatattcttcactaatcaat 190  Q
    ||||||||| ||||||||||||||||||||| ||| | | |  ||||| |          |||||||||||||||| | ||| ||| ||  ||||||| |    
T  11424558 agagcctctactcgccgtggcgagttcaggtcagagttcaaaaagtttcattctaaatctttccaggttcaatctcattctacattatttcctaatcatt 11424459  T
Q  191 attagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||| |  ||||||||||||||||||| ||||    
T  11424458 attagacatgttcaggcactcaaaagcatctaaggatcaa 11424419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 22 - 230
Target Start/End: Complemental strand, 17248161 - 17247942
Alignment:
Q  22 ggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtg 119  Q
    |||| ||||||| |||| ||||||||||||| ||||||||| |  |||||| || |||||  || |||||||||||||||||||||||||||||||| ||    
T  17248161 ggtttaactctcaacgactcgtgcgacaaagatcgcaaaattctaaacaag-cattctgtaactgggtcactcgcgaggcgagagcctctgctcgccatg 17248063  T
Q  120 gcgagttcaggttagaatccca-----tcagtttaa-----ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacac 209  Q
    |||||||||||| ||| |||||     ||| | |||     |||||||||||||||| | ||| ||||||  ||||||| ||||||||||||| |  |||    
T  17248062 gcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcac 17247963  T
Q  210 tcaaaagcatctaaggttcaa 230  Q
    |||||| ||||||||| ||||    
T  17247962 tcaaaaacatctaaggatcaa 17247942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 14973132 - 14973216
Alignment:
Q  54 tcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaat 137  Q
    ||||||||||| |||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  14973132 tcgcaaaatcctaacaaggcactctgtttctgggtcacttgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaat 14973216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 137
Target Start/End: Original strand, 43841203 - 43841293
Alignment:
Q  47 acaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaat 137  Q
    ||||||||||||||| | |||||| |||||||||||| |||||||||||||||||| |||| ||||||| ||||||||||||||| |||||    
T  43841203 acaaaggtcgcaaaacctaacaagacactctgtttctgggtcactcgcgaggcgagggcctttgctcgctgtggcgagttcaggtcagaat 43841293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 126
Target Start/End: Complemental strand, 23083256 - 23083132
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||  | |||||||||||  || | |||||| ||||||||||||||| | |||||| |||| ||||||| ||||| |||||||||||    
T  23083256 aagtcttaatactacctcaaggttcaactctgaacaactcgtgcaacaaaggtcgcaaaacctaacaagacactatgtttctgggtcattcgcgaggcga 23083157  T
Q  102 gagcctctgctcgccgtggcgagtt 126  Q
    |||||||| |||||| |||||||||    
T  23083156 gagcctctactcgccatggcgagtt 23083132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 100 - 230
Target Start/End: Original strand, 16809724 - 16809850
Alignment:
Q  100 gagagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacat 199  Q
    |||||| |||||||||| |||||||||||||| |||||||||  ||||| |||||||| |||||||| ||||| ||||||  ||||||| ||||    ||    
T  16809724 gagagcatctgctcgccatggcgagttcaggtcagaatcccacaagtttcattccaggatcaatctcatcctacattctttcctaatcattatt----at 16809819  T
Q  200 gttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||| || ||||||||||||| ||||||||||    
T  16809820 gttcaagcactcaaaagcatttaaggttcaa 16809850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 16796773 - 16796875
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||||| |||||||||||  || | |||||| |||||||||||||| ||  ||||| |||||||||||  |||||||||||||||||    
T  16796773 aagtcttaatgctacccaaaggttcaactcttaacaattcgtgcaacaaaggtcgcaaagtctcacaaggcactctgtttccgggtcactcgcgaggcga 16796872  T
Q  102 gag 104  Q
    |||    
T  16796873 gag 16796875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 230
Target Start/End: Original strand, 12340068 - 12340217
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaatc-cca-----tcagtttaa----ttccaggttcaatctcgtcctatattctt 179  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||| || |||     ||| | |||    |||||||||||||||| ||||| ||||||    
T  12340068 ctcgcgaggcgagagcctctgctcgccatggcgagttcag-ttagattctccaaagtttcattctaagtctttccaggttcaatctcatcctacattctt 12340166  T
Q  180 cactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
      ||||||||||||||||||||| |  |||||||| |||||||||||||||    
T  12340167 tcctaatcaatattagacatgttcaggcactcaaaggcatctaaggttcaa 12340217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 154 - 230
Target Start/End: Complemental strand, 4588547 - 4588471
Alignment:
Q  154 caggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||||||| ||||| ||||||  ||||||||||||||||||||| |  |||||||| |||||||||||||||    
T  4588547 caggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaaggcatctaaggttcaa 4588471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 13 - 230
Target Start/End: Complemental strand, 53070582 - 53070355
Alignment:
Q  13 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctg 110  Q
    |||||| | |||||||||||| |||| ||||||||||||| |||||||||||  |||||| |  |||||   | ||  |||||||||||||||||||||     
T  53070582 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaaggct-tctgtaattgggcaactcgcgaggcgagagcctcta 53070484  T
Q  111 ctcgccgtggcgagttcaggttagaatcccatcagtt------taatt---ccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    |||||| |||||||||||||| ||  ||| |  ||||      |||||   |||||||||||||| | ||| ||||||  ||||||| ||||| ||||||    
T  53070483 ctcgccatggcgagttcaggtcagcttccaaaaagttcattcttaattaatccaggttcaatctcattctacattctttcctaatcattattaaacatgt 53070384  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | |  ||||||||||||||||||| ||||    
T  53070383 tcaggcactcaaaagcatctaaggatcaa 53070355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 89 - 132
Target Start/End: Complemental strand, 1644489 - 1644446
Alignment:
Q  89 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtt 132  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  1644489 actcgcgaggcgagagcctctgctcgccatggcgagttcaggtt 1644446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 14179708 - 14179787
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||| |||||||||| | ||| ||||||  ||||||| ||||||||||||| |  ||||||||||||||||||||||||    
T  14179708 ttccaagttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaa 14179787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 89 - 132
Target Start/End: Original strand, 32307983 - 32308026
Alignment:
Q  89 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtt 132  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  32307983 actcgcgaggcgagagcctctgctcgccatggcgagttcaggtt 32308026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 89 - 132
Target Start/End: Complemental strand, 49667890 - 49667847
Alignment:
Q  89 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtt 132  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  49667890 actcgcgaggcgagagcctctgctcgccatggcgagttcaggtt 49667847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 132
Target Start/End: Complemental strand, 12934117 - 12934074
Alignment:
Q  89 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtt 132  Q
    |||||||||||||||| ||||||||||| |||||||||||||||    
T  12934117 actcgcgaggcgagagtctctgctcgccatggcgagttcaggtt 12934074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 13210062 - 13209984
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||||||| | |||  |||||  ||||||| ||||||||||||| |  ||||||||||||||||||||||||    
T  13210062 ttccaggttcaatctcattctactttctttcctaatca-tattagacatgtttaggcactcaaaagcatctaaggttcaa 13209984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 14665991 - 14666070
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||||||| ||||| ||||||  |||||||||||||| |||||| |  |||||||   ||||||||||||||    
T  14665991 ttccaggttcaatctcatcctacattctttcctaatcaatattagccatgttcaggcactcaacgacatctaaggttcaa 14666070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 14669146 - 14669225
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||||||| ||||| ||||||  ||| ||||||||||||||||| |  |||||||   ||||||||||||||    
T  14669146 ttccaggttcaatctcatcctacattctttcctattcaatattagacatgttcaggcactcaacgacatctaaggttcaa 14669225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 14735504 - 14735583
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||||||| ||||| ||||||  |||||||||||||| |||||| |  |||||||   ||||||||||||||    
T  14735504 ttccaggttcaatctcatcctacattctttcctaatcaatattagccatgttcaggcactcaacgacatctaaggttcaa 14735583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 9513299 - 9513375
Alignment:
Q  154 caggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||||||| | || || ||||  ||||||| ||||||||||||| |  ||||||||||||||||||| ||||    
T  9513299 caggttcaatctcattctctaatctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaa 9513375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 9521274 - 9521350
Alignment:
Q  154 caggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||||||| | || || ||||  ||||||| ||||||||||||| |  ||||||||||||||||||| ||||    
T  9521274 caggttcaatctcattctctaatctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaa 9521350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 12852099 - 12852027
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaa 223  Q
    |||||| ||||||||| ||||| ||||||  ||||||||||||||||||||| |  |||||||  ||||||||    
T  12852099 ttccagattcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaagggcatctaa 12852027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Original strand, 7109999 - 7110034
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagt 125  Q
    |||||||||||||||| |||||||||||||||||||    
T  7109999 ctcgcgaggcgagagcatctgctcgccgtggcgagt 7110034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Original strand, 7113934 - 7113969
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagt 125  Q
    |||||||||||||||| |||||||||||||||||||    
T  7113934 ctcgcgaggcgagagcatctgctcgccgtggcgagt 7113969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 129
Target Start/End: Complemental strand, 12852169 - 12852130
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 129  Q
    |||||||||| |||||||||||||||| ||||||||||||    
T  12852169 ctcgcgaggcaagagcctctgctcgccatggcgagttcag 12852130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 12934045 - 12933966
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||||||| | || || ||||  ||||||| ||||||||||||| |  ||||||||| ||||||||| ||||    
T  12934045 ttccaggttcaatctcattctctaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggatcaa 12933966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 129
Target Start/End: Original strand, 14665921 - 14665960
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 129  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  14665921 ctcgcgaggcgagagcctctgctcgccattgcgagttcag 14665960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 129
Target Start/End: Original strand, 14669076 - 14669115
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 129  Q
    ||||||||| ||||||||||||||||| ||||||||||||    
T  14669076 ctcgcgaggtgagagcctctgctcgccatggcgagttcag 14669115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 129
Target Start/End: Original strand, 14735434 - 14735473
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 129  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  14735434 ctcgcgaggcgagagcctctgctcgccattgcgagttcag 14735473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 141
Target Start/End: Complemental strand, 19725720 - 19725669
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaatccca 141  Q
    |||||||||||||||| |||||||||| |||||||| || || |||||||||    
T  19725720 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagtcagaatccca 19725669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Original strand, 22321965 - 22322000
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagt 125  Q
    |||||||||||||||| |||||||||||||||||||    
T  22321965 ctcgcgaggcgagagcatctgctcgccgtggcgagt 22322000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Original strand, 22337020 - 22337055
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagt 125  Q
    |||||||||||||||| |||||||||||||||||||    
T  22337020 ctcgcgaggcgagagcatctgctcgccgtggcgagt 22337055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Complemental strand, 27409452 - 27409417
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagt 125  Q
    |||||||||||||||| |||||||||||||||||||    
T  27409452 ctcgcgaggcgagagcatctgctcgccgtggcgagt 27409417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 43842572 - 43842643
Alignment:
Q  159 tcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||| ||||| ||||||  ||||||| ||||||||||| | |  ||||||||||||||||||| ||||    
T  43842572 tcaatctcatcctacattctttcctaatcattattagacatgctcaggcactcaaaagcatctaaggatcaa 43842643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 132
Target Start/End: Complemental strand, 49389446 - 49389407
Alignment:
Q  93 gcgaggcgagagcctctgctcgccgtggcgagttcaggtt 132  Q
    ||||||||||| |||||||||||| |||||||||||||||    
T  49389446 gcgaggcgagaacctctgctcgccatggcgagttcaggtt 49389407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 324549 - 324591
Alignment:
Q  89 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  324549 actcgcgaggcgagagcctctactcgctatggcgagttcaggt 324591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 132
Target Start/End: Original strand, 9513228 - 9513266
Alignment:
Q  94 cgaggcgagagcctctgctcgccgtggcgagttcaggtt 132  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  9513228 cgaggcgagagcctctgctcgccatggtgagttcaggtt 9513266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 132
Target Start/End: Original strand, 9521203 - 9521241
Alignment:
Q  94 cgaggcgagagcctctgctcgccgtggcgagttcaggtt 132  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  9521203 cgaggcgagagcctctgctcgccatggtgagttcaggtt 9521241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 14973245 - 14973319
Alignment:
Q  156 ggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||| |||||| | ||| ||||||  ||||||| ||||||||||||| |  ||||||||||||||||||| ||||    
T  14973245 ggtttaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaa 14973319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 42386725 - 42386767
Alignment:
Q  89 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    |||||||||| |||||||||| |||||| ||||||||||||||    
T  42386725 actcgcgaggtgagagcctctactcgccatggcgagttcaggt 42386767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 1465215 - 1465174
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    |||||||||||||||||||| |||||| |||| |||||||||    
T  1465215 ctcgcgaggcgagagcctctactcgccatggcaagttcaggt 1465174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 132
Target Start/End: Complemental strand, 12171909 - 12171868
Alignment:
Q  91 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggtt 132  Q
    ||||||||||||||||||| |||||| |||| ||||||||||    
T  12171909 tcgcgaggcgagagcctctactcgccatggccagttcaggtt 12171868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 127
Target Start/End: Complemental strand, 13210133 - 13210096
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttc 127  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  13210133 ctcgcgaggcgagagcctctactcgccatggcgagttc 13210096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 16097645 - 16097686
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    |||||||||||||||||||| ||| || ||||||||||||||    
T  16097645 ctcgcgaggcgagagcctctactcaccatggcgagttcaggt 16097686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 130
Target Start/End: Complemental strand, 37250973 - 37250932
Alignment:
Q  89 actcgcgaggcgagagcctctgctcgccgtggcgagttcagg 130  Q
    ||||||||||||||||||||| |||||  |||||||||||||    
T  37250973 actcgcgaggcgagagcctctactcgctatggcgagttcagg 37250932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 2050905 - 2050857
Alignment:
Q  182 ctaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||| ||||| |||||||||  ||||||||| ||||||||||||||    
T  2050905 ctaatcattattacacatgttgaggcactcaaaaacatctaaggttcaa 2050857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 22110156 - 22110116
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcagg 130  Q
    |||||||||||||||||||| |||||  |||||||||||||    
T  22110156 ctcgcgaggcgagagcctctactcgctatggcgagttcagg 22110116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 149; Significance: 8e-79; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 16505 - 16733
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| ||||||||| |||||||||||||  |||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  16505 aagtcttaatcctacccaagcgttcaactctcgagaaatcgtgcaacaaaggtcacaaaatccaacaagtcactctgtttctaggtcactcgcgaggcga 16604  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    |||||||||||||||||| ||||||| ||| | |||||||| ||||||||| ||||||||||||||||||| ||||||  ||||||| ||||||||||||    
T  16605 gagcctctgctcgccgtgccgagttctggtcaaaatcccataagtttaatttcaggttcaatctcgtcctacattctttcctaatcattattagacatgt 16704  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | |  ||||||||||||||||||||||||    
T  16705 tcaggcactcaaaagcatctaaggttcaa 16733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 149; Significance: 8e-79; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 27847728 - 27847500
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||||||||||||||||||||| | |||||| ||||||||||||||||| ||||||||||||||||| | |||||||||||||||||    
T  27847728 aagtcttaatcctacccaagggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttttgggtcactcgcgaggcga 27847629  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    ||||||||||| |||||||||||||||||| | |||||||| ||||||||||||||||||||||| ||||| ||||||  |||||||  |||||||||||    
T  27847628 gagcctctgcttgccgtggcgagttcaggtcaaaatcccataagtttaattccaggttcaatctcatcctaaattctttcctaatcataattagacatgt 27847529  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | |  ||||||||||||||||||||||||    
T  27847528 tcaggcactcaaaagcatctaaggttcaa 27847500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 40443615 - 40443842
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| ||||||||||||||| |||||||| | |||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  40443615 aagtcttaatcctacccaagggttcatctctcgacaactcgtgcaacaaaggtcgcaaaatccaataagtcactctgtttctgggtcactcgcgaggcga 40443714  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    |||||||||||||||||||||||||||||| ||||||||| ||  |||||||||||||||||||| ||||| ||||||  ||||||| ||||||||||||    
T  40443715 gagcctctgctcgccgtggcgagttcaggtcagaatccca-caagttaattccaggttcaatctcatcctaaattctttcctaatcattattagacatgt 40443813  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | |  ||||||||||||||||||||||||    
T  40443814 tcaggcactcaaaagcatctaaggttcaa 40443842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 16386142 - 16385914
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    ||||||||||  ||||||| ||||||||||| ||| | || ||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  16386142 aagtcttaatgttacccaaaggttcaactctggacaactcatgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcgaggcga 16386043  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    ||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||| ||||||  ||||||| ||||||||||||    
T  16386042 gagccactgctcgccgtggcgagttcaggttagaatcccacaagtttaattccaggttcaatctcatcctacattctttcctaatcattattagacatgt 16385943  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | |  ||||||||||||||||||||||||    
T  16385942 tcaggcactcaaaagcatctaaggttcaa 16385914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 9509415 - 9509654
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| ||| || | ||||||||||||||| | || ||| ||||||||||||||||| |||||| |||||||||||| |||||||||||||||||    
T  9509415 aagtcttaatgctatcccaaggttcaactctcgacaactcttgcaacaaaggtcgcaaaatctaacaaggcactctgtttctgggtcactcgcgaggcga 9509514  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaa-----------ttccaggttcaatctcgtcctatattcttcactaatcaat 190  Q
    |||||||| ||||||||||||||||||||| |||||||||  ||||| |           |||||||||||||||| ||||| ||||||  ||||||| |    
T  9509515 gagcctctcctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcatt 9509614  T
Q  191 attagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||| |  ||||||||||||||||||| ||||    
T  9509615 attagacatgttcaggcactcaaaagcatctaaggatcaa 9509654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 26212222 - 26212450
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgttt-ctcggtcactcgcgaggcg 100  Q
    |||||||||| |||||||| |||| ||  ||| || | |||||| ||||||||||||||| | ||||| ||||||||||| || ||||||||||||||||    
T  26212222 aagtcttaatgctacccaaaggtttaatcctcaacaactcgtgcaacaaaggtcgcaaaa-ctaacaaatcactctgttttctgggtcactcgcgaggcg 26212320  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatg 200  Q
    ||||||||| ||||||||||||||||||||| |||| | ||  ||||| ||||||||||||||||| ||||| ||||||  ||||| |||||||||||||    
T  26212321 agagcctctactcgccgtggcgagttcaggtcagaacctcacaagtttcattccaggttcaatctcatcctacattcttacctaataaatattagacatg 26212420  T
Q  201 ttgaaacactcaaaagcatctaaggttcaa 230  Q
    || |  |||||||| |||||||||||||||    
T  26212421 ttcaggcactcaaaggcatctaaggttcaa 26212450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 5 - 230
Target Start/End: Original strand, 12699061 - 12699297
Alignment:
Q  5 tcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagag 104  Q
    ||||||| |||||| | ||||||||| ||||| | |||||| ||||||||||||||| | ||||||||||| ||||||| |||||||| ||||| |||||    
T  12699061 tcttaatactaccccaaggttcaactatcgacaactcgtgcaacaaaggtcgcaaaacctaacaagtcactttgtttctgggtcactcacgaggtgagag 12699160  T
Q  105 cctctgctcgccgtggcgagttcaggttagaatcccatcagtttaa-----------ttccaggttcaatctcgtcctatattcttcactaatcaatatt 193  Q
    ||||||||||||||||||||||||||| |||||||||  ||||| |           ||||||||||||| || ||||| ||||||  ||||||| ||||    
T  12699161 cctctgctcgccgtggcgagttcaggtcagaatcccacgagtttcattcaacaatctttccaggttcaatttcatcctacattctttcctaatcattatt 12699260  T
Q  194 agacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||| |  ||||||||||||||||||| ||||    
T  12699261 agacatgttcaggcactcaaaagcatctaaggatcaa 12699297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 38227706 - 38227945
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    |||||||||| |||||| | |||||||||||  || | |||||| ||||||||||||||| || |||||| |||||||||| | ||||||||||||||||    
T  38227706 aagtcttaatactaccccaaggttcaactcttaacaactcgtgcaacaaaggtcgcaaaaacctaacaaggcactctgtttatgggtcactcgcgaggcg 38227805  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaa----------ttccaggttcaatctcgtcctatattcttcactaatcaat 190  Q
    ||||||||||||||||||||||||||||||| ||||||| |  ||||| |          |||||||||||||||| | ||| ||||||  ||||||| |    
T  38227806 agagcctctgctcgccgtggcgagttcaggtcagaatccaaaaagtttcattctaaatctttccaggttcaatctcattctacattctttcctaatcatt 38227905  T
Q  191 attagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||| |  ||||||||||||||||||| ||||    
T  38227906 attagacatgttcaggcactcaaaagcatctaaggatcaa 38227945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 10589264 - 10589386
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||||| ||| ||||||| ||| | |||||| | ||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  10589264 aagtcttaatcctacccaaaggtccaactctagacaactcgtgcaaaaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcgaggcga 10589363  T
Q  102 gagcctctgctcgccgtggcgag 124  Q
    |||||||||||||||||||||||    
T  10589364 gagcctctgctcgccgtggcgag 10589386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 3564259 - 3564026
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    |||||| ||| |||||| | |||| ||||||  || | |||||| |||||||||||||||||| |||||| |||||||||||| ||||||||||||||||    
T  3564259 aagtctcaatactaccccaaggttaaactcttaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcg 3564160  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaatcccatcagtt----------taattccaggttcaatctcgtcctatattcttcactaatcaat 190  Q
    ||||| | ||||||| ||||||||||||||| ||| | |||  ||||          |  |||||||||||||||| ||||| ||||||  ||||||| |    
T  3564159 agagcatttgctcgctgtggcgagttcaggtcagatttccaaaagttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcatt 3564060  T
Q  191 attagacatgttgaaacactcaaaagcatctaag 224  Q
    |||||||||||| |  ||||||||||||||||||    
T  3564059 attagacatgttcaggcactcaaaagcatctaag 3564026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 40 - 226
Target Start/End: Complemental strand, 15143894 - 15143697
Alignment:
Q  40 tcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaatc 138  Q
    |||||| |||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| ||||||    
T  15143894 tcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctaggtcactcgcgaggcgagagcctctgctcgccatggcgagtacaggtcagaatc 15143795  T
Q  139 cca-----tcagtttaa-----ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggt 226  Q
     ||     ||| | |||     |||||||||||||||| | ||| | ||||  ||||||| ||||||||||||| |  |||||||| |||||||||||    
T  15143794 acaaaagttcattctaaaatctttccaggttcaatctcattctaaaatctttcctaatcattattagacatgttcaggcactcaaaggcatctaaggt 15143697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 13 - 230
Target Start/End: Complemental strand, 17061844 - 17061616
Alignment:
Q  13 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctg 110  Q
    |||||| | |||||||||||| |||| ||||||||||||| |||||||||||  |||||| || |||||   | |||||||||||||||||||||||||     
T  17061844 ctaccccatggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattctgtaaataggtcactcgcgaggcgagagcctcta 17061746  T
Q  111 ctcgccgtggcgagttcaggttagaatcccatcagtttaattc-----------caggttcaatctcgtcctatattcttcactaatcaatattagacat 199  Q
    |||||| | |||||||||||| ||| || ||  ||||| ||||           ||||||||||||| | ||| ||||||  ||||||| ||||| ||||    
T  17061745 ctcgccatcgcgagttcaggtcagattctcaa-agttttattctaaaatctatccaggttcaatctcattctacattctttcctaatcattattaaacat 17061647  T
Q  200 gttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||| |  ||||||||||||||||||| ||||    
T  17061646 gttcaggcactcaaaagcatctaaggatcaa 17061616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 2832037 - 2831962
Alignment:
Q  155 aggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||| ||||| ||||||  ||||||||||||||||||||| |  |||||||| |||||||||||||||    
T  2832037 aggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaaggcatctaaggttcaa 2831962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 9751285 - 9751206
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||| ||| ||||| ||||||  ||||||||||||||||||||| |  |||||||| |||||||||||||||    
T  9751285 ttccaggttcaacctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaaggcatctaaggttcaa 9751206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 39267381 - 39267302
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||||||| ||||| ||||||  ||||||||||||||||||||| |  |||||||| |||| ||||||||||    
T  39267381 ttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaaggcatataaggttcaa 39267302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 86 - 141
Target Start/End: Original strand, 44116816 - 44116871
Alignment:
Q  86 gtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaatccca 141  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||    
T  44116816 gtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattccca 44116871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 15754622 - 15754543
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||||||| | |||  |||||  ||||||| ||||||||||||| |  ||||||||||||||||||||||||    
T  15754622 ttccaggttcaatctcattctactttctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaa 15754543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 18302564 - 18302643
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||||||| ||||| ||||||  ||||| ||||||||||||||| |  |||||||  |||||||||||||||    
T  18302564 ttccaggttcaatctcatcctacattctttcctaataaatattagacatgttcaggcactcaagggcatctaaggttcaa 18302643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 230
Target Start/End: Complemental strand, 28505033 - 28504957
Alignment:
Q  154 caggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||||||| | ||| ||||||  ||||||| ||||||||||||| |  ||||||||| ||||||||||||||    
T  28505033 caggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggttcaa 28504957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 34201172 - 34201248
Alignment:
Q  154 caggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||||||| | ||| ||||||   | |||| ||||||||||||| | |||||||||||||||||||||||||    
T  34201172 caggttcaatctcattctaaattctttcttgatcattattagacatgttcagacactcaaaagcatctaaggttcaa 34201248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 129
Target Start/End: Original strand, 18302494 - 18302533
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 129  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  18302494 ctcgcgaggcgagagcctctgctcgccatggcgagttcag 18302533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 810936 - 810894
Alignment:
Q  89 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    ||||||||||||||||||||| |||||| ||||||||||||||    
T  810936 actcgcgaggcgagagcctctactcgccatggcgagttcaggt 810894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 12255664 - 12255556
Alignment:
Q  24 ttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggc 121  Q
    |||||||||| || | ||||| ||||||| |||||||||||  |||||| || |||||  || ||  ||||||||||||||||||||| |||||  ||||    
T  12255664 ttcaactctcaacaactcgtgtgacaaagatcgcaaaatcctaaacaag-cattctgtaactgggaaactcgcgaggcgagagcctctactcgctatggc 12255566  T
Q  122 gagttcaggt 131  Q
    ||||||||||    
T  12255565 gagttcaggt 12255556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 230
Target Start/End: Complemental strand, 12756451 - 12756373
Alignment:
Q  152 tccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||||||||| | ||| ||||||  ||||||| ||||| ||||||| |  ||||||||||||||||||| ||||    
T  12756451 tccaggttcaatctcattctacattctttcctaatcattattaaacatgttcaggcactcaaaagcatctaaggatcaa 12756373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 12756600 - 12756481
Alignment:
Q  13 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctg 110  Q
    |||||| | |||||||||||| |||| ||||||||||||| |||||||||||  |||||| |  | |||   | ||  |||||||||||||||||||||     
T  12756600 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaaggc-ttttgtaattgggcaactcgcgaggcgagagcctcta 12756502  T
Q  111 ctcgccgtggcgagttcaggt 131  Q
    |||||| ||| ||||||||||    
T  12756501 ctcgccatggtgagttcaggt 12756481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 127
Target Start/End: Complemental strand, 28505106 - 28505069
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttc 127  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  28505106 ctcgcgaggcgagagcctctgctcgccatggcgagttc 28505069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 129
Target Start/End: Complemental strand, 2832110 - 2832071
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 129  Q
    ||||||||||||||||||||||||||| ||| ||||||||    
T  2832110 ctcgcgaggcgagagcctctgctcgccatggtgagttcag 2832071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 129
Target Start/End: Complemental strand, 9389501 - 9389462
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 129  Q
    |||||||||||||||||||| |||||| ||||||||||||    
T  9389501 ctcgcgaggcgagagcctctactcgccatggcgagttcag 9389462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 129
Target Start/End: Complemental strand, 9751355 - 9751316
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 129  Q
    |||||||||||||||||||||||| || ||||||||||||    
T  9751355 ctcgcgaggcgagagcctctgctcaccatggcgagttcag 9751316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 129
Target Start/End: Complemental strand, 11995835 - 11995796
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 129  Q
    ||||||||||||||||||||||| ||| ||||||||||||    
T  11995835 ctcgcgaggcgagagcctctgcttgccatggcgagttcag 11995796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Original strand, 12718966 - 12719001
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagt 125  Q
    |||||||||||||||| |||||||||||||||||||    
T  12718966 ctcgcgaggcgagagcatctgctcgccgtggcgagt 12719001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Original strand, 12723877 - 12723912
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagt 125  Q
    |||||||||||||||| |||||||||||||||||||    
T  12723877 ctcgcgaggcgagagcatctgctcgccgtggcgagt 12723912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Complemental strand, 16907009 - 16906974
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagt 125  Q
    |||||||||||||||| |||||||||||||||||||    
T  16907009 ctcgcgaggcgagagcatctgctcgccgtggcgagt 16906974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Original strand, 18279701 - 18279736
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagt 125  Q
    |||||||||||||||| |||||||||||||||||||    
T  18279701 ctcgcgaggcgagagcatctgctcgccgtggcgagt 18279736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Original strand, 18283664 - 18283699
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagt 125  Q
    |||||||||||||||| |||||||||||||||||||    
T  18283664 ctcgcgaggcgagagcatctgctcgccgtggcgagt 18283699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 129
Target Start/End: Original strand, 34201099 - 34201138
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 129  Q
    |||||||||| |||||||||||||||| ||||||||||||    
T  34201099 ctcgcgaggcaagagcctctgctcgccatggcgagttcag 34201138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 129
Target Start/End: Complemental strand, 39267447 - 39267412
Alignment:
Q  94 cgaggcgagagcctctgctcgccgtggcgagttcag 129  Q
    ||||||||||||||||||||||| ||||||||||||    
T  39267447 cgaggcgagagcctctgctcgccatggcgagttcag 39267412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 128
Target Start/End: Original strand, 68061 - 68099
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttca 128  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  68061 ctcgcgaggcgagagcctctactcgccatggcgagttca 68099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 16056642 - 16056684
Alignment:
Q  89 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  16056642 actcgcgaggcgagagcctctactcgctatggcgagttcaggt 16056684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 22073230 - 22073272
Alignment:
Q  89 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    |||||||||||||| |||||| |||||| ||||||||||||||    
T  22073230 actcgcgaggcgagggcctctactcgccatggcgagttcaggt 22073272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 44014489 - 44014530
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    |||||||||||||||||||| ||| || ||||||||||||||    
T  44014489 ctcgcgaggcgagagcctctactcaccatggcgagttcaggt 44014530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 11995762 - 11995714
Alignment:
Q  182 ctaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||| ||||||||||||| |  ||||||||| ||||||||||||||    
T  11995762 ctaatcattattagacatgttcaggcactcaaaaacatctaaggttcaa 11995714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 230
Target Start/End: Complemental strand, 16219452 - 16219372
Alignment:
Q  150 attccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||||||||   ||| | ||||  ||||||| ||||| ||| ||| | |||||||||| ||||||||||||||    
T  16219452 attccaggttcaatctcaatctaaaatctttcctaatcattattatacaagtttagacactcaaaaacatctaaggttcaa 16219372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 47832225 - 47832273
Alignment:
Q  182 ctaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||| ||||||||||||| |  ||||||||| ||||||||||||||    
T  47832225 ctaatcattattagacatgttcaggcactcaaaaacatctaaggttcaa 47832273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 944 - 716
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||||| ||||||||||||||| | |||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  944 aagtcttaatgctacccaaaggttcaactctcgacaattcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcgaggcga 845  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    |||||||||||||||||||||||||||||| |||||||||  ||||| | || |||||||||||| ||||| ||||||  ||||||| ||||||||||||    
T  844 gagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcaatctaggttcaatctcatcctaaattctttcctaatcattattagacatgt 745  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | |  ||||||||||||||||||||||||    
T  744 tcaggcactcaaaagcatctaaggttcaa 716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 6 - 230
Target Start/End: Complemental strand, 943 - 719
Alignment:
Q  6 cttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagc 105  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||||||| ||| |||||||||||||||||    
T  943 cttaatcctacccaagggttcaactctcgacaaatcgtgcaacaaaggttgcaaaatctaacaagtcactctgtttctgggttactcgcgaggcgagagc 844  T
Q  106 ctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaa 205  Q
    |||||||||||||||||||||||||| ||||| |||  ||||||||||||||||||||||| ||||| ||||||  ||||||| |||||||||| || |     
T  843 ctctgctcgccgtggcgagttcaggtcagaattccacaagtttaattccaggttcaatctcatcctacattctttcctaatcattattagacatattcag 744  T
Q  206 acactcaaaagcatctaaggttcaa 230  Q
     ||||||||||||||||||||||||    
T  743 gcactcaaaagcatctaaggttcaa 719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 145; Significance: 2e-76; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 1512 - 1740
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||||||||| ||||||||||| | |||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  1512 aagtcttaatcctacccaagggtccaactctcgacaactcgtgcaacaaaggtcgcaaactccaacaagtcactctgtttctaggtcactcgcgaggcga 1611  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    ||||||||||||||||| |||||||||| ||||||| |||| ||||||||||||||||||||| |||||||   | ||||||||||||||||||||||||    
T  1612 gagcctctgctcgccgtcgcgagttcagtttagaattccataagtttaattccaggttcaatcacgtcctaccctattcactaatcaatattagacatgt 1711  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | |  ||| ||||||||||||| ||||||    
T  1712 tcaggcacgcaaaagcatctaacgttcaa 1740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 7489 - 7717
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||||||||| ||||||||||| | |||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  7489 aagtcttaatcctacccaagggtccaactctcgacaactcgtgcaacaaaggtcgcaaactccaacaagtcactctgtttctaggtcactcgcgaggcga 7588  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    ||||||||||||||||| |||||||||| ||||||| |||| ||||||||||||||||||||| |||||||   | ||||||||||||||||||||||||    
T  7589 gagcctctgctcgccgtcgcgagttcagtttagaattccataagtttaattccaggttcaatcacgtcctaccctattcactaatcaatattagacatgt 7688  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | |  ||| ||||||||||||| ||||||    
T  7689 tcaggcacgcaaaagcatctaacgttcaa 7717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 145; Significance: 2e-76; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 167874 - 167646
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||||| ||||||||||||||| | |||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  167874 aagtcttaatgctacccaaaggttcaactctcgacaattcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcgaggcga 167775  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    |||||||||||||||||||||||||||||| |||||||||  ||||| | || |||||||||||| ||||| ||||||  ||||||| ||||||||||||    
T  167774 gagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcaatctaggttcaatctcatcctaaattctttcctaatcattattagacatgt 167675  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | |  ||||||||||||||||||||||||    
T  167674 tcaggcactcaaaagcatctaaggttcaa 167646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 52139 - 52377
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||| | |||||||||||| || | |||||| |||| |||||||||| | |||||| ||||| |||||| |||||||||||||||||    
T  52139 aagtcttaatactaccccaaggttcaactctcaacaactcgtgcaacaa-ggtcgcaaaacctaacaagacactcagtttctgggtcactcgcgaggcga 52237  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaa-----------ttccaggttcaatctcgtcctatattcttcactaatcaat 190  Q
    |||||||||||||||||||||||||||||| |||||||||  ||||| |           |||||||||||||||| ||||| ||||||  ||||||| |    
T  52238 gagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcatt 52337  T
Q  191 attagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||| |  ||||||||||||||||||| ||||    
T  52338 attagacatgttcaggcactcaaaagcatctaaggatcaa 52377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 141; Significance: 4e-74; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 14053197 - 14052969
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||||||||||||||||||||| | |||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||    
T  14053197 aagtcttaatcctacccaagggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcaaggcga 14053098  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    ||||||||||||||| ||| |||||||||| |||||||||  |||||||||||| |||||||||| ||||| ||||||  ||||||| |||||||||| |    
T  14053097 gagcctctgctcgccatggtgagttcaggtcagaatcccacaagtttaattccaagttcaatctcatcctacattctttcctaatcattattagacatat 14052998  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | |  ||||||||||||||||||||||||    
T  14052997 tcaggcactcaaaagcatctaaggttcaa 14052969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 3096880 - 3097094
Alignment:
Q  13 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgct 112  Q
    |||||||| ||||||||||||||| | |||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3096880 ctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgct 3096979  T
Q  113 cgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactca 212  Q
    |||| |||||||||||||| |||||||||  ||||| ||||||||||||||||| ||||| ||||||  ||||||| ||||||||||||| |  |||||     
T  3096980 cgccttggcgagttcaggtcagaatcccacaagtttcattccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcg 3097079  T
Q  213 aaagcatctaaggtt 227  Q
    ||| |||||||||||    
T  3097080 aaaacatctaaggtt 3097094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 7089103 - 7089331
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||| ||| ||||||||||||||| | || ||| ||||||||||||||||| |||||| |||||||||||  |||||||||||||||||    
T  7089103 aagtcttaatgctactcaaaggttcaactctcgacaactcttgcaacaaaggtcgcaaaatctaacaagacactctgtttccgggtcactcgcgaggcga 7089202  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    ||||||||||||||| |||||||||||||| |||||||||| ||||| ||||||||||||||||| ||||| ||||||  ||||||| ||||||||||||    
T  7089203 gagcctctgctcgccatggcgagttcaggtcagaatcccataagtttcattccaggttcaatctcatcctacattctttcctaatcattattagacatgt 7089302  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | |  |||||| | |||||||||||||||    
T  7089303 tcaggcactcataggcatctaaggttcaa 7089331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 12902983 - 12903210
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||||| |||||||||||| ||   |||||| ||||||||||||||||| |||||| |||||||||||| ||||||||||||||||     
T  12902983 aagtcttaatcctacccaaaggttcaactctcaacagctcgtgcaacaaaggtcgcaaaatctaacaaggcactctgtttctgggtcactcgcgaggcgg 12903082  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    |||||||| ||||||||||||||||||||| |||||||||  ||||| ||||||||||||||||| ||||| ||||||  ||||||| ||||||||||||    
T  12903083 gagcctctactcgccgtggcgagttcaggtcagaatcccacaagtttcattccaggttcaatctcatcctacattctttcctaatcattattagacatgt 12903182  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | |  ||||| ||||||||||||||||||    
T  12903183 tcaggcactc-aaagcatctaaggttcaa 12903210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 17047967 - 17047740
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||||| |||||||||||| || | |||||| |||||||||||||| ||  ||||| |||||||||||  |||||||||||||||||    
T  17047967 aagtcttaatactacccaaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaagtctcacaaggcactctgtttccgggtcactcgcgaggcga 17047868  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    ||||||||||||||| |||||||||||||| |||||||||  ||||| |||||| |||||||||| ||||| ||| ||  ||||||| |||||| |||||    
T  17047867 gagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttcattcca-gttcaatctcatcctacattttttcctaatcattattagtcatgt 17047769  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | |  ||||||||  ||||||||||||||    
T  17047768 tcaggcactcaaagacatctaaggttcaa 17047740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 44053055 - 44053294
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| ||| || | ||||||||||||||| | |||||| ||||||||||||||||| |||||| |||||||||||| |||||||||||||||||    
T  44053055 aagtcttaatgctatcccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaaggcactctgtttctgggtcactcgcgaggcga 44053154  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaa-----------ttccaggttcaatctcgtcctatattcttcactaatcaat 190  Q
    ||| |||||||||||||||||||||||||| |||||||||  ||||| |           || ||||||||||||| ||||| ||||||  | ||||| |    
T  44053155 gagtctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcatcctataatctttacaggttcaatctcatcctacattctttcccaatcatt 44053254  T
Q  191 attagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||| | |||||||||||||||||||| ||||    
T  44053255 attagacatgttcagacactcaaaagcatctaaggatcaa 44053294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 22636660 - 22636899
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||| | ||||||| |||| || | |||||| ||||||||||||||| | |||||| |||||||||||| ||||||||| |||||||    
T  22636660 aagtcttaatactaccccaaggttcaattctcaacaactcgtgcaacaaaggtcgcaaaacctaacaagacactctgtttctgggtcactcgtgaggcga 22636759  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaa-----------ttccaggttcaatctcgtcctatattcttcactaatcaat 190  Q
    ||||||||||||||||||||||| ||| || |||||||||  ||||| |           |||||||||||||||| ||||| ||||||  ||||||| |    
T  22636760 gagcctctgctcgccgtggcgaggtcaagtcagaatcccacaagtttcattctacaatttttccaggttcaatctcatcctacattctttcctaatcatt 22636859  T
Q  191 attagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||| || | |||||||||||||||||||| ||||    
T  22636860 attagacatcttcagacactcaaaagcatctaaggatcaa 22636899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 23374254 - 23374125
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||||| |||| ||  ||| || | |||||| |||||||| |||||||| ||||||||||||||||||| |||||| ||||||||||    
T  23374254 aagtcttaatgctacccaaaggtttaatcctcaacaactcgtgcaacaaaggttgcaaaatctaacaagtcactctgtttctgggtcacccgcgaggcga 23374155  T
Q  102 gagcctctgctcgccgtggcgagttcaggt 131  Q
    ||||||||||||||||||||||||||||||    
T  23374154 gagcctctgctcgccgtggcgagttcaggt 23374125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 42 - 223
Target Start/End: Original strand, 15091162 - 15091355
Alignment:
Q  42 gtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaatccc 140  Q
    |||||||| || ||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||    
T  15091162 gtgcgacacagatcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttcc 15091261  T
Q  141 atcagtttaa-----------ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaa 223  Q
    |  ||||| |           |||||||||||||||| | ||| ||||||  ||||||||||||||||||||| | | ||||||||||||||||    
T  15091262 aaaagtttcattctaaaatccttccaggttcaatctcattctacattctttcctaatcaatattagacatgttcagaaactcaaaagcatctaa 15091355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 40 - 230
Target Start/End: Complemental strand, 16377379 - 16377178
Alignment:
Q  40 tcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaatc 138  Q
    |||||| |||||||| ||||||||| |||||| |||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||    
T  16377379 tcgtgcaacaaaggtagcaaaatcctaacaaggcactatgtttctgggtcactcgtgaggcgagagcctctgctcgccgtggcgagttcaggtcagattc 16377280  T
Q  139 ccatcagtt----------taattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttc 228  Q
    |||  ||||          | ||||||||||||||||| ||||| ||| ||  ||||||| ||||||||||||| | || ||||||||||||||||| ||    
T  16377279 ccaaaagttcattctacgatcattccaggttcaatctcatcctacattatttcctaatcattattagacatgttcagacgctcaaaagcatctaaggatc 16377180  T
Q  229 aa 230  Q
    ||    
T  16377179 aa 16377178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 7893926 - 7894066
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    ||||||||||  ||||| | ||||||||||||| | | || ||| ||||||||||||||| || |||||| | |||||||||| ||||||||| ||||||    
T  7893926 aagtcttaatattaccccaaggttcaactctcggcaactcatgcaacaaaggtcgcaaaaacctaacaagactctctgtttctgggtcactcgtgaggcg 7894025  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaatccca 141  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  7894026 agagcctctgctcgccgtggcgagttcaggtcagaatccca 7894066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 47 - 137
Target Start/End: Original strand, 7798968 - 7799058
Alignment:
Q  47 acaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaat 137  Q
    ||||||||||||||| | |||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7798968 acaaaggtcgcaaaacctaacaagacactttgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaat 7799058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 42 - 230
Target Start/End: Original strand, 14038914 - 14039114
Alignment:
Q  42 gtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaatccc 140  Q
    |||||||| || ||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||| | ||    
T  14038914 gtgcgacacagatcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttctggtcagatttcc 14039013  T
Q  141 atcagtttaattcca-----------ggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttca 229  Q
    |  ||||| |||| |           ||||||||||| | ||| ||||||  | ||||| ||||||||||||| |  ||||||||||||||||||| |||    
T  14039014 aaaagtttcattctaaaatctttctaggttcaatctcattctacattctttccaaatcattattagacatgttcaggcactcaaaagcatctaaggatca 14039113  T
Q  230 a 230  Q
    |    
T  14039114 a 14039114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 141
Target Start/End: Complemental strand, 44928798 - 44928678
Alignment:
Q  22 ggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtg 119  Q
    |||||||||||| |||| ||||||||||||| |||||||||||  |||||| || |||||  || |||||||||||||||||||||||||||||||| ||    
T  44928798 ggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattctgtaactgggtcactcgcgaggcgagagcctctgctcgccatg 44928700  T
Q  120 gcgagttcaggttagaatccca 141  Q
    |||||||| ||| ||| |||||    
T  44928699 gcgagttctggtcagattccca 44928678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 16239865 - 16239764
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    |||||||||| |||||| |  ||||||||||| || | |||||| ||||||||||||||| || ||||||||||||||||||| ||||||||||||||||    
T  16239865 aagtcttaatactaccccaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagtcactctgtttctgggtcactcgcgaggcg 16239766  T
Q  101 ag 102  Q
    ||    
T  16239765 ag 16239764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 22 - 230
Target Start/End: Original strand, 44102456 - 44102674
Alignment:
Q  22 ggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtg 119  Q
    |||||||||||| |||| |||||| |||||| |||||||||||  ||||||| | |||||   | |||||||||||||||||||||||||||||||| ||    
T  44102456 ggttcaactctcaacgactcgtgctacaaagatcgcaaaatcctaaacaagt-attctgtaaataggtcactcgcgaggcgagagcctctgctcgccatg 44102554  T
Q  120 gcgagttcaggttagaatcccatcagtttaattc-----------caggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaaca 208  Q
    |||||||||||| ||| || ||  ||||| ||||           ||||||||||||| ||||| |||||||| |||||| ||||| ||||| | |  ||    
T  44102555 gcgagttcaggtcagattctcaa-agttttattctaaaatctatccaggttcaatctcatcctacattcttca-taatcattattaaacatgctcaggca 44102652  T
Q  209 ctcaaaagcatctaaggttcaa 230  Q
    ||||||||||||||||| ||||    
T  44102653 ctcaaaagcatctaaggatcaa 44102674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 6190687 - 6190782
Alignment:
Q  1 caagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcga 96  Q
    ||||||||||| |||| | | |||||||||||||||   |||||| ||||||||||||||||| ||||||||||||| ||| | ||||||||||||    
T  6190687 caagtcttaatgctacgccaaggttcaactctcgacagctcgtgcaacaaaggtcgcaaaatctaacaagtcactctatttttgggtcactcgcga 6190782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 13812544 - 13812465
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||||||| ||||| ||| ||  ||||||||||||||||||||| | ||||||||| |||||||||||||||    
T  13812544 ttccaggttcaatctcatcctacattatttcctaatcaatattagacatgttcagacactcaaaggcatctaaggttcaa 13812465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 16597031 - 16597110
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||||||| | ||| ||||||  ||||||| ||||||||||||| |  ||||||||||||||||||||||||    
T  16597031 ttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaa 16597110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 225
Target Start/End: Complemental strand, 20157025 - 20156951
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaagg 225  Q
    |||||||||||||||| ||||| ||||||  ||||||||||||||||||||| |  |||||||| ||||||||||    
T  20157025 ttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaaggcatctaagg 20156951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 89 - 132
Target Start/End: Original strand, 12774313 - 12774356
Alignment:
Q  89 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtt 132  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  12774313 actcgcgaggcgagagcctctgctcgccatggcgagttcaggtt 12774356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 15552199 - 15552278
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||| ||||||| ||||| ||||||  ||||||| ||||||||||||| |  ||||||||||||| ||||||||||    
T  15552199 ttccaggtccaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatataaggttcaa 15552278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 22633948 - 22633869
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||||||| ||||| ||||||  ||||||||||||||||||||| |  |||||||  |||||||| ||||||    
T  22633948 ttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaagggcatctaaagttcaa 22633869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 24029127 - 24029206
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||||||| ||||| ||||||   |||||||||||||||||||| |  ||||||||  ||||||||||||||    
T  24029127 ttccaggttcaatctcatcctacattctttcataatcaatattagacatgttcaggcactcaaagacatctaaggttcaa 24029206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 131
Target Start/End: Complemental strand, 52243067 - 52242958
Alignment:
Q  23 gttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtgg 120  Q
    ||||||||||  |||| ||||||||||||| |||||||||||  |||||| || |||||  || ||  ||||||||||||||||||||| |||||  |||    
T  52243067 gttcaactctttacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattctgtaactgggcaactcgcgaggcgagagcctctactcgctatgg 52242969  T
Q  121 cgagttcaggt 131  Q
    |||||||||||    
T  52242968 cgagttcaggt 52242958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 129
Target Start/End: Original strand, 3332201 - 3332240
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 129  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  3332201 ctcgcgaggcgagagcctctgctcgccatggcgagttcag 3332240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 6190819 - 6190898
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||||||| ||||| |||||   ||||||| ||||| ||||||| |  ||||||||||||||||||| ||||    
T  6190819 ttccaggttcaatctcatcctacattctctcctaatcattattaaacatgttcaggcactcaaaagcatctaaggatcaa 6190898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 129
Target Start/End: Original strand, 24029057 - 24029096
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 129  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  24029057 ctcgcgaggcgagagcctctgctcgccatggcgagttcag 24029096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 21815438 - 21815396
Alignment:
Q  89 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    ||||||||||||||||||||| |||||| ||||||||||||||    
T  21815438 actcgcgaggcgagagcctctactcgccatggcgagttcaggt 21815396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 128
Target Start/End: Complemental strand, 22634018 - 22633980
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttca 128  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  22634018 ctcgcgaggcgagagcctctgctcgccatggcgagttca 22633980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 15099665 - 15099706
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  15099665 ctcgcgaggcgagagcctctactcgccatggcgagttcaggt 15099706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 127
Target Start/End: Original strand, 15552129 - 15552166
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttc 127  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  15552129 ctcgcgaggcgcgagcctctgctcgccgtggcgagttc 15552166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 126
Target Start/End: Complemental strand, 13812614 - 13812578
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagtt 126  Q
    ||||||||||||||||||||||||||| |||||||||    
T  13812614 ctcgcgaggcgagagcctctgctcgccatggcgagtt 13812578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 15464785 - 15464694
Alignment:
Q  42 gtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    ||||||||||| | |||||||||  ||||||||| |||||  || ||  ||||||||||||||||||||| |||||  ||| ||||||||||    
T  15464785 gtgcgacaaagattgcaaaatcctaaacaagtcattctgtaactgggcaactcgcgaggcgagagcctctactcgctatggtgagttcaggt 15464694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Complemental strand, 4561142 - 4561107
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagt 125  Q
    |||||||||||||||| |||||||||||||||||||    
T  4561142 ctcgcgaggcgagagcatctgctcgccgtggcgagt 4561107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Complemental strand, 5756746 - 5756711
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagt 125  Q
    |||||||||||||||| |||||||||||||||||||    
T  5756746 ctcgcgaggcgagagcatctgctcgccgtggcgagt 5756711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 7799083 - 7799162
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||||||| ||||| ||| |   ||||||| |||||| |||||| |  ||||||||||||||||||| ||||    
T  7799083 ttccaggttcaatctcatcctacattatgtcctaatcattattagtcatgttcaggcactcaaaagcatctaaggatcaa 7799162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 225
Target Start/End: Complemental strand, 16239728 - 16239653
Alignment:
Q  151 ttccaggttcaatctcgtcctatatt-cttcactaatcaatattagacatgttgaaacactcaaaagcatctaagg 225  Q
    |||||||||||||||| | ||| ||| |||  ||||||| ||||||||||||| |  |||||||||||||||||||    
T  16239728 ttccaggttcaatctcattctacatttctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 16239653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 129
Target Start/End: Complemental strand, 20157095 - 20157056
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 129  Q
    |||||||||||||||||||||| |||| ||||||||||||    
T  20157095 ctcgcgaggcgagagcctctgcacgccatggcgagttcag 20157056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 128
Target Start/End: Complemental strand, 21815109 - 21815070
Alignment:
Q  89 actcgcgaggcgagagcctctgctcgccgtggcgagttca 128  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  21815109 actcgcgaggcgagagcctctactcgccatggcgagttca 21815070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 128
Target Start/End: Complemental strand, 21818531 - 21818492
Alignment:
Q  89 actcgcgaggcgagagcctctgctcgccgtggcgagttca 128  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  21818531 actcgcgaggcgagagcctctactcgccatggcgagttca 21818492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Original strand, 33742675 - 33742710
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagt 125  Q
    |||||||||||||||| |||||||||||||||||||    
T  33742675 ctcgcgaggcgagagcatctgctcgccgtggcgagt 33742710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 230
Target Start/End: Complemental strand, 21815037 - 21814959
Alignment:
Q  152 tccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||| | || | ||| ||||||  ||||||| ||||| ||||||| | |||||||||||||||||||| ||||    
T  21815037 tccaggttcattatcattctaaattctttcctaatcattattaaacatgttcagacactcaaaagcatctaaggatcaa 21814959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 230
Target Start/End: Complemental strand, 21818459 - 21818381
Alignment:
Q  152 tccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||| | || | ||| ||||||  ||||||| ||||| ||||||| | |||||||||||||||||||| ||||    
T  21818459 tccaggttcattatcattctaaattctttcctaatcattattaaacatgttcagacactcaaaagcatctaaggatcaa 21818381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 8846689 - 8846730
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    |||||||||||||||||||| |||||| ||||||||| ||||    
T  8846689 ctcgcgaggcgagagcctctactcgccatggcgagttaaggt 8846730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 13844956 - 13845004
Alignment:
Q  182 ctaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||  |||||||||||| | |||||||||| ||||||||||||||    
T  13844956 ctaatcataattagacatgttcagacactcaaaaacatctaaggttcaa 13845004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 21815336 - 21815288
Alignment:
Q  182 ctaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||| ||||| ||||||| | |||||||||||||||||||| ||||    
T  21815336 ctaatcattattaaacatgttcagacactcaaaagcatctaaggatcaa 21815288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 39705992 - 39705944
Alignment:
Q  182 ctaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||| ||||||||||||| |  ||||||||| ||||||||||||||    
T  39705992 ctaatcattattagacatgttcaggcactcaaaaacatctaaggttcaa 39705944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 39706092 - 39706052
Alignment:
Q  91 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  39706092 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 39706052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 141; Significance: 4e-74; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 20309331 - 20309559
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||||| ||||||||||| ||||||| |||||||||||||||||    
T  20309331 aagtcttaatcctacccaagggttcaactctcgacaaatcgtgcaacaagggtcgcaaaatctaacaagtcactttgtttctgggtcactcgcgaggcga 20309430  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    |||||||||||| ||||||||||||||||| |||||||||  ||||||||||||||||||||||| ||||| ||||||  ||||||| |||||||||| |    
T  20309431 gagcctctgctcaccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaatctcatcctacattctttcctaatcattattagacatat 20309530  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
      |  ||||||||||||| ||||||||||    
T  20309531 ccaggcactcaaaagcatataaggttcaa 20309559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 2 - 228
Target Start/End: Complemental strand, 38011 - 37785
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||||| ||||||||||||||| | |||||| |||||||||||||| || ||||||||||| ||||||| |||| ||||||||||||    
T  38011 aagtcttaatcctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaagtctaacaagtcactatgtttctgggtcgctcgcgaggcga 37912  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    ||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| ||||| ||  ||  ||||||| ||||||||||||    
T  37911 gagcctctgctcgccgtggcgagttcaggttagaatctcacaagtttaattccaggttcaatctcatcctacatcttttcctaatcattattagacatgt 37812  T
Q  202 tgaaacactcaaaagcatctaaggttc 228  Q
    | |  ||||||||||||||||||||||    
T  37811 tcaggcactcaaaagcatctaaggttc 37785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 23286087 - 23286315
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||||| |||||||||||| || | || ||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  23286087 aagtcttaatactacccaaaggttcaactctcaacaactcatgcaacaaaggtcgcaaaatctaacaagtcactctgtttctaggtcactcgcgaggcga 23286186  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    |||||||||||||||||||||||||||||| | |||| ||  | ||| |||||| |||||||||| ||||| ||||||  ||||||| ||||||||||||    
T  23286187 gagcctctgctcgccgtggcgagttcaggtcataatctcacaattttcattccatgttcaatctcatcctacattctttcctaatcattattagacatgt 23286286  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | | |||||||||||||||||||||||||    
T  23286287 tcagacactcaaaagcatctaaggttcaa 23286315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 23654281 - 23654066
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||||| ||||||||||||||| | |||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||          
T  23654281 aagtcttaatgctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcg------ 23654188  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
           |||||||||||||||||||| || ||||||||| |||||||||||||||||||||||| ||||| ||||||  ||||||| ||||||||||||    
T  23654187 -------tgctcgccgtggcgagttcaagtcagaatcccaacagtttaattccaggttcaatctcatcctacattctttcctaatcattattagacatgt 23654095  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | |  || |||||||||||||||||||||    
T  23654094 tcaggcagtcaaaagcatctaaggttcaa 23654066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 298709 - 298471
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||||| |||| ||  ||| || | |||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  298709 aagtcttaatgctacccaaaggtttaatcctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcgaggcga 298610  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaa----------ttccaggttcaatctcgtcctatattcttcactaatcaata 191  Q
    |||||||| ||||||||||||||||||||| |||||||||  ||||| |          |||||||||||||||| ||||||||||||  ||||||| ||    
T  298609 gagcctctactcgccgtggcgagttcaggtcagaatcccacaagtttcattctaaatctttccaggttcaatctcatcctatattctttcctaatcatta 298510  T
Q  192 ttagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||||| |  ||||||||||||||||||| ||||    
T  298509 ttagacatgttcaggcactcaaaagcatctaaggatcaa 298471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 32451825 - 32451585
Alignment:
Q  1 caagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    ||||||||||| |||||| | |||||| |||||||| | |||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  32451825 caagtcttaatgctaccccaaggttcatctctcgacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcgaggcg 32451726  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaa-----------ttccaggttcaatctcgtcctatattcttcactaatcaa 189  Q
    ||||||||||||||||||||||||||||||| |||||||||  ||||| |           ||||| |||||||||| ||||| |||||   |||||||     
T  32451725 agagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccatgttcaatctcatcctacattctctcctaatcat 32451626  T
Q  190 tattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||| ||||||| |  ||||||||||||||||||| ||||    
T  32451625 tattaaacatgttcaggcactcaaaagcatctaaggatcaa 32451585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 27753801 - 27754040
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| ||| || | | ||||||||||||| | |||||| || |||||||||||||| |||||| |||||||||||| ||||||| |||||||||    
T  27753801 aagtcttaatgctatcccaagcttcaactctcgacaactcgtgcaacgaaggtcgcaaaatctaacaaggcactctgtttctgggtcacttgcgaggcga 27753900  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaa-----------ttccaggttcaatctcgtcctatattcttcactaatcaat 190  Q
    |||||||||||||||||||||||||||||| |||||||||  ||||| |           |||||||||||||||| ||||| ||||||  ||||||| |    
T  27753901 gagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcatt 27754000  T
Q  191 attagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||||||||  ||||||||||||||||||| ||||    
T  27754001 attagacatgttgaggcactcaaaagcatctaaggatcaa 27754040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 22738075 - 22737836
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||| | ||||||| |||| || | |||||| ||||||||||||||| | |||||| |||||||||||| |||||||||||||||||    
T  22738075 aagtcttaatactaccccaaggttcaattctcaacaactcgtgcaacaaaggtcgcaaaacctaacaaggcactctgtttctaggtcactcgcgaggcga 22737976  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaa-----------ttccaggttcaatctcgtcctatattcttcactaatcaat 190  Q
    |||||||||||||||||||||||||||| | |||||||||  ||||| |           ||| |||||||||||| ||||| ||||||  ||||||| |    
T  22737975 gagcctctgctcgccgtggcgagttcagttcagaatcccacaagtttcattctacaatctttctaggttcaatctcatcctacattctttcctaatcatt 22737876  T
Q  191 attagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||| ||||| |  ||||||||||||||||||| ||||    
T  22737875 attagatatgttcaggcactcaaaagcatctaaggatcaa 22737836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 23 - 230
Target Start/End: Original strand, 23076689 - 23076905
Alignment:
Q  23 gttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggcg 122  Q
    ||||||||||| || | |||||| ||||||||||||||| | |||||| |||||||||||| ||| ||||||||||||||||||||| ||||||||||||    
T  23076689 gttcaactctcaacaactcgtgcaacaaaggtcgcaaaacctaacaaggcactctgtttctgggtaactcgcgaggcgagagcctctactcgccgtggcg 23076788  T
Q  123 agttcaggttagaatccca-----tcagtttaa----ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaa 213  Q
    ||||||||| ||||| |||     ||| | |||    |||||||| ||||||| ||||| ||||||  ||||| | ||||||||||||| |  |||||||    
T  23076789 agttcaggtcagaattccaaagtttcattctaaatctttccaggtccaatctcatcctacattctttcctaattattattagacatgttcaggcactcaa 23076888  T
Q  214 aagcatctaaggttcaa 230  Q
    |||||||||||| ||||    
T  23076889 aagcatctaaggatcaa 23076905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 22337341 - 22337580
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    |||||||||| |||| | | |||||||||||| || | |||||| ||||||||| ||||| || |||||| | |||||||||| ||||||||||||||||    
T  22337341 aagtcttaatactactccaaggttcaactctcaacaactcgtgcaacaaaggtcacaaaaacctaacaagactctctgtttctgggtcactcgcgaggcg 22337440  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaa----------ttccaggttcaatctcgtcctatattcttcactaatcaat 190  Q
    ||||||||| ||||||||||||| ||||||| ||||  | |  ||||| |          |||||||||||||||| ||||| ||||||  ||||||| |    
T  22337441 agagcctctactcgccgtggcgaattcaggtcagaactcaaaaagtttcattctaaatctttccaggttcaatctcatcctacattctttcctaatcatt 22337540  T
Q  191 attagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||| | |||||||||||||||||||| ||||    
T  22337541 attagacatgttcatacactcaaaagcatctaaggatcaa 22337580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 40 - 230
Target Start/End: Complemental strand, 22731090 - 22730889
Alignment:
Q  40 tcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaatcc 139  Q
    |||||| |||||| |||||||| | |||||| |||||||||||| ||| ||||| ||||||||||||| ||||| ||||||||||||||||| |||||||    
T  22731090 tcgtgcaacaaagatcgcaaaacctaacaaggcactctgtttctgggtgactcgtgaggcgagagcctttgctccccgtggcgagttcaggtcagaatcc 22730991  T
Q  140 catcagtttaa-----------ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttc 228  Q
    ||  ||||| |           |||||||||||||||| ||||| ||||||  ||||||| ||||||||||||| |  ||||||||||||||||||| ||    
T  22730990 cacaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatc 22730891  T
Q  229 aa 230  Q
    ||    
T  22730890 aa 22730889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 23660248 - 23660487
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    |||||| ||| |||||| | |||||||||||| |  | |||||| | ||||||| ||||| || |||||| |||||||||||| |||||||| |||||||    
T  23660248 aagtctcaatactaccccaaggttcaactctcaataactcgtgcaataaaggtcacaaaaacctaacaaggcactctgtttctgggtcactcacgaggcg 23660347  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaatccca-----tcagtttaa-----ttccaggttcaatctcgtcctatattcttcactaatcaat 190  Q
    ||||||||||||||||||||||||||||||| ||| ||| |     ||| | |||     |||||||||||||||| | ||| ||||||  ||||||| |    
T  23660348 agagcctctgctcgccgtggcgagttcaggtcagattccaaaagtttcattctaaaatctttccaggttcaatctcattctacattctttcctaatcatt 23660447  T
Q  191 attagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||| |  ||||||||||||||||||| ||||    
T  23660448 attagacatgttcaggcactcaaaagcatctaaggatcaa 23660487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 230
Target Start/End: Complemental strand, 23071695 - 23071619
Alignment:
Q  154 caggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||||||| | ||| ||||||  ||||||| ||||||||||||| |  ||||||||||||||||||||||||    
T  23071695 caggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaa 23071619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 23708493 - 23708383
Alignment:
Q  22 ggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtg 119  Q
    ||||||||| || || | ||||||||||||| |||||||||||  |||||| || |||||  || ||| |||||| |||||||||||||| |||||  ||    
T  23708493 ggttcaactatcaacaactcgtgcgacaaagatcgcaaaatcctaaacaag-cattctgtaactgggtaactcgcaaggcgagagcctctactcgctatg 23708395  T
Q  120 gcgagttcaggt 131  Q
    ||||||||||||    
T  23708394 gcgagttcaggt 23708383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 91 - 129
Target Start/End: Complemental strand, 22134020 - 22133982
Alignment:
Q  91 tcgcgaggcgagagcctctgctcgccgtggcgagttcag 129  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  22134020 tcgcgaggcgagagcctctgctcgccatggcgagttcag 22133982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 128
Target Start/End: Complemental strand, 22740768 - 22740730
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttca 128  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  22740768 ctcgcgaggcgagagcatctgctcgccgtggcgagttca 22740730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 127
Target Start/End: Complemental strand, 23071768 - 23071731
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttc 127  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  23071768 ctcgcgaggcgagagcctctgctcgccatggcgagttc 23071731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Complemental strand, 12901321 - 12901286
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagt 125  Q
    |||||||||||||||| |||||||||||||||||||    
T  12901321 ctcgcgaggcgagagcatctgctcgccgtggcgagt 12901286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Complemental strand, 24628287 - 24628252
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagt 125  Q
    |||||||||||||||| |||||||||||||||||||    
T  24628287 ctcgcgaggcgagagcatctgctcgccgtggcgagt 24628252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Original strand, 24649654 - 24649689
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagt 125  Q
    |||||||||||||||| |||||||||||||||||||    
T  24649654 ctcgcgaggcgagagcatctgctcgccgtggcgagt 24649689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Complemental strand, 27379241 - 27379206
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagt 125  Q
    |||||||||||||||| |||||||||||||||||||    
T  27379241 ctcgcgaggcgagagcatctgctcgccgtggcgagt 27379206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Complemental strand, 27383287 - 27383252
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagt 125  Q
    |||||||||||||||| |||||||||||||||||||    
T  27383287 ctcgcgaggcgagagcatctgctcgccgtggcgagt 27383252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Original strand, 27602094 - 27602129
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagt 125  Q
    |||||||||||||||| |||||||||||||||||||    
T  27602094 ctcgcgaggcgagagcatctgctcgccgtggcgagt 27602129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 132
Target Start/End: Original strand, 28406297 - 28406336
Alignment:
Q  93 gcgaggcgagagcctctgctcgccgtggcgagttcaggtt 132  Q
    ||||||||||||||||| |||||| |||||||||||||||    
T  28406297 gcgaggcgagagcctctactcgccatggcgagttcaggtt 28406336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Complemental strand, 41530818 - 41530783
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagt 125  Q
    |||||||||||||||| |||||||||||||||||||    
T  41530818 ctcgcgaggcgagagcatctgctcgccgtggcgagt 41530783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 28292027 - 28291958
Alignment:
Q  161 aatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||| | ||| ||||||  ||||||| | ||||||||||| |  ||||||||||||||||||||||||    
T  28292027 aatctcattctacattctttcctaatcattcttagacatgttcaggcactcaaaagcatctaaggttcaa 28291958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 19672319 - 19672367
Alignment:
Q  182 ctaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||| ||||| |||| || |||||||||||| ||||||||||||||    
T  19672319 ctaatcattattatacatattcaaacactcaaaatcatctaaggttcaa 19672367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 22133921 - 22133873
Alignment:
Q  182 ctaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||| ||||||||||||| |  ||||||||||||||||||| ||||    
T  22133921 ctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaa 22133873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 25176158 - 25176198
Alignment:
Q  91 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  25176158 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 25176198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 126
Target Start/End: Original strand, 31756232 - 31756268
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagtt 126  Q
    |||||||||||||||||||| |||||| |||||||||    
T  31756232 ctcgcgaggcgagagcctctactcgccatggcgagtt 31756268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 137; Significance: 1e-71; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 16199541 - 16199314
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||||||||||||||||||||| | |||||| |||||||||||||||||||| |||||||||||||| | |||||||||||||||||    
T  16199541 aagtcttaatcctacccaagggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatccaataagtcactctgtttttgggtcactcgcgaggcga 16199442  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    |||| ||||||||| ||||||||||||||| ||||||||| ||||||||||| |||||||||||| ||||| ||||||  ||||||| ||| ||||||||    
T  16199441 gagcgtctgctcgctgtggcgagttcaggtcagaatccca-cagtttaattctaggttcaatctcatcctacattctttcctaatcattataagacatgt 16199343  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | |  |||||||||||||| |||||||||    
T  16199342 taaggcactcaaaagcatccaaggttcaa 16199314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 21918895 - 21918666
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    ||||||||||  ||||||||||||||||||||||| | || ||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  21918895 aagtcttaatcttacccaagggttcaactctcgacaactcatgcaacaaaggtcgcaaaatctaacaagtcactctgtttctaggtcactcgcgaggcga 21918796  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagttt-aattccaggttcaatctcgtcctatattcttcactaatcaatattagacatg 200  Q
    ||||||||||||||| |||||||||||||| |||||||||  ||||| | |||||||||||||||| ||||| ||||||  ||||||| |||||||||||    
T  21918795 gagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttcatttccaggttcaatctcttcctacattcttttctaatcattattagacatg 21918696  T
Q  201 ttgaaacactcaaaagcatctaaggttcaa 230  Q
    || |  ||||| ||||||||||||||||||    
T  21918695 ttcaggcactccaaagcatctaaggttcaa 21918666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 31971481 - 31971709
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||||| |||||| |||||||| | |||||| ||||||||||||||||| ||||||||||||| ||||| |||| ||||||||| ||    
T  31971481 aagtcttaatcctacccaaaggttcagctctcgacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctatttctgggtcgctcgcgaggtga 31971580  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
     ||||||||||||||| ||||||||||||| |||||| ||  ||||||||||||||||||||||| ||||| || |||  ||||||| ||||||||||||    
T  31971581 cagcctctgctcgccggggcgagttcaggtcagaatctcacaagtttaattccaggttcaatctcatcctacatcctttcctaatcattattagacatgt 31971680  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | |  ||| ||||||||||||||||||||    
T  31971681 tcaggcacacaaaagcatctaaggttcaa 31971709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 25363035 - 25362807
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||||| |||||||||||| || | |||||| | |||||||||||| ||  ||||| |||||||||||  |||||||| ||||||||    
T  25363035 aagtcttaatactacccaaaggttcaactctcaacaactcgtgcaagaaaggtcgcaaagtctcacaaggcactctgtttccgggtcactctcgaggcga 25362936  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    ||||||||||||||| |||||||||||||| |||||||||  ||||| ||||||||||||||||| ||||| ||||||  ||||||| |||||| |||||    
T  25362935 gagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttcattccaggttcaatctcatcctacattctttcctaatcattattagtcatgt 25362836  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | |  |||||||| |||||||||||||||    
T  25362835 tcagtcactcaaaggcatctaaggttcaa 25362807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 20536434 - 20536673
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||| | |||||||| |||||| | |||||| ||||||||||||||| | || |||||||||||||||| |||||||||||||||||    
T  20536434 aagtcttaatactaccccaaggttcaacactcgacaactcgtgcaacaaaggtcgcaaaacctaataagtcactctgtttctgggtcactcgcgaggcga 20536533  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaa-----------ttccaggttcaatctcgtcctatattcttcactaatcaat 190  Q
    |||||||| ||||||||||||||||||||| |||||||||| ||||| |           |||||||||||||||| ||||| ||||||  ||||||| |    
T  20536534 gagcctctactcgccgtggcgagttcaggtcagaatcccataagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcatt 20536633  T
Q  191 attagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    || ||||||||| |  ||||||||||||||||||||||||    
T  20536634 atcagacatgttcaggcactcaaaagcatctaaggttcaa 20536673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 22 - 230
Target Start/End: Complemental strand, 18879112 - 18878893
Alignment:
Q  22 ggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggc 121  Q
    ||||||||||||||| | |||||| ||||||| ||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||| | ||||    
T  18879112 ggttcaactctcgacaactcgtgcaacaaaggccgcaaaatctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgtcttggc 18879013  T
Q  122 gagttcaggttagaatcccatcagtttaa-----------ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacact 210  Q
    |||||||||| |||||||||  ||||| |           |||||||||||||||| ||||| ||||||  ||||||| ||||||||||||| |  ||||    
T  18879012 gagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcact 18878913  T
Q  211 caaaagcatctaaggttcaa 230  Q
    ||||||||||||||| ||||    
T  18878912 caaaagcatctaaggatcaa 18878893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 18818304 - 18818066
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||| |   |||||||||| || | |||||| ||||||||||||||| | |||||| |||||||||||| |||||||||||||||||    
T  18818304 aagtcttaatactaccctaaatttcaactctcaacaactcgtgcaacaaaggtcgcaaaacctaacaagacactctgtttctgggtcactcgcgaggcga 18818205  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatccca-----tcagttta-----attccaggttcaatctcgtcctatattcttcactaatcaata 191  Q
    |||||||||||||||||||||||||||||| |||| || |     ||| ||||      |||||||||||||||| ||||| ||| ||  ||||||| ||    
T  18818204 gagcctctgctcgccgtggcgagttcaggtcagaaaccaaaagtttcattttacaatctttccaggttcaatctcatcctacattttttcctaatcatta 18818105  T
Q  192 ttagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||||| |  ||||||||||||||||||| ||||    
T  18818104 ttagacatgttcaggcactcaaaagcatctaaggatcaa 18818066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 21923823 - 21923584
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||  | |||||||||||| || | ||| || ||||||||||||||| | |||||| |||||||||||| |||||||||||||||||    
T  21923823 aagtcttaatactacctcaaggttcaactctcaactactcgggcaacaaaggtcgcaaaacctaacaaggcactctgtttctgggtcactcgcgaggcga 21923724  T
Q  102 gagcctctgctcgccgtggcgagttca-ggttagaatcccatcagtttaattc----------caggttcaatctcgtcctatattcttcactaatcaat 190  Q
    |||||||||||| |||||||||||||| ||| ||||||| |  ||||| ||||          ||||||||||||| ||||| |||||   ||||||| |    
T  21923723 gagcctctgctcaccgtggcgagttcagggtcagaatccaaaaagtttcattctaaatcttttcaggttcaatctcatcctacattctgtcctaatcatt 21923624  T
Q  191 attagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||| | |||||||||||||||||||| ||||    
T  21923623 attagacatgttcagacactcaaaagcatctaaggatcaa 21923584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 45130893 - 45130687
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||||||||| ||||||||||| | |||||| ||||||||||||||||| || |||||||||||||||| |||||||||||||||||    
T  45130893 aagtcttaatcctacccaagggtccaactctcgacaactcgtgcaacaaaggtcgcaaaatctaataagtcactctgtttctgggtcactcgcgaggcga 45130794  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
                          |||||||| |||||||||  ||||||||||||||||||||||| ||||| ||||||  ||||||| ||||||||||||    
T  45130793 ----------------------gttcaggtcagaatcccacaagtttaattccaggttcaatctcatcctacattctttcctaatcattattagacatgt 45130716  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | |  ||||||||||||||||||||||||    
T  45130715 tcaggcactcaaaagcatctaaggttcaa 45130687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 23 - 230
Target Start/End: Original strand, 23406628 - 23406846
Alignment:
Q  23 gttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggcg 122  Q
    ||||||||||| |  | |||||| ||||||||| ||||| | |||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  23406628 gttcaactctcaataactcgtgcaacaaaggtcacaaaacctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctactcgccgtggcg 23406727  T
Q  123 agttcaggttagaatcccatcagtttaa-----------ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactc 211  Q
    ||||||||| |||||||||  ||||| |           |||||||| ||||||| ||||| ||||||  ||||||| ||||||||||||| |  |||||    
T  23406728 agttcaggtcagaatcccacaagtttcattctacaatctttccaggtccaatctcatcctacattctttcctaatcattattagacatgttcaggcactc 23406827  T
Q  212 aaaagcatctaaggttcaa 230  Q
    |||||||||||||| ||||    
T  23406828 aaaagcatctaaggatcaa 23406846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 22626961 - 22627200
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    |||||| ||| |||||| | |||||||||||| || | |||||| ||||||||||||||| || |||||| |||||||||||| | ||||||||||||||    
T  22626961 aagtctcaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagacactctgtttctagatcactcgcgaggcg 22627060  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaatccca-----tcagttta-----attccaggttcaatctcgtcctatattcttcactaatcaat 190  Q
    ||||||||||||||||||||| ||||| ||| ||| | |||     ||| | ||      ||| |||||||||||| ||||| ||||||  ||||||| |    
T  22627061 agagcctctgctcgccgtggcaagttcgggtcagatttccaaaggttcattctacaatctttcgaggttcaatctcatcctacattctttcctaatcatt 22627160  T
Q  191 attagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||| |  ||||||||||||||||||| ||||    
T  22627161 attagacatgttcaggcactcaaaagcatctaaggatcaa 22627200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 28648939 - 28648700
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    |||||| ||| |||||| | |||||||||||| || | |||||| |||||||||||||||||| |||||| |||||||||||| |||||  ||| |||||    
T  28648939 aagtctcaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcatgcgcaaggcg 28648840  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaatccca------tcagtttaa----ttccaggttcaatctcgtcctatattcttcactaatcaat 190  Q
    ||||||||||||||||||||||||||||||| | ||| | |      ||| | |||    ||||| |||||||||| ||||| ||||||   |||||| |    
T  28648839 agagcctctgctcgccgtggcgagttcaggtcaaaattcaaaaggtttcattctaaatctttccatgttcaatctcatcctacattctttcataatcatt 28648740  T
Q  191 attagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||| |  ||||||||||||||||||| ||||    
T  28648739 attagacatgttcaggcactcaaaagcatctaaggatcaa 28648700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 42 - 230
Target Start/End: Original strand, 6759522 - 6759722
Alignment:
Q  42 gtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaatccc 140  Q
    |||||||| || | ||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||    
T  6759522 gtgcgacacagattgcaaaatcctaacaagacactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttcc 6759621  T
Q  141 atcagtt-----------taattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttca 229  Q
    |  ||||           || ||||| |||||||||| | ||| ||||||  ||||||| ||||||||||||| || ||||||||||||||||||| |||    
T  6759622 aaaagtttcattctaaaatatttccaagttcaatctcattctacattctttcctaatcattattagacatgttcaagcactcaaaagcatctaaggatca 6759721  T
Q  230 a 230  Q
    |    
T  6759722 a 6759722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 13 - 230
Target Start/End: Original strand, 41598421 - 41598649
Alignment:
Q  13 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctg 110  Q
    |||||| | |||||||||||| |||| ||||||| ||||| |||||||||||  |||||| || |||||  || ||||||||||||||||||||||||||    
T  41598421 ctaccccaaggttcaactctcaacgactcgtgcggcaaagatcgcaaaatcctaaacaag-cattctgtaactaggtcactcgcgaggcgagagcctctg 41598519  T
Q  111 ctcgccgtggcgagttcaggttagaatccca-----tcagtttaa-----ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatg 200  Q
    |||||| |||||||||||||| ||| |||||     ||| | |||     |||||||||||||||| | ||| ||||||   |||||| |||||||||||    
T  41598520 ctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttcaatctcattctacattctttcataatcattattagacatg 41598619  T
Q  201 ttgaaacactcaaaagcatctaaggttcaa 230  Q
    || |  ||||||||||||||||||| ||||    
T  41598620 ttcaggcactcaaaagcatctaagggtcaa 41598649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 230
Target Start/End: Original strand, 23648781 - 23649018
Alignment:
Q  4 gtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgag 102  Q
    |||||||| |||||| | |||||||||||| || | |||||| |||||||||||| || || ||||||||||||||||||| ||| |||| |||||||||    
T  23648781 gtcttaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcataaacctaacaagtcactctgtttctgggttactcacgaggcgag 23648880  T
Q  103 agcctctgctcgccgtggcgagttcaggttagaatccca-------tcagtttaa----ttccaggttcaatctcgtcctatattcttcactaatcaata 191  Q
    |||||||| ||||| |||||||||| ||| ||||| |||       ||| | |||    || ||||| ||||||| ||||| ||||||  ||||||| ||    
T  23648881 agcctctgatcgccatggcgagttc-ggtcagaattccaaaatgtttcattctaagtcttttcaggtccaatctcatcctacattctttcctaatcatta 23648979  T
Q  192 ttagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||||| |  ||||||||||||||||||| ||||    
T  23648980 ttagacatgttcagtcactcaaaagcatctaaggatcaa 23649018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 230
Target Start/End: Complemental strand, 16092184 - 16091997
Alignment:
Q  54 tcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaatcccatcag------t 146  Q
    ||||||||||| |||| | |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||  ||      |    
T  16092184 tcgcaaaatcctaacagggcactctgtttctgggtcactcgggaggcgagagcctctgctcgccgtggcgagttcaggtcagaattccaaaagttttttt 16092085  T
Q  147 ttaa----ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||    || |||||| |||||| | ||| ||||||  ||||||| ||||||||||||| |  ||||||||||||||||||| ||||    
T  16092084 ttaaatcttttcaggtttaatctcattctacattctttcctaatcattattagacatgttcatgcactcaaaagcatctaaggatcaa 16091997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 225
Target Start/End: Original strand, 22875302 - 22875525
Alignment:
Q  13 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgc 111  Q
    |||||| | |||||||||||  || | | |||||||| || |||||||  || ||||||||||||||||||| |||||||||||||||||||||||||||    
T  22875302 ctaccccaaggttcaactcttaacaacttgtgcgacatagatcgcaaagccctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgc 22875401  T
Q  112 tcgccgtggcgagttcaggttagaatccca-----tcagtttaa-----ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    ||| | |||||||||||||| ||| |||||     ||| | |||     |||||||||||| ||||| ||| | ||||  ||||||| ||||| ||||||    
T  22875402 tcgtcatggcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttcaacctcgttctacaatctttcctaatcattattaaacatgt 22875501  T
Q  202 tgaaacactcaaaagcatctaagg 225  Q
    | | || |||||||||||||||||    
T  22875502 ttagacgctcaaaagcatctaagg 22875525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 21255605 - 21255684
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||||||| ||||| ||||||  ||||||| |||||||||||||    ||||||||||||||||||||||||    
T  21255605 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgtttgggcactcaaaagcatctaaggttcaa 21255684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 230
Target Start/End: Complemental strand, 5866009 - 5865933
Alignment:
Q  154 caggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||||||| | ||| ||||||  ||||||| ||||||||||||| |  ||||||||||||||||||||||||    
T  5866009 caggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaa 5865933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 17141302 - 17141378
Alignment:
Q  154 caggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||||||| | ||| ||||||  ||||||| ||||||||||||| |  ||||||||||||||||||||||||    
T  17141302 caggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaa 17141378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 7373017 - 7373088
Alignment:
Q  23 gttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgc 94  Q
    ||||||||||| || | |||||| ||||||||||||||| | |||||| |||||||||||| ||||||||||    
T  7373017 gttcaactctcaacaactcgtgcaacaaaggtcgcaaaacctaacaagacactctgtttctgggtcactcgc 7373088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 7373135 - 7373214
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||||||| || ||||| ||||||  ||||||| ||||||||||||| |  ||||||||||||||||||| ||||    
T  7373135 ttccaggttcaatttcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaa 7373214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 21249767 - 21249846
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||||| |||| ||||| ||||||  ||||||| |||||||||||||    ||||||||||||||||||||||||    
T  21249767 ttccaggttcagtctcatcctacattctttcctaatcattattagacatgtttgggcactcaaaagcatctaaggttcaa 21249846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 21491382 - 21491457
Alignment:
Q  155 aggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||| | ||| ||||||  ||||||| ||||||||||||| |  ||||||||||||||||||||||||    
T  21491382 aggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaa 21491457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 127
Target Start/End: Complemental strand, 5866082 - 5866045
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttc 127  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  5866082 ctcgcgaggcgagagcctctgctcgccatggcgagttc 5866045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 127
Target Start/End: Original strand, 17141229 - 17141266
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttc 127  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  17141229 ctcgcgaggcgagagcctctgctcgccatggcgagttc 17141266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 127
Target Start/End: Original strand, 21249697 - 21249734
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttc 127  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  21249697 ctcgcgaggcgagagcctctgctcgccatggcgagttc 21249734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 39834147 - 39834188
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  39834147 ctcgcgaggcgagagcctctactcgccatggcgagttcaggt 39834188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Original strand, 43252110 - 43252145
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagt 125  Q
    |||||||||||||||| |||||||||||||||||||    
T  43252110 ctcgcgaggcgagagcatctgctcgccgtggcgagt 43252145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 127
Target Start/End: Original strand, 21255535 - 21255572
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttc 127  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  21255535 ctcgcgaggcgagagccgctgctcgccatggcgagttc 21255572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 230
Target Start/End: Original strand, 6520793 - 6520833
Alignment:
Q  190 tattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||||||| | |||||||||| ||||||||||||||    
T  6520793 tattagacatgttcagacactcaaaaacatctaaggttcaa 6520833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 21674021 - 21674061
Alignment:
Q  91 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  21674021 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 21674061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 21972393 - 21972353
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcagg 130  Q
    |||||| ||||||||| ||||||||||||||||||| ||||    
T  21972393 ctcgcggggcgagagcatctgctcgccgtggcgagtacagg 21972353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 21976478 - 21976438
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcagg 130  Q
    |||||| ||||||||| ||||||||||||||||||| ||||    
T  21976478 ctcgcggggcgagagcatctgctcgccgtggcgagtacagg 21976438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 130
Target Start/End: Original strand, 37116664 - 37116704
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcagg 130  Q
    |||||||||||||||||||| |||||  |||||||||||||    
T  37116664 ctcgcgaggcgagagcctctactcgctatggcgagttcagg 37116704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 38854955 - 38854907
Alignment:
Q  182 ctaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||| ||||||||||||| |  ||||||||| ||||||||||||||    
T  38854955 ctaatcattattagacatgttcaggcactcaaaaacatctaaggttcaa 38854907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 38855055 - 38855015
Alignment:
Q  91 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  38855055 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 38855015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 137; Significance: 1e-71; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 21292865 - 21292637
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||||||||| |||||| |||| | |||||| ||||||||||||||||| || |||||||||| ||||| |||||||||||||||||    
T  21292865 aagtcttaatcctacccaagggtccaactcccgacaactcgtgcaacaaaggtcgcaaaatctaaaaagtcactctatttctgggtcactcgcgaggcga 21292766  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    |||||||||||||||||||||||||||||| ||||| |||  ||||||||||||||||||||||| ||||| ||||||  ||||| | ||||||||||||    
T  21292765 gagcctctgctcgccgtggcgagttcaggtcagaattccacaagtttaattccaggttcaatctcatcctacattctttcctaattattattagacatgt 21292666  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | |  ||||||||||||||||||||||||    
T  21292665 tcaggcactcaaaagcatctaaggttcaa 21292637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 8286737 - 8286509
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||||| |||||||||||| || | ||  || ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  8286737 aagtcttaatactacccaaaggttcaactctcaacaactcaagcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcgaggcga 8286638  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    ||||||||||||||| |||| |||| |||| |||||||||  ||||| ||||||||||||||||| ||||| ||||||   |||||| ||||||||||||    
T  8286637 gagcctctgctcgccatggctagtttaggtcagaatcccacaagtttcattccaggttcaatctcatcctacattctttcttaatcattattagacatgt 8286538  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    |    |||||||| |||||||||||||||    
T  8286537 tccggcactcaaatgcatctaaggttcaa 8286509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 22107268 - 22107040
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||| ||| |||||| ||||| || | |||||| |||||||||||||| |   ||||| |||||| ||||  |||||||||||||||||    
T  22107268 aagtcttaatactactcaaaggttcatctctcaacaactcgtgcaacaaaggtcgcaaagtatcacaaggcactctatttccgggtcactcgcgaggcga 22107169  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    ||||||||||||||| ||| |||||||||| |||||||||  ||||||||| ||||||||||||||||||| ||||||  ||||||||||||||||||||    
T  22107168 gagcctctgctcgccatggtgagttcaggtcagaatcccacaagtttaatttcaggttcaatctcgtcctacattctttcctaatcaatattagacatgt 22107069  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | |  |||||||| |||||||| ||||||    
T  22107068 tcaggcactcaaacgcatctaaagttcaa 22107040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 22075245 - 22075473
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgttt-ctcggtcactcgcgaggcg 100  Q
    |||||||||| |||||||| |||| ||  ||| || | |||||| ||||||||||||||| | ||||||||||||||||| || ||||||||||||||||    
T  22075245 aagtcttaatgctacccaaaggtttaatcctcaacaactcgtgcaacaaaggtcgcaaaa-ctaacaagtcactctgttttctgggtcactcgcgaggcg 22075343  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatg 200  Q
    ||||||||||||||||||||||||||||||| |||| | ||  ||||| |||||||||||| | || ||||| ||||||  ||||||| |||||||||||    
T  22075344 agagcctctgctcgccgtggcgagttcaggtcagaacctcacaagtttcattccaggttcattttcatcctacattcttacctaatcattattagacatg 22075443  T
Q  201 ttgaaacactcaaaagcatctaaggttcaa 230  Q
    || |  ||||||||||||||||||||||||    
T  22075444 ttcaggcactcaaaagcatctaaggttcaa 22075473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 13095720 - 13095959
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    |||||||||| |||||| | |||||||||||| |||| |||||| ||||||||||||||| || ||||||||||||||||||| ||||||||||||||||    
T  13095720 aagtcttaatactaccccaaggttcaactctcaacgactcgtgcaacaaaggtcgcaaaaacctaacaagtcactctgtttctaggtcactcgcgaggcg 13095819  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaa----------ttccaggttcaatctcgtcctatattcttcactaatcaat 190  Q
    || |||||||||||| ||||||||||||||| |||||||||  ||||| |          |||||||| ||||||| ||||| ||||||  ||||||| |    
T  13095820 agggcctctgctcgctgtggcgagttcaggtcagaatcccacaagtttcattctaaatctttccaggtccaatctcatcctacattctttcctaatcatt 13095919  T
Q  191 attagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||| |  |  |||||||||||||||| ||||    
T  13095920 attagacatgttcaggctttcaaaagcatctaaggatcaa 13095959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 21986043 - 21985803
Alignment:
Q  1 caagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggc 99  Q
    ||||||| ||| |||||| | |||||||||||| || | |||||| ||||||||||||||| || |||||| |||||||||||| |||||||||||||||    
T  21986043 caagtctgaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagacactctgtttctgggtcactcgcgaggc 21985944  T
Q  100 gagagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaa----------ttccaggttcaatctcgtcctatattcttcactaatcaa 189  Q
    ||| ||||||||| |||||||||||||||||| ||||| |||  ||||| |          |||||||||||||||| | ||| ||||||  |||||||     
T  21985943 gagggcctctgcttgccgtggcgagttcaggtcagaattccaaaagtttcattctaaatctttccaggttcaatctcattctacattctttcctaatcat 21985844  T
Q  190 tattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||||||| |  ||||||||||||||||||| ||||    
T  21985843 tattagacatgttcaggcactcaaaagcatctaaggatcaa 21985803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 13025536 - 13025676
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    |||||||||| |||||| | |||||||||||| || |||||||| ||||||||||||||| || ||||||||||||||||||| ||||||||||||||||    
T  13025536 aagtcttaatactaccccaaggttcaactctcaacaaatcgtgcaacaaaggtcgcaaaaacctaacaagtcactctgtttctaggtcactcgcgaggcg 13025635  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaatccca 141  Q
    || |||| ||||||| ||||||||||||||| |||||||||    
T  13025636 agggcctttgctcgctgtggcgagttcaggtcagaatccca 13025676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 23390391 - 23390152
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| ||| || | ||||||||||||||| | |||||| ||||||||| ||||||| |||||| ||||||||||   ||||||||| |||||||    
T  23390391 aagtcttaatactatcccaaggttcaactctcgacaactcgtgcaacaaaggtcacaaaatctaacaaggcactctgttttagggtcactcgtgaggcga 23390292  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaa-----------ttccaggttcaatctcgtcctatattcttcactaatcaat 190  Q
     ||||||| |||||| |||||||||||||| |||||||||  ||||| |           |||||||||||||||| ||||| ||||||  ||||||| |    
T  23390291 tagcctctactcgccatggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcatt 23390192  T
Q  191 attagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||| |  ||||||||||||||||||| ||||    
T  23390191 attagacatgttcaggcactcaaaagcatctaaggatcaa 23390152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 13 - 230
Target Start/End: Original strand, 24529457 - 24529686
Alignment:
Q  13 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgc 111  Q
    |||||| | |||||||||||| || | | |||| ||||||||||||||| || |||||| | |||||||||| |||||||||||||||||||||||||||    
T  24529457 ctaccccaaggttcaactctcaactactagtgcaacaaaggtcgcaaaaacctaacaagactctctgtttctgggtcactcgcgaggcgagagcctctgc 24529556  T
Q  112 tcgccgtggcgagttcaggttagaatcccatcagtttaa-----------ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatg 200  Q
    |||||||||||||||||| | ||||| |||  ||||| |           |||||||||||||||| ||||| ||||||  ||||||| |||||||||||    
T  24529557 tcgccgtggcgagttcagatcagaattccaaaagtttcattctacaacctttccaggttcaatctcatcctacattctttcctaatcattattagacatg 24529656  T
Q  201 ttgaaacactcaaaagcatctaaggttcaa 230  Q
    || |  |||| |||||||||||||| ||||    
T  24529657 ttcaggcactgaaaagcatctaaggatcaa 24529686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 202
Target Start/End: Original strand, 24493794 - 24494005
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    |||||||||| |||||| | |||||||||||| || | |||||| ||||||||||||||| || |||||| |||||||||| | ||| |||| |||||||    
T  24493794 aagtcttaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagacactctgtttatgggttactcacgaggcg 24493893  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaa----------ttccaggttcaatctcgtcctatattcttcactaatcaat 190  Q
    | ||||||||||||||||||||||||||||| ||||||| |  ||||| |          |||||||||||||||| ||||| ||||||  ||||||| |    
T  24493894 aaagcctctgctcgccgtggcgagttcaggtcagaatccaaaaagtttcattctaaatctttccaggttcaatctcatcctacattctttcctaatcatt 24493993  T
Q  191 attagacatgtt 202  Q
    ||||||||||||    
T  24493994 attagacatgtt 24494005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 25421758 - 25421885
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    |||||| ||| |||||| | |||||||||||| || | |||||| |||||||||||||||||| |||||| ||||| |||||| ||||||||||||||||    
T  25421758 aagtctcaatgctaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactcggtttctaggtcactcgcgaggcg 25421857  T
Q  101 agagcctctgctcgccgtggcgagttca 128  Q
    ||||||||| ||||||||||||||||||    
T  25421858 agagcctctactcgccgtggcgagttca 25421885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 42 - 137
Target Start/End: Original strand, 9078218 - 9078314
Alignment:
Q  42 gtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaat 137  Q
    |||||||| || ||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9078218 gtgcgacacagatcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaat 9078314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 42 - 230
Target Start/End: Original strand, 1096733 - 1096932
Alignment:
Q  42 gtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaatccc 140  Q
    |||||||| || ||||||||| | || ||| || ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||| | ||    
T  1096733 gtgcgacagagatcgcaaaattctaaaaaggcattctgtttctgggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagatttcc 1096832  T
Q  141 atcagtt----------taattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |  ||||          |  |||||| ||||||||| ||||| ||||||  ||||||| ||||||||||||| |  ||||||||||||||||||||||||    
T  1096833 aaaagttcattctgcaatctttccagattcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaa 1096932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 230
Target Start/End: Complemental strand, 36154712 - 36154484
Alignment:
Q  13 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctg 110  Q
    |||||| | |||||||||||| |||| ||||||||||||| |||||||||||  |||||| || |||||   | |||||||||||||||||||||||||     
T  36154712 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattctgtaaataggtcactcgcgaggcgagagcctcta 36154614  T
Q  111 ctcgccgtggcgagttcaggttagaatcccatcagtttaattc-----------caggttcaatctcgtcctatattcttcactaatcaatattagacat 199  Q
    |||||| |||||||||||||| ||| || ||  ||||| ||||           |||||||||||||   ||| ||||||  ||||||| ||||||||||    
T  36154613 ctcgccatggcgagttcaggtcagattctcaa-agttttattctaaaatctatccaggttcaatctcactctacattctttcctaatcattattagacat 36154515  T
Q  200 gttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||| || ||||||||||||||||||| ||||    
T  36154514 gttcaagcactcaaaagcatctaaggatcaa 36154484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 22 - 230
Target Start/End: Original strand, 25431640 - 25431859
Alignment:
Q  22 ggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtgg 120  Q
    |||||||||||| || | |||||  |||||||||||||||||| |||||| |||||  ||||| |||||||||||||| |||||||||| ||||||||||    
T  25431640 ggttcaactctcaacaactcgtgtaacaaaggtcgcaaaatcctaacaaggcactcgatttctgggtcactcgcgaggtgagagcctctactcgccgtgg 25431739  T
Q  121 cgagttcaggttagaatcccatcagtttaa----------ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacact 210  Q
    |||||||| || ||| | |||  ||||| |          |||||||| ||||||| ||||| ||||||  ||||||| || || ||||||| |  ||||    
T  25431740 cgagttcaagtcagatttccaaaagtttcattctaaatctttccaggtccaatctcatcctaaattctttcctaatcattaataaacatgttcaggcact 25431839  T
Q  211 caaaagcatctaaggttcaa 230  Q
    ||||||||||||||| ||||    
T  25431840 caaaagcatctaaggatcaa 25431859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 11581129 - 11581010
Alignment:
Q  13 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctg 110  Q
    |||||| | |||||||||||| |||| |||| |||||||| |||||||||||  |||||| || |||||   | ||||||||||||||||||||||||||    
T  11581129 ctaccccaaggttcaactctcaacgactcgtacgacaaagatcgcaaaatcctaaacaag-cattctgtaaatgggtcactcgcgaggcgagagcctctg 11581031  T
Q  111 ctcgccgtggcgagttcaggt 131  Q
    |||||| ||||||||||||||    
T  11581030 ctcgccatggcgagttcaggt 11581010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 22119928 - 22119849
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||||||| ||||| ||||||  ||||||||||||||||||||| |  |||||||| |||||||||||||||    
T  22119928 ttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaaggcatctaaggttcaa 22119849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 22144296 - 22144406
Alignment:
Q  22 ggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtg 119  Q
    |||||||||||| || | ||||||||||||| |||||||||||  |||||| || |||||  || ||  ||||||||||||||||||||| |||||  ||    
T  22144296 ggttcaactctcaacaactcgtgcgacaaagatcgcaaaatcctaaacaag-cattctgtaactgggcaactcgcgaggcgagagcctctactcgctatg 22144394  T
Q  120 gcgagttcaggt 131  Q
    ||||||||||||    
T  22144395 gcgagttcaggt 22144406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 24767072 - 24766993
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||| ||||||||| ||||| ||||||   |||||||||||||||||||| |  |||||||| |||||||||||||||    
T  24767072 ttccagattcaatctcatcctacattctttcgtaatcaatattagacatgttcaggcactcaaaggcatctaaggttcaa 24766993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 230
Target Start/End: Complemental strand, 19660643 - 19660493
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaatc-cca------tcagtttaa----ttccaggttcaatctcgtcctatattct 178  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||| || |||      ||| | |||    ||||||||| |||||| | | | |||||    
T  19660643 ctcgcgaggcgagagcctctgctcgccatggcgagttc-ggttagattctccaaagttttcattctaagtctttccaggtttaatctcattccacattct 19660545  T
Q  179 tcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |  ||||||| ||||||||||||| |  ||||||||||||||||||||||||    
T  19660544 ttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaa 19660493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 21871306 - 21871227
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||||||| ||||| | ||||  ||||||| || || ||||||| |  ||||||||||||||||||||||||    
T  21871306 ttccaggttcaatctcatcctacactctttcctaatcattaataaacatgttcaggcactcaaaagcatctaaggttcaa 21871227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 21875586 - 21875507
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||||||| ||||| | ||||  ||||||| || || ||||||| |  ||||||||||||||||||||||||    
T  21875586 ttccaggttcaatctcatcctacactctttcctaatcattaataaacatgttcaggcactcaaaagcatctaaggttcaa 21875507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 129
Target Start/End: Complemental strand, 22119998 - 22119959
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 129  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  22119998 ctcgcgaggcgagagcctctgctcgccatggcgagttcag 22119959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 132
Target Start/End: Complemental strand, 22959339 - 22959297
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtt 132  Q
    |||||||||||||||||||| |||||| |||||||||||||||    
T  22959339 ctcgcgaggcgagagcctctactcgccatggcgagttcaggtt 22959297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 5888981 - 5888940
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  5888981 ctcgcgaggcgagagcctctactcgccatggcgagttcaggt 5888940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 131
Target Start/End: Original strand, 21565863 - 21565900
Alignment:
Q  94 cgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  21565863 cgaggcgagagcctctgctcgccatggcgagttcaggt 21565900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 191
Target Start/End: Original strand, 16674449 - 16674551
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaatccca--tcagtttaattccaggttcaatctcgtcctatattcttcactaatc 187  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||  | || ||  |||||||||||||||||| ||| ||  ||| ||||||    
T  16674449 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagctagaatcccaactaaggtt-gttccaggttcaatctcgttctaaatcattccctaatc 16674547  T
Q  188 aata 191  Q
    ||||    
T  16674548 aata 16674551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 20026746 - 20026706
Alignment:
Q  89 actcgcgaggcgagagcctctgctcgccgtggcgagttcag 129  Q
    ||||||||||||||||||||| ||||| |||||||||||||    
T  20026746 actcgcgaggcgagagcctctactcgctgtggcgagttcag 20026706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Complemental strand, 19472528 - 19472493
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagt 125  Q
    |||||||||||||||| |||||||||||||||||||    
T  19472528 ctcgcgaggcgagagcatctgctcgccgtggcgagt 19472493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Original strand, 20296145 - 20296180
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagt 125  Q
    |||||||||||||||| |||||||||||||||||||    
T  20296145 ctcgcgaggcgagagcatctgctcgccgtggcgagt 20296180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 129
Target Start/End: Complemental strand, 24767142 - 24767103
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 129  Q
    ||||||||||||||||||||||||||| || |||||||||    
T  24767142 ctcgcgaggcgagagcctctgctcgccatgacgagttcag 24767103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 25421918 - 25421997
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||| ||||||| |||||  |||||  ||||||| || |||||||||| |  ||||||||||||||||||| ||||    
T  25421918 ttccaggtccaatctcatcctaagttctttcctaatcattaatagacatgttcaggcactcaaaagcatctaaggatcaa 25421997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 129
Target Start/End: Original strand, 31342414 - 31342453
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 129  Q
    |||||||||||||||| |||||||||| ||||||||||||    
T  31342414 ctcgcgaggcgagagcatctgctcgccatggcgagttcag 31342453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 230
Target Start/End: Complemental strand, 11580979 - 11580901
Alignment:
Q  152 tccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||||||||| | ||| ||||||  ||||||| ||||| ||||||| |  ||||||||||| ||||||| ||||    
T  11580979 tccaggttcaatctcattctacattctttcctaatcattattaaacatgttcaggcactcaaaagcttctaaggatcaa 11580901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 21501961 - 21501919
Alignment:
Q  89 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  21501961 actcgcgaggcgagagcctctactcgctatggcgagttcaggt 21501919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 128
Target Start/End: Original strand, 25744036 - 25744074
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttca 128  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  25744036 ctcgcgaggcgagagcctctactcgccatggcgagttca 25744074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 131
Target Start/End: Complemental strand, 21741345 - 21741308
Alignment:
Q  94 cgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  21741345 cgaggcgagagcctctactcgccatggcgagttcaggt 21741308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 123114 - 123074
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcagg 130  Q
    |||||||||||||||| |||||||||| |||||||| ||||    
T  123114 ctcgcgaggcgagagcatctgctcgccatggcgagtacagg 123074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 9078338 - 9078406
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcat 219  Q
    |||||||||||||||| | ||| ||| ||  ||||||| ||||||||||||| |  |||||||||||||    
T  9078338 ttccaggttcaatctcattctacattttttcctaatcattattagacatgttcaggcactcaaaagcat 9078406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 19669317 - 19669365
Alignment:
Q  182 ctaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||| ||||||||||||| | |||||||||| ||||||||| ||||    
T  19669317 ctaatcattattagacatgttcagacactcaaaaacatctaaggatcaa 19669365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 130
Target Start/End: Original strand, 23201680 - 23201720
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcagg 130  Q
    |||||||||||||||| |||||||||| |||||||| ||||    
T  23201680 ctcgcgaggcgagagcatctgctcgccatggcgagtacagg 23201720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 51805 - 52030
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||||||||| ||| ||||||| | |||||| ||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  51805 aagtcttaatcctacccaagggtccaattctcgacaactcgtgcaacaaaagtcgcaaaatctaacaagtcactctgtttctgggtcactcgcgaggcga 51904  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    ||||||||||||||||||||||| ||||||||||||||| | ||||| ||||||||||||||||||||||| ||||||  ||||||| |||||||| |||    
T  51905 gagcctctgctcgccgtggcgagctcaggttagaatcccgtaagtttcattccaggttcaatctcgtcctacattctttcctaatcattattagacttgt 52004  T
Q  202 tgaaacactcaaaagcatctaaggtt 227  Q
    | |  |||||||| ||||| ||||||    
T  52005 tcaggcactcaaaggcatcaaaggtt 52030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 5 - 230
Target Start/End: Complemental strand, 5023 - 4798
Alignment:
Q  5 tcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagag 104  Q
    ||||||| |||||||||||||||||||||||| | |||||| ||||||||| |||||||||| ||||||||||||||||  ||||||||||||||||||     
T  5023 tcttaatcctacccaagggttcaactctcgacaactcgtgcaacaaaggtctcaaaatccaataagtcactctgtttctgtgtcactcgcgaggcgagat 4924  T
Q  105 cctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttga 204  Q
    ||||||||| |  |||||||||||||| |||||||||| |||| |||||||||||||||||| ||||| ||||||  ||||||| ||||||||||||| |    
T  4923 cctctgctctctttggcgagttcaggtcagaatcccataagttcaattccaggttcaatctcatcctacattctttcctaatcattattagacatgttca 4824  T
Q  205 aacactcaaaagcatctaaggttcaa 230  Q
      |||||||| |||||||||||||||    
T  4823 ggcactcaaaggcatctaaggttcaa 4798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 129; Significance: 6e-67; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 2178 - 2406
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||||| ||||||||||||||| | |||||| ||||||||||||||||| |||| |||||||||||||| |||||||||||||||||    
T  2178 aagtcttaatcctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacatgtcactctgtttctaggtcactcgcgaggcga 2277  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    |||||||||||||||||||||||||||||| || |||||   ||||||||||||||||||||||| ||||| |||| |  ||||| | ||||||||| ||    
T  2278 gagcctctgctcgccgtggcgagttcaggtcagcatccctcaagtttaattccaggttcaatctcatcctacattccttcctaattattattagacacgt 2377  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | |  |||||||| |||||||||||||||    
T  2378 tcaggcactcaaaggcatctaaggttcaa 2406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 129; Significance: 6e-67; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 13721 - 13949
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| ||||| || ||||||||||||||| | |||||| ||||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  13721 aagtcttaatcctaccgaaaggttcaactctcgacaactcgtgcaacaaaagtcgcaaaatctaacaagtcactctgtttctgggtcgctcgcgaggcga 13820  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    |||||||||||||||||||||||||||| | |||||| ||  ||||||||||||||||||||||| | ||| || |||  ||||||| ||||||||||||    
T  13821 gagcctctgctcgccgtggcgagttcagctcagaatctcacaagtttaattccaggttcaatctcatgctacatcctttcctaatcattattagacatgt 13920  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | |  ||||||||||||||||||||||||    
T  13921 tcaggcactcaaaagcatctaaggttcaa 13949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 129; Significance: 6e-67; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 15360 - 15132
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||||| |  |||||||||||| | |||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  15360 aagtcttaatcctacccaacgagtcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcgaggcga 15261  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    |||||||||||| ||||||||||||||||| ||||||| |  ||||| ||||||||||||||||| ||||| ||||||  ||||||| |||||||||| |    
T  15260 gagcctctgctctccgtggcgagttcaggtcagaatcctacaagttttattccaggttcaatctcatcctacattctttcctaatcattattagacatat 15161  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | |  |||||||||||||||| |||||||    
T  15160 taaggcactcaaaagcatctacggttcaa 15132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 129; Significance: 6e-67; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 32290 - 32518
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||||||||||||||||||||| | | | || ||||||||||||||||| || |||| ||||||||||| |||||||||||||||||    
T  32290 aagtcttaatcctacccaagggttcaactctcgacaactagagcaacaaaggtcgcaaaatcaaaaaagtaactctgtttctgggtcactcgcgaggcga 32389  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    |||||||||||||||||||| |||||| || |||||||||  ||||||||||||||||||||||| ||| | ||||||  ||| ||| ||||||||||||    
T  32390 gagcctctgctcgccgtggcaagttcaagtcagaatcccacaagtttaattccaggttcaatctcatcccacattctttcctagtcattattagacatgt 32489  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | |  ||||||||||||||||||||||||    
T  32490 tcaggcactcaaaagcatctaaggttcaa 32518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 11408 - 11180
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    ||||||||||||||||||| |||||||||||| || | |||||| ||||||||||||||||| ||||||||||| |||||||  ||||||||||||| ||    
T  11408 aagtcttaattctacccaaaggttcaactctctacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactttgtttctgtgtcactcgcgaggtga 11309  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    |||||||| |||||| |||||||||||||| || ||||||  ||||| ||||||||||||||||| ||||| ||||||  ||||||| ||||||||||||    
T  11308 gagcctcttctcgccttggcgagttcaggtcagtatcccacaagtttcattccaggttcaatctcatcctacattctttcctaatcattattagacatgt 11209  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | |  |||||||||| |||||||||||||    
T  11208 tcaggcactcaaaagaatctaaggttcaa 11180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 47212 - 47440
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||||||||||||||||||||| | |||||| ||||||||||| |  || |||||||||||||| || | |||||||||||||||||    
T  47212 aagtcttaatcctacccaagggttcaactctcgacaactcgtgcaacaaaggtcgccatttctaacaagtcactctggttttgggtcactcgcgaggcga 47311  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    |||||||||| | |||||||||| |||||| |||||||||  ||||||||||||||||||||||| ||||| |||| |  ||||||| |||||||||| |    
T  47312 gagcctctgcgctccgtggcgagctcaggtcagaatcccacaagtttaattccaggttcaatctcatcctacattcattcctaatcattattagacatat 47411  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | | |||||||||||||||||||||||||    
T  47412 tcagacactcaaaagcatctaaggttcaa 47440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 125; Significance: 2e-64; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 38801286 - 38801058
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| ||||||||||||||||||  |||| | |||| | ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  38801286 aagtcttaatcctacccaagggttcaacttccgacaactcgtacaacaaaggtcgcaaaatctaacaagtcactctgtttctaggtcactcgcgaggcga 38801187  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    |||||||| ||||||||||||||||||||| |||||||||  |||| |||||||||||||||| | ||||| ||||||  ||||||| ||||||||||||    
T  38801186 gagcctctactcgccgtggcgagttcaggtcagaatcccacaagttcaattccaggttcaatcacatcctacattctttcctaatcattattagacatgt 38801087  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | |  ||||||||  ||||||| ||||||    
T  38801086 tcaggcactcaaagacatctaaagttcaa 38801058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 21026906 - 21027134
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||||| |||| ||  ||| || | |||||| ||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||    
T  21026906 aagtcttaatgctacccaaaggtttaatcctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactttgtttctgggtcactcgcgaggcga 21027005  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    ||||||||||||||||||||||||| |||| |||| | ||  ||||| ||||||||||||||||| ||||| ||||||  ||||||| ||||||||||||    
T  21027006 gagcctctgctcgccgtggcgagtttaggtcagaacctcacaagtttcattccaggttcaatctcatcctacattcttacctaatcattattagacatgt 21027105  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | || ||||||||||||||||||| ||||    
T  21027106 tcaagcactcaaaagcatctaaggatcaa 21027134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 22356069 - 22355841
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaa-gtcactctgtttctcggtcactcgcgaggcg 100  Q
    |||||||||| ||| || | ||||||||||||||| | |||||| ||||||||| ||||||| ||||| |||||||||||||| |||||||||||| |||    
T  22356069 aagtcttaatgctatcccaaggttcaactctcgacaactcgtgcaacaaaggtctcaaaatctaacaatgtcactctgtttctaggtcactcgcgatgcg 22355970  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatg 200  Q
    | ||||||||||||||||||||||||||||| |||||||||  | ||| ||||||||||||||||| ||||| ||||||  ||||||| |||||||||||    
T  22355969 a-agcctctgctcgccgtggcgagttcaggtcagaatcccacaaatttcattccaggttcaatctcatcctacattctttcctaatcattattagacatg 22355871  T
Q  201 ttgaaacactcaaaagcatctaaggttcaa 230  Q
    || |  ||||||||||||||||||||||||    
T  22355870 ttcaggcactcaaaagcatctaaggttcaa 22355841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 22357755 - 22357527
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaa-gtcactctgtttctcggtcactcgcgaggcg 100  Q
    |||||||||| ||| || | ||||||||||||||| | |||||| ||||||||| ||||||| ||||| |||||||||||||| |||||||||||| |||    
T  22357755 aagtcttaatgctatcccaaggttcaactctcgacaactcgtgcaacaaaggtctcaaaatctaacaatgtcactctgtttctaggtcactcgcgatgcg 22357656  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatg 200  Q
    | ||||||||||||||||||||||||||||| |||||||||  | ||| ||||||||||||||||| ||||| ||||||  ||||||| |||||||||||    
T  22357655 a-agcctctgctcgccgtggcgagttcaggtcagaatcccacaaatttcattccaggttcaatctcatcctacattctttcctaatcattattagacatg 22357557  T
Q  201 ttgaaacactcaaaagcatctaaggttcaa 230  Q
    || |  ||||||||||||||||||||||||    
T  22357556 ttcaggcactcaaaagcatctaaggttcaa 22357527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 13 - 230
Target Start/End: Complemental strand, 27250613 - 27250396
Alignment:
Q  13 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgct 112  Q
    |||||||| ||||||||||||||| | |||||| ||||||||||||||||  ||||||  |||||||||||  |||||||||||||||||||||||||||    
T  27250613 ctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatataacaagggactctgtttctgtgtcactcgcgaggcgagagcctctgct 27250514  T
Q  113 cgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactca 212  Q
    || |||||||||||||||| |||||||||   |||| ||||||||||||||| | ||||| ||||||  ||||||| ||||||||||||| |  ||||||    
T  27250513 cgacgtggcgagttcaggtcagaatcccacaggtttcattccaggttcaatcccatcctacattctttcctaatcattattagacatgttcaggcactca 27250414  T
Q  213 aaagcatctaaggttcaa 230  Q
    ||||||||||||||||||    
T  27250413 aaagcatctaaggttcaa 27250396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 20847114 - 20846886
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||||| |||| ||  ||| || | |||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |    
T  20847114 aagtcttaatgctacccaaaggtttaatcctcaacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactcgcgaggcaa 20847015  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    |||||||||||||||||||||||||||||| | || | ||  ||||| ||||||||||||||||| ||||| ||||||  ||||||| ||||||||||||    
T  20847014 gagcctctgctcgccgtggcgagttcaggtcaaaacctcacaagtttcattccaggttcaatctcatcctacattcttacctaatcattattagacatgt 20846915  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | |  ||||||||||||||||||| ||||    
T  20846914 tcaggcactcaaaagcatctaaggatcaa 20846886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 2 - 224
Target Start/End: Complemental strand, 50210108 - 50209875
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    |||||| ||| |||||||| |||||||||||| || | |||||| |||||||||||||||||| |||||| |||||||||||| ||||||||||||||||    
T  50210108 aagtctcaatactacccaaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcg 50210009  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaa----------ttccaggttcaatctcgtcctatattcttcactaatcaat 190  Q
    ||||||||||||||||||||||||||||||| ||||| |||  ||||| |          |||||||||||||||| | ||| ||||||  ||||||| |    
T  50210008 agagcctctgctcgccgtggcgagttcaggtcagaattccaaaagtttcattctaaatctttccaggttcaatctcattctacattctttcctaatcatt 50209909  T
Q  191 attagacatgttgaaacactcaaaagcatctaag 224  Q
    |||||||||||| |  |||||||| |||| ||||    
T  50209908 attagacatgttcaggcactcaaaggcatataag 50209875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 22354467 - 22354228
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| ||||| || ||||||| |||| || | |||||| ||||||||||||||| | ||||||||||||||||||| ||||||| |||||||||    
T  22354467 aagtcttaatactacctaaaggttcaattctcaacaactcgtgcaacaaaggtcgcaaaacctaacaagtcactctgtttctgggtcacttgcgaggcga 22354368  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaat-----------tccaggttcaatctcgtcctatattcttcactaatcaat 190  Q
    |||||||| ||||||||||||||||||||| |||||||||  ||||| ||           ||||||||||||||| |||||  || ||  ||||||| |    
T  22354367 gagcctctactcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctatccaggttcaatctcatcctacgttatttcctaatcatt 22354268  T
Q  191 attagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    || ||||||||| || ||||||||||||| ||||||||||    
T  22354267 ataagacatgttcaagcactcaaaagcatataaggttcaa 22354228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 22 - 230
Target Start/End: Original strand, 22532515 - 22532734
Alignment:
Q  22 ggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtgg 120  Q
    |||||||||||| ||   |||||| |||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||    
T  22532515 ggttcaactctcaacagctcgtgcaacaaaggtcgcaaaatcctaacaagtcactctgtttttgggtcactcgcgaggcgagagcctctgctcaccgtgg 22532614  T
Q  121 cgagttcaggttagaatcccatcagtt----------taattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacact 210  Q
    |||||||| || ||| | |||  ||||          |  |||||||||||||||| ||||| ||||||  ||||||| ||||||||||||| |  ||||    
T  22532615 cgagttcaagtcagatttccaaaagttcattctacaatccttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcact 22532714  T
Q  211 caaaagcatctaaggttcaa 230  Q
    ||||||||||||||| ||||    
T  22532715 caaaagcatctaaggatcaa 22532734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 34510006 - 34510239
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    |||||| ||| |||||| | |||||||| ||| || | |||||| ||||||||||||||| || |||| | |||||||||||| ||||||||| ||||||    
T  34510006 aagtctcaatactaccccaaggttcaaccctcaacaactcgtgcaacaaaggtcgcaaaaacctaacatgacactctgtttctgggtcactcgtgaggcg 34510105  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaatcccatcagtt----------taattccaggttcaatctcgtcctatattcttcactaatcaat 190  Q
    ||||||||||||||||||||||||||||||| ||| | |||  ||||          |  |||||||||||||||| ||||| ||||||  ||||||| |    
T  34510106 agagcctctgctcgccgtggcgagttcaggtcagatttccaaaagttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcatt 34510205  T
Q  191 attagacatgttgaaacactcaaaagcatctaag 224  Q
    |||||||||||| |  ||||||||||||||||||    
T  34510206 attagacatgttcaggcactcaaaagcatctaag 34510239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 13 - 230
Target Start/End: Original strand, 433244 - 433472
Alignment:
Q  13 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctg 110  Q
    |||||| | |||||||||||| |||| ||||||||||||| |||||||||||  |||||| || | ||   || ||||||||||||||||||||||||||    
T  433244 ctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattttgcaactgggtcactcgcgaggcgagagcctctg 433342  T
Q  111 ctcgccgtggcgagttcaggttagaatccca-----tcagtttaa-----ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatg 200  Q
    |||||| |||||||||||||| ||| |||||     ||| | |||     |||||||||||||||| | ||| ||||||  ||||||| || ||||||||    
T  433343 ctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttcaatctcattctacattctttcctaatcattaatagacatg 433442  T
Q  201 ttgaaacactcaaaagcatctaaggttcaa 230  Q
    || | |||||||||||||||||||| ||||    
T  433443 ttcagacactcaaaagcatctaaggatcaa 433472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 225
Target Start/End: Original strand, 20135415 - 20135647
Alignment:
Q  4 gtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgag 102  Q
    |||||| | |||||| | |||||||||||| || | |||| | |||||||||||| || || ||||||||||||||||||| ||| |||||||||| |||    
T  20135415 gtcttactactaccctaaggttcaactctcaacaactcgtacaacaaaggtcgcataaacctaacaagtcactctgtttctgggttactcgcgaggtgag 20135514  T
Q  103 agcctctgctcgccgtggcgagttcaggttagaatccca-------tcagtttaa----ttccaggttcaatctcgtcctatattcttcactaatcaata 191  Q
    ||| |||||||||| |||||||||| ||| ||||| |||       ||| | |||    |||||||| ||||||| ||||| ||||||  ||||||| ||    
T  20135515 agcttctgctcgccatggcgagttc-ggtcagaattccaaaatgtttcattctaagtctttccaggtccaatctcatcctacattctttcctaatcatta 20135613  T
Q  192 ttagacatgttgaaacactcaaaagcatctaagg 225  Q
    ||||||||||| || |||||||||||||||||||    
T  20135614 ttagacatgttcaagcactcaaaagcatctaagg 20135647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 89 - 132
Target Start/End: Original strand, 21754350 - 21754393
Alignment:
Q  89 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtt 132  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  21754350 actcgcgaggcgagagcctctgctcgccatggcgagttcaggtt 21754393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 33681325 - 33681365
Alignment:
Q  91 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  33681325 tcgcgaggcgagagcctctgctcgccatggcgagttcaggt 33681365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 129
Target Start/End: Original strand, 20918917 - 20918956
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 129  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  20918917 ctcgcgaggcgagagcctctgctcgccatggcgagttcag 20918956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 132
Target Start/End: Original strand, 21162080 - 21162122
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtt 132  Q
    ||||||||||||||||||||||||||| |||||||| ||||||    
T  21162080 ctcgcgaggcgagagcctctgctcgccatggcgagtacaggtt 21162122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 20637165 - 20637206
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  20637165 ctcgcgaggcgagagcctctactcgccatggcgagttcaggt 20637206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 20918990 - 20919066
Alignment:
Q  154 caggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||||||| | ||| ||||||  ||||||| ||||||||||||| |  ||||||||||||| ||||| ||||    
T  20918990 caggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatgtaaggatcaa 20919066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Complemental strand, 16375266 - 16375231
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagt 125  Q
    |||||||||||||||| |||||||||||||||||||    
T  16375266 ctcgcgaggcgagagcatctgctcgccgtggcgagt 16375231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 141
Target Start/End: Complemental strand, 20091281 - 20091230
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaatccca 141  Q
    ||||||||| |||| | |||||||||| |||||||||||||| |||||||||    
T  20091281 ctcgcgaggtgagaacatctgctcgccatggcgagttcaggtcagaatccca 20091230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Original strand, 21407653 - 21407688
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagt 125  Q
    |||||||||||||||| |||||||||||||||||||    
T  21407653 ctcgcgaggcgagagcatctgctcgccgtggcgagt 21407688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Original strand, 52639839 - 52639874
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagt 125  Q
    |||||||||||||||| |||||||||||||||||||    
T  52639839 ctcgcgaggcgagagcatctgctcgccgtggcgagt 52639874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 132
Target Start/End: Original strand, 20248592 - 20248634
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtt 132  Q
    |||||||||||| ||||||| |||||| |||||||||||||||    
T  20248592 ctcgcgaggcgatagcctctactcgccatggcgagttcaggtt 20248634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 22921672 - 22921635
Alignment:
Q  91 tcgcgaggcgagagcctctgctcgccgtggcgagttca 128  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  22921672 tcgcgaggcgagagcctctactcgccatggcgagttca 22921635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 130
Target Start/End: Original strand, 26065254 - 26065295
Alignment:
Q  89 actcgcgaggcgagagcctctgctcgccgtggcgagttcagg 130  Q
    ||||||||||||||||||||| |||||  |||||||||||||    
T  26065254 actcgcgaggcgagagcctctactcgctatggcgagttcagg 26065295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 28194254 - 28194213
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    |||||||||||||||||||| || ||| ||||||||||||||    
T  28194254 ctcgcgaggcgagagcctctacttgccatggcgagttcaggt 28194213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 35981492 - 35981451
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    |||||||||||||||||||| ||| || ||||||||||||||    
T  35981492 ctcgcgaggcgagagcctctactcaccatggcgagttcaggt 35981451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 21301242 - 21301194
Alignment:
Q  182 ctaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||| ||||||||||||| |  ||||||||||||||||||| ||||    
T  21301242 ctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaa 21301194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 22921571 - 22921523
Alignment:
Q  182 ctaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||| ||||||||||||| |  ||||||||| ||||||||||||||    
T  22921571 ctaatcattattagacatgttcaggcactcaaaaacatctaaggttcaa 22921523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 45310175 - 45310135
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcagg 130  Q
    |||||||||||||||| |||||||||| |||||||| ||||    
T  45310175 ctcgcgaggcgagagcatctgctcgccatggcgagtacagg 45310135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 52927786 - 52927746
Alignment:
Q  91 tcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  52927786 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 52927746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 5 - 230
Target Start/End: Original strand, 6839 - 7064
Alignment:
Q  5 tcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagag 104  Q
    ||||||| |||||||| ||||||||||||||| | |||||| ||||||||||||||||| |||| |||||||||||| | ||||||||||||||||||||    
T  6839 tcttaatcctacccaaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacatgtcactctgtttatgggtcactcgcgaggcgagag 6938  T
Q  105 cctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttga 204  Q
    ||||||||||||||||||||||||||| || |||||   ||||||||||||||||||||||| ||||| |||| |  ||||| | ||||||||| ||| |    
T  6939 cctctgctcgccgtggcgagttcaggtcagcatccctcaagtttaattccaggttcaatctcatcctacattccttcctaataattattagacacgttca 7038  T
Q  205 aacactcaaaagcatctaaggttcaa 230  Q
      |||||||| |||||||||||||||    
T  7039 ggcactcaaaggcatctaaggttcaa 7064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 118; Significance: 2e-60; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 161 - 390
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa-tccaacaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    |||||||||| |||||||| ||||||||| ||||| | |||||| |||||||| |||||| || |||||||||||||  || | ||||||| ||||||||    
T  161 aagtcttaatcctacccaaaggttcaactgtcgacaactcgtgcaacaaaggttgcaaaaatctaacaagtcactcttattatgggtcacttgcgaggcg 260  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatg 200  Q
    |||||||||||||||| |||||||||||||| |||||||||  ||||||||||||| ||||||||| ||||| ||||||  ||||||| |||||||||||    
T  261 agagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttaattccagattcaatctcatcctacattctttcctaatcattattagacatg 360  T
Q  201 ttgaaacactcaaaagcatctaaggttcaa 230  Q
    || |  ||||||||||||||||||||||||    
T  361 ttcaggcactcaaaagcatctaaggttcaa 390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 4937 - 5166
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaa-tccaacaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    |||||||||| |||||||| ||||||||| ||||| | |||||| |||||||| |||||| || |||||||||||||  || | ||||||| ||||||||    
T  4937 aagtcttaatcctacccaaaggttcaactgtcgacaactcgtgcaacaaaggttgcaaaaatctaacaagtcactcttattatgggtcacttgcgaggcg 5036  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatg 200  Q
    |||||||||||||||| |||||||||||||| |||||||||  ||||||||||||| ||||||||| ||||| ||||||  ||||||| |||||||||||    
T  5037 agagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttaattccagattcaatctcatcctacattctttcctaatcattattagacatg 5136  T
Q  201 ttgaaacactcaaaagcatctaaggttcaa 230  Q
    || |  ||||||||||||||||||||||||    
T  5137 ttcaggcactcaaaagcatctaaggttcaa 5166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 13437 - 13665
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| ||| || | ||||||||| ||||| | |||||| ||||||||||||||||| |||||| ||||||| |||| |||||||||||||||||    
T  13437 aagtcttaatgctatcccaaggttcaactgtcgacaactcgtgcaacaaaggtcgcaaaatctaacaaggcactctgattctaggtcactcgcgaggcga 13536  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    |||||||||||||||||||||||||||||| ||||| |||  ||||| |||||||||||| |||| ||||| ||||||  ||||||| |||||||||| |    
T  13537 gagcctctgctcgccgtggcgagttcaggtcagaatgccacaagtttcattccaggttcagtctcatcctacattctttcctaatcattattagacattt 13636  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | |  ||||||||||||| ||||| ||||    
T  13637 tcaggcactcaaaagcatataaggatcaa 13665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 105; Significance: 1e-52; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 3707 - 3935
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||||| |||||||||||| || | |||||| ||||||||| |||| ||  ||||| |||||||||||  ||||||||||||| |||    
T  3707 aagtcttaatactacccaaaggttcaactctcaacaactcgtgcaacaaaggtcacaaagtctcacaaggcactctgtttccgggtcactcgcgagacga 3806  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    ||||||||||||||| |||||||||||||| |||||||||  ||||| ||||||||||||||||| ||||| ||||||  ||||||| || ||| |||||    
T  3807 gagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttcattccaggttcaatctcatcctacattctttcctaatcattactagtcatgt 3906  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | |  ||||||||  ||||||||||||||    
T  3907 tcaggcactcaaagtcatctaaggttcaa 3935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 7771 - 7999
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||||| |||||||||||| || | |||||| ||||||||| |||| ||  ||||| |||||||||||  ||||||||||||| |||    
T  7771 aagtcttaatactacccaaaggttcaactctcaacaactcgtgcaacaaaggtcacaaagtctcacaaggcactctgtttccgggtcactcgcgagacga 7870  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    ||||||||||||||| |||||||||||||| |||||||||  ||||| ||||||||||||||||| ||||| ||||||  ||||||| || ||| |||||    
T  7871 gagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttcattccaggttcaatctcatcctacattctttcctaatcattactagtcatgt 7970  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | |  ||||||||  ||||||||||||||    
T  7971 tcaggcactcaaagtcatctaaggttcaa 7999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 102; Significance: 8e-51; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 22 - 230
Target Start/End: Original strand, 20649 - 20868
Alignment:
Q  22 ggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggc 121  Q
    ||||||||||||||| | |||||| ||||||||||||||||| |||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  20649 ggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaaggcactctgtttctaggtcgctcgcgaggcgagagcctctgctcgccgtggc 20748  T
Q  122 gagttcaggttagaatcccatcagtttaa-----------ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacact 210  Q
    |||||||||| |||||||||  ||||| |           |||||||||||||||| ||||| ||||||  ||||||| ||||||||||||| |  ||||    
T  20749 gagttcaggtcagaatcccacaagtttcattctataatctttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcact 20848  T
Q  211 caaaagcatctaaggttcaa 230  Q
    ||||||||||||||| ||||    
T  20849 caaaagcatctaaggatcaa 20868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 1140 - 1368
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| ||||||||  ||||||||||| || | |||||| |||||||||||||| ||  ||||| |||| ||||||  ||||||||| |||||||    
T  1140 aagtcttaatactacccaaaagttcaactctcaacaactcgtgcaacaaaggtcgcaaagtctcacaaggcactttgtttccgggtcactcgtgaggcga 1239  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    ||||||||||||||| |||||||||| ||| |||||||||  ||||| ||||||||||||||||| ||||| ||||||  ||||||| ||||||  ||||    
T  1240 gagcctctgctcgccatggcgagttctggtcagaatcccacaagtttcattccaggttcaatctcatcctacattctttcctaatcattattagtaatgt 1339  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | |  |||||||| |||||||||||||||    
T  1340 tcaggcactcaaaggcatctaaggttcaa 1368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 40 - 230
Target Start/End: Original strand, 5113 - 5302
Alignment:
Q  40 tcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaatcc 139  Q
    |||||| |||||||| |||||| | ||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||| |||| |     
T  5113 tcgtgcaacaaaggtggcaaaa-ctaacaagtcactctgtttctaggtcactcgcgaggcaagagcctctactcgccgtggcgagttcaggtcagaacct 5211  T
Q  140 catcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||  ||||| ||||||||||||||||| ||||| ||||||  ||||||| |||||||||| || |  ||||||||||||||||||||||||    
T  5212 cacaagtttcattccaggttcaatctcatcctacattctttcctaatcattattagacatcttcatgcactcaaaagcatctaaggttcaa 5302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 99; Significance: 5e-49; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 51780 - 51540
Alignment:
Q  1 caagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    ||||||||||| |||||| | ||||||||||||||| | |||||| ||||||||||||||||| ||||||||||||||||||| ||||||| |||||| |    
T  51780 caagtcttaatgctaccccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaagtcactctgtttctgggtcactagcgaggtg 51681  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaa-----------ttccaggttcaatctcgtcctatattcttcactaatcaa 189  Q
    ||||||||||||||||||||||||||||||| | |||||||  ||||| |           |||||||||||||||| ||||| |||||   |||||||     
T  51680 agagcctctgctcgccgtggcgagttcaggtcaaaatcccacaagtttcattcgacaatctttccaggttcaatctcatcctacattctctcctaatcat 51581  T
Q  190 tattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||| ||||||| |  ||||||||||||||||||| ||||    
T  51580 tattaaacatgttcaggcactcaaaagcatctaaggatcaa 51540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 131
Target Start/End: Original strand, 32799 - 32892
Alignment:
Q  40 tcgtgcgacaaaggtcgcaa--aatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    ||||||||||||| |||||   || |||||||| || |||||  || |||  ||||||||||||| |||||| |||||| ||||||||||||||    
T  32799 tcgtgcgacaaagatcgcatttaacccaacaaggcattctgtaactgggtagctcgcgaggcgagggcctctactcgccatggcgagttcaggt 32892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 95; Significance: 1e-46; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 2 - 223
Target Start/End: Original strand, 3696 - 3928
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||| |  |||||| |||| || | |||||| ||||||||||||||| | ||||| ||||||||||| | |||||||||||||||||    
T  3696 aagtcttaatactaccccaaagttcaattctcaacaactcgtgcaacaaaggtcgcaaaacctaacaactcactctgtttttgggtcactcgcgaggcga 3795  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtt-----------taattccaggttcaatctcgtcctatattcttcactaatcaat 190  Q
    |||||||||||||||||||||||||||||| |||||||||  ||||           | ||||||||||||||||| ||||| ||||||  ||||||| |    
T  3796 gagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttgattctacaatcattccaggttcaatctcatcctacattctttcctaatcatt 3895  T
Q  191 attagacatgttgaaacactcaaaagcatctaa 223  Q
    |||||||||||| | ||||||||||||||||||    
T  3896 attagacatgttcagacactcaaaagcatctaa 3928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 568 - 807
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    |||||| ||| |||||| | |||||||||||| || | || ||| |||||||| |||||| || |||||| |||||||||||| ||||||||||||||||    
T  568 aagtctcaatactaccccaaggttcaactctcaacaactcatgcaacaaaggttgcaaaaacctaacaagacactctgtttctgggtcactcgcgaggcg 667  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaatccca-----tcagtttaa-----ttccaggttcaatctcgtcctatattcttcactaatcaat 190  Q
    ||||||||| ||||||| ||||||||||| | ||| ||| |     ||| | |||     ||| |||||||||||| | ||| ||||||  ||||||| |    
T  668 agagcctctactcgccgcggcgagttcagttcagattccaaaagtttcattctaaattctttctaggttcaatctcattctacattcttttctaatcatt 767  T
Q  191 attagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||| |  ||||||||||||||||||| ||||    
T  768 attagacatgttcaggcactcaaaagcatctaaggatcaa 807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 38986 - 39224
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    |||||||||| |||||| | |||||||||||| || | |||||| ||||||||||||||| || ||||||||||| ||||||| ||||||||||||||||    
T  38986 aagtcttaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagtcactatgtttctgggtcactcgcgaggcg 39085  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaa----------ttccaggttcaatctcgtcctatattcttcactaatcaat 190  Q
    ||||||||||||||||||||||||||||||| ||||| |||  ||||| |          |||||||||||||||| | ||| ||||||  ||||||| |    
T  39086 agagcctctgctcgccgtggcgagttcaggtcagaat-ccacaagtttcattcaaaatctttccaggttcaatctcattctacattctttcctaatcatt 39184  T
Q  191 attagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||| |  ||||||||||||||||||| ||||    
T  39185 attagacatgttcaggcactcaaaagcatctaaggatcaa 39224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 24196 - 23958
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| ||| || |  |||||||||||||| | |||||| ||||||||||||||||| |||||| |||| ||||||| |||||||||||||||||    
T  24196 aagtcttaatactatcccaaagttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaaggcactttgtttctaggtcactcgcgaggcga 24097  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaa----------ttccaggttcaatctcgtcctatattcttcactaatcaata 191  Q
    |||||||||||||| ||||||||||||||| |||||||||  ||||| |          |||||||||||||||| ||||| ||| ||  ||||||| ||    
T  24096 gagcctctgctcgctgtggcgagttcaggtcagaatcccacaagtttcattctacaattttccaggttcaatctcatcctacattttttcctaatcatta 23997  T
Q  192 ttagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||||| |  |||||||||| |||||||| ||||    
T  23996 ttagacatgttcaggcactcaaaagaatctaaggatcaa 23958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 92; Significance: 8e-45; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 124811 - 125047
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| ||| || | ||||||||||||||| | |||||| ||||||||||||||||| |||||| |||||| ||||| |||||||||||||||||    
T  124811 aagtcttaatgctatcccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatctaacaagacactctttttctgggtcactcgcgaggcga 124910  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattc-----------caggttcaatctcgtcctatattcttcactaatcaat 190  Q
    |||||||||||||||||||||||||||||| |||||||||  ||||| ||||           |||||||   ||| ||||| ||||||  ||||||| |    
T  124911 gagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttc---ctcatcctacattctttcctaatcatt 125007  T
Q  191 attagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||| |  ||||||||||||||||||| ||||    
T  125008 attagacatgttcaggcactcaaaagcatctaaggatcaa 125047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 130
Target Start/End: Complemental strand, 136173 - 136132
Alignment:
Q  89 actcgcgaggcgagagcctctgctcgccgtggcgagttcagg 130  Q
    ||||||||||||||||||||| |||||  |||||||||||||    
T  136173 actcgcgaggcgagagcctctactcgctatggcgagttcagg 136132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 130
Target Start/End: Complemental strand, 144881 - 144840
Alignment:
Q  89 actcgcgaggcgagagcctctgctcgccgtggcgagttcagg 130  Q
    ||||||||||||||||||||| |||||  |||||||||||||    
T  144881 actcgcgaggcgagagcctctactcgctatggcgagttcagg 144840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 85; Significance: 1e-40; HSPs: 3)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 23 - 230
Target Start/End: Original strand, 13339 - 13557
Alignment:
Q  23 gttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggcg 122  Q
    ||||||||||| || | |||||| ||||||||||||||| | |||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  13339 gttcaactctcaacaactcgtgcaacaaaggtcgcaaaacctaacaagacactcagtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcg 13438  T
Q  123 agttcaggttagaatcccatcagtttaattc-----------caggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactc 211  Q
    ||||||||| |||||||||  ||||| ||||           ||| ||||||||| ||||| ||||||  |||||||  |||||||||||| |  |||||    
T  13439 agttcaggtcagaatcccacaagtttcattctacaatcttttcagattcaatctcatcctacattctttcctaatcataattagacatgttcaggcactc 13538  T
Q  212 aaaagcatctaaggttcaa 230  Q
    |||||||||||||| ||||    
T  13539 aaaagcatctaaggatcaa 13557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 34509 - 34585
Alignment:
Q  154 caggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||||||| | ||| ||||||  ||||||| ||||||||||||| |  ||||||||||||||||||||||||    
T  34509 caggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaa 34585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 127
Target Start/End: Original strand, 34437 - 34473
Alignment:
Q  91 tcgcgaggcgagagcctctgctcgccgtggcgagttc 127  Q
    |||||||||||||||||||||||||| ||||||||||    
T  34437 tcgcgaggcgagagcctctgctcgccatggcgagttc 34473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 21137 - 21355
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||||||| |||||||||||   | | |||||| |||||||||||||||  |||||||||||||||||| | |||||||| ||||||||    
T  21137 aagtcttaatactacccaaaggttcaactctgatcaactcgtgcaacaaaggtcgcaaaactcaacaagtcactctgtttttgggtcactcacgaggcga 21236  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgt 201  Q
    |||||||||||||||||||||||||||||          |  ||||| ||||||||| ||||||| ||||| ||||||   |||||| ||||||||||||    
T  21237 gagcctctgctcgccgtggcgagttcagg----------acaagtttcattccaggtacaatctcatcctacattctttcataatcattattagacatgt 21326  T
Q  202 tgaaacactcaaaagcatctaaggttcaa 230  Q
    | |  |||| |||| ||||||||||||||    
T  21327 tcaggcactaaaaaacatctaaggttcaa 21355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 82; Significance: 7e-39; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 2077 - 2316
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| ||| || | ||||||||||||||| | |||||| ||||||||| ||||||| |||||| ||||||||||   ||||||||| |||||||    
T  2077 aagtcttaatactatcccaaggttcaactctcgacaactcgtgcaacaaaggtcacaaaatctaacaaggcactctgttttagggtcactcgtgaggcga 2176  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaa-----------ttccaggttcaatctcgtcctatattcttcactaatcaat 190  Q
     ||||||| |||||| |||||||||||||| |||||||||  ||||| |           |||||||||||||||| ||||| ||||||  ||||||| |    
T  2177 tagcctctactcgccatggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcatt 2276  T
Q  191 attagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||| |  ||||||||||||||||||| ||||    
T  2277 attagacatgttcaggcactcaaaagcatctaaggatcaa 2316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 207254 - 207175
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||||||| ||||| |||||   ||||||||||||||||||||| |  |||||||| |||||||||||||||    
T  207254 ttccaggttcaatctcatcctacattctctcctaatcaatattagacatgttcaggcactcaaaggcatctaaggttcaa 207175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 129
Target Start/End: Complemental strand, 207324 - 207285
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 129  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  207324 ctcgcgaggcgagagcctctgctcgccatggcgagttcag 207285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 17110 - 16871
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    |||||| ||| |||||| | |||| ||||||| || | |||||| |||||||||||||||||| || |||  ||||||||||| ||||||||||||||||    
T  17110 aagtctcaatactaccccaaggtttaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaataaggtactctgtttctgggtcactcgcgaggcg 17011  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaa----------ttccaggttcaatctcgtcctatattcttcactaatcaat 190  Q
    ||||||||||||| ||||||||||||||||| ||||| |||  ||||| |          |||||||||||||||| | ||| ||||||  ||||||| |    
T  17010 agagcctctgctctccgtggcgagttcaggtcagaattccaaaagtttcattctaaatctttccaggttcaatctcattctacattctttcctaatcatt 16911  T
Q  191 attagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||| |  ||||||||||||||||||| ||||    
T  16910 attagacatgttcaggcactcaaaagcatctaaggatcaa 16871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 230
Target Start/End: Complemental strand, 79096 - 79018
Alignment:
Q  152 tccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||||||||| | ||| |||| |  ||||||| ||||| ||||||| |  ||||||||||||||||||||||||    
T  79096 tccaggttcaatctcattctacattccttcctaatcattattaaacatgttcatgcactcaaaagcatctaaggttcaa 79018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 6016 - 5777
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| ||| || | ||||| ||||||||  | |||||| ||||||||||||||||| |||||| |||||||||||| |||||||  ||||||||    
T  6016 aagtcttaatgctatcccaaggttccactctcgataactcgtgcaacaaaggtcgcaaaatctaacaaggcactctgtttctgggtcactaacgaggcga 5917  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaatt-----------ccaggttcaatctcgtcctatattcttcactaatcaat 190  Q
    |||||||||||||||||||| ||||||||| ||||||||   | ||| |||           |||||||||||||| ||||| | ||||  ||||||| |    
T  5916 gagcctctgctcgccgtggcaagttcaggtcagaatcccgcaaatttcattcaataatcttcccaggttcaatctcatcctacaatctttcctaatcatt 5817  T
Q  191 attagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||| |  ||||||||||||||||||| ||||    
T  5816 attagacatgttcaggcactcaaaagcatctaaggatcaa 5777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 8701 - 8940
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||||||| |||| | | |||||||||||| || | |||||| ||||||||||||||| | |||||| |||||||||||| ||||| |||||||||||    
T  8701 aagtcttaatactactccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaacctaacaagacactctgtttctgggtcattcgcgaggcga 8800  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatcccatcagtt-----------taattccaggttcaatctcgtcctatattcttcactaatcaat 190  Q
    |||||||| || |||||||||||||||||| |||||||||  ||||           |  ||| |||||||||||| ||||| ||||||  ||||||| |    
T  8801 gagcctctactggccgtggcgagttcaggtcagaatcccacaagttccattttacaatctttctaggttcaatctcatcctacattctttcctaatcact 8900  T
Q  191 attagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||| || |  ||||||||||||||||||| ||||    
T  8901 attagacatattcaggcactcaaaagcatctaaggatcaa 8940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 40 - 230
Target Start/End: Complemental strand, 25922 - 25721
Alignment:
Q  40 tcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaatc 138  Q
    |||||| |||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| |     
T  25922 tcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagattt 25823  T
Q  139 cca-----tcagttta-----attccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttc 228  Q
    |||     ||| | ||      || ||||||||||||| ||||| ||||||  ||||||| ||||||||||||| |  ||||||||| ||||||||| ||    
T  25822 ccaaaaattcattctacaatcttttcaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaaccatctaaggatc 25723  T
Q  229 aa 230  Q
    ||    
T  25722 aa 25721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 54 - 230
Target Start/End: Complemental strand, 33338 - 33150
Alignment:
Q  54 tcgcaaaatcca-acaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaa-- 150  Q
    |||||||||||  ||||| |||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||| ||| | |||  ||||| |      
T  33338 tcgcaaaatcctgacaaggcactctgtttctgggtcacacgcgaggcgagagcctttgctcgccgtggcgagttcaggtaagacttccaaaagtttcatt 33239  T
Q  151 ---------ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
             |||||||||||||||| ||||| ||||||  ||||||| ||||||||||||  |  |||||| |||||||||||| ||||    
T  33238 ctaaaatctttccaggttcaatctcatcctacattctttcctaatcattattagacatgtccaggcactcagaagcatctaaggatcaa 33150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 72; Significance: 7e-33; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 222
Target Start/End: Original strand, 40083 - 40313
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    |||||| ||| |||||||||| |||||||||| || ||| |||| |||||||||||||||||  |||||| ||||| |||||| |||||| |||||||||    
T  40083 aagtctcaatgctacccaagg-ttcaactctcaacaaattgtgcaacaaaggtcgcaaaatcataacaaggcactcggtttctaggtcacccgcgaggcg 40181  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaatccca-----tcagtttaa-----ttccaggttcaatctcgtcctatattcttcactaatcaat 190  Q
    ||||||||||||||||||||||||| |||||||||| || |     ||| | ||      |||||||||||||||| ||||  ||||||  ||||||| |    
T  40182 agagcctctgctcgccgtggcgagtacaggttagaaaccaaaagtttcattctacaatctttccaggttcaatctcatcctccattctttcctaatcatt 40281  T
Q  191 attagacatgttgaaacactcaaaagcatcta 222  Q
    |||||||||||| |  ||||||||||||||||    
T  40282 attagacatgttcaggcactcaaaagcatcta 40313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 26121 - 26213
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcg 93  Q
    |||||| ||| |||||| | |||||||||||| || |||||||| |||||||||||||||||| |||||| ||||  |||||| |||||||||    
T  26121 aagtctcaatgctaccccaaggttcaactctcaacaaatcgtgcaacaaaggtcgcaaaatcctaacaaggcacttggtttctgggtcactcg 26213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 127
Target Start/End: Complemental strand, 59308 - 59271
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttc 127  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  59308 ctcgcgaggcgagagcctctgctcgccatggcgagttc 59271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 39666 - 39587
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||||||| | ||| ||||||  ||||||| || |||||||||| |   |||||||||||||||||| ||||    
T  39666 ttccaggttcaatctcattctacattctttcctaatcattaatagacatgttcaggtactcaaaagcatctaaggatcaa 39587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 339845 - 339706
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcga 101  Q
    |||||| ||| |||||| | |||||||| ||  |||| |||||| ||||||||||||||| | |||||| |||||| ||||| |||||||||||||||||    
T  339845 aagtctcaatactaccccaaggttcaacccttaacgactcgtgcaacaaaggtcgcaaaacctaacaaggcactctatttctgggtcactcgcgaggcga 339746  T
Q  102 gagcctctgctcgccgtggcgagttcaggttagaatccca 141  Q
    ||||||||||||||||||||||||||| || ||| |||||    
T  339745 gagcctctgctcgccgtggcgagttcatgtcagattccca 339706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 42 - 230
Target Start/End: Complemental strand, 16455 - 16255
Alignment:
Q  42 gtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaatccc 140  Q
    |||||||| || ||||||||||| |||||| |||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||| | ||    
T  16455 gtgcgacacagatcgcaaaatcccaacaaggcactctgtttttgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggttagatttcc 16356  T
Q  141 atcagtttaa-----------ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttca 229  Q
    |   |||| |           |||||||||||||||| | ||| ||||||  ||||||| ||||||||||||| |  ||||||||||||||||||| |||    
T  16355 aaacgtttcattcgaaaatctttccaggttcaatctcattctaaattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatca 16256  T
Q  230 a 230  Q
    |    
T  16255 a 16255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 23 - 220
Target Start/End: Complemental strand, 8406 - 8198
Alignment:
Q  23 gttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggcg 122  Q
    ||||||||||| || | |||||| || |||||||||||| | |||||| |||||||||||| ||||||||||||||||||||||||| ||| ||||||||    
T  8406 gttcaactctcaacaactcgtgcaacgaaggtcgcaaaacctaacaagacactctgtttctgggtcactcgcgaggcgagagcctctactcaccgtggcg 8307  T
Q  123 agttcaggttagaatcccatcagtttaa-----------ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactc 211  Q
    |||| |||  ||||| |||  ||||| |           |||||||||||||||| ||||| ||||||  ||||||| ||||||||||||| |  |||||    
T  8306 agtttaggccagaattccaaaagtttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactc 8207  T
Q  212 aaaagcatc 220  Q
    |||||||||    
T  8206 aaaagcatc 8198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 67; Significance: 6e-30; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 40138 - 40268
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    |||||| ||| |||||| | |||||||||||| || | |||||| ||||||||||||||  || ||||||  ||||||||||| ||||||||||||||||    
T  40138 aagtctcaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaacacctaacaaggtactctgtttctgggtcactcgcgaggcg 40237  T
Q  101 agagcctctgctcgccgtggcgagttcaggt 131  Q
    ||||||||| |||||||||||||||||||||    
T  40238 agagcctctactcgccgtggcgagttcaggt 40268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 40300 - 40376
Alignment:
Q  154 caggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||||||| ||||| |||| |  ||||||| || || ||||||| |  ||||||||||||||||||| ||||    
T  40300 caggttcaatctcatcctacattccttcctaatcattaataaacatgttcaggcactcaaaagcatctaaggatcaa 40376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 23108 - 23236
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    |||||| ||| |||||| | |||||||||||| || | |||||| ||||||||||||||| || |||||| |||||||||||| ||||||||||||||||    
T  23108 aagtctcaatactaccccaaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagacactctgtttctaggtcactcgcgaggcg 23207  T
Q  101 agagcctctgctcgccgtggcgagttcag 129  Q
    || |||||||||||| |||||||| ||||    
T  23208 agggcctctgctcgctgtggcgagctcag 23236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 23268 - 23347
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||| | ||||||| ||||| ||||||  ||||||| ||||||||||||| |  |||||||| |||||||||| ||||    
T  23268 ttccagatccaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaggcatctaaggatcaa 23347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 39742 - 39832
Alignment:
Q  42 gtgcgacaaaggtcgcaaaatcca-acaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    |||||||| || |||||||||||  ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  39742 gtgcgacacagatcgcaaaatcctgacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 39832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 75070 - 74980
Alignment:
Q  42 gtgcgacaaaggtcgcaaaatcca-acaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    |||||||| || |||||||||||  ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  75070 gtgcgacacagatcgcaaaatcctgacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 74980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 28056 - 28192
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcca-acaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    |||||| ||| |||||| | |||||||||||  || | | |||||||| || | |||||||||  ||||| |||||||||||| ||||||||||||||||    
T  28056 aagtctcaatactaccccaaggttcaactcttaacaacttgtgcgacacagattgcaaaatcctgacaaggcactctgtttctgggtcactcgcgaggcg 28155  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaat 137  Q
    ||||||| ||||||||||||||||||||||| |||||    
T  28156 agagcctttgctcgccgtggcgagttcaggtcagaat 28192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 225
Target Start/End: Original strand, 28924 - 28996
Alignment:
Q  153 ccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaagg 225  Q
    |||||||||||||| | ||| ||||||  ||||||| ||||||||||||| |   ||||||||||||||||||    
T  28924 ccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggaactcaaaagcatctaagg 28996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 230
Target Start/End: Complemental strand, 838 - 618
Alignment:
Q  22 ggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtgg 120  Q
    |||||||||||| ||   |||||| |||||||||| ||||||| |||||| | |||||||||| |||||||| ||||||| || |||||||||||| |||    
T  838 ggttcaactctcaacagctcgtgcaacaaaggtcgaaaaatcctaacaagactctctgtttctaggtcactcacgaggcgggaacctctgctcgccatgg 739  T
Q  121 cgagttcaggttagaatcccatc-agtttaatt----------ccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacac 209  Q
    ||||||||||| ||| | ||| | ||||| |||          |||||||||||||||| ||| | ||||  ||||||| ||||||||||||| |  |||    
T  738 cgagttcaggtcagatttccaacaagtttcattctctactaaaccaggttcaatctcgttctacaatctttcctaatcattattagacatgttcaggcac 639  T
Q  210 tcaaaagcatctaaggttcaa 230  Q
    |||||||||||||||| ||||    
T  638 tcaaaagcatctaaggatcaa 618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 4733 - 4973
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    |||||| ||| |||||| | |||||||||||  || | | ||||||||  | ||||||||||| ||| ||  || |||||||| |||||||||||| |||    
T  4733 aagtctcaatactaccccaaggttcaactcttaacaacttgtgcgacactgatcgcaaaatcctaactaggtaccctgtttctgggtcactcgcgaagcg 4832  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaatccca-----tcagtttaa------ttccaggttcaatctcgtcctatattcttcactaatcaa 189  Q
    |||||||||||||||| |||||||||||||| ||| |||||     ||| | |||      |||||||||||||||| | ||| ||||||  |||||||     
T  4833 agagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaaatctttccaggttcaatctcattctacattcttttctaatcat 4932  T
Q  190 tattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||||||| |  ||||||||||||||||||| ||||    
T  4933 tattagacatgttcaggcactcaaaagcatctaaggatcaa 4973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 12315 - 12555
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    |||||| ||| |||||| | |||||||||||  || | | ||||||||  | ||||||||||| ||| ||  || |||||||| |||||||||||| |||    
T  12315 aagtctcaatactaccccaaggttcaactcttaacaacttgtgcgacactgatcgcaaaatcctaactaggtaccctgtttctgggtcactcgcgaagcg 12414  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaatccca-----tcagtttaa------ttccaggttcaatctcgtcctatattcttcactaatcaa 189  Q
    |||||||||||||||| |||||||||||||| ||| |||||     ||| | |||      |||||||||||||||| | ||| ||||||  |||||||     
T  12415 agagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaaatctttccaggttcaatctcattctacattcttttctaatcat 12514  T
Q  190 tattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||||||| |  ||||||||||||||||||| ||||    
T  12515 tattagacatgttcaggcactcaaaagcatctaaggatcaa 12555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 22267 - 22507
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    |||||| ||| |||||| | |||||||||||  || | | ||||||||  | ||||||||||| ||| ||  || |||||||| |||||||||||| |||    
T  22267 aagtctcaatactaccccaaggttcaactcttaacaacttgtgcgacactgatcgcaaaatcctaactaggtaccctgtttctgggtcactcgcgaagcg 22366  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaatccca-----tcagtttaa------ttccaggttcaatctcgtcctatattcttcactaatcaa 189  Q
    |||||||||||||||| |||||||||||||| ||| |||||     ||| | |||      |||||||||||||||| | ||| ||||||  |||||||     
T  22367 agagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaaatctttccaggttcaatctcattctacattcttttctaatcat 22466  T
Q  190 tattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||||||| |  ||||||||||||||||||| ||||    
T  22467 tattagacatgttcaggcactcaaaagcatctaaggatcaa 22507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 42 - 230
Target Start/End: Original strand, 170 - 369
Alignment:
Q  42 gtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaatccc 140  Q
    |||||||| || ||||||||||| |||||| |||||||||||| ||||||||||| ||||||||||||| ||||| ||||||||||||||| ||||  |     
T  170 gtgcgacacagatcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgtggcgagagcctctactcgctgtggcgagttcaggtcagaactca 269  T
Q  141 atcagtttaa----------ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |  ||||| |          |||||||||||||||| ||||| ||||||  ||||||| ||||||||||||| |  ||||||||| ||| ||||| ||||    
T  270 aaaagtttcattctaaatctttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaaacatataaggatcaa 369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 10389 - 10525
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcg 100  Q
    |||||| ||| |||||| | |||||||||||  || | | |||||||| || ||||||||||| |||||| |||| ||||||| ||||||||||||||||    
T  10389 aagtctcaatactaccccaaggttcaactcttaacaacttgtgcgacacagatcgcaaaatcctaacaaggcactttgtttctaggtcactcgcgaggcg 10488  T
Q  101 agagcctctgctcgccgtggcgagttcaggttagaat 137  Q
     ||  |||||||||||||||||||||||||| |||||    
T  10489 ggaagctctgctcgccgtggcgagttcaggtcagaat 10525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 55; Significance: 9e-23; HSPs: 5)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 22 - 217
Target Start/End: Original strand, 16333 - 16539
Alignment:
Q  22 ggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtgg 120  Q
    |||||||||||| || | |||||| ||||||||||||||| || |||||| | |||||||||| ||||||| |||||| ||| ||||||| |||||||||    
T  16333 ggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagactctctgtttctgggtcacttgcgaggtgagggcctctgatcgccgtgg 16432  T
Q  121 cgagttcaggttagaatccca----tcagtt------taattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacact 210  Q
    |||| |||| | ||||| |||    ||| ||      |  |||||||||||||||||||||| ||||||  ||||||| ||||||||||||| |  ||||    
T  16433 cgagctcagttcagaattccaaaattcaattctacaatctttccaggttcaatctcgtcctacattctttcctaatcattattagacatgttcaggcact 16532  T
Q  211 caaaagc 217  Q
    |||||||    
T  16533 caaaagc 16539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 32843 - 32729
Alignment:
Q  13 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgc 111  Q
    |||||| | |||||||||||  || | | |||||||| || ||||||||||| |||||| || ||||||| | |||||||||||||||| |||||||| |    
T  32843 ctaccccaaggttcaactcttaacaattggtgcgacacagatcgcaaaatcctaacaagacattctgtttatgggtcactcgcgaggcgggagcctctcc 32744  T
Q  112 tcgccgtggcgagtt 126  Q
    |||| ||||||||||    
T  32743 tcgctgtggcgagtt 32729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 46162 - 46276
Alignment:
Q  13 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgc 111  Q
    |||||| | |||||||||||  || | | |||||||| || ||||||||||| |||||| || ||||||| | |||||||||||||||| |||||||| |    
T  46162 ctaccccaaggttcaactcttaacaattggtgcgacacagatcgcaaaatcctaacaagacattctgtttatgggtcactcgcgaggcgggagcctctcc 46261  T
Q  112 tcgccgtggcgagtt 126  Q
    |||| ||||||||||    
T  46262 tcgctgtggcgagtt 46276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 32663 - 32617
Alignment:
Q  182 ctaatcaatattagacatgttgaaacactcaaaagcatctaaggttc 228  Q
    ||||||| ||||||||||||| | |||||||||||||||||||||||    
T  32663 ctaatcattattagacatgttcagacactcaaaagcatctaaggttc 32617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 46342 - 46388
Alignment:
Q  182 ctaatcaatattagacatgttgaaacactcaaaagcatctaaggttc 228  Q
    ||||||| ||||||||||||| | |||||||||||||||||||||||    
T  46342 ctaatcattattagacatgttcagacactcaaaagcatctaaggttc 46388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 27 - 230
Target Start/End: Complemental strand, 1947 - 1734
Alignment:
Q  27 aactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggcgag 124  Q
    ||||||| |||| ||||||||||||| |||||||||||  |||||| || |||||  || |||||||||||||||||||||||||||||||| ||||||     
T  1947 aactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaag-cattctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgaa 1849  T
Q  125 ttcaggttagaatccca-----tcagtttaa-----ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaa 214  Q
    ||||||| ||| | |||     ||| | |||     |||||||||||||||| | ||| ||||||  ||||||| ||||||||||||| |  ||||||||    
T  1848 ttcaggtcagatttccaaagtttcattctaaaatctttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaa 1749  T
Q  215 agcatctaaggttcaa 230  Q
    | ||||||||| ||||    
T  1748 a-catctaaggatcaa 1734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 111 - 230
Target Start/End: Complemental strand, 13383 - 13264
Alignment:
Q  111 ctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacact 210  Q
    ||||||| ||| ||||||||| || ||||||  ||||| ||| |||| |||||||| ||||| ||||||  ||||||| ||||||||||||| |  ||||    
T  13383 ctcgccggggcaagttcaggtcaggatcccacaagtttcatttcaggctcaatctcatcctacattctttcctaatcattattagacatgttcaggcact 13284  T
Q  211 caaaagcatctaaggttcaa 230  Q
    ||||||||||||||||||||    
T  13283 caaaagcatctaaggttcaa 13264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 130
Target Start/End: Complemental strand, 6625 - 6561
Alignment:
Q  66 acaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcagg 130  Q
    ||||| |||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  6625 acaaggcactctatttctgggtcacttgcgaggcgagagcctctgctcgccgtggcgagttcagg 6561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 49; Significance: 4e-19; HSPs: 3)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 17026 - 17136
Alignment:
Q  22 ggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtg 119  Q
    ||||||||| || |||| |||||| |||||| |||||||||||  ||||||| | |||||   | |||||||||||||||||||||||||||||||| ||    
T  17026 ggttcaactatcaacgactcgtgctacaaagatcgcaaaatcctaaacaagt-attctgtaaataggtcactcgcgaggcgagagcctctgctcgccatg 17124  T
Q  120 gcgagttcaggt 131  Q
    ||||||||||||    
T  17125 gcgagttcaggt 17136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 230
Target Start/End: Original strand, 17167 - 17245
Alignment:
Q  152 tccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||||||||| | ||| ||||||  ||||||| ||||| ||||||| |  ||||||||||||||||||| ||||    
T  17167 tccaggttcaatctcattctacattctttcctaatcattattaaacatgttcaggcactcaaaagcatctaaggatcaa 17245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 129
Target Start/End: Complemental strand, 7576 - 7537
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 129  Q
    ||||||||||||||||||||||| ||| ||||||||||||    
T  7576 ctcgcgaggcgagagcctctgcttgccatggcgagttcag 7537  T

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Target: scaffold0876 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 2820 - 2741
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||||||| ||||| ||||||  ||||||| ||||||||||||| |  ||||||||||||||||||||||||    
T  2820 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaa 2741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 837 - 778
Alignment:
Q  72 cactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    |||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||    
T  837 cactctgtttctgggtcactcgcgaggcgagagcctccgctcaccgtggcgagttcaggt 778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 230
Target Start/End: Complemental strand, 741 - 669
Alignment:
Q  158 ttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||| | ||| ||||||  ||||||| ||||||||||||| |  ||||||||||||| ||||| ||||    
T  741 ttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatataaggatcaa 669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 8029 - 7950
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||||||| ||||| ||||||  ||||||||||||||||||||| |  |||||||| |||||||||||||||    
T  8029 ttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaaggcatctaaggttcaa 7950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 127
Target Start/End: Complemental strand, 8099 - 8062
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttc 127  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  8099 ctcgcgaggcgagagcctctgctcgccatggcgagttc 8062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 229
Target Start/End: Complemental strand, 12544 - 12466
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttca 229  Q
    |||||||||||||||| ||||| ||||||  ||||||||||||||||||||| |  |||||||| ||||||||||||||    
T  12544 ttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaaaggcatctaaggttca 12466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 12611 - 12575
Alignment:
Q  93 gcgaggcgagagcctctgctcgccgtggcgagttcag 129  Q
    |||||||||||||||||||||||| ||||||||||||    
T  12611 gcgaggcgagagcctctgctcgccatggcgagttcag 12575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 17882 - 17790
Alignment:
Q  2 aagtcttaattctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaacaagtcactctgtttctcggtcactcgc 94  Q
    |||||||||| |||||||| ||||||| |||| || | |||||| ||||||||||||||| | ||||||||||||| ||||| ||| ||||||    
T  17882 aagtcttaatactacccaaaggttcaattctcaacaactcgtgcaacaaaggtcgcaaaacctaacaagtcactctatttctgggtgactcgc 17790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 152 - 227
Target Start/End: Complemental strand, 17742 - 17667
Alignment:
Q  152 tccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggtt 227  Q
    ||||||||||||||| ||||| ||||||  ||||||| ||||||||||||| |  |||||||||||||||||||||    
T  17742 tccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggtt 17667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 141
Target Start/End: Complemental strand, 15499 - 15370
Alignment:
Q  13 ctacccaagggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatccaa--caagtcactctgtttctcggtcactcgcgaggcgagagcctctg 110  Q
    |||||| | |||||||||||| |||| ||||||||||||| ||| ||||||| |  ||||| | | |||   | ||||||||||||||||||||||||||    
T  15499 ctaccccaaggttcaactctcaacgattcgtgcgacaaagatcgaaaaatcctaagcaagt-attttgtaaataggtcactcgcgaggcgagagcctctg 15401  T
Q  111 ctcgccgtggcgagttcaggttagaatccca 141  Q
    |||||  |||||||||||||| ||| |||||    
T  15400 ctcgctatggcgagttcaggtcagattccca 15370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 10296 - 10375
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||||||| ||||| ||||||  |||||||||| |||||||||| |  |||||||| |||||||||||||||    
T  10296 ttccaggttcaatctcatcctacattctttcctaatcaataatagacatgtttaggcactcaaaggcatctaaggttcaa 10375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 129
Target Start/End: Original strand, 10226 - 10265
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 129  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  10226 ctcgcgaggcgagagcctctgctcgccatggcgagttcag 10265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 440 - 486
Alignment:
Q  85 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  440 ggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggt 486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 225
Target Start/End: Complemental strand, 18693 - 18619
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaagg 225  Q
    |||||||||||||||| ||||| ||||||  ||||||| ||||||||||||| |  |||||||||||||||||||    
T  18693 ttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 18619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 230
Target Start/End: Complemental strand, 2177 - 2101
Alignment:
Q  154 caggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||||||| | ||| ||||||  ||||||| ||||||||||||| |  ||||||||||||||||||||||||    
T  2177 caggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaa 2101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 127
Target Start/End: Complemental strand, 2250 - 2213
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttc 127  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  2250 ctcgcgaggcgagagcctctgctcgccatggcgagttc 2213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 230
Target Start/End: Original strand, 20426 - 20577
Alignment:
Q  89 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaa----------ttccaggttcaatctcgtcctatattct 178  Q
    |||||||||||||||||||||||||| ||||||||| |||||| ||||  |||  ||||| |          |||||||||||||||  | ||| |||||    
T  20426 actcgcgaggcgagagcctctgctcgtcgtggcgagctcaggtcagaactccaaaagtttcattctaaatctttccaggttcaatcttattctacattct 20525  T
Q  179 tcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |  ||||||| ||||||||||||| |  ||||||||||||||||||| ||||    
T  20526 ttcctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaa 20577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 414 - 492
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||||||| ||||| ||||||  ||||||||||||||||||||| |  ||||| || |||||||||||||||    
T  414 ttccaggttcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactc-aaggcatctaaggttcaa 492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 129
Target Start/End: Original strand, 344 - 383
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 129  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  344 ctcgcgaggcgagagcctctgctcgccatggcgagttcag 383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 29011 - 28936
Alignment:
Q  155 aggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||| | ||| ||||||  ||||||| ||||||||||||| |  ||||||||||||||||||||||||    
T  29011 aggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaa 28936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 89 - 132
Target Start/End: Complemental strand, 28616 - 28573
Alignment:
Q  89 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtt 132  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  28616 actcgcgaggcgagagcctctgctcgccatggcgagttcaggtt 28573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 28513 - 28465
Alignment:
Q  182 ctaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||| ||||||||||||| |  ||||||||||||||||||| ||||    
T  28513 ctaatcattattagacatgttcaggcactcaaaagcatctaaggatcaa 28465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 9569 - 9490
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||| ||||||||| ||||| ||||||   |||||||||||||||||||| |  |||||||| |||||||||||||||    
T  9569 ttccagattcaatctcatcctacattctttcgtaatcaatattagacatgttcaggcactcaaaggcatctaaggttcaa 9490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 129
Target Start/End: Complemental strand, 9639 - 9600
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 129  Q
    ||||||||||||||||||||||||||| || |||||||||    
T  9639 ctcgcgaggcgagagcctctgctcgccatgacgagttcag 9600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 4769 - 4872
Alignment:
Q  22 ggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc-aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtgg 120  Q
    |||||||||||  || | |||||| |||||||||||||||||| |||| | || ||||||||| |||  || ||||||||||||||| |||||||| |||    
T  4769 ggttcaactcttaacaactcgtgcaacaaaggtcgcaaaatcctaacatggcattctgtttctgggtagcttgcgaggcgagagcctttgctcgccatgg 4868  T
Q  121 cgag 124  Q
    ||||    
T  4869 cgag 4872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 4912 - 4988
Alignment:
Q  154 caggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||||||| | ||| | ||||| ||| ||| || |||||||||| |  ||||||||||||||||||||||||    
T  4912 caggttcaatctcattctacaatcttccctagtcattaatagacatgtttaggcactcaaaagcatctaaggttcaa 4988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 89 - 132
Target Start/End: Original strand, 132967 - 133010
Alignment:
Q  89 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtt 132  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  132967 actcgcgaggcgagagcctctgctcgccatggcgagttcaggtt 133010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Complemental strand, 58527 - 58492
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagt 125  Q
    |||||||||||||||| |||||||||||||||||||    
T  58527 ctcgcgaggcgagagcatctgctcgccgtggcgagt 58492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 19576 - 19622
Alignment:
Q  85 ggtcactcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||    
T  19576 ggtcattcgcgaggcgagagcctctgctcgccatggcgagttcaggt 19622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 24382 - 24310
Alignment:
Q  155 aggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggtt 227  Q
    |||||||||||| ||||| ||||||  ||||||||||||||||||||| |  |||||||  ||||||||||||    
T  24382 aggttcaatctcatcctaaattctttcctaatcaatattagacatgttcaggcactcaagggcatctaaggtt 24310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 129
Target Start/End: Complemental strand, 24456 - 24417
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 129  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  24456 ctcgcgaggcgagagcctctgctcgccatggcgagttcag 24417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 132
Target Start/End: Complemental strand, 2108 - 2065
Alignment:
Q  89 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtt 132  Q
    |||||||||||||||||||||||| ||| |||||||||||||||    
T  2108 actcgcgaggcgagagcctctgcttgccatggcgagttcaggtt 2065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 132
Target Start/End: Complemental strand, 2609 - 2566
Alignment:
Q  89 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtt 132  Q
    ||||||||||||||||||||| |||||| |||||||||||||||    
T  2609 actcgcgaggcgagagcctctactcgccatggcgagttcaggtt 2566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 132
Target Start/End: Original strand, 32397 - 32440
Alignment:
Q  89 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtt 132  Q
    |||||||||| ||||||||||||||||| |||||||||||||||    
T  32397 actcgcgaggtgagagcctctgctcgccatggcgagttcaggtt 32440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 202
Target Start/End: Complemental strand, 80067 - 80016
Alignment:
Q  151 ttccaggttcaatctcgtcctatattcttcactaatcaatattagacatgtt 202  Q
    |||||||||||||||| ||||| ||||||  |||||||||||||||||||||    
T  80067 ttccaggttcaatctcatcctacattctttcctaatcaatattagacatgtt 80016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 129
Target Start/End: Complemental strand, 80137 - 80098
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcag 129  Q
    ||||||||||||||||||||||||||| || |||||||||    
T  80137 ctcgcgaggcgagagcctctgctcgccatgtcgagttcag 80098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 230
Target Start/End: Original strand, 12315 - 12393
Alignment:
Q  152 tccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||||||||| | ||| ||||||  ||||||| ||||| |||| || | |||||||||||||||||||| ||||    
T  12315 tccaggttcaatctcattctacattctttcctaatcattattaaacatattcagacactcaaaagcatctaaggatcaa 12393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 12243 - 12285
Alignment:
Q  89 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    |||||||||| |||||||||| |||||| ||||||||||||||    
T  12243 actcgcgaggtgagagcctctactcgccatggcgagttcaggt 12285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 132
Target Start/End: Original strand, 9391 - 9433
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtt 132  Q
    |||||||||||||||||||| |||||| |||||||||||||||    
T  9391 ctcgcgaggcgagagcctctactcgccatggcgagttcaggtt 9433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 230
Target Start/End: Original strand, 587 - 728
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaatcccatcagt-ttaattccaggttcaatctcgtcctatattcttca-ctaatc 187  Q
    |||||||||||||||| |||||||||| |||||||| || | |||||| ||| || |  | |||||||||||||||| || ||| | || ||| ||||||    
T  587 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagctagaattccaacaatggttattccaggttcaatcttgttcta-agtcatcatctaatc 685  T
Q  188 aatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
      ||||| |||| || |  ||||||||||||||||||||||||    
T  686 tttattaaacatcttaaggcactcaaaagcatctaaggttcaa 728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 127
Target Start/End: Original strand, 15974 - 16011
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttc 127  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  15974 ctcgcgaggcgagagcctctgctcgccatggcgagttc 16011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 16047 - 16123
Alignment:
Q  154 caggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||||||| | ||| ||||||  ||||||| |||||||||| || |  ||||||||||||||||||| ||||    
T  16047 caggttcaatctcattctacattctttcctaatcattattagacatattcaggcactcaaaagcatctaaggatcaa 16123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 10540 - 10609
Alignment:
Q  161 aatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||| ||||| ||||||  ||||||| ||||||||||||| |  ||||||||||||||||||| ||||    
T  10540 aatctcatcctacattctttcctaatcattattagacatgttcatgcactcaaaagcatctaaggatcaa 10609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 45596 - 45555
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  45596 ctcgcgaggcgagagcctctactcgccatggcgagttcaggt 45555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 130222 - 130263
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    ||||||||||||||||||||||||||| ||||||||| ||||    
T  130222 ctcgcgaggcgagagcctctgctcgccatggcgagtttaggt 130263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 130
Target Start/End: Complemental strand, 60520 - 60479
Alignment:
Q  89 actcgcgaggcgagagcctctgctcgccgtggcgagttcagg 130  Q
    ||||||||||||||||||||| |||||  |||||||||||||    
T  60520 actcgcgaggcgagagcctctactcgctatggcgagttcagg 60479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 20300 - 20190
Alignment:
Q  22 ggttcaactctcgacgaatcgtgcgacaaaggtcgcaaaatcc--aacaagtcactctgtttctcggtcactcgcgaggcgagagcctctgctcgccgtg 119  Q
    |||||||||||| |||| |||||||||||||  ||||||||||  |||||| |  |||||   | ||  ||| ||||||||||||||||| |||||| ||    
T  20300 ggttcaactctcaacgactcgtgcgacaaagaccgcaaaatcctaaacaaggct-tctgtaattaggcaacttgcgaggcgagagcctctactcgccatg 20202  T
Q  120 gcgagttcaggt 131  Q
    ||||||||||||    
T  20201 gcgagttcaggt 20190  T

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Target: scaffold0676 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 141
Target Start/End: Original strand, 4738 - 4789
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggttagaatccca 141  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  4738 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagctagaatccca 4789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Complemental strand, 4910 - 4875
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagt 125  Q
    |||||||||||||||| |||||||||||||||||||    
T  4910 ctcgcgaggcgagagcatctgctcgccgtggcgagt 4875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Complemental strand, 61421 - 61386
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagt 125  Q
    |||||||||||||||| |||||||||||||||||||    
T  61421 ctcgcgaggcgagagcatctgctcgccgtggcgagt 61386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 123
Target Start/End: Complemental strand, 65337 - 65304
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcga 123  Q
    |||||||||||||||| |||||||||||||||||    
T  65337 ctcgcgaggcgagagcatctgctcgccgtggcga 65304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 132
Target Start/End: Original strand, 7126 - 7168
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtt 132  Q
    ||||| |||||||||||||| |||||| |||||||||||||||    
T  7126 ctcgcaaggcgagagcctctactcgccatggcgagttcaggtt 7168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 31; Significance: 0.00000002; HSPs: 3)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 10347 - 10305
Alignment:
Q  89 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  10347 actcgcgaggcgagagcctctactcgctttggcgagttcaggt 10305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 10278 - 10225
Alignment:
Q  176 tcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttca 229  Q
    |||| |||||||| ||||||||||||| |  ||||||||| |||||||||||||    
T  10278 tctttactaatcattattagacatgttcaggcactcaaaaacatctaaggttca 10225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 996 - 1044
Alignment:
Q  182 ctaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||||||||||||  | ||||||||  ||||||||||||||    
T  996 ctaatcaatattagacatgttctagcactcaaagacatctaaggttcaa 1044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 7864 - 7822
Alignment:
Q  89 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  7864 actcgcgaggcgagagcctctactcgctatggcgagttcaggt 7822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 7761 - 7713
Alignment:
Q  182 ctaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||| ||||| ||||||| | |||||||||| ||||||||||||||    
T  7761 ctaatcattattacacatgttcagacactcaaaaacatctaaggttcaa 7713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 10842 - 10884
Alignment:
Q  89 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    ||||||||||||||||||||| |||||  ||||||||||||||    
T  10842 actcgcgaggcgagagcctctactcgctatggcgagttcaggt 10884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 101709 - 101751
Alignment:
Q  89 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    |||| |||||| |||||||||||||||| ||||||||||||||    
T  101709 actcccgaggcaagagcctctgctcgccatggcgagttcaggt 101751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 13255 - 13296
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggt 131  Q
    ||||||||||||| |||||| |||||| ||||||||||||||    
T  13255 ctcgcgaggcgagggcctctactcgccatggcgagttcaggt 13296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 230
Target Start/End: Complemental strand, 10968 - 10928
Alignment:
Q  190 tattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    ||||||||||||| |  ||||||||||||||||||||||||    
T  10968 tattagacatgttcaggcactcaaaagcatctaaggttcaa 10928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 4033 - 3993
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcagg 130  Q
    |||||||||||||||| |||||||||| |||||||| ||||    
T  4033 ctcgcgaggcgagagcatctgctcgccatggcgagtacagg 3993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 230
Target Start/End: Complemental strand, 43520 - 43440
Alignment:
Q  150 attccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||||||||   ||| | ||||  |||||||  |||||||||||| |  ||||||||| ||||||||||||||    
T  43520 attccaggttcaatctcaatctagaatcttttctaatcataattagacatgttcaggcactcaaaaacatctaaggttcaa 43440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 230
Target Start/End: Complemental strand, 47440 - 47360
Alignment:
Q  150 attccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||||||||   ||| | ||||  |||||||  |||||||||||| |  ||||||||| ||||||||||||||    
T  47440 attccaggttcaatctcaatctagaatcttttctaatcataattagacatgttcaggcactcaaaaacatctaaggttcaa 47360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 125
Target Start/End: Original strand, 62556 - 62592
Alignment:
Q  89 actcgcgaggcgagagcctctgctcgccgtggcgagt 125  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  62556 actcgcgaggcgagagcatctgctcgccatggcgagt 62592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 128775 - 128735
Alignment:
Q  90 ctcgcgaggcgagagcctctgctcgccgtggcgagttcagg 130  Q
    |||||||||||||||||||| |||||  |||||||||||||    
T  128775 ctcgcgaggcgagagcctctactcgctatggcgagttcagg 128735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 230
Target Start/End: Complemental strand, 15566 - 15486
Alignment:
Q  150 attccaggttcaatctcgtcctatattcttcactaatcaatattagacatgttgaaacactcaaaagcatctaaggttcaa 230  Q
    |||||||||||||||||   ||||| ||||  |||||||  |||| ||||||| |  ||||||||| ||||||||||||||    
T  15566 attccaggttcaatctcaatctataatctttcctaatcatcattatacatgtttaggcactcaaaaacatctaaggttcaa 15486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 125
Target Start/End: Complemental strand, 192793 - 192757
Alignment:
Q  89 actcgcgaggcgagagcctctgctcgccgtggcgagt 125  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  192793 actcgcgaggcgagagcatctgctcgccatggcgagt 192757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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