View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18964_low_3 (Length: 506)

Name: NF18964_low_3
Description: NF18964
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18964_low_3
NF18964_low_3
[»] chr3 (64 HSPs)
chr3 (1-187)||(9173751-9173937)
chr3 (392-479)||(9172435-9172525)
chr3 (1-140)||(21289713-21289852)
chr3 (9-143)||(628830-628964)
chr3 (1-143)||(50194234-50194376)
chr3 (1-140)||(8914762-8914901)
chr3 (1-140)||(51303542-51303681)
chr3 (1-143)||(53807757-53807899)
chr3 (1-140)||(51923777-51923916)
chr3 (207-292)||(9173624-9173709)
chr3 (1-140)||(7546665-7546804)
chr3 (1-143)||(14859537-14859679)
chr3 (1-83)||(45568344-45568426)
chr3 (1-141)||(35175453-35175593)
chr3 (1-143)||(29922104-29922246)
chr3 (1-143)||(29971257-29971399)
chr3 (1-50)||(23799809-23799858)
chr3 (1-89)||(21533708-21533796)
chr3 (1-57)||(27706125-27706181)
chr3 (1-89)||(43488489-43488577)
chr3 (1-140)||(19339226-19339364)
chr3 (205-295)||(9172337-9172418)
chr3 (1-103)||(12050547-12050649)
chr3 (1-63)||(38860011-38860073)
chr3 (1-103)||(42460836-42460938)
chr3 (1-90)||(4711582-4711671)
chr3 (1-50)||(19619853-19619902)
chr3 (1-89)||(21431714-21431802)
chr3 (1-72)||(12946866-12946937)
chr3 (1-140)||(16235476-16235615)
chr3 (1-148)||(33579922-33580069)
chr3 (1-55)||(20987654-20987708)
chr3 (1-67)||(21313159-21313225)
chr3 (1-63)||(27856292-27856354)
chr3 (1-83)||(40487432-40487514)
chr3 (1-103)||(54149078-54149180)
chr3 (1-89)||(6954595-6954683)
chr3 (1-41)||(9998616-9998656)
chr3 (1-41)||(10108385-10108425)
chr3 (1-41)||(10229625-10229665)
chr3 (1-41)||(10233219-10233259)
chr3 (1-41)||(43017037-43017077)
chr3 (8-52)||(46220801-46220845)
chr3 (1-41)||(48650633-48650673)
chr3 (1-89)||(52923016-52923104)
chr3 (1-52)||(3085200-3085251)
chr3 (1-52)||(7792086-7792137)
chr3 (1-84)||(9797433-9797516)
chr3 (1-52)||(26739256-26739307)
chr3 (8-75)||(40556817-40556884)
chr3 (1-83)||(46304419-46304501)
chr3 (1-50)||(38545939-38545988)
chr3 (1-62)||(44805157-44805218)
chr3 (1-89)||(7448813-7448901)
chr3 (1-89)||(7456955-7457043)
chr3 (1-41)||(44959872-44959912)
chr3 (12-52)||(53508364-53508404)
chr3 (1-124)||(47896218-47896340)
chr3 (1-103)||(12149683-12149785)
chr3 (17-63)||(32246550-32246596)
chr3 (8-89)||(18011121-18011202)
chr3 (1-46)||(26275718-26275763)
chr3 (18-67)||(51487218-51487267)
chr3 (1-50)||(53099930-53099978)
[»] chr1 (45 HSPs)
chr1 (1-143)||(24583001-24583143)
chr1 (8-143)||(44915690-44915825)
chr1 (1-143)||(47132954-47133096)
chr1 (1-143)||(19060960-19061102)
chr1 (1-140)||(48750239-48750378)
chr1 (1-143)||(16262912-16263054)
chr1 (1-143)||(44543323-44543465)
chr1 (1-124)||(14872709-14872832)
chr1 (1-89)||(4413219-4413307)
chr1 (1-89)||(21947517-21947605)
chr1 (1-140)||(36775609-36775748)
chr1 (206-288)||(29406831-29406913)
chr1 (1-143)||(49626964-49627106)
chr1 (1-62)||(34412991-34413052)
chr1 (1-65)||(24583275-24583339)
chr1 (1-124)||(3228339-3228462)
chr1 (1-103)||(15492378-15492480)
chr1 (19-140)||(37720066-37720187)
chr1 (19-103)||(31317827-31317911)
chr1 (8-75)||(32679047-32679114)
chr1 (1-62)||(14489404-14489465)
chr1 (1-126)||(25564066-25564191)
chr1 (1-89)||(7337562-7337650)
chr1 (1-89)||(35484290-35484378)
chr1 (9-89)||(45415663-45415743)
chr1 (1-124)||(5983906-5984029)
chr1 (1-52)||(6217722-6217773)
chr1 (1-52)||(16161970-16162021)
chr1 (1-140)||(23291541-23291680)
chr1 (1-50)||(7836695-7836744)
chr1 (1-50)||(16989515-16989564)
chr1 (1-50)||(34878177-34878226)
chr1 (1-41)||(19596359-19596399)
chr1 (9-124)||(10776368-10776483)
chr1 (1-103)||(31919079-31919182)
chr1 (1-89)||(41740478-41740568)
chr1 (1-104)||(49504494-49504597)
chr1 (1-143)||(13144711-13144853)
chr1 (9-143)||(31692374-31692508)
chr1 (1-103)||(31984252-31984354)
chr1 (210-284)||(51163823-51163897)
chr1 (1-63)||(51373757-51373819)
chr1 (1-50)||(50377467-50377516)
chr1 (1-41)||(11462381-11462421)
chr1 (1-41)||(32395151-32395191)
[»] chr7 (38 HSPs)
chr7 (1-140)||(22742997-22743136)
chr7 (206-326)||(31238827-31238951)
chr7 (1-143)||(24069293-24069435)
chr7 (1-140)||(28476280-28476418)
chr7 (1-140)||(35133000-35133139)
chr7 (2-140)||(38880477-38880616)
chr7 (1-89)||(9450036-9450124)
chr7 (1-143)||(35665034-35665176)
chr7 (1-103)||(46700125-46700227)
chr7 (1-89)||(12141207-12141295)
chr7 (1-89)||(39171489-39171577)
chr7 (1-89)||(48061526-48061614)
chr7 (12-103)||(19404667-19404758)
chr7 (1-124)||(42978679-42978802)
chr7 (1-143)||(41553333-41553475)
chr7 (1-103)||(48930797-48930899)
chr7 (1-89)||(13796828-13796916)
chr7 (1-52)||(3398331-3398382)
chr7 (1-103)||(47590401-47590503)
chr7 (1-82)||(48316711-48316792)
chr7 (1-89)||(8001445-8001533)
chr7 (1-89)||(28044655-28044743)
chr7 (1-41)||(40993309-40993349)
chr7 (1-61)||(45349698-45349758)
chr7 (1-124)||(37837357-37837480)
chr7 (1-140)||(38798834-38798973)
chr7 (3-73)||(4999930-5000000)
chr7 (1-63)||(25287085-25287147)
chr7 (1-63)||(46244151-46244213)
chr7 (1-46)||(43369653-43369698)
chr7 (1-89)||(19296974-19297062)
chr7 (1-41)||(28407817-28407857)
chr7 (1-41)||(34899506-34899546)
chr7 (1-140)||(24770299-24770438)
chr7 (1-39)||(5348491-5348529)
chr7 (1-75)||(9977109-9977183)
chr7 (8-90)||(30756725-30756807)
chr7 (1-38)||(27341705-27341742)
[»] chr6 (35 HSPs)
chr6 (1-140)||(14801879-14802018)
chr6 (1-140)||(8102778-8102917)
chr6 (1-140)||(546082-546222)
chr6 (9-140)||(9380075-9380206)
chr6 (1-103)||(12170557-12170659)
chr6 (1-143)||(30493581-30493723)
chr6 (11-103)||(127758-127850)
chr6 (1-89)||(31296923-31297011)
chr6 (1-141)||(31852092-31852232)
chr6 (1-140)||(23128670-23128809)
chr6 (8-143)||(26588378-26588513)
chr6 (1-140)||(30776715-30776854)
chr6 (14-84)||(32327129-32327199)
chr6 (1-89)||(3913473-3913561)
chr6 (1-103)||(30608414-30608516)
chr6 (1-89)||(528249-528337)
chr6 (1-89)||(1523511-1523599)
chr6 (1-41)||(33053067-33053107)
chr6 (217-288)||(28844810-28844881)
chr6 (1-128)||(32191629-32191756)
chr6 (1-103)||(606293-606395)
chr6 (1-135)||(1933591-1933725)
chr6 (1-50)||(20225993-20226042)
chr6 (1-50)||(22119977-22120026)
chr6 (1-41)||(67900-67940)
chr6 (1-89)||(7976086-7976174)
chr6 (1-61)||(14846120-14846180)
chr6 (2-102)||(34018650-34018750)
chr6 (1-124)||(29255345-29255468)
chr6 (10-89)||(29743100-29743179)
chr6 (1-50)||(13546600-13546649)
chr6 (1-38)||(21426585-21426622)
chr6 (13-62)||(34185604-34185653)
chr6 (20-84)||(4010430-4010494)
chr6 (1-41)||(9341550-9341590)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-143)||(57987-58129)
[»] chr8 (48 HSPs)
chr8 (1-143)||(14916085-14916226)
chr8 (1-124)||(7677180-7677303)
chr8 (1-140)||(41896570-41896709)
chr8 (1-140)||(42046274-42046413)
chr8 (1-103)||(7198092-7198194)
chr8 (1-143)||(15344358-15344500)
chr8 (1-143)||(15433423-15433565)
chr8 (1-143)||(15524727-15524869)
chr8 (1-103)||(16247120-16247222)
chr8 (1-140)||(18890596-18890735)
chr8 (1-140)||(471061-471202)
chr8 (3-103)||(8867895-8867995)
chr8 (1-89)||(20553138-20553226)
chr8 (1-140)||(29617171-29617310)
chr8 (9-140)||(39657507-39657638)
chr8 (1-143)||(1236594-1236736)
chr8 (1-143)||(1239294-1239436)
chr8 (23-143)||(24099169-24099294)
chr8 (1-89)||(20559641-20559729)
chr8 (1-89)||(20571203-20571291)
chr8 (1-89)||(43833893-43833981)
chr8 (1-140)||(14585730-14585869)
chr8 (20-138)||(8443427-8443545)
chr8 (8-88)||(18846370-18846450)
chr8 (1-89)||(23230747-23230835)
chr8 (1-89)||(37971387-37971475)
chr8 (1-140)||(5333482-5333621)
chr8 (9-84)||(7883146-7883221)
chr8 (1-103)||(10377779-10377881)
chr8 (1-51)||(28086709-28086759)
chr8 (9-89)||(3673545-3673625)
chr8 (1-41)||(31013505-31013545)
chr8 (1-124)||(16928654-16928777)
chr8 (1-140)||(33347418-33347557)
chr8 (1-140)||(45445708-45445847)
chr8 (1-67)||(5046879-5046945)
chr8 (1-103)||(27110362-27110464)
chr8 (1-103)||(40211199-40211301)
chr8 (1-102)||(9637306-9637407)
chr8 (1-50)||(29939443-29939492)
chr8 (2-46)||(14913235-14913279)
chr8 (4-46)||(25238493-25238535)
chr8 (1-67)||(34493128-34493194)
chr8 (13-62)||(26469055-26469104)
chr8 (1-50)||(30568218-30568267)
chr8 (1-46)||(40618970-40619015)
chr8 (206-267)||(42756668-42756729)
chr8 (1-124)||(17693510-17693634)
[»] chr4 (53 HSPs)
chr4 (1-89)||(21686141-21686229)
chr4 (1-143)||(52944379-52944521)
chr4 (1-140)||(27652015-27652153)
chr4 (1-140)||(31891186-31891325)
chr4 (1-140)||(36194780-36194918)
chr4 (1-124)||(47320311-47320434)
chr4 (1-89)||(2520901-2520989)
chr4 (8-84)||(10258802-10258878)
chr4 (8-90)||(29960855-29960937)
chr4 (1-89)||(22611305-22611393)
chr4 (1-83)||(29120278-29120360)
chr4 (1-103)||(45418620-45418722)
chr4 (1-89)||(19853411-19853499)
chr4 (1-89)||(36204278-36204366)
chr4 (1-65)||(52933848-52933912)
chr4 (1-89)||(53811150-53811238)
chr4 (1-140)||(21662508-21662647)
chr4 (1-140)||(21671272-21671411)
chr4 (1-63)||(6155122-6155184)
chr4 (1-67)||(36161855-36161921)
chr4 (1-63)||(37465630-37465692)
chr4 (1-62)||(18935931-18935992)
chr4 (19-143)||(22038719-22038843)
chr4 (1-89)||(43510318-43510406)
chr4 (1-140)||(10496406-10496545)
chr4 (1-68)||(22305520-22305587)
chr4 (2-89)||(26633571-26633658)
chr4 (1-84)||(56040545-56040628)
chr4 (208-290)||(51682012-51682094)
chr4 (1-67)||(51888110-51888176)
chr4 (1-103)||(54021968-54022069)
chr4 (1-50)||(9714071-9714120)
chr4 (1-41)||(9178523-9178563)
chr4 (1-89)||(32766636-32766724)
chr4 (1-41)||(48257531-48257571)
chr4 (8-52)||(55228137-55228181)
chr4 (1-52)||(7008888-7008939)
chr4 (1-52)||(42032428-42032479)
chr4 (1-52)||(43853602-43853653)
chr4 (1-140)||(53444189-53444328)
chr4 (1-143)||(2069480-2069621)
chr4 (37-143)||(9643456-9643562)
chr4 (12-50)||(24098977-24099015)
chr4 (208-290)||(51682394-51682475)
chr4 (2-143)||(12199593-12199734)
chr4 (1-50)||(35348468-35348517)
chr4 (9-41)||(4142659-4142691)
chr4 (1-41)||(11299909-11299949)
chr4 (1-89)||(13634237-13634325)
chr4 (1-89)||(17949223-17949311)
chr4 (1-89)||(17953075-17953163)
chr4 (1-41)||(22806706-22806746)
chr4 (21-89)||(33921176-33921244)
[»] chr5 (32 HSPs)
chr5 (1-140)||(28540805-28540944)
chr5 (1-143)||(8088111-8088253)
chr5 (1-140)||(14211277-14211416)
chr5 (1-140)||(2979205-2979344)
chr5 (9-124)||(7930243-7930358)
chr5 (1-128)||(19103366-19103493)
chr5 (2-139)||(39567321-39567458)
chr5 (1-89)||(24229683-24229771)
chr5 (13-140)||(14726372-14726499)
chr5 (1-89)||(13007330-13007418)
chr5 (1-125)||(35920895-35921019)
chr5 (1-89)||(38597898-38597986)
chr5 (1-140)||(31391652-31391791)
chr5 (1-103)||(1409585-1409687)
chr5 (1-50)||(10722901-10722950)
chr5 (206-275)||(34607113-34607182)
chr5 (1-89)||(9113624-9113712)
chr5 (1-41)||(26825579-26825619)
chr5 (1-120)||(14082295-14082414)
chr5 (9-83)||(26878015-26878089)
chr5 (1-50)||(11976834-11976883)
chr5 (1-50)||(41630642-41630691)
chr5 (1-41)||(25980306-25980346)
chr5 (1-89)||(34945494-34945582)
chr5 (1-52)||(8096397-8096448)
chr5 (1-124)||(13421999-13422122)
chr5 (1-140)||(35850849-35850988)
chr5 (1-55)||(11867784-11867838)
chr5 (208-290)||(36258279-36258361)
chr5 (1-45)||(6012037-6012081)
chr5 (1-84)||(10332446-10332530)
chr5 (1-37)||(11192532-11192568)
[»] chr2 (49 HSPs)
chr2 (1-143)||(32448516-32448661)
chr2 (1-143)||(17249047-17249189)
chr2 (1-140)||(10237116-10237255)
chr2 (1-143)||(10929723-10929865)
chr2 (1-143)||(29574528-29574670)
chr2 (17-143)||(12647028-12647151)
chr2 (1-103)||(29279470-29279572)
chr2 (1-143)||(37416768-37416910)
chr2 (1-138)||(41694684-41694821)
chr2 (1-89)||(1421788-1421876)
chr2 (1-89)||(4778865-4778953)
chr2 (1-101)||(4904045-4904145)
chr2 (1-89)||(7646590-7646678)
chr2 (1-140)||(3309006-3309145)
chr2 (1-84)||(37994401-37994484)
chr2 (1-50)||(25508968-25509017)
chr2 (1-89)||(33585635-33585723)
chr2 (2-73)||(19595804-19595875)
chr2 (1-140)||(23933519-23933658)
chr2 (1-124)||(37876506-37876629)
chr2 (1-140)||(30399929-30400074)
chr2 (1-41)||(4100496-4100536)
chr2 (1-41)||(9169158-9169198)
chr2 (13-89)||(31128692-31128768)
chr2 (1-89)||(31788568-31788656)
chr2 (1-61)||(36692014-36692074)
chr2 (1-41)||(38445326-38445366)
chr2 (1-103)||(7677773-7677875)
chr2 (9-103)||(11985141-11985235)
chr2 (1-143)||(12554081-12554223)
chr2 (1-62)||(6358781-6358842)
chr2 (9-62)||(14423464-14423517)
chr2 (1-50)||(18763619-18763668)
chr2 (1-57)||(19597984-19598039)
chr2 (1-52)||(14955678-14955729)
chr2 (7-46)||(17994636-17994675)
chr2 (1-140)||(19028814-19028953)
chr2 (1-52)||(28533854-28533905)
chr2 (15-62)||(31210521-31210568)
chr2 (3-46)||(33140582-33140625)
chr2 (1-64)||(42577245-42577308)
chr2 (1-103)||(5427769-5427871)
chr2 (1-50)||(18107650-18107699)
chr2 (1-50)||(43397018-43397067)
chr2 (9-41)||(4264632-4264664)
chr2 (1-33)||(19062247-19062279)
chr2 (9-41)||(27097315-27097347)
chr2 (1-41)||(33760093-33760133)
chr2 (1-41)||(41327899-41327939)
[»] scaffold0347 (1 HSPs)
scaffold0347 (18-126)||(6095-6203)
[»] scaffold0888 (1 HSPs)
scaffold0888 (1-140)||(1577-1716)
[»] scaffold0127 (1 HSPs)
scaffold0127 (1-83)||(15600-15682)
[»] scaffold0884 (1 HSPs)
scaffold0884 (1-62)||(1872-1933)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1-89)||(50878-50966)
[»] scaffold0121 (1 HSPs)
scaffold0121 (12-99)||(31184-31271)
[»] scaffold0050 (1 HSPs)
scaffold0050 (1-124)||(65941-66064)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-103)||(71199-71301)
[»] scaffold0445 (1 HSPs)
scaffold0445 (1-61)||(1474-1534)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-41)||(71769-71809)
[»] scaffold0017 (1 HSPs)
scaffold0017 (9-89)||(32654-32734)
[»] scaffold0262 (1 HSPs)
scaffold0262 (8-103)||(1725-1820)
[»] scaffold0064 (1 HSPs)
scaffold0064 (9-52)||(18989-19032)
[»] scaffold0021 (1 HSPs)
scaffold0021 (18-89)||(4274-4345)
[»] scaffold0634 (1 HSPs)
scaffold0634 (1-103)||(8600-8702)
[»] scaffold0603 (1 HSPs)
scaffold0603 (1-41)||(7865-7905)
[»] scaffold0039 (1 HSPs)
scaffold0039 (1-89)||(93209-93297)


Alignment Details
Target: chr3 (Bit Score: 171; Significance: 1e-91; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 9173937 - 9173751
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9173937 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 9173838  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaatatgacataatcgattgttattggatgtgttaaaacagcgtgttagtgg 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||| |||||||||||||    
T  9173837 ttgtgtggatctgtgattgactgaagctggtctttcaatatgacatggtggattgttattggatgtgttaaaagagcgtgttagtgg 9173751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 392 - 479
Target Start/End: Original strand, 9172435 - 9172525
Alignment:
Q  392 ccctccaccggcgactctcatttccggccgtcctcttgccatctc---cttctcatttccggttaaaggtgtgtcaagaccctgtttcttt 479  Q
    |||||||||||||||||||||||||||||||||||||||||||||   |||||||||||| |||||||||||||| |||||||||||||||    
T  9172435 ccctccaccggcgactctcatttccggccgtcctcttgccatctccttcttctcatttcctgttaaaggtgtgtctagaccctgtttcttt 9172525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 21289713 - 21289852
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||| |||| ||||| ||| ||||  | |||||||| |||| ||  ||||||    
T  21289713 ttaatagcatacaacggcaaaatgcctacaaataatatgatgaaatctaaattaccagaatatccatgcttctagatctgcaacgttgacaccaaaatca 21289812  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || || |||||||| ||||||||| ||||||||||    
T  21289813 ttgattgaatttgtgattgtctgaagctgatctttcaata 21289852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 9 - 143
Target Start/End: Original strand, 628830 - 628964
Alignment:
Q  9 atacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatcattgtgtgg 108  Q
    |||||||||||||||||||||||||||||||||  ||||||||| |||| |||| || | |||| || ||| |||| |||||   ||||||||||  ||     
T  628830 atacaacggcaaaatgcctacaaataatatgatataatctaaatcaccagaatactcttgcttctggatctacaacgttgatgtccaaatcattgattga 628929  T
Q  109 atctgtgattgactgaagctggtctttcaatatga 143  Q
    ||||||||||||||||||||| |||||||||||||    
T  628930 atctgtgattgactgaagctgatctttcaatatga 628964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 50194234 - 50194376
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||| |||||||||||||||||||| |||||||| | |||||||| |||| |||| |||| ||||||| |||||||| || |    |||||||    
T  50194234 ttaatagcatataacggcaaaatgcctacaaaaaatatgatgatatctaaatcaccagaatactcatgcttccggatctgcaacgttaacgtccaaatca 50194333  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaatatga 143  Q
    | |  || |||||||||||||||||||||||||||||||||||    
T  50194334 tcgattgaatctgtgattgactgaagctggtctttcaatatga 50194376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 8914901 - 8914762
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||| |||| ||||  ||| |||| || |||||||| ||||  | |||||||    
T  8914901 ttaatagcatacaacggcaaaatgcctacaaataatatgatgaaatctaaatcaccagaatacacattcttctggatctgcaacgttgacgcccaaatca 8914802  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || || |||||||| ||||||||  ||||||||||    
T  8914801 ttgattgaatttgtgattgtctgaagctaatctttcaata 8914762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 51303542 - 51303681
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||| |||| ||||  ||| |||| || |||||||| ||||  | |||||||    
T  51303542 ttaatagcatacaacggcaaaatgcctacaaataatatgatgaaatctaaatcaccagaatacccatgcttctggatctgcaacgttgacgcccaaatca 51303641  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || || |||||||| | ||||||| ||||||||||    
T  51303642 ttgattgaatttgtgattgtcagaagctgatctttcaata 51303681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 53807757 - 53807899
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||||||||||||||||||||||||||||  ||||||||| |||| |||| || | |||| || | |||||| ||||    |||||||    
T  53807757 ttaatagcatacaacggcaaaatgcctacaaataatatgatataatctaaatcaccagaatactcttgcttctggatatgcaacgttgacgtccaaatca 53807856  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaatatga 143  Q
    |||  || |||||||||||||||||| || |||||||||||||    
T  53807857 ttgattgaatctgtgattgactgaagttgatctttcaatatga 53807899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 51923916 - 51923777
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||| |||| ||||  ||| |||| || |||||||| ||||    |||||||    
T  51923916 ttaatagcatacaacggcaaaatgcctacaaataatatgatgaaatctaaatcaccagaatacccatgcttctggatctgcaacgttgacgtccaaatca 51923817  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || || || ||||| ||||||||| ||||||||||    
T  51923816 ttgattgaatttgcgattgtctgaagctgatctttcaata 51923777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 207 - 292
Target Start/End: Complemental strand, 9173709 - 9173624
Alignment:
Q  207 atgagaatggtgagaatgaattacaatcataagattaaaataaagggataggatgaaaacatcacttaagttagtcatgtgccatt 292  Q
    |||||||||||||||||||||||||  ||| | |||||||||||||||   ||| |||||||||||||||||||||||||||||||    
T  9173709 atgagaatggtgagaatgaattacatccatcaaattaaaataaagggacgagattaaaacatcacttaagttagtcatgtgccatt 9173624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 7546804 - 7546665
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||| |||| ||||  ||| |||  || || ||||| ||||  | |||||||    
T  7546804 ttaatagcatacaacggcaaaatgcctacaaataatatgatgaaatctaaatcaccagaatacccatgcttttggatcggcaacgttgacgctcaaatca 7546705  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || || |||||||| ||||| ||| ||||||||||    
T  7546704 ttgactgaatttgtgattgtctgaaactgatctttcaata 7546665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 14859679 - 14859537
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||| ||||||||| || ||||||| ||| |||||||||| |||||||||  ||| |||| || |||||||| ||||    |||||||    
T  14859679 ttaatagcatacaacgacaaaatgccaaccaataatacgataaaatctaaattaccaaaatacccatgcttctggatctgcaacgttgacgtccaaatca 14859580  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaatatga 143  Q
    |||  || || ||||||||| |||||||| |||||||||||||    
T  14859579 ttgattgaatatgtgattgattgaagctgatctttcaatatga 14859537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 45568344 - 45568426
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaa 83  Q
    |||||| |||||||||||||||||||||||||||||||||| ||| |||||| ||| |||||| ||| ||||||| |||||||    
T  45568344 ttaatagcatacaacggcaaaatgcctacaaataatatgataaaacctaaatcacccaaatatccatgcttccggatctgcaa 45568426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 35175593 - 35175453
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||| | ||||||||||||||| |||||||| |||| ||||| | || |||| ||||  || ||| |||||||| |||||   |||||||    
T  35175593 ttaatagcatacaatgacaaaatgcctacaaacaatatgatgaaatataaatcatcagaatactcatgttttcggatctgcaacgttgatgtccaaatca 35175494  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaatat 141  Q
    |||  || || |||||||||||||||||| |||||||||||    
T  35175493 ttgattgaatatgtgattgactgaagctgatctttcaatat 35175453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 29922246 - 29922104
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||||||||||||||||||| |||||||| |||||||||| |||| || | ||||  ||| || |||||||| ||||    |||||||    
T  29922246 ttaatagcatacaacggcaaaatgcctacaaacaatatgataaaatctaaatcaccagaacaatcatgtttctggatctgcaacgttgacgtccaaatca 29922147  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaatatga 143  Q
    |||  || || ||||||||  ||||| || |||||||||||||    
T  29922146 ttgattgaatatgtgattggttgaagttgatctttcaatatga 29922104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 29971399 - 29971257
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||||||||||||||||||| |||||||| |||||||||| |||| || | ||||  ||| || |||||||| ||||    |||||||    
T  29971399 ttaatagcatacaacggcaaaatgcctacaaacaatatgataaaatctaaatcaccagaacaatcatgtttctggatctgcaacgttgacgtccaaatca 29971300  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaatatga 143  Q
    |||  || || ||||||||  ||||| || |||||||||||||    
T  29971299 ttgattgaatatgtgattggttgaagttgatctttcaatatga 29971257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 23799809 - 23799858
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaa 50  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  23799809 ttaataacatacaacggcaaaatgcctacaaataatatgataaaatctaa 23799858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 21533708 - 21533796
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| |||||||||||||||||||||||||||||||||| ||| |||| | ||| |||||  ||| ||||||| |||||||| ||||    
T  21533708 ttaatagcatacaacggcaaaatgcctacaaataatatgataaaacctaagtcaccgaaatacccatgcttccggatctgcaacgttga 21533796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 27706125 - 27706181
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataacca 57  Q
    |||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  27706125 ttaatagcatacaacgacaaaatgcctacaaataatatgatgaaatctaaataacca 27706181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 43488489 - 43488577
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| ||||||||||||||| ||||| |||||||||||| ||| |||||| ||| ||||| |||| ||||||| |||||||| ||||    
T  43488489 ttaatagcatacaacggcaaaaagcctaaaaataatatgataaaacctaaatcaccgaaatactcatgcttccggatctgcaacgttga 43488577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 19339364 - 19339226
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||||||||||||| ||||||||||||| |||||||||| |||||||| | | | |||||  ||| |||| || ||||||||||||| ||  ||||||    
T  19339364 ttaataacatacaacgacaaaatgcctacagataatatgataaaatctaagtca-cgaaatacccatgcttctggatctgcaacattgacacctaaatca 19339266  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || || ||| ||||||| ||| || ||||||||||    
T  19339265 ttgattgaatttgtaattgactaaagttgatctttcaata 19339226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 205 - 295
Target Start/End: Original strand, 9172337 - 9172418
Alignment:
Q  205 ctatgagaatggtgagaatgaattacaatcataagattaaaataaagggataggatgaaaacatcacttaagttagtcatgtgccatttcc 295  Q
    ||||||||||||||||||||||||||| |||||         |||||||||  ||| ||||||||||||||||||||||||||||||||||    
T  9172337 ctatgagaatggtgagaatgaattacagtcata---------taaagggatgagattaaaacatcacttaagttagtcatgtgccatttcc 9172418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 12050547 - 12050649
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||||||||||||| |||||||| ||||||||||||||| ||| |||| |  || ||||| ||||  |||||| |||||||| |||| || |||||||    
T  12050547 ttaataacatacaacgacaaaatgcttacaaataatatgataaaacctaagtccccgaaatactcatgtttccggatctgcaacgttgacacccaaatca 12050646  T
Q  101 ttg 103  Q
    |||    
T  12050647 ttg 12050649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 38860011 - 38860073
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatat 63  Q
    |||||| |||||||||||||||||||||||||||||||||| ||| |||| | ||||||||||    
T  38860011 ttaatagcatacaacggcaaaatgcctacaaataatatgataaaacctaagtcaccaaaatat 38860073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 42460938 - 42460836
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||  |||||||||||||||||||||||| |||||||||| |||| ||| ||||| |||| |  |||||||| ||||  | |||||||    
T  42460938 ttaatagcatacaacaacaaaatgcctacaaataatatgataaaatctaaatcaccagaatgttcatgcttctgtatctgcaacgttgacgcccaaatca 42460839  T
Q  101 ttg 103  Q
    |||    
T  42460838 ttg 42460836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 4711671 - 4711582
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgat 90  Q
    |||||| |||||||||||||||||||||||||||||||||| |||  ||| | ||| |||||  ||| ||||||| |||||||| |||||    
T  4711671 ttaatagcatacaacggcaaaatgcctacaaataatatgataaaacttaagtcaccgaaatacccatgcttccggatctgcaacgttgat 4711582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 19619902 - 19619853
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaa 50  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  19619902 ttaatagcatacaacggcaaaatgcctacaaataatatgataaaatctaa 19619853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 21431802 - 21431714
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| |||||||||||||||||||||||||||||||||| |||  ||| | ||| |||||  ||| ||||||| |||||||| ||||    
T  21431802 ttaatatcatacaacggcaaaatgcctacaaataatatgataaaacttaagtcaccgaaatacccatgcttccggatctgcaacgttga 21431714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 12946866 - 12946937
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttc 72  Q
    |||||| |||| || ||||||||||||||||| |||||||| |||||||||| |||| |||| |||||||||    
T  12946866 ttaatagcatataagggcaaaatgcctacaaaaaatatgatgaaatctaaatcaccagaatactcatacttc 12946937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 16235615 - 16235476
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||| |||||||||||||| ||||||||| |||||||||| |||| ||||  ||| ||||  | |||||||| ||||  | |||||||    
T  16235615 ttaatagcatacaacgacaaaatgcctacaagtaatatgatgaaatctaaatcaccagaatacccatgcttcttgatctgcaacgttgacgcccaaatca 16235516  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || || |||||||| || || ||  ||||||||||    
T  16235515 ttgattgaatttgtgattgtctaaaactaatctttcaata 16235476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 33580069 - 33579922
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||| ||||||||||||||||||||||||||||| ||| |||||| ||| ||||   | | ||||||| ||| |||| ||||  | |||||||    
T  33580069 ttaatagcataaaacggcaaaatgcctacaaataatatgataaaacctaaatcaccgaaattcacgtgcttccggatcttcaacgttgacgcccaaatca 33579970  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaatatgacataa 148  Q
    |||  || || ||| ||||||||| |  | ||||||||||||| ||||    
T  33579969 ttggttgaatttgtaattgactgatgtcgatctttcaatatgaaataa 33579922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 20987654 - 20987708
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataac 55  Q
    |||||| |||||||| ||||||||||||||||||||||||| |||||||| ||||    
T  20987654 ttaatagcatacaactgcaaaatgcctacaaataatatgataaaatctaagtaac 20987708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 21313225 - 21313159
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcat 67  Q
    |||||| ||||||||||||||||| |||||||||||||||| |||||||| | ||| ||||| ||||    
T  21313225 ttaatagcatacaacggcaaaatggctacaaataatatgataaaatctaagtcaccgaaatactcat 21313159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 27856354 - 27856292
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatat 63  Q
    |||||| ||| |||||| ||||||||||||||||||||||| |||||||||| |||| |||||    
T  27856354 ttaatagcatgcaacggaaaaatgcctacaaataatatgataaaatctaaatcaccagaatat 27856292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 40487514 - 40487432
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaa 83  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||| |||| | ||| |||||   || ||||||| |||||||    
T  40487514 ttaataacatataacggcaaaatgcctacaaataatatgataaaacctaagtcaccgaaatacctatgcttccggatctgcaa 40487432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 54149180 - 54149078
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||| || ||||||||||||||||||||| ||||| || | ||| |||||  ||| ||||||| |||||||| ||||  | |||||||    
T  54149180 ttaatagcatacaacgacataatgcctacaaataatatgataaaatccaagtcaccgaaatagccatgcttccggatctgcaacgttgacgcccaaatca 54149081  T
Q  101 ttg 103  Q
    |||    
T  54149080 ttg 54149078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 6954595 - 6954683
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| ||||||||||||||||||||||||||||| |||| |||  ||| | ||| |||||  ||| ||||||| |||||| ||||||    
T  6954595 ttaatagcatacaacggcaaaatgcctacaaataatttgataaaacataagtcaccgaaatacccatgcttccggatctgcagcattga 6954683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 9998656 - 9998616
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgat 41  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  9998656 ttaatagcatacaacggcaaaatgcctacaaataatatgat 9998616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 10108425 - 10108385
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgat 41  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  10108425 ttaatagcatacaacggcaaaatgcctacaaataatatgat 10108385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 10229665 - 10229625
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgat 41  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  10229665 ttaatagcatacaacggcaaaatgcctacaaataatatgat 10229625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 10233259 - 10233219
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgat 41  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  10233259 ttaatagcatacaacggcaaaatgcctacaaataatatgat 10233219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 43017077 - 43017037
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgat 41  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  43017077 ttaatagcatacaacggcaaaatgcctacaaataatatgat 43017037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 46220845 - 46220801
Alignment:
Q  8 catacaacggcaaaatgcctacaaataatatgatcaaatctaaat 52  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||    
T  46220845 catacaacggtaaaatgcctacaaataatatgataaaatctaaat 46220801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 48650633 - 48650673
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgat 41  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  48650633 ttaatagcatacaacggcaaaatgcctacaaataatatgat 48650673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 52923016 - 52923104
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| |||||||||| ||||||||||||||||||||||| |||  ||| | ||| |||||  ||| ||||||| |||||||| ||||    
T  52923016 ttaatagcatacaacggtaaaatgcctacaaataatatgataaaacttaagtcaccgaaatacccatgcttccggatctgcaacgttga 52923104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 3085200 - 3085251
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaat 52  Q
    |||||| | |||||||||||||||||||||||||||||||| || |||||||    
T  3085200 ttaatagcctacaacggcaaaatgcctacaaataatatgatgaattctaaat 3085251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 7792086 - 7792137
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaat 52  Q
    |||||| | ||||| |||||||||||||||||||||||||| ||||||||||    
T  7792086 ttaatagcttacaatggcaaaatgcctacaaataatatgataaaatctaaat 7792137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 9797433 - 9797516
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaac 84  Q
    |||||| ||||||||| |||||||||||||||||||||||| |||  ||||| ||  |||||  ||| ||||||| ||||||||    
T  9797433 ttaatagcatacaacgacaaaatgcctacaaataatatgataaaacataaatcacttaaatacccatgcttccggatctgcaac 9797516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 26739256 - 26739307
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaat 52  Q
    |||||| ||||||||| |||||||| ||||||||||||||| ||||||||||    
T  26739256 ttaatagcatacaacgccaaaatgcttacaaataatatgataaaatctaaat 26739307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 40556884 - 40556817
Alignment:
Q  8 catacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgg 75  Q
    |||||||||||||||||||||||||||||||||| |||  ||| | |||||||||  ||| |||||||    
T  40556884 catacaacggcaaaatgcctacaaataatatgataaaacttaagtcaccaaaatacacatgcttccgg 40556817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 46304419 - 46304501
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaa 83  Q
    |||||| ||||||||||||| ||||||||| |||||||||| ||| |||| | ||| |||||  ||| ||||||| |||||||    
T  46304419 ttaatagcatacaacggcaacatgcctacatataatatgataaaacctaagtcaccgaaatacccatgcttccggatctgcaa 46304501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 38545988 - 38545939
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaa 50  Q
    |||||| |||| ||||||||||||||||||||||||||||| ||| ||||    
T  38545988 ttaatagcataaaacggcaaaatgcctacaaataatatgataaaacctaa 38545939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 44805218 - 44805157
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaata 62  Q
    |||||| ||||||| | ||||||||||||||| |||||||| |||||||||| |||| ||||    
T  44805218 ttaatagcatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataata 44805157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 7448813 - 7448901
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| |||||| |||||||||| |||||||||||||||| |||  ||| | ||| ||||| |||| ||||||| | |||||| ||||    
T  7448813 ttaatagcatacagcggcaaaatgtctacaaataatatgatgaaacttaagtcaccgaaatactcatgcttccggatatgcaacgttga 7448901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 7456955 - 7457043
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| |||||| |||||||||| |||||||||||||||| |||  ||| | ||| ||||| |||| ||||||| | |||||| ||||    
T  7456955 ttaatagcatacagcggcaaaatgtctacaaataatatgatgaaacttaagtcaccgaaatactcatgcttccggatatgcaacgttga 7457043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 44959872 - 44959912
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgat 41  Q
    |||||| ||||||| ||||||||||||||||||||||||||    
T  44959872 ttaatagcatacaatggcaaaatgcctacaaataatatgat 44959912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 53508404 - 53508364
Alignment:
Q  12 caacggcaaaatgcctacaaataatatgatcaaatctaaat 52  Q
    ||||| |||||||||||||||||||||||| ||||||||||    
T  53508404 caacgacaaaatgcctacaaataatatgataaaatctaaat 53508364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 47896340 - 47896218
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||| |||||||| ||||||||||| ||| ||| |||| | | | |||||||||| ||||||| | ||||||||| |  | |||||||    
T  47896340 ttaatagcatacaacgacaaaatgc-tacaaataataagataaaacctaagttatcgaaatattcatgcttccggatatgcaacatttacgcccaaatca 47896242  T
Q  101 ttgtgtggatctgtgattgactga 124  Q
    |||  || || ||| |||||||||    
T  47896241 ttggttgaatttgtaattgactga 47896218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 12149683 - 12149785
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||||||||||||||||||||| | ||||||||| |||  ||| | ||| |||||  ||| ||||| | |||||||| ||||  | |||||||    
T  12149683 ttaatagcatacaacggcaaaatgcctacgattaatatgataaaacataattcaccgaaatacccattcttccagatctgcaacgttgacgcccaaatca 12149782  T
Q  101 ttg 103  Q
    |||    
T  12149783 ttg 12149785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 32246596 - 32246550
Alignment:
Q  17 gcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatat 63  Q
    ||||| ||||||||||||||||||| |||||||||| |||| |||||    
T  32246596 gcaaattgcctacaaataatatgataaaatctaaatcaccagaatat 32246550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 18011202 - 18011121
Alignment:
Q  8 catacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||||| |||| || ||||||||||||||||| | |||||| | ||  |||||||||| |||| || |||||||| ||||    
T  18011202 catacaaccgcaagatacctacaaataatatgattatatctaagtcactgaaatattcatgcttctggatctgcaacgttga 18011121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 26275718 - 26275763
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaat 46  Q
    |||||| ||||||| | |||||||||||||||||||||||| ||||    
T  26275718 ttaatagcatacaatgacaaaatgcctacaaataatatgataaaat 26275763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 51487267 - 51487218
Alignment:
Q  18 caaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcat 67  Q
    ||||||| |||||||||||||||| |||||||||| |||| |||| ||||    
T  51487267 caaaatgtctacaaataatatgataaaatctaaatcaccagaatactcat 51487218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 53099978 - 53099930
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaa 50  Q
    |||||||||||||||| ||||||| |||||||||||||| | ||||||||    
T  53099978 ttaataacatacaacgacaaaatg-ctacaaataatatgctaaaatctaa 53099930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 6e-32; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 24583143 - 24583001
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||||||||||||||||||||||||||||  ||||||||| |||| ||||||| | |||| || |||||||| ||||    |||||||    
T  24583143 ttaatatcatacaacggcaaaatgcctacaaataatatgatataatctaaatcaccagaatattcttgcttctggatctgcaacgttgacgtccaaatca 24583044  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaatatga 143  Q
    |||  || ||||||||||||||||||||| |||||||||||||    
T  24583043 ttgattgaatctgtgattgactgaagctgatctttcaatatga 24583001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 8 - 143
Target Start/End: Complemental strand, 44915825 - 44915690
Alignment:
Q  8 catacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatcattgtgtg 107  Q
    |||||||||||||||||||||||||||||||||| ||||||||  |||| ||||| |||| ||||||| |||||||||||||  | ||||||||||  ||    
T  44915825 catacaacggcaaaatgcctacaaataatatgataaaatctaagaaaccgaaatactcatgcttccggatctgcaacattgacgcccaaatcattgattg 44915726  T
Q  108 gatctgtgattgactgaagctggtctttcaatatga 143  Q
     || ||| ||||||||| | || |||||||||||||    
T  44915725 aatttgtaattgactgatgttgatctttcaatatga 44915690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 47133096 - 47132954
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||| |||||||||||||||||||| |||||||| |||||||||| |||| |||| |||| ||||||| |||||||  ||||    |||||||    
T  47133096 ttaatagcatataacggcaaaatgcctacaaaaaatatgatgaaatctaaatcaccagaatactcatgcttccggatctgcaatgttgacgtccaaatca 47132997  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaatatga 143  Q
    | |  || ||||||||||||||||||||| |||||||||||||    
T  47132996 tcgattgaatctgtgattgactgaagctgatctttcaatatga 47132954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 19061102 - 19060960
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||||||||||||||||||||||||||||  ||||||||| |||| |||| || | |||| || ||| ||||||||||   ||||| |    
T  19061102 ttaatagcatacaacggcaaaatgcctacaaataatatgatataatctaaatcaccagaatactcttccttctggatctacaacattgatgtccaaatta 19061003  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaatatga 143  Q
    |||  || | ||||||||||||||||||  |||||||||||||    
T  19061002 ttgattgaacctgtgattgactgaagctaatctttcaatatga 19060960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 48750378 - 48750239
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||| |||| ||||  ||| |||  || |||||||| ||||  | |||||||    
T  48750378 ttaatagcatacaacggcaaaatgcctacaaataatatgatgaaatctaaatcaccagaatacccatgcttatggatctgcaacgttgacgcccaaatca 48750279  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  |  || |||||||| ||||||||| ||||||||||    
T  48750278 ttgattaaatttgtgattgtctgaagctgatctttcaata 48750239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 16263054 - 16262912
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||| ||||||||||||| ||| ||||| ||||| |||||||||| | || |||| |||| ||||||| |||||||| ||||| |||||||||    
T  16263054 ttaatagcataaaacggcaaaatgcatacgaataacatgataaaatctaaatcatcagaatactcatgcttccggatctgcaacgttgatgcacaaatca 16262955  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaatatga 143  Q
    |||  || || |||||||||||| || || | |||||||||||    
T  16262954 ttgattgaatatgtgattgactgcagttgatttttcaatatga 16262912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 44543465 - 44543323
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||| |||||||||||||||||||||||||||||  ||||||||| || | |||| || | |||| || |||||||| ||||    |||||||    
T  44543465 ttaatagcataaaacggcaaaatgcctacaaataatatgatataatctaaatcactagaatactcttgcttctggatctgcaacgttgacgtccaaatca 44543366  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaatatga 143  Q
    |||  || |||||||||||||| |||||| |||||||||||||    
T  44543365 ttgattgaatctgtgattgactaaagctgatctttcaatatga 44543323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 14872832 - 14872709
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||||||||||||||||||||||||||||||||| ||| |||| | |||||||||  ||| ||||||| |||||||| ||||  | |||||||    
T  14872832 ttaatagcatacaacggcaaaatgcctacaaataatatgataaaacctaagtcaccaaaatacccatgcttccggatctgcaacgttgacgcccaaatca 14872733  T
Q  101 ttgtgtggatctgtgattgactga 124  Q
    |||  || || ||| |||||||||    
T  14872732 ttggttgaatttgtaattgactga 14872709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 4413307 - 4413219
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| |||||||| ||||||||||||||||||||||||| ||| |||| | ||| |||||||||| ||||||| |||||||| ||||    
T  4413307 ttaatagcatacaacagcaaaatgcctacaaataatatgataaaacctaagtcaccgaaatattcatgcttccggatctgcaacgttga 4413219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 21947517 - 21947605
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||  ||| | ||| |||||||||| ||||||| |||||||| ||||    
T  21947517 ttaataaaatacaacggcaaaatgcctacaaataatatgataaaacttaagtcaccgaaatattcatgcttccggatctgcaacgttga 21947605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 36775609 - 36775748
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||| |||   |||  |||  ||| || |||||||| ||||  | |||||||    
T  36775609 ttaatagcatacaacggcaaaatgcctacaaataatatgatgaaatctaaatcaccgggatacccatgtttctggatctgcaacgttgacgcccaaatca 36775708  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || || |||||||| ||||||| | ||||||||||    
T  36775709 ttgattgaatttgtgattgtctgaagccgatctttcaata 36775748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 206 - 288
Target Start/End: Original strand, 29406831 - 29406913
Alignment:
Q  206 tatgagaatggtgagaatgaattacaatcataagattaaaataaagggataggatgaaaacatcacttaagttagtcatgtgc 288  Q
    |||||||||| |||||||||||||||  ||| ||||||||||||||||||  ||| |||||||||||||| | ||||||||||    
T  29406831 tatgagaatgatgagaatgaattacagccatcagattaaaataaagggatgagattaaaacatcacttaaatgagtcatgtgc 29406913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 49627106 - 49626964
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||||||||||| |||||||||| |||||  ||||||||| | || |||| || | |||| |  |||||||| ||||    |||||||    
T  49627106 ttaatagcatacaacggcaaaatgtctacaaataagatgatataatctaaatcatcagaatactcttgcttctgcatctgcaacgttgacgtccaaatca 49627007  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaatatga 143  Q
    |||  || || |||||||||||||||||| |||||||||||||    
T  49627006 ttgattgaatttgtgattgactgaagctgatctttcaatatga 49626964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 34412991 - 34413052
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaata 62  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||| ||||    
T  34412991 ttaataacatacaaccgcaaaatgcctacaaataatatgatgaaatctaaatcaccagaata 34413052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 24583339 - 24583275
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattc 65  Q
    |||||| ||||||||||||||||||||||||||||||||||  ||||||||| |||| |||||||    
T  24583339 ttaatagcatacaacggcaaaatgcctacaaataatatgatataatctaaatcaccagaatattc 24583275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 3228462 - 3228339
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||| |||||| | | |||||| |||  || ||| |||||||| ||||  | |||||||    
T  3228462 ttaataacatataacggcaaaatgcctacaaataatatgataaaacctaaatcatcgaaatatccatgatttcggatctgcaacgttgacgcccaaatca 3228363  T
Q  101 ttgtgtggatctgtgattgactga 124  Q
    |||  || || ||| |||||||||    
T  3228362 ttgattgtatttgtaattgactga 3228339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 15492480 - 15492378
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||||||||| ||||||| ||||||||||||||| |||||||||| |||| ||||| ||| || | || ||||||||| |||  | |||||||    
T  15492480 ttaatagcatacaacggtaaaatgcatacaaataatatgataaaatctaaatcaccataatatccatgctccaggatctgcaacactgacgcccaaatca 15492381  T
Q  101 ttg 103  Q
    |||    
T  15492380 ttg 15492378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 37720066 - 37720187
Alignment:
Q  19 aaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatcattgtgtggatctgtgatt 118  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||  ||| |||  || |||||||| ||||  | |||||||||   || || |||||||    
T  37720066 aaaatgcctacaaataatatgataaaatctaaataaccagaatacccatgcttttggatctgcaacgttgacgcccaaatcattaaatgaatttgtgatt 37720165  T
Q  119 gactgaagctggtctttcaata 140  Q
    | |||||| || ||||||||||    
T  37720166 gtctgaagttgatctttcaata 37720187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 31317911 - 31317827
Alignment:
Q  19 aaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatcattg 103  Q
    ||||||||||||||||||||||| || ||||||| ||| |||||| ||| |||||||||||| ||| ||||  | ||||||||||    
T  31317911 aaaatgcctacaaataatatgataaattctaaatcaccgaaatatccatgcttccgggtctgtaacgttgacgcccaaatcattg 31317827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 32679047 - 32679114
Alignment:
Q  8 catacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgg 75  Q
    |||| |||||||||||||||||||| |||||||| |||||||||| |||| |||| |||| |||||||    
T  32679047 catataacggcaaaatgcctacaaaaaatatgatgaaatctaaatcaccataatactcatgcttccgg 32679114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 14489465 - 14489404
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaata 62  Q
    |||||||||||||||  |||||| ||||||||||||||||| |||||||||| |||| ||||    
T  14489465 ttaataacatacaacaacaaaatacctacaaataatatgataaaatctaaatcaccagaata 14489404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 25564191 - 25564066
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||||||||||||  ||||||  ||||||| ||||| || |||| ||||| |||| |||| |||| ||||| | |||||||  ||||  | |||||||    
T  25564191 ttaataacatacaacaacaaaatatctacaaacaatataataaaatataaatcaccagaataatcatgcttccagatctgcaatgttgacgcccaaatca 25564092  T
Q  101 ttgtgtggatctgtgattgactgaag 126  Q
    |||  || ||||||||||||||||||    
T  25564091 ttgattgaatctgtgattgactgaag 25564066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 7337562 - 7337650
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| ||| |||| ||||||||||||||||||||||||| ||| | |||| ||| |||||  ||| ||||||| |||||||| ||||    
T  7337562 ttaatagcatgcaacagcaaaatgcctacaaataatatgataaaaccaaaatcaccgaaatacccatgcttccggatctgcaacgttga 7337650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 35484290 - 35484378
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| |||||||||||||||||| ||||||||||||||| ||| | |||| ||| |||||  ||| ||| ||| |||||||| ||||    
T  35484290 ttaatagcatacaacggcaaaatgcttacaaataatatgataaaaccgaaatcaccgaaatacccatgctttcggatctgcaacgttga 35484378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 45415743 - 45415663
Alignment:
Q  9 atacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    ||||||||||||||||||||||||||||||||| ||| |||| | ||| |||||   || ||||||| |||||||| ||||    
T  45415743 atacaacggcaaaatgcctacaaataatatgataaaacctaagtcaccgaaatacctatgcttccggatctgcaacgttga 45415663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 5984029 - 5983906
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||| |||||||||||||||||||||||| |||  ||| | ||| |||||  ||| ||||||| |||||| | ||||  | |||||||    
T  5984029 ttaatagcatacaacgacaaaatgcctacaaataatatgataaaacataagtcaccgaaatacccatgcttccggatctgcagcgttgacgcccaaatca 5983930  T
Q  101 ttgtgtggatctgtgattgactga 124  Q
    |||  || || ||| |||||||||    
T  5983929 ttggttgaatttgtaattgactga 5983906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 6217722 - 6217773
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaat 52  Q
    |||||| |||||||||| ||||| ||||||||||||||||| ||||||||||    
T  6217722 ttaatagcatacaacggtaaaatacctacaaataatatgataaaatctaaat 6217773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 16162021 - 16161970
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaat 52  Q
    |||||| ||| | |||||||||||||||||||||||||||| ||||||||||    
T  16162021 ttaatagcattccacggcaaaatgcctacaaataatatgataaaatctaaat 16161970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 23291541 - 23291680
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||| ||||||||||| ||| ||||||||||||| ||| |||| | ||| ||||   ||| ||||||| ||| |||| ||||| | |||||||    
T  23291541 ttaatagcataaaacggcaaaatacctccaaataatatgataaaacctaagtcaccgaaattcacatgcttccggatcttcaacgttgatgcccaaatca 23291640  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || || ||| ||||||||| || | ||||||||||    
T  23291641 ttggttgaatttgtaattgactgatgccgatctttcaata 23291680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 7836695 - 7836744
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaa 50  Q
    |||||| |||| ||||||||||||||||||||||||||||| ||| ||||    
T  7836695 ttaatagcataaaacggcaaaatgcctacaaataatatgataaaacctaa 7836744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 16989564 - 16989515
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaa 50  Q
    |||||| |||| ||||||||||||||||||||||||||||| ||| ||||    
T  16989564 ttaatagcataaaacggcaaaatgcctacaaataatatgataaaacctaa 16989515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 34878177 - 34878226
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaa 50  Q
    |||||| |||| ||||||||||||||||||||||||||||| ||| ||||    
T  34878177 ttaatagcataaaacggcaaaatgcctacaaataatatgataaaacctaa 34878226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 19596359 - 19596399
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgat 41  Q
    |||||| |||| |||||||||||||||||||||||||||||    
T  19596359 ttaatagcataaaacggcaaaatgcctacaaataatatgat 19596399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 10776368 - 10776483
Alignment:
Q  9 atacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatcattgtgtgg 108  Q
    ||||||| ||||||||||||||||||| ||||| ||| |||| | ||| ||||| |||| |||| || |||||||  ||||    ||||||||||  |||    
T  10776368 atacaacagcaaaatgcctacaaataaaatgataaaacctaagtcaccgaaatactcatgcttctggatctgcaatgttgacgtccaaatcattgattgg 10776467  T
Q  109 atctgtgattgactga 124  Q
    || ||| |||||||||    
T  10776468 atttgtaattgactga 10776483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 31919182 - 31919079
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaa-tctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatc 99  Q
    |||||| ||||||||| ||||||| |||||||||||||||| |||  |||| | ||  |||| ||||| |||| || |||||||| ||||| | ||||||    
T  31919182 ttaatagcatacaacgacaaaatgtctacaaataatatgataaaaccctaagtcactgaaattttcatgcttctggatctgcaacgttgatgctcaaatc 31919083  T
Q  100 attg 103  Q
    ||||    
T  31919082 attg 31919079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 41740568 - 41740478
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcata--cttccgggtctgcaacattga 89  Q
    ||||||||||||||||| | ||||| || |||||||||||| |||| ||| | | ||||||||  |||  ||||||||| |||||||||||    
T  41740568 ttaataacatacaacggaagaatgcttataaataatatgataaaatataagtcatcaaaatatatatatgcttccgggtatgcaacattga 41740478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 49504494 - 49504597
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||||||||| |||||||||| ||||| |||| | ||| | |||| ||| ||| | |||| ||||||| |||||||| |||| |  |||||||    
T  49504494 ttaatagcatacaacggtaaaatgcctaaaaatattatgttaaaacccaaatcaccgaaacactcatgcttccggatctgcaacgttgacatccaaatca 49504593  T
Q  101 ttgt 104  Q
    ||||    
T  49504594 ttgt 49504597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 13144711 - 13144853
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||| || ||||||||||||||||||| |||||| |||||||| | ||  ||||| |||| ||| | | ||||||| |||||    |||||||    
T  13144711 ttaatagcataaaatggcaaaatgcctacaaatattatgataaaatctaagtcactgaaatactcatgctttcagatctgcaaaattgacgtccaaatca 13144810  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaatatga 143  Q
    |||  || || ||| ||||| | |||  |||||||||||||||    
T  13144811 ttgattgaatttgtaattgattaaagtcggtctttcaatatga 13144853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 143
Target Start/End: Original strand, 31692374 - 31692508
Alignment:
Q  9 atacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatcattgtgtgg 108  Q
    ||||| || |||||||| ||||||| ||||||| ||||  || | |||||||||| ||||||| ||| ||| ||||||||| |   |||||||||  |      
T  31692374 atacatcgacaaaatgcatacaaattatatgataaaataaaattcaccaaaatatgcatactttcggatctacaacattgacatcgaaatcattgattaa 31692473  T
Q  109 atctgtgattgactgaagctggtctttcaatatga 143  Q
    || ||| ||||||| |||||  |||||||||||||    
T  31692474 atttgttattgactaaagctaatctttcaatatga 31692508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 31984354 - 31984252
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||| |||||||| || |||||||||||| ||| |||| | ||| |||||  ||| ||||||| | |||||| ||||  | |||||||    
T  31984354 ttaatagcatacaacgacaaaatgcttaaaaataatatgataaaacctaagtcaccgaaatacccatgcttccggatttgcaacgttgacgcccaaatca 31984255  T
Q  101 ttg 103  Q
    |||    
T  31984254 ttg 31984252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 210 - 284
Target Start/End: Original strand, 51163823 - 51163897
Alignment:
Q  210 agaatggtgagaatgaattacaatcataagattaaaataaagggataggatgaaaacatcacttaagttagtcat 284  Q
    ||||||||||||||||||| || |||| |||||||||  ||||||||  || ||||||  | |||||||||||||    
T  51163823 agaatggtgagaatgaattgcagtcattagattaaaaataagggataaaattaaaacacaatttaagttagtcat 51163897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 51373757 - 51373819
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatat 63  Q
    |||||| ||||| ||| |||||||||||||||||||||||| |||| ||| | ||| ||||||    
T  51373757 ttaatagcatacgacgacaaaatgcctacaaataatatgataaaatataagtcaccgaaatat 51373819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 50377516 - 50377467
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaa 50  Q
    |||||||||||| |||| |||||||||||| | |||||||| ||||||||    
T  50377516 ttaataacatacgacggaaaaatgcctacagacaatatgataaaatctaa 50377467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 11462381 - 11462421
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgat 41  Q
    |||||| ||||||||| |||||| |||||||||||||||||    
T  11462381 ttaatagcatacaacgacaaaattcctacaaataatatgat 11462421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 32395191 - 32395151
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgat 41  Q
    |||||| |||||| |||||||||||||| ||||||||||||    
T  32395191 ttaatagcatacagcggcaaaatgcctataaataatatgat 32395151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 9e-28; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 22743136 - 22742997
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||||||||||||| |||||||||||||| |||||||||| |||| |||| |||| |||| || |||||||| ||||  | |||||||    
T  22743136 ttaatagcatacaacggcaaaatgccaacaaataatatgatgaaatctaaatcaccagaatactcatgcttctggatctgcaacgttgacgctcaaatca 22743037  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || || |||||||| ||||||||| ||||||||||    
T  22743036 ttgattgaatttgtgattggctgaagctgatctttcaata 22742997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 206 - 326
Target Start/End: Complemental strand, 31238951 - 31238827
Alignment:
Q  206 tatgagaatggtgagaatgaattacaatcataagattaaaataaagggataggatgaaaacatcacttaagttagtcatgtgc------catttcccatt 299  Q
    |||||||||| |||||||||||||||| ||| ||||||||||||||||||  ||| |||||||||||||||| ||||||||||      ||| | |||||    
T  31238951 tatgagaatgatgagaatgaattacaaccatcagattaaaataaagggatgagattaaaacatcacttaagtgagtcatgtgctattgtcatgtgccatt 31238852  T
Q  300 caactttctctcgctccccccacaatc 326  Q
    |||||||||||  ||||||||||||||    
T  31238851 caactttctct--ctccccccacaatc 31238827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 24069293 - 24069435
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||||||||  ||||||||||||||||||||||| |||||||||| |||| |||  |||| |||||||||||||||| ||||    |||||||    
T  24069293 ttaatagcatacaacgataaaatgcctacaaataatatgataaaatctaaatcaccagaatcctcatgcttccgggtctgcaacgttgacgttcaaatca 24069392  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaatatga 143  Q
    |||  || | ||||||||||  ||||||| | |||||||||||    
T  24069393 ttgattgaacctgtgattgatcgaagctgatatttcaatatga 24069435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 28476418 - 28476280
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    ||||||||||   |||||||||||||||||||||||||||| |||||||||| |||  ||||  |||||||| || |||||||| ||||  | |||||||    
T  28476418 ttaataacattgcacggcaaaatgcctacaaataatatgataaaatctaaatcacc-gaatacccatacttctggatctgcaacgttgacgcccaaatca 28476320  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || || |||||||| ||||||||| ||||||||||    
T  28476319 ttgaatgaatttgtgattgtctgaagctgatctttcaata 28476280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 35133139 - 35133000
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||||||||||||||| |||||||||||| |||||||||| || | |||| |||| |||  || |||||||| ||||  | |||||||    
T  35133139 ttaatagcatacaacggcaaaatgcctagaaataatatgatgaaatctaaatcactagaatactcatgcttttggatctgcaacgttgacgcccaaatca 35133040  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || || |||||||| |||||| || ||||||||||    
T  35133039 ttgattgaatttgtgattgtctgaagttgatctttcaata 35133000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 38880477 - 38880616
Alignment:
Q  2 taataacatacaacggcaaaatgcctacaaataa-tatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    ||||||| ||||||| ||||||| ||||| |||| |||||| ||||||||||||| ||||||  ||| ||||| | |||||||| |||  || |||||||    
T  38880477 taataacttacaacgacaaaatgtctacagataagtatgataaaatctaaataactaaaatacgcatgcttccagatctgcaacgttggcacccaaatca 38880576  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || || |||||||||||||||||| ||||||||||    
T  38880577 ttgattgaatttgtgattgactgaagctgatctttcaata 38880616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 9450036 - 9450124
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| |||||||||||||||||||||||||||||||||| ||| |||||| || ||||||  ||| ||||||| |||||||| ||||    
T  9450036 ttaatagcatacaacggcaaaatgcctacaaataatatgataaaacctaaatcactaaaatacccatgcttccggatctgcaacgttga 9450124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 35665034 - 35665176
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||| ||||||||| | |||||||||||| |||||||||| || ||||||  ||| |||  ||||||||||||||||    |||||||    
T  35665034 ttaatagcatacaacgacaaaatgccaaaaaataatatgataaaatctaaatcactaaaatacacatgcttatgggtctgcaacattgacgttcaaatca 35665133  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaatatga 143  Q
    |||  || |||| |||| |||||||| || |||||| ||||||    
T  35665134 ttgattgaatctctgatcgactgaagttgatctttcgatatga 35665176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 46700227 - 46700125
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||| |||||||||||||||| |||||||||||| |||||||| | ||| |||||| ||| ||||||| ||||||||  |||| | |||||||    
T  46700227 ttaatagcatataacggcaaaatgcctataaataatatgataaaatctaagtcaccgaaatatccatgcttccggatctgcaacgctgatgcccaaatca 46700128  T
Q  101 ttg 103  Q
    |||    
T  46700127 ttg 46700125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 12141207 - 12141295
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| |||||||||||||||||| ||||||||||||||| |||||||| | ||| |||||  ||| ||||||| |||||||| ||||    
T  12141207 ttaatagcatacaacggcaaaatgcatacaaataatatgataaaatctaagtcaccgaaatacccatgcttccggatctgcaacgttga 12141295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 39171489 - 39171577
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| |||||||||||||||||||||||||||||||||| ||| |||| | ||| |||||  ||| ||||||| |||||||| ||||    
T  39171489 ttaatagcatacaacggcaaaatgcctacaaataatatgataaaacctaagtcaccgaaatacccatgcttccggatctgcaacgttga 39171577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 48061614 - 48061526
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| |||||||||||||||||||||||||||||||||| ||| |||||| ||| ||||| |||| |||  || |||||||| ||||    
T  48061614 ttaatagcatacaacggcaaaatgcctacaaataatatgataaaacctaaatcaccgaaatactcatgcttaaggatctgcaacgttga 48061526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 12 - 103
Target Start/End: Original strand, 19404667 - 19404758
Alignment:
Q  12 caacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatcattg 103  Q
    ||||||||||| |||||||||||||||||| |||||||| | ||  ||||| |||| ||||||| |||||||||||||  | ||||||||||    
T  19404667 caacggcaaaaagcctacaaataatatgataaaatctaagtcactgaaatactcatgcttccggatctgcaacattgacgcccaaatcattg 19404758  T

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Target: chr7; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 42978802 - 42978679
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||||||||||||||||| |||||||||| ||| |||| | ||| |||||  ||| ||||||| |||||||| ||||  | |||||||    
T  42978802 ttaatagcatacaacggcaaaatgcctacatataatatgataaaacctaagtcaccgaaatacccatccttccggatctgcaacgttgacgcccaaatca 42978703  T
Q  101 ttgtgtggatctgtgattgactga 124  Q
    |||  || || ||| |||||||||    
T  42978702 ttggttgaatttgttattgactga 42978679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 41553333 - 41553475
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||||||||||||||| | || |||| ||||||| |||||||||| ||||||||||  ||  |||||| |||||||| ||||    |||||||    
T  41553333 ttaatagcatacaacggcaaaatacgtataaatgatatgataaaatctaaatcaccaaaatatctatgtttccggatctgcaacgttgacgtccaaatca 41553432  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaatatga 143  Q
    ||   || || ||||||||||||||  || |||||||||||||    
T  41553433 ttaactgaatatgtgattgactgaaattgatctttcaatatga 41553475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 48930899 - 48930797
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||||||||||||| |||||||||||||| |||||||||| |||| ||||   ||  ||| || |||||||| |||| || |||||||    
T  48930899 ttaatagcatacaacggcaaaatgccaacaaataatatgatgaaatctaaatcaccagaataccaatgtttctggatctgcaacgttgacacccaaatca 48930800  T
Q  101 ttg 103  Q
    |||    
T  48930799 ttg 48930797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 13796828 - 13796916
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| ||||||||| |||||||||||||||||||||||| |||  ||| | ||| ||||| |||| ||||||| |||||||| ||||    
T  13796828 ttaatagcatacaacgacaaaatgcctacaaataatatgataaaacttaagtcacctaaatactcatgcttccggatctgcaacgttga 13796916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 3398382 - 3398331
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaat 52  Q
    ||||||||||||||||| |||||||||| |||||||||||| ||||||||||    
T  3398382 ttaataacatacaacggtaaaatgcctaaaaataatatgataaaatctaaat 3398331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 47590503 - 47590401
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| | |||||||||||||||||||||||||||||||| ||| |||| |  || ||||| |||| ||||||| | |||||| ||||  | |||||||    
T  47590503 ttaatagcttacaacggcaaaatgcctacaaataatatgataaaacctaagtcgccgaaatactcatgcttccggatgtgcaacgttgacgcccaaatca 47590404  T
Q  101 ttg 103  Q
    |||    
T  47590403 ttg 47590401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 48316711 - 48316792
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgca 82  Q
    |||||| ||||||||| |||||||||||||||||||||||| ||| ||||||  || |||||  ||| ||||||| ||||||    
T  48316711 ttaatagcatacaacgacaaaatgcctacaaataatatgataaaacctaaatcgccgaaatacccatgcttccggatctgca 48316792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 8001445 - 8001533
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| ||||||||||||||||||||| |||||||||||| ||| |||| | ||| ||||| ||||  |||||  |||||||| ||||    
T  8001445 ttaatagcatacaacggcaaaatgcctataaataatatgataaaacctaagtcaccgaaatactcatgattccgaatctgcaacgttga 8001533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 28044655 - 28044743
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| ||||||||||||||||| ||| |||||||||||| ||| |||||| ||| |||||  |||  |||||| |||||||| ||||    
T  28044655 ttaatagcatacaacggcaaaatgtctaaaaataatatgataaaacctaaatcaccgaaatacccatgtttccggatctgcaacgttga 28044743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 40993349 - 40993309
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgat 41  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  40993349 ttaataacatacaacgacaaaatgcctacaaataatatgat 40993309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 45349698 - 45349758
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaat 61  Q
    |||||| |||| ||||||||||||||||||||||||||||| ||| |||||| ||| ||||    
T  45349698 ttaatagcataaaacggcaaaatgcctacaaataatatgataaaacctaaatcaccgaaat 45349758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 37837357 - 37837480
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||| ||||||||||||||||||| ||||||||| ||| |||| | ||| ||||   ||| ||||||| |||||||| ||||  | |||||||    
T  37837357 ttaatagcataaaacggcaaaatgcctacaagtaatatgataaaacctaagtcaccgaaattcacatgcttccggatctgcaacgttgacgcccaaatca 37837456  T
Q  101 ttgtgtggatctgtgattgactga 124  Q
    |||  || || ||| |||||||||    
T  37837457 ttggttgaatttgtaattgactga 37837480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 38798973 - 38798834
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||  |||||||||||||||||||||||||||| |||||||| | ||| ||||   ||| ||||||| ||| |||  ||||  | |||||||    
T  38798973 ttaatagcataagacggcaaaatgcctacaaataatatgataaaatctaagtcaccgaaattcacatgcttccggatcttcaatgttgacgcccaaatca 38798874  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || || ||| ||||||||| || | ||||||||||    
T  38798873 ttggttgaatttgtaattgactgatgccgatctttcaata 38798834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 4999930 - 5000000
Alignment:
Q  3 aataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttcc 73  Q
    ||||||||||||||  |||||| ||| |||||||||||| |||| ||||| |||| ||||||||| |||||    
T  4999930 aataacatacaacgaaaaaatgtctataaataatatgataaaatttaaatcaccagaatattcatgcttcc 5000000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 25287085 - 25287147
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatat 63  Q
    |||||| |||||||| |||||||| |||||||||||||||| |||||||| | ||| ||||||    
T  25287085 ttaatagcatacaacagcaaaatggctacaaataatatgataaaatctaagtcaccgaaatat 25287147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 46244151 - 46244213
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatat 63  Q
    |||||||||||||| | |||||||||||||||||||||||| ||||  || | ||||||||||    
T  46244151 ttaataacatacaatgacaaaatgcctacaaataatatgataaaattaaagtgaccaaaatat 46244213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 43369653 - 43369698
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaat 46  Q
    |||||| ||||||||||||||||||||| |||||||||||| ||||    
T  43369653 ttaatatcatacaacggcaaaatgcctataaataatatgataaaat 43369698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 19297062 - 19296974
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| |||| ||| ||||||||||||||||||||||||| |||  ||| | ||| |||||  ||| ||||||| |||||||| ||||    
T  19297062 ttaatagcatataacagcaaaatgcctacaaataatatgataaaacttaagttaccgaaatacccatgcttccggatctgcaacgttga 19296974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 28407817 - 28407857
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgat 41  Q
    |||||| ||||||||||||||||| ||||||||||||||||    
T  28407817 ttaatagcatacaacggcaaaatgtctacaaataatatgat 28407857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 34899506 - 34899546
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgat 41  Q
    |||||| |||||||||||||||||| |||||||||||||||    
T  34899506 ttaatagcatacaacggcaaaatgcatacaaataatatgat 34899546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 24770438 - 24770299
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    ||||||||||| |||||||||||| |||| ||||||||||| ||| |||| |  || ||||   ||| |||| || ||| |||| ||||  | |||||||    
T  24770438 ttaataacataaaacggcaaaatgtctaccaataatatgataaaacctaagtctccgaaattcacatgcttctggatcttcaacgttgacgcccaaatca 24770339  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || || ||||||||||||| || | ||||||||||    
T  24770338 ttggttgaatttgtgattgactgatgccgatctttcaata 24770299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 5348491 - 5348529
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatg 39  Q
    |||||| |||||||||| |||||||||||||||||||||    
T  5348491 ttaatagcatacaacggtaaaatgcctacaaataatatg 5348529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 9977109 - 9977183
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgg 75  Q
    |||||| ||||||||| ||||||| ||| |||||||||||| |||||||| | | |||||||  |||| ||||||    
T  9977109 ttaatagcatacaacgacaaaatgtctaaaaataatatgataaaatctaactcatcaaaatacacataattccgg 9977183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 30756725 - 30756807
Alignment:
Q  8 catacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgat 90  Q
    |||| |||| ||||||||||| |||||||||||| |||  ||| | ||| ||||| |||| ||||||| |||||||| |||||    
T  30756725 cataaaacgacaaaatgcctataaataatatgataaaacttaagtcaccgaaatactcatgcttccggatctgcaacgttgat 30756807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 27341742 - 27341705
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatat 38  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  27341742 ttaatagcatataacggcaaaatgcctacaaataatat 27341705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 9e-28; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 14802018 - 14801879
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||  ||| |||| || |||||||| ||||  | |||||||    
T  14802018 ttaatagcatacaacggcaaaatgcctacaaataatatgatgaaatctaaatcaccaaaatacacattcttctggatctgcaacgttgacgcccaaatca 14801919  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || || |||||||| ||||||||  ||||||||||    
T  14801918 ttgattgaatttgtgattgtctgaagctaatctttcaata 14801879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 8102917 - 8102778
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||||||| | |||||||||||||||||||||||||||| |||||||||| | || |||||||||  ||| || |||||||| ||||  | |||||||    
T  8102917 ttaataacattccacggcaaaatgcctacaaataatatgataaaatctaaatcatcagaatattcatgtttctggatctgcaacgttgacgcccaaatca 8102818  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || || |||||||| ||||||||| ||||||||||    
T  8102817 ttgaatgaatttgtgattgtctgaagctgatctttcaata 8102778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 546222 - 546082
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||  |||| ||||  ||| |||| || |||||||| ||||  | |||||||    
T  546222 ttaatagcatacaacggcaaaatgcctacaaataatatgatgaaatctaaaccaccagaatacccatgcttctggatctgcaacgttgacgcccaaatca 546123  T
Q  101 ttgtgtgga-tctgtgattgactgaagctggtctttcaata 140  Q
    |||  || | | |||||||| ||||||||| ||||||||||    
T  546122 ttgattgaattttgtgattgtctgaagctgatctttcaata 546082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 9380206 - 9380075
Alignment:
Q  9 atacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatcattgtgtgg 108  Q
    |||||||| |||||||| ||||||||||||||| |||||||||| |||||||||  ||| |||| |  ||| ||||||||| |||||||||||||  ||     
T  9380206 atacaacgacaaaatgcatacaaataatatgataaaatctaaatcaccaaaatacccatgcttctgaatctacaacattgacacacaaatcattgattga 9380107  T
Q  109 atctgtgattgactgaagctggtctttcaata 140  Q
    |  ||||||||||| ||  |||||||||||||    
T  9380106 acatgtgattgactaaaattggtctttcaata 9380075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 12170659 - 12170557
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||||||| ||||||||||||||||||||||||||||| |||||| ||| |||||  ||| ||||||| |||||||| |||| |  |||||||    
T  12170659 ttaatagcatacaacagcaaaatgcctacaaataatatgatcaaacctaaatcaccgaaatacccatgcttccggatctgcaacgttgacatccaaatca 12170560  T
Q  101 ttg 103  Q
    |||    
T  12170559 ttg 12170557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 30493723 - 30493581
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||||||||||||||||||| || ||||| |||| ||||| |||||||||  ||| ||||||| | |||||| ||||    |||||||    
T  30493723 ttaatagcatacaacggcaaaatgcctacaaacaacatgataaaatataaatcaccaaaatacccatgcttccggatttgcaacgttgacgtccaaatca 30493624  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaatatga 143  Q
    |||  || || || |||||||||||| || |||||||||||||    
T  30493623 ttgattgaatatgagattgactgaagttgatctttcaatatga 30493581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 127850 - 127758
Alignment:
Q  11 acaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatcattg 103  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||| ||||| |||| ||||||  |||||||| ||||  | ||||||||||    
T  127850 acaacggcaaaatgcctacaaataatatgataaaatctaaatcaccgaaatactcatgcttccgaatctgcaacgttgacgcccaaatcattg 127758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 31297011 - 31296923
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| ||||||||| ||||||||||||||| |||||||| |||| ||||| |||| |||| |||| ||||||| |||||||| ||||    
T  31297011 ttaatagcatacaacgacaaaatgcctacaaacaatatgataaaatataaatcaccagaatactcatgcttccggatctgcaacgttga 31296923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 31852092 - 31852232
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||  ||||||| ||| |||||||||||| |||| ||||| |||| |||| |||| ||||||| |||||||| ||||    |||||||    
T  31852092 ttaatagcatacaacaacaaaatgtctataaataatatgataaaatttaaatcaccagaatactcatgcttccggatctgcaactttgacgttcaaatca 31852191  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaatat 141  Q
    |||  |  ||||||| |||||||||| || |||||||||||    
T  31852192 ttgatttaatctgtggttgactgaagttgatctttcaatat 31852232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 23128809 - 23128670
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||||||||||||||||||||||||||||||||| |||  ||| | ||| |||||  ||| ||||||| ||| |||| |||| |  |||||||    
T  23128809 ttaatagcatacaacggcaaaatgcctacaaataatatgataaaacttaagtcaccgaaatacccatgcttccggatctacaacgttgacatccaaatca 23128710  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || || ||| ||||||||| | || ||||||||||    
T  23128709 ttgattgaatttgtaattgactgatgttgatctttcaata 23128670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 8 - 143
Target Start/End: Original strand, 26588378 - 26588513
Alignment:
Q  8 catacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatcattgtgtg 107  Q
    |||||||| |||||||| ||| |||||||||||| ||||| |||| ||| ||||| |||| |||| || | |||||| |||| |  |||||||||   ||    
T  26588378 catacaacagcaaaatgtctaaaaataatatgataaaatcaaaatcacccaaatactcatgcttctggatttgcaacgttgacatccaaatcattaattg 26588477  T
Q  108 gatctgtgattgactgaagctggtctttcaatatga 143  Q
     || ||||||||||||||| || |||||||||||||    
T  26588478 aatgtgtgattgactgaagttgatctttcaatatga 26588513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 30776854 - 30776715
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||| | |||||||||||||||||||||||||||| |||||||||| |||| ||||  ||| ||||  | | |||||| || |  | |||||||    
T  30776854 ttaatagcattccacggcaaaatgcctacaaataatatgataaaatctaaatcaccagaatacccatgcttctagatttgcaacgttcacgcccaaatca 30776755  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || || |||||||| ||||||||| ||||||||||    
T  30776754 ttgaatgaatttgtgattgtctgaagctgatctttcaata 30776715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 32327129 - 32327199
Alignment:
Q  14 acggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaac 84  Q
    |||||||||||||||||||||||||||| ||| |||||| |||||| || |||| ||||||| ||||||||    
T  32327129 acggcaaaatgcctacaaataatatgataaaacctaaatcaccaaactactcatgcttccggatctgcaac 32327199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 3913473 - 3913561
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| ||||||| |||||||||||||||||||||||||| ||| |||||| ||| |||||  ||| |||| || |||||||| ||||    
T  3913473 ttaatagcatacaatggcaaaatgcctacaaataatatgataaaacctaaatcaccgaaatacccatgcttctggatctgcaacgttga 3913561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 30608414 - 30608516
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||||||||| ||||||||||||||||||||||| |||| ||| | ||| |||||  |||  |||| | |||||||| |||| || |||||||    
T  30608414 ttaatagcatacaacggtaaaatgcctacaaataatatgataaaatataagtcaccgaaatacccatgattccagatctgcaacgttgacacccaaatca 30608513  T
Q  101 ttg 103  Q
    |||    
T  30608514 ttg 30608516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 528249 - 528337
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| ||||||||| |||||| ||||||||||||||||| |||||||||| || | |||| | ||||||| |  |||||||| ||||    
T  528249 ttaatagcatacaacgacaaaatacctacaaataatatgataaaatctaaatcactagaatacttatacttcagaatctgcaacgttga 528337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 1523599 - 1523511
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| ||| | ||| |||||||||||||||||||||||| |||||||||| |||| ||||  ||| |||| || |||||||| ||||    
T  1523599 ttaatagcattccacgacaaaatgcctacaaataatatgataaaatctaaatcaccagaatacccatgcttctggatctgcaacgttga 1523511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 33053067 - 33053107
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgat 41  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  33053067 ttaatagcatacaacggcaaaatgcctacaaataatatgat 33053107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 217 - 288
Target Start/End: Complemental strand, 28844881 - 28844810
Alignment:
Q  217 tgagaatgaattacaatcataagattaaaataaagggataggatgaaaacatcacttaagttagtcatgtgc 288  Q
    |||||||||||||||  ||| |||||||||||||||| |  ||| |||||||||||||| | ||||||||||    
T  28844881 tgagaatgaattacagccatcagattaaaataaagggttgagattaaaacatcacttaaatgagtcatgtgc 28844810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 32191629 - 32191756
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||| ||||||||||||||||||  |||||| |||||||||| |||| |||  |||| ||| ||| | |||||| |||     |||||||    
T  32191629 ttaatagcatacaatggcaaaatgcctacaaattgtatgataaaatctaaatcaccagaatgctcatgctttcggatatgcaacgttggcgtccaaatca 32191728  T
Q  101 ttgtgtggatctgtgattgactgaagct 128  Q
    |||  || || |||||||||||||||||    
T  32191729 ttgattgaatatgtgattgactgaagct 32191756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 606395 - 606293
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||| |||||||||||||||||||||||||| |||  ||| | ||| |||||  |||  |||||| |||||||| |||||   |||||||    
T  606395 ttaatagcatacaatggcaaaatgcctacaaataatatgataaaacttaagtcaccgaaatacccatgtttccggatctgcaacgttgatgtccaaatca 606296  T
Q  101 ttg 103  Q
    |||    
T  606295 ttg 606293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 1933591 - 1933725
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||||||| | ||||||| || | |||||||||| |||| ||||| |||| |||| ||||  |||||| |||||||| ||||    |||||||    
T  1933591 ttaatagcatacaacagaaaaatgcatatagataatatgataaaatataaatcaccagaataatcatgtttccggatctgcaacgttgacgtccaaatca 1933690  T
Q  101 ttgtgtggatctgtgattgactgaagctggtcttt 135  Q
    |||  || |||||||||||| ||||| || |||||    
T  1933691 ttgattgaatctgtgattgattgaagttgatcttt 1933725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 20226042 - 20225993
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaa 50  Q
    |||||| ||||||||| |||||||||||||||||||||||| || |||||    
T  20226042 ttaatagcatacaacgacaaaatgcctacaaataatatgataaattctaa 20225993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 22120026 - 22119977
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaa 50  Q
    |||||| ||||||||| |||||||||||||||||||||||| || |||||    
T  22120026 ttaatagcatacaacgacaaaatgcctacaaataatatgataaattctaa 22119977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 67900 - 67940
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgat 41  Q
    |||||| ||||||||||||||||||||| ||||||||||||    
T  67900 ttaatagcatacaacggcaaaatgcctataaataatatgat 67940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 7976086 - 7976174
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| |||||||||||||||||||||||||   |||||| |||| ||||| |||| ||||  ||| ||||||| ||| |||| ||||    
T  7976086 ttaatagcatacaacggcaaaatgcctacaaacggtatgataaaatttaaatcaccagaatacccatgcttccggatctacaacgttga 7976174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 14846120 - 14846180
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaat 61  Q
    |||||| |||| ||| ||||||||||||||||||||||||| ||| |||| | ||||||||    
T  14846120 ttaatagcataaaacagcaaaatgcctacaaataatatgataaaacctaagtcaccaaaat 14846180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 34018750 - 34018650
Alignment:
Q  2 taataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatcat 101  Q
    |||||| ||||||| | ||||||||||||||||||||||| |||  ||| | ||  ||||| |||| ||||||| |||||||| ||||  | ||||||||    
T  34018750 taataatatacaacagtaaaatgcctacaaataatatgataaaacataagtcactgaaatactcatgcttccggatctgcaacgttgacgcccaaatcat 34018651  T
Q  102 t 102  Q
    |    
T  34018650 t 34018650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 29255345 - 29255468
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||||||| |  |||||||||||||||||||||| |||||||| | ||| |||||  |||  |||||| |||| ||| ||||  | |||||||    
T  29255345 ttaatagcatacaacagtgaaatgcctacaaataatatgataaaatctaagtcaccgaaatacccatgtttccggatctgtaacgttgacgcccaaatca 29255444  T
Q  101 ttgtgtggatctgtgattgactga 124  Q
    |||  || || ||| |||||||||    
T  29255445 ttgattgaatttgtaattgactga 29255468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 29743179 - 29743100
Alignment:
Q  10 tacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    ||||||| ||||||||||| |||||||||||| | |||||||| |||| |||| ||   ||||||| |||||||| ||||    
T  29743179 tacaacgacaaaatgcctataaataatatgataagatctaaatcaccagaatactctagcttccggatctgcaacgttga 29743100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 13546600 - 13546649
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaa 50  Q
    |||||| ||||||||| |||||| ||||||||||||||||| || |||||    
T  13546600 ttaatagcatacaacgacaaaatacctacaaataatatgataaattctaa 13546649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 21426585 - 21426622
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatat 38  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  21426585 ttaatagcatacaacggcaaaatgtctacaaataatat 21426622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 34185604 - 34185653
Alignment:
Q  13 aacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaata 62  Q
    |||| |||||| ||||||||||||||||| |||||||||| |||| ||||    
T  34185604 aacgacaaaatacctacaaataatatgataaaatctaaatcaccagaata 34185653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 4010430 - 4010494
Alignment:
Q  20 aaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaac 84  Q
    ||||||||| |||||||||||| || ||||| | ||| ||||| |||| ||||||| ||||||||    
T  4010430 aaatgcctataaataatatgataaattctaagtcaccgaaatactcatgcttccggatctgcaac 4010494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9341550 - 9341590
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgat 41  Q
    |||||| ||||||||| ||||||||||||||| ||||||||    
T  9341550 ttaatagcatacaacgacaaaatgcctacaaacaatatgat 9341590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 57987 - 58129
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||| |||||||||||||||||||| |||||||| |||||||||| |||| |||| |||| ||||||| |||||||  ||||    |||||||    
T  57987 ttaatagcatataacggcaaaatgcctacaaaaaatatgatgaaatctaaatcaccagaatactcatgcttccggatctgcaatgttgacgtccaaatca 58086  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaatatga 143  Q
    | |  || ||||||||||||||||||||| ||||||| |||||    
T  58087 tcgattgaatctgtgattgactgaagctgatctttcagtatga 58129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 9e-25; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 14916085 - 14916226
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||||||| |||||||||||||||| |||||||| |||||||||| | | |||||||||| ||||||| |||||||||| ||    |||||||    
T  14916085 ttaatagcatacaactgcaaaatgcctacaaacaatatgataaaatctaaatcaac-aaatattcatgcttccggatctgcaacatggacgtccaaatca 14916183  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaatatga 143  Q
    |||  || |||| ||||||| ||||| ||||||||||||||||    
T  14916184 ttgattgaatctctgattgattgaagttggtctttcaatatga 14916226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 7677180 - 7677303
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||| |||| | ||| |||||||||| ||||||| |||||||| ||||  | |||||||    
T  7677180 ttaataacatacaacggcaaaatgcttacaaataatatgataaaacctaagtcaccgaaatattcatgcttccggatctgcaacgttgacgctcaaatca 7677279  T
Q  101 ttgtgtggatctgtgattgactga 124  Q
    |||   | |||||| |||||||||    
T  7677280 ttggtcgaatctgtaattgactga 7677303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 41896709 - 41896570
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||| |||||||||||||||||||||||| |||||||||| |||| |||| |||| ||||  | |||||||| ||||| |  ||||||    
T  41896709 ttaatagcatacaacgacaaaatgcctacaaataatatgatgaaatctaaatcaccagaatactcatgcttctagatctgcaacgttgatgcctaaatca 41896610  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    ||   || || |||||||| ||||||||| ||||||||||    
T  41896609 ttaattgaatttgtgattgtctgaagctgatctttcaata 41896570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 42046413 - 42046274
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||| | | |||||||||||||||||||||||| |||||||||| |||| ||||  ||| |||| || |||||||||||||  | |||||||    
T  42046413 ttaatagcatacgatgtcaaaatgcctacaaataatatgatgaaatctaaatcaccagaatacccatgcttctggatctgcaacattgacgcccaaatca 42046314  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || || |||||||| ||||||||| ||||||||||    
T  42046313 ttgattgaatttgtgattgtctgaagctgatctttcaata 42046274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 7198092 - 7198194
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||| |||||| ||| ||||||||||||| |||||||||| |||||||||||||| ||||||| |||||||| |||| |  |||||||    
T  7198092 ttaatagcatacaacgacaaaattcctgcaaataatatgataaaatctaaatcaccaaaatattcatgcttccggatctgcaacgttgacatccaaatca 7198191  T
Q  101 ttg 103  Q
    |||    
T  7198192 ttg 7198194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 15344500 - 15344358
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||| ||||||||||||||||||||||||  ||||||||| |||| |||| || | |||| || |||||||| ||||    |||||||    
T  15344500 ttaatagcatacaacgacaaaatgcctacaaataatatgatataatctaaatcaccagaatactcttgcttctggatctgcaacgttgacgtccaaatca 15344401  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaatatga 143  Q
    |||  || |||||||||||||||||  || |||||||||||||    
T  15344400 ttgattgaatctgtgattgactgaacttgatctttcaatatga 15344358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 15433565 - 15433423
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||| ||||||||||||||||||||||||  ||||||||| |||| |||| || | |||| || |||||||| ||||    |||||||    
T  15433565 ttaatagcatacaacgacaaaatgcctacaaataatatgatataatctaaatcaccagaatactcttgcttctggatctgcaacgttgacgtccaaatca 15433466  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaatatga 143  Q
    |||  || |||||||||||||||||  || |||||||||||||    
T  15433465 ttgattgaatctgtgattgactgaacttgatctttcaatatga 15433423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 15524869 - 15524727
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||| ||||||||||||||||||||||||  ||||||||| |||| |||| || | |||| || |||||||| ||||    |||||||    
T  15524869 ttaatagcatacaacgacaaaatgcctacaaataatatgatataatctaaatcaccagaatactcttgcttctggatctgcaacgttgacgtccaaatca 15524770  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaatatga 143  Q
    |||  || |||||||||||||||||  || |||||||||||||    
T  15524769 ttgattgaatctgtgattgactgaacttgatctttcaatatga 15524727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 16247120 - 16247222
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||| | | | |||||  ||| ||||||| |||||||||||||| | |||||||    
T  16247120 ttaatagcatacaacggcaaaatgccttcaaataatatgatcaaatctaagtcagcgaaatacccatgcttccggatctgcaacattgatgcccaaatca 16247219  T
Q  101 ttg 103  Q
    |||    
T  16247220 ttg 16247222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 18890596 - 18890735
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||| |||||||||||||||||||||||| |||||||||| |||| ||||   ||  ||| || |||||||| ||||  | |||||||    
T  18890596 ttaatagcatacaacgacaaaatgcctacaaataatatgataaaatctaaatcaccataatacctatgtttctggatctgcaacgttgacgcccaaatca 18890695  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || || |||||||| ||||||||| ||||||||||    
T  18890696 ttgattgaatttgtgattgtctgaagctgatctttcaata 18890735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 471061 - 471202
Alignment:
Q  1 ttaataacatacaacggcaaaa--tgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaat 98  Q
    ||||||||||||| || |||||  ||||||||||||||||||| |||||||||| | || ||||  ||| ||||||| |||||||| ||||  |||||||    
T  471061 ttaataacatacatcgacaaaaaatgcctacaaataatatgataaaatctaaatcatcagaatacccatgcttccggatctgcaacgttgacgcacaaat 471160  T
Q  99 cattgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||||  || |||| ||||||| ||||| || ||||||||||    
T  471161 cattgattgaatctatgattgagtgaagatgatctttcaata 471202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 8867995 - 8867895
Alignment:
Q  3 aataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatcatt 102  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||| |||| ||||| ||  ||||| | ||| |||| ||||| | |||||||||    
T  8867995 aataacatacaacgacaaaatgcctacaaataatatgataaaatctaaatcaccagaatatccaagcttccagatcttcaactttgatgcccaaatcatt 8867896  T
Q  103 g 103  Q
    |    
T  8867895 g 8867895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 20553138 - 20553226
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| |||||||||||||||||||||||||||||||||| ||| |||| | ||| ||||| |||| ||||||| |||||||| ||||    
T  20553138 ttaatagcatacaacggcaaaatgcctacaaataatatgataaaacctaagtcaccgaaatactcatgcttccggatctgcaacgttga 20553226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 29617171 - 29617310
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||  |||||||||||||||||||||||| |||||||||| |||| ||||   ||  ||  || |||||||| ||||    |||||||    
T  29617171 ttaatagcatacaacaacaaaatgcctacaaataatatgataaaatctaaatcaccagaataacaatgtttatggatctgcaacgttgacgtccaaatca 29617270  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || |||||||||||||||||| |||||||||||||    
T  29617271 ttgattgaatctgtgattgactgaagttggtctttcaata 29617310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 39657638 - 39657507
Alignment:
Q  9 atacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatcattgtgtgg 108  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||| ||||  ||| |||| || |||||||| ||||    ||||||||||  ||     
T  39657638 atacaacggcaaaatgcctacaaataatatgatgaaatctaaatcaccagaatacccatgcttctggatctgcaacgttgacgtccaaatcattgattga 39657539  T
Q  109 atctgtgattgactgaagctggtctttcaata 140  Q
    || | |||||| ||||||||  ||||||||||    
T  39657538 atttatgattgtctgaagctaatctttcaata 39657507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 1236594 - 1236736
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||||||||||||||| ||||| ||||||  ||||||||| |||| |||| || | |||| || |||||||| ||||    || ||||    
T  1236594 ttaatagcatacaacggcaaaatgcctaaaaatagtatgatataatctaaatcaccagaatactcttgcttctggatctgcaacgttgacgtccagatca 1236693  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaatatga 143  Q
    |||  || || ||||||||||||||| || |||||||||||||    
T  1236694 ttgattgaatatgtgattgactgaagttgatctttcaatatga 1236736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 1239294 - 1239436
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||| ||||||||||||||||| ||||||  ||||||||| |||| |||| || | |||| || |||||||| ||||    || ||||    
T  1239294 ttaatagcatacaacgtcaaaatgcctacaaatagtatgatataatctaaatcaccagaatactcttgcttctggatctgcaacgttgacgtccagatca 1239393  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaatatga 143  Q
    |||  || || ||||||||||||||| || |||||||||||||    
T  1239394 ttgattgaatatgtgattgactgaagttgatctttcaatatga 1239436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 23 - 143
Target Start/End: Original strand, 24099169 - 24099294
Alignment:
Q  23 tgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatcattgtgtggatctgt-----gat 117  Q
    ||||||||||||||||||| |||||||||| |||||||||||| | ||||||| |||||||| ||||   |||||||||||  || || |||     |||    
T  24099169 tgcctacaaataatatgataaaatctaaatcaccaaaatattctttcttccggatctgcaacgttgacgtacaaatcattgaatgaatttgtgatgcgat 24099268  T
Q  118 tgactgaagctggtctttcaatatga 143  Q
    |||||||||||| | |||||||||||    
T  24099269 tgactgaagctgatttttcaatatga 24099294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 20559641 - 20559729
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| ||||||||||||||||||| |||||||||||||| ||| |||| | ||| ||||| |||| ||||||| |||||||| ||||    
T  20559641 ttaatagcatacaacggcaaaatgcccacaaataatatgataaaacctaagtcaccgaaatactcatgcttccggatctgcaacgttga 20559729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 20571203 - 20571291
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| ||||||||||||||||||| |||||||||||||| ||| |||| | ||| ||||| |||| ||||||| |||||||| ||||    
T  20571203 ttaatagcatacaacggcaaaatgcccacaaataatatgataaaacctaagtcaccgaaatactcatgcttccggatctgcaacgttga 20571291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 43833893 - 43833981
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| |||||||||||||||||||||||||||||||||| ||| |||||| |||| |||| |||| ||||  | |||||||| ||||    
T  43833893 ttaatagcatacaacggcaaaatgcctacaaataatatgataaaaactaaatcaccagaatactcatgcttctagatctgcaacgttga 43833981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 14585869 - 14585730
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||||||||| |||||||||||||||||| |||||||||| ||||  |||  ||| |||| || |||||||| ||||    |||||||    
T  14585869 ttaatagcatacaacggcaaaacgcctacaaataatatgatgaaatctaaatcaccaggatacccatgcttctggatctgcaacgttgacgtccaaatca 14585770  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
     ||  || || |||||||| ||||||||| | ||||||||    
T  14585769 atgattgaatttgtgattgtctgaagctgatatttcaata 14585730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 8443427 - 8443545
Alignment:
Q  20 aaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatcattgtgtggatctgtgattg 119  Q
    ||||| ||||||||||||||||||||||||||| |||| ||||    | ||||||| |||||||| |||||   ||||||||||  || || ||||||||    
T  8443427 aaatgtctacaaataatatgatcaaatctaaatcaccataataccagtgcttccggatctgcaacgttgatgtccaaatcattgattgaatatgtgattg 8443526  T
Q  120 actgaagctggtctttcaa 138  Q
    ||||||| || ||||||||    
T  8443527 actgaagttgatctttcaa 8443545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 18846370 - 18846450
Alignment:
Q  8 catacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattg 88  Q
    |||||||  |||||||||||||||||||||| || |||||||||| |||| |||| ||||  |||||||||| ||||||||    
T  18846370 catacaatagcaaaatgcctacaaataatataataaaatctaaatcaccataatactcatgtttccgggtctacaacattg 18846450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 23230835 - 23230747
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| ||||||||| |||||||||||||||||||||||| ||| |||| | ||| |||||  ||| ||||||| |||||||| ||||    
T  23230835 ttaatagcatacaacgacaaaatgcctacaaataatatgataaaacctaagtcaccgaaatacccatgcttccggatctgcaacgttga 23230747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 37971475 - 37971387
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| ||||||||||||||||||||||||||||| |||| ||| |||| | ||| ||||| ||||  |||||| |||||||| ||||    
T  37971475 ttaatagcatacaacggcaaaatgcctacaaataatgtgataaaacctaagtcaccgaaatactcatgtttccggatctgcaacgttga 37971387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 5333621 - 5333482
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||  |||||||| ||||||||||||||  |||||||||| || | |||| |||| |||| || ||| |||| ||||  | ||||| |    
T  5333621 ttaatagcatacaacaacaaaatgcatacaaataatatgacaaaatctaaatcactagaatactcatgcttctggatctacaacgttgacgcccaaataa 5333522  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || || ||||||||||||||| || ||||||||||    
T  5333521 ttgattgaatatgtgattgactgaagttgatctttcaata 5333482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 7883146 - 7883221
Alignment:
Q  9 atacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaac 84  Q
    ||||||||||||||||||||||||||||||||| ||| |||| | ||| |||||  ||| ||||||| ||||||||    
T  7883146 atacaacggcaaaatgcctacaaataatatgataaaacctaagtcaccgaaatacccatgcttccggatctgcaac 7883221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 10377881 - 10377779
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||||||||||||||||||||||||||||||||| |||  ||| |  || |||||  ||| ||||||| |||||||| |||||   |||||||    
T  10377881 ttaatagcatacaacggcaaaatgcctacaaataatatgataaaacttaagtcgccgaaatacccatgcttccggatctgcaacgttgatgtccaaatca 10377782  T
Q  101 ttg 103  Q
    |||    
T  10377781 ttg 10377779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 28086709 - 28086759
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaa 51  Q
    |||||| ||||||||| |||||||||||||||||||||||| |||||||||    
T  28086709 ttaatagcatacaacgacaaaatgcctacaaataatatgataaaatctaaa 28086759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 3673625 - 3673545
Alignment:
Q  9 atacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    ||||||||||||||||||||||||||||||||| |||  ||| | ||  ||||| |||| ||||||| |||||||| ||||    
T  3673625 atacaacggcaaaatgcctacaaataatatgattaaacttaagtcactgaaatactcatgcttccggatctgcaacgttga 3673545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 31013505 - 31013545
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgat 41  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  31013505 ttaatagcatacaacggcaaaatgcctacaaataatatgat 31013545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 16928654 - 16928777
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||| |||||||||||||||||||||||||| ||| |||| | ||| |||||  ||  ||| ||| |||||||| |||||   |||||||    
T  16928654 ttaatagcatacaatggcaaaatgcctacaaataatatgataaaacctaagtcaccgaaatacccacgctttcggatctgcaacgttgatgtccaaatca 16928753  T
Q  101 ttgtgtggatctgtgattgactga 124  Q
    |||  || || ||| |||||||||    
T  16928754 ttggttgaatttgtaattgactga 16928777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 33347418 - 33347557
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||| | |||||||||||||||||||||||| || ||| | | ||| |||||  ||| ||| ||| || ||||| | ||  |  ||||||    
T  33347418 ttaatagcatacaatgacaaaatgcctacaaataatatgataaattctgagtcaccgaaatacccatgctttcggatccgcaacgtcgacgcctaaatca 33347517  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || |||||||||||||||||| || ||||||||||    
T  33347518 ttgattgaatctgtgattgactgaagttgatctttcaata 33347557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 45445708 - 45445847
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||| |||  |||||||||||||||||||||||| |||||||| | ||||||||   ||| ||||||| | | |||| ||||  | |||||||    
T  45445708 ttaatagcataaaacaacaaaatgcctacaaataatatgataaaatctaagtcaccaaaattcacatgcttccggattttcaacgttgacgcccaaatca 45445807  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || || ||| ||||||||| || | ||||||||||    
T  45445808 ttggttgaatttgtaattgactgatgccgatctttcaata 45445847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 5046945 - 5046879
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcat 67  Q
    ||||||||||||||||  ||||||||||||||||||||||| || ||||| | ||  ||||||||||    
T  5046945 ttaataacatacaacgataaaatgcctacaaataatatgataaattctaagtcactgaaatattcat 5046879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 27110362 - 27110464
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||||||||  |||||| |||||||||||||||| |||||||| | || ||||||  ||| ||||| | |||||||| ||||  | |||||||    
T  27110362 ttaatagcatacaacgataaaatgtctacaaataatatgataaaatctaagtcactaaaatacacatgcttccagatctgcaacgttgacgctcaaatca 27110461  T
Q  101 ttg 103  Q
    |||    
T  27110462 ttg 27110464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 40211199 - 40211301
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||||||||||| ||||| ||||||||||||||| ||||| || | | | ||||| |||| ||||||| ||| |||| ||||  | |||||||    
T  40211199 ttaatagcatacaacggcataatgcttacaaataatatgataaaatccaagtcaacgaaatactcatgcttccggatctacaacgttgacgcccaaatca 40211298  T
Q  101 ttg 103  Q
    |||    
T  40211299 ttg 40211301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 9637306 - 9637407
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||| ||||||||||| |||||||||||| ||| |||| | ||| ||||| ||||  |||||  |||||||| ||||  | |||||||    
T  9637306 ttaatagcatacaacgacaaaatgcctaaaaataatatgataaaacctaagttaccgaaatactcatgtttccgaatctgcaacgttgacgctcaaatca 9637405  T
Q  101 tt 102  Q
    ||    
T  9637406 tt 9637407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 29939492 - 29939443
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaa 50  Q
    |||||| ||||||||||||||||| |||||||||||||||| ||| ||||    
T  29939492 ttaatatcatacaacggcaaaatgactacaaataatatgataaaacctaa 29939443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 14913279 - 14913235
Alignment:
Q  2 taataacatacaacggcaaaatgcctacaaataatatgatcaaat 46  Q
    ||||| |||||||||||||||| ||||||||||||||||| ||||    
T  14913279 taatagcatacaacggcaaaatacctacaaataatatgataaaat 14913235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 25238493 - 25238535
Alignment:
Q  4 ataacatacaacggcaaaatgcctacaaataatatgatcaaat 46  Q
    ||||||||||||||||||||| ||| |||||||||||| ||||    
T  25238493 ataacatacaacggcaaaatgtctataaataatatgataaaat 25238535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 34493194 - 34493128
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcat 67  Q
    |||||||||| ||||| ||||||||||| | ||||||| || |||||||| | ||||||||| ||||    
T  34493194 ttaataacatgcaacgacaaaatgcctatatataatatcataaaatctaattcaccaaaatactcat 34493128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 26469055 - 26469104
Alignment:
Q  13 aacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaata 62  Q
    |||| |||||| ||||||||||||||||| |||||||||| |||| ||||    
T  26469055 aacgacaaaatacctacaaataatatgataaaatctaaatcaccagaata 26469104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 30568218 - 30568267
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaa 50  Q
    |||||| |||| ||||||||||||||||||||||| ||||| ||| ||||    
T  30568218 ttaatagcataaaacggcaaaatgcctacaaataacatgataaaacctaa 30568267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 40618970 - 40619015
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaat 46  Q
    |||||| |||||||||||||||||| |||| |||||||||| ||||    
T  40618970 ttaatagcatacaacggcaaaatgcatacacataatatgataaaat 40619015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 267
Target Start/End: Original strand, 42756668 - 42756729
Alignment:
Q  206 tatgagaatggtgagaatgaattacaatcataagattaaaataaagggataggatgaaaaca 267  Q
    |||||||||||||||||| |||| ||  ||| |||||||||| |||||||| ||| ||||||    
T  42756668 tatgagaatggtgagaataaattgcagccattagattaaaattaagggataagattaaaaca 42756729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 17693510 - 17693634
Alignment:
Q  1 ttaataacatacaacggcaaaa-tgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatc 99  Q
    |||||||||||||||  ||||| ||||||||||||||||||| |||  ||| | | | ||||| |||| ||||||| |||||||  ||||  | ||||||    
T  17693510 ttaataacatacaacaacaaaaatgcctacaaataatatgataaaacataagtcatcgaaatactcatgcttccggatctgcaatgttgacgcccaaatc 17693609  T
Q  100 attgtgtggatctgtgattgactga 124  Q
    ||||  || || ||| |||||||||    
T  17693610 attggttgaatttgtaattgactga 17693634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 1e-23; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 21686141 - 21686229
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||| |||||| ||||||||| |||| ||||||| |||||||| ||||    
T  21686141 ttaataacatacagcggcaaaatgcctacaaataatatgataaaacctaaatcaccaaaatactcatgcttccggatctgcaacgttga 21686229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 52944521 - 52944379
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||| |||  ||||||||||||||| |||||||| |||||||||| |||| ||||  ||| ||||||| |||||||| ||||    |||||||    
T  52944521 ttaatagcatataactacaaaatgcctacaaaaaatatgatgaaatctaaatcaccagaatacccatgcttccggatctgcaacgttgacgtccaaatca 52944422  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaatatga 143  Q
    | |  || ||||||||||||||||||||| |||||||||||||    
T  52944421 tcgattgaatctgtgattgactgaagctgatctttcaatatga 52944379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 27652153 - 27652015
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||||||||||| |||||||||||||||| |||||||||  || | ||||  ||| |||| || |||||||| ||||||| |||||||    
T  27652153 ttaatagcatacaacggcaaaatgtctacaaataatatgatgaaatctaaa-cactagaatacccatgcttctggatctgcaacgttgatacccaaatca 27652055  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || || |||||||| || |||||| ||||||||||    
T  27652054 ttgattgaatttgtgattgtctaaagctgatctttcaata 27652015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 31891186 - 31891325
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||||||||||||||||||||||||| || |||||||||| |||| |||| |||| |||| || | |||||| ||||  | |||||||    
T  31891186 ttaatagcatacaacggcaaaatgcctacaaataatataatgaaatctaaatcaccagaatactcatgcttctggatttgcaacgttgacgcccaaatca 31891285  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    | || || || |||||||| ||||| ||| | ||||||||    
T  31891286 tggtttgaatttgtgattgtctgaaactgatttttcaata 31891325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 36194918 - 36194780
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||| |||| ||||  |||  ||| || |||||||| |||||   |||||||    
T  36194918 ttaatagcatacaacggcaaaatgcctacaaataatatgatgaaatctaaatcaccagaatacccatgtttctggatctgcaactttgat-gtcaaatca 36194820  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || || ||||||||  |||||||| ||||||||||    
T  36194819 ttgattgaatttgtgattgtttgaagctgatctttcaata 36194780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 47320311 - 47320434
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||||||||||||||||||||||||||||  ||||||||| |||| |||| || | |||| || |||||||| ||||    |||||||    
T  47320311 ttaatagcatacaacggcaaaatgcctacaaataatatgatataatctaaatcaccagaatactcttgcttctggatctgcaacgttgacgtccaaatca 47320410  T
Q  101 ttgtgtggatctgtgattgactga 124  Q
    |||  || ||||||||||||||||    
T  47320411 ttgattgaatctgtgattgactga 47320434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 2520989 - 2520901
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| |||||||||||||||||||||||||||||| ||| |||||||||| ||| |||||  ||| ||||||| |||||||| ||||    
T  2520989 ttaatagcatacaacggcaaaatgcctacaaataatacgataaaatctaaatcaccgaaatacccatgcttccggatctgcaacgttga 2520901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 10258802 - 10258878
Alignment:
Q  8 catacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaac 84  Q
    |||||||| |||||||| |||||||||||||||| |||||||| | |||||||||||||| ||||||||| ||||||    
T  10258802 catacaacagcaaaatgtctacaaataatatgataaaatctaagtcaccaaaatattcatgcttccgggtatgcaac 10258878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 29960855 - 29960937
Alignment:
Q  8 catacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgat 90  Q
    ||||||||||||||||||||||||||| |||||| |||||||||| || |||||||| ||  |||||| |||||||| |||||    
T  29960855 catacaacggcaaaatgcctacaaatagtatgataaaatctaaatcactaaaatatttatgtttccggatctgcaacgttgat 29960937  T

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Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 22611393 - 22611305
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| |||||||||||||||||||||||||||||||||| |||  ||| | ||| ||||| |||| ||||||| |||||||| ||||    
T  22611393 ttaataccatacaacggcaaaatgcctacaaataatatgataaaacttaagtcaccgaaatactcatgcttccggatctgcaacgttga 22611305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 29120278 - 29120360
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaa 83  Q
    |||||| ||||||||| |||||||||||||||||||||||| |||||||| | ||| ||||| |||| ||||| | |||||||    
T  29120278 ttaatagcatacaacgacaaaatgcctacaaataatatgataaaatctaagttaccgaaatactcatgcttccagatctgcaa 29120360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 45418722 - 45418620
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||| |||||||||||||||||||||||| |||||||| | ||| ||||| |  | ||| ||| |||||||| ||||| | |||||||    
T  45418722 ttaatagcatacaacgacaaaatgcctacaaataatatgataaaatctaagtcaccgaaatactagtgctttcggatctgcaacgttgatgcccaaatca 45418623  T
Q  101 ttg 103  Q
    |||    
T  45418622 ttg 45418620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 19853411 - 19853499
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| ||||||||||||||||||||| |||||||||||| |||  ||| | ||| |||||| ||| ||||||| |||||||| ||||    
T  19853411 ttaatagcatacaacggcaaaatgcctagaaataatatgataaaacttaagtcaccgaaatatccatgcttccggatctgcaacgttga 19853499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 36204278 - 36204366
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    ||||||||||| || ||||||||  |||||||||||||||| |||||||||| |||| |||||||   ||||||| |||||||| ||||    
T  36204278 ttaataacatataatggcaaaatatctacaaataatatgataaaatctaaatcaccagaatattctctcttccggatctgcaacgttga 36204366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 52933848 - 52933912
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattc 65  Q
    ||||||||||||||  ||||||| ||||||||||||||||| |||||||||| |||| |||||||    
T  52933848 ttaataacatacaaaagcaaaatacctacaaataatatgataaaatctaaatcaccataatattc 52933912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 53811238 - 53811150
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| ||||||||| |||||||||||||||||||||||| |||  ||| | ||| ||||| |||| ||||||| |||||||| ||||    
T  53811238 ttaatagcatacaacgccaaaatgcctacaaataatatgataaaacttaagtcaccgaaatactcatgcttccggatctgcaacgttga 53811150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 21662647 - 21662508
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||  |||| || |||||||||||||||| ||| |||| | ||| |||||  ||| ||||||| |||||||| ||||  | |||||||    
T  21662647 ttaatagcatacaacaccaaagtgtctacaaataatatgataaaacctaagtcaccgaaatacccatgcttccggatctgcaacgttgacgctcaaatca 21662548  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  ||||| ||| ||||||||| | || ||||||||||    
T  21662547 ttgattggatttgtaattgactgatgttgatctttcaata 21662508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 21671411 - 21671272
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||  |||| || |||||||||||||||| ||| |||| | ||| |||||  ||| ||||||| |||||||| ||||  | |||||||    
T  21671411 ttaatagcatacaacaccaaagtgtctacaaataatatgataaaacctaagtcaccgaaatacccatgcttccggatctgcaacgttgacgctcaaatca 21671312  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  ||||| ||| ||||||||| | || ||||||||||    
T  21671311 ttgattggatttgtaattgactgatgttgatctttcaata 21671272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 6155122 - 6155184
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatat 63  Q
    |||||| ||||||||| ||||||||||||||||||||||||  ||||||||| |||| |||||    
T  6155122 ttaatagcatacaacgacaaaatgcctacaaataatatgatagaatctaaatcaccagaatat 6155184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 36161921 - 36161855
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcat 67  Q
    ||||||||||| |||| | |||||||||||||||||||||| |||||||||| || |||||| ||||    
T  36161921 ttaataacatataacgaccaaatgcctacaaataatatgataaaatctaaatcacgaaaatactcat 36161855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 37465692 - 37465630
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatat 63  Q
    |||||| ||||||||| |||||||| ||||||||||||||| |||||||||| |||| |||||    
T  37465692 ttaatagcatacaacgacaaaatgcttacaaataatatgataaaatctaaatcaccagaatat 37465630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18935992 - 18935931
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaata 62  Q
    |||||||| |||||  ||||||||||||||||||||||||| |||||||||| |||| ||||    
T  18935992 ttaataacgtacaatagcaaaatgcctacaaataatatgatgaaatctaaatcaccagaata 18935931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 22038719 - 22038843
Alignment:
Q  19 aaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatcattgtgtggatctgtgatt 118  Q
    |||||||||||||||| |||||| |||| ||||| ||| |||||  ||| |||| || ||||||||||||||    ||||||||   || || |||||||    
T  22038719 aaaatgcctacaaatattatgataaaatttaaatcaccgaaatacacatgcttctggatctgcaacattgatgtcaaaatcatttattgaatatgtgatt 22038818  T
Q  119 gactgaagctggtctttcaatatga 143  Q
    ||||||||  | |||||||||||||    
T  22038819 gactgaagtagatctttcaatatga 22038843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 43510406 - 43510318
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    ||||| |||||||||| |||||||||||||||||||||||| |||  ||| | ||| |||||  ||| |||| || |||||||||||||    
T  43510406 ttaatgacatacaacgacaaaatgcctacaaataatatgataaaacttaagtcaccgaaatacccatgcttcaggatctgcaacattga 43510318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 10496545 - 10496406
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||| || ||||||||||||||||||||||||| ||| |||| | ||| |||||  ||| ||| ||| |||||||  ||||  | |||||||    
T  10496545 ttaatagcatacgacagcaaaatgcctacaaataatatgataaaacctaactcaccgaaatacccatgcttacggatctgcaaagttgacgcccaaatca 10496446  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || || ||| ||||||||| || | ||||||||||    
T  10496445 ttggttgaatttgtaattgactgatgccgatctttcaata 10496406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 22305520 - 22305587
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcata 68  Q
    |||||| ||||||||| |||||| ||||||||||||||||| |||||||| | | ||||||| |||||    
T  22305520 ttaatagcatacaacgacaaaatacctacaaataatatgataaaatctaagtcatcaaaatactcata 22305587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 26633571 - 26633658
Alignment:
Q  2 taataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    ||||| |||||||||| |||||||||| |  ||||||||| ||| |||| | ||  |||||||||| ||||||| |||||||||||||    
T  26633571 taatagcatacaacggtaaaatgcctatatttaatatgataaaacctaagtcacagaaatattcatgcttccggatctgcaacattga 26633658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 56040545 - 56040628
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaac 84  Q
    |||||| ||||||||| |||||||||||||||||||||||| ||| |||| | ||| |||||  ||| |||| || ||||||||    
T  56040545 ttaatagcatacaacgacaaaatgcctacaaataatatgataaaacctaagtcaccgaaatacccatgcttctggatctgcaac 56040628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 290
Target Start/End: Original strand, 51682012 - 51682094
Alignment:
Q  208 tgagaatggtgagaatgaattacaatcataagattaaaataaagggataggatgaaaacatcacttaagttagtcatgtgcca 290  Q
    |||||||||||||||| |||||||  ||  |||||||||  |||||||  ||| ||||||| || ||||||||||||||||||    
T  51682012 tgagaatggtgagaataaattacagccaatagattaaaagcaagggatgcgattaaaacataacctaagttagtcatgtgcca 51682094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 51888110 - 51888176
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcat 67  Q
    |||||| ||| ||| ||||||| |||||||||||||||||| |||||||||| |||| |||| ||||    
T  51888110 ttaatagcatgcaatggcaaaacgcctacaaataatatgataaaatctaaatcaccagaatactcat 51888176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 54022069 - 54021968
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||||||||||||| |||| || |||||||||||||||| |||||||| | ||| |||||| |||  || ||| |||||||| |||| |  |||||||    
T  54022069 ttaataacatacaacgacaaa-tgtctacaaataatatgataaaatctaagtcaccgaaatatccatgttttcggatctgcaacgttgacatccaaatca 54021971  T
Q  101 ttg 103  Q
    |||    
T  54021970 ttg 54021968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 9714120 - 9714071
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaa 50  Q
    |||| ||||||||| | |||||||||||||||||||||||| ||||||||    
T  9714120 ttaacaacatacaatgacaaaatgcctacaaataatatgataaaatctaa 9714071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 9178563 - 9178523
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgat 41  Q
    |||||| ||||||||| ||||||||||||||||||||||||    
T  9178563 ttaatagcatacaacgacaaaatgcctacaaataatatgat 9178523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 32766724 - 32766636
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| ||||||||| || ||||||||||||||||||||| |||  ||| | ||| |||||  |||  |||||| |||||||||||||    
T  32766724 ttaatagcatacaacgacataatgcctacaaataatatgataaaacttaagtcaccgaaatacccatgtttccggatctgcaacattga 32766636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 48257531 - 48257571
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgat 41  Q
    |||||| |||||||||||||||| |||||||||||||||||    
T  48257531 ttaatagcatacaacggcaaaatacctacaaataatatgat 48257571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 55228181 - 55228137
Alignment:
Q  8 catacaacggcaaaatgcctacaaataatatgatcaaatctaaat 52  Q
    ||||||||| ||||||| |||||||||||||||| ||||||||||    
T  55228181 catacaacgacaaaatgtctacaaataatatgattaaatctaaat 55228137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 7008888 - 7008939
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaat 52  Q
    |||||| ||||||||||||||||| | |||||||||||||| |||| |||||    
T  7008888 ttaatagcatacaacggcaaaatgtccacaaataatatgataaaatttaaat 7008939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 42032428 - 42032479
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaat 52  Q
    |||||| ||||||||||||||||| |||| ||||||||||| | ||||||||    
T  42032428 ttaatagcatacaacggcaaaatggctaccaataatatgataacatctaaat 42032479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 43853653 - 43853602
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaat 52  Q
    |||||||||||||||  ||||||||  |||||||||||||| ||||||||||    
T  43853653 ttaataacatacaacaacaaaatgctgacaaataatatgataaaatctaaat 43853602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 53444328 - 53444189
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||| ||||| |||||  |||||||||||||||| ||| |||| | ||| ||||   ||| ||||||| ||| |||||||||  | |||||||    
T  53444328 ttaatagcataaaacggaaaaatatctacaaataatatgataaaacctaagtcaccgaaattcacatgcttccggatcttcaacattgacgcccaaatca 53444229  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || || ||| ||||||||| || | ||||||||||    
T  53444228 ttggttgaatttgtaattgactgatgccgatctttcaata 53444189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 2069480 - 2069621
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    ||||||||||| ||||| ||||||| ||||||||||||||| |||| ||||| |||| ||||  ||| ||||    | |||||| |||| || ||||| |    
T  2069480 ttaataacata-aacggtaaaatgcatacaaataatatgataaaatataaatcaccataatacccatgcttctaaatttgcaacgttgacacccaaataa 2069578  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaatatga 143  Q
    |||  || |||| ||||||||| || ||| | |||||||||||    
T  2069579 ttgattgaatctatgattgactaaaactgatatttcaatatga 2069621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 143
Target Start/End: Complemental strand, 9643562 - 9643456
Alignment:
Q  37 atgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatcattgtgtggatctgtgattgactgaagctggtctttc 136  Q
    ||||| |||| ||||| |||| |||| |||||||||||| |||  |||||||||   |||||||||   || || ||||||||||||||| || |||||     
T  9643562 atgataaaatttaaatcaccagaatactcatacttccggatctataacattgatgttcaaatcattaattgaatatgtgattgactgaagttgatctttt 9643463  T
Q  137 aatatga 143  Q
    |||||||    
T  9643462 aatatga 9643456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 12 - 50
Target Start/End: Original strand, 24098977 - 24099015
Alignment:
Q  12 caacggcaaaatgcctacaaataatatgatcaaatctaa 50  Q
    |||||||||||||||||||||||||||||| ||| ||||    
T  24098977 caacggcaaaatgcctacaaataatatgataaaacctaa 24099015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 208 - 290
Target Start/End: Complemental strand, 51682475 - 51682394
Alignment:
Q  208 tgagaatggtgagaatgaattacaatcataagattaaaataaagggataggatgaaaacatcacttaagttagtcatgtgcca 290  Q
    ||||||| |||||||  |||||||| ||| |||||||||  || ||||| ||| ||||||| ||| |||||||||||||||||    
T  51682475 tgagaattgtgagaaa-aattacaaccattagattaaaagcaatggataagattaaaacataactgaagttagtcatgtgcca 51682394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 143
Target Start/End: Original strand, 12199593 - 12199734
Alignment:
Q  2 taataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatcat 101  Q
    |||||||||||||| | ||||| ||||||||||||||||| || ||||| |  |||||||  |||| ||||||  |||| ||| | ||  | |||||| |    
T  12199593 taataacatacaacagtaaaatacctacaaataatatgataaattctaagtcgccaaaattctcatgcttccgaatctgtaacgtcgacgctcaaatctt 12199692  T
Q  102 tgtgtggatctgtgattgactgaagctggtctttcaatatga 143  Q
    ||  || |||||| | ||||||||| || | |||||||||||    
T  12199693 tgattgaatctgtaactgactgaagttgatatttcaatatga 12199734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 35348517 - 35348468
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaa 50  Q
    |||||| |||| || |||||||||||||||||||||||||| ||| ||||    
T  35348517 ttaatagcataaaatggcaaaatgcctacaaataatatgataaaacctaa 35348468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 41
Target Start/End: Original strand, 4142659 - 4142691
Alignment:
Q  9 atacaacggcaaaatgcctacaaataatatgat 41  Q
    |||||||||||||||| ||||||||||||||||    
T  4142659 atacaacggcaaaatgtctacaaataatatgat 4142691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 11299909 - 11299949
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgat 41  Q
    ||||||||||| |||| |||||||||||| |||||||||||    
T  11299909 ttaataacataaaacgccaaaatgcctacgaataatatgat 11299949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 13634325 - 13634237
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| ||||||||||||||||  |||||||||||| ||| ||| |||||| ||  |||||  |||  |||||| |||||||| ||||    
T  13634325 ttaatagcatacaacggcaaaataactacaaataataagataaaacctaaatcactgaaatacccatgtttccggatctgcaacgttga 13634237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 17949223 - 17949311
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    ||||||||||||||   |||||||| |||| |||||||||| ||| |||| | | |||||||  ||| ||||||| |||||||| ||||    
T  17949223 ttaataacatacaagaacaaaatgcatacatataatatgataaaacctaagtcatcaaaatacccattcttccggatctgcaacgttga 17949311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 17953075 - 17953163
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    ||||||||||||||   |||||||| |||| |||||||||| ||| |||| | | |||||||  ||| ||||||| |||||||| ||||    
T  17953075 ttaataacatacaagaacaaaatgcatacatataatatgataaaacctaagtcatcaaaatacccattcttccggatctgcaacgttga 17953163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 22806746 - 22806706
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgat 41  Q
    |||||||||||||||  |||||||| |||||||||||||||    
T  22806746 ttaataacatacaacaacaaaatgcttacaaataatatgat 22806706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 33921244 - 33921176
Alignment:
Q  21 aatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    ||||||||||||||||||||| |||||||| | ||  |||||  ||| ||||||| |||||||| ||||    
T  33921244 aatgcctacaaataatatgataaaatctaagtcactgaaatacccatgcttccggatctgcaacgttga 33921176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 5e-23; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 28540805 - 28540944
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||||||||| |||||| |||||||||||||||| |||||||||| |||||||||  ||| |||| || |||||||| ||||  | |||||||    
T  28540805 ttaatagcatacaacggaaaaatgtctacaaataatatgatgaaatctaaatcaccaaaatacccatgcttctggatctgcaacgttgacgcccaaatca 28540904  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || || |||||||| ||||||||  ||||||||||    
T  28540905 ttgattgaatttgtgattgtctgaagctaatctttcaata 28540944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 8088111 - 8088253
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||| ||||||||||||||||||||||||||  ||||||||| |||| |||| || |  ||  || |||||||| ||||    |||||||    
T  8088111 ttaatagcatacaaaggcaaaatgcctacaaataatatgatataatctaaatcaccagaatactcttgtttttggatctgcaacgttgacgtccaaatca 8088210  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaatatga 143  Q
    |||  || ||||||||||||||||||||| |||||||||||||    
T  8088211 ttgattgaatctgtgattgactgaagctgatctttcaatatga 8088253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 14211416 - 14211277
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||||||| | ||||||||||||||||||||||| |||||||||| |||| ||||  ||| |||| || |||||||| ||||    |||||||    
T  14211416 ttaatagcatacaacagaaaaatgcctacaaataatatgatgaaatctaaatcaccagaatacccatgcttctggatctgcaacgttgacgtccaaatca 14211317  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || || |||||||| ||||||||| ||||||||||    
T  14211316 ttgattgcatttgtgattgtctgaagctgatctttcaata 14211277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 2979205 - 2979344
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||||||||||| ||||||||||||||||||||| |||||||||| |||| ||||  | | |||| || |||||||| ||||  | |||||||    
T  2979205 ttaatagcatacaacggcacaatgcctacaaataatatgatgaaatctaaatcaccagaatacccgtgcttctggatctgcaacgttgacgcccaaatca 2979304  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || || |||||||| |||||| || ||||| ||||    
T  2979305 ttgattgaatttgtgattgtctgaagttgatcttttaata 2979344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 124
Target Start/End: Complemental strand, 7930358 - 7930243
Alignment:
Q  9 atacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatcattgtgtgg 108  Q
    |||||||| |||||||||||||||||||||||| ||| ||||  |||| ||||| |||| ||||||| |||||||||||||  | ||||||||||  ||     
T  7930358 atacaacgacaaaatgcctacaaataatatgataaaacctaagaaacctaaatactcatgcttccggatctgcaacattgacgctcaaatcattggttga 7930259  T
Q  109 atctgtgattgactga 124  Q
    || ||| |||||||||    
T  7930258 atttgtaattgactga 7930243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 19103366 - 19103493
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||||||||| |||||||||| |||||||||||| |||||||||| |||  |||| |||| |||| || ||||||| |||||  | |||||||    
T  19103366 ttaatagcatacaacggaaaaatgcctataaataatatgatgaaatctaaatcaccggaatactcatgcttctggatctgcaatattgacgcccaaatca 19103465  T
Q  101 ttgtgtggatctgtgattgactgaagct 128  Q
    |||  || || |||||||| ||||||||    
T  19103466 ttgattgaatttgtgattgtctgaagct 19103493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 39567458 - 39567321
Alignment:
Q  2 taataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatcat 101  Q
    ||||||||||||||| ||||||| |||||||||||||||| |||||||||| |||| ||||  |||  ||| || |||||||  ||||    ||||||||    
T  39567458 taataacatacaacgacaaaatgtctacaaataatatgatgaaatctaaatcaccagaatacccatgtttctggatctgcaatgttgacgtccaaatcat 39567359  T
Q  102 tgtgtggatctgtgattgactgaagctggtctttcaat 139  Q
    ||  || || |||||||| ||||||||| |||||||||    
T  39567358 tgattgaatttgtgattgtctgaagctgatctttcaat 39567321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 24229683 - 24229771
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| |||||||||||||||||||||||||||||||||| ||| |||| | ||  |||||| ||| || |||| |||||||||||||    
T  24229683 ttaatagcatacaacggcaaaatgcctacaaataatatgataaaacctaagtcacagaaatatccatgctaccggatctgcaacattga 24229771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 13 - 140
Target Start/End: Original strand, 14726372 - 14726499
Alignment:
Q  13 aacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatcattgtgtggatct 112  Q
    |||| |||||||||||||||||||||||| ||| |||| | ||||||||   ||| ||||||| ||| |||| |||| || ||||||||||  || || |    
T  14726372 aacgacaaaatgcctacaaataatatgataaaacctaagtcaccaaaattcacatgcttccggatcttcaacgttgacacccaaatcattggttgaattt 14726471  T
Q  113 gtgattgactgaagctggtctttcaata 140  Q
    |||||||||||| || | ||||||||||    
T  14726472 gtgattgactgatgccgatctttcaata 14726499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 13007418 - 13007330
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| |||||||||||||||||||||||||||||||||| |||  ||| | ||| |||||  ||| ||||||| |||||||| ||||    
T  13007418 ttaatagcatacaacggcaaaatgcctacaaataatatgataaaacttaagtcaccgaaatacccatgcttccggatctgcaacgttga 13007330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 35920895 - 35921019
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||| | |||||||||||||||||||||||| ||||| |||| || | |||||  || ||||||| |||||||| ||||    |||||||    
T  35920895 ttaatagcatacaatgacaaaatgcctacaaataatatgataaaatcaaaatcactagaatatcgatgcttccggatctgcaacgttgacgttcaaatca 35920994  T
Q  101 ttgtgtggatctgtgattgactgaa 125  Q
    |||  || |||||||||||| ||||    
T  35920995 ttgattgaatctgtgattgattgaa 35921019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 38597986 - 38597898
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| |||||||||||||||||||||||||||||||||| ||| |||| | ||  |||||  ||| ||||||| |||||||| ||||    
T  38597986 ttaatagcatacaacggcaaaatgcctacaaataatatgataaaacctaagtcactgaaatacccatgcttccggatctgcaacgttga 38597898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 31391652 - 31391791
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||||||| | |||||||||||| |||||||||| ||| |||| | ||| ||||| |||| |||| || |||||||| ||||  | |||||||    
T  31391652 ttaatagcatacaacagaaaaatgcctacatataatatgataaaacctaagtcaccgaaatactcatccttctggatctgcaacgttgacgcccaaatca 31391751  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || || ||| ||||||||| || | ||||||||||    
T  31391752 ttggttgaatttgtaattgactgatgccgatctttcaata 31391791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 1409687 - 1409585
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| | ||||||||||||||  || ||||||||||||| |||||||| | || |||||||||||  || ||| |||||||||||||  || ||||||    
T  1409687 ttaatagcgtacaacggcaaaatatcttcaaataatatgattaaatctaagtcactaaaatattcatgttttcggatctgcaacattgacgcataaatca 1409588  T
Q  101 ttg 103  Q
    |||    
T  1409587 ttg 1409585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 10722950 - 10722901
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaa 50  Q
    ||||||||||||| ||| ||||||||||||||||||||||| ||||||||    
T  10722950 ttaataacatacagcggaaaaatgcctacaaataatatgataaaatctaa 10722901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 275
Target Start/End: Original strand, 34607113 - 34607182
Alignment:
Q  206 tatgagaatggtgagaatgaattacaatcataagattaaaataaagggataggatgaaaacatcacttaa 275  Q
    |||||||||| |||||||||||||||  ||| | ||||||||||||||||  ||| ||||||||||||||    
T  34607113 tatgagaatgatgagaatgaattacagccatcaaattaaaataaagggatgagattaaaacatcacttaa 34607182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 9113624 - 9113712
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| |||||||||| ||||||||||||||||||||||| |||  ||| | ||| ||||||  || ||||||| |||||||| ||||    
T  9113624 ttaatagcatacaacggaaaaatgcctacaaataatatgataaaacttaagtcaccgaaatatctatgcttccggatctgcaacgttga 9113712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 26825619 - 26825579
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgat 41  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  26825619 ttaatagcatacaacggcaaaatgcctacaaataatatgat 26825579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 14082295 - 14082414
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||| |||||||||||||||||||||||| ||| |||| | |   |||||  ||| ||||||| |||||||| ||||| | ||||||     
T  14082295 ttaatagcatacaacgacaaaatgcctacaaataatatgataaaacctaagtcattgaaatacccatgcttccggatctgcaacgttgatgcccaaatct 14082394  T
Q  101 ttgtgtggatctgtgattga 120  Q
    |||  ||||| ||| |||||    
T  14082395 ttggttggatttgtaattga 14082414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 26878015 - 26878089
Alignment:
Q  9 atacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaa 83  Q
    |||||||| |||| ||||||||||||||||||| |||||||| | |||||||||  ||| |||| || |||||||    
T  26878015 atacaacgacaaagtgcctacaaataatatgataaaatctaagtcaccaaaatacccatgcttctggatctgcaa 26878089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 11976834 - 11976883
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaa 50  Q
    ||||||||||| ||||| ||||||||||||||||||||||| ||| ||||    
T  11976834 ttaataacataaaacgggaaaatgcctacaaataatatgataaaacctaa 11976883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 41630691 - 41630642
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaa 50  Q
    |||||| ||||||||| ||||||| |||||||||||||||| ||||||||    
T  41630691 ttaatagcatacaacgacaaaatgtctacaaataatatgataaaatctaa 41630642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 25980346 - 25980306
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgat 41  Q
    |||||| |||| |||||||||||||||||||||||||||||    
T  25980346 ttaatagcatataacggcaaaatgcctacaaataatatgat 25980306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 34945582 - 34945494
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| ||||||||| ||||||||||| |||||||||||| |||  ||| | ||| |||||  ||| ||||||| |||||||| ||||    
T  34945582 ttaatagcatacaacgacaaaatgcctataaataatatgataaaacttaagtcaccgaaatacccatgcttccggatctgcaacgttga 34945494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 8096397 - 8096448
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaat 52  Q
    |||||| |||| || |||||||||||||||||||||||||| ||| ||||||    
T  8096397 ttaatagcataaaatggcaaaatgcctacaaataatatgataaaacctaaat 8096448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 13422122 - 13421999
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||| ||||| |||||||||||| |||||||||| |||| ||| | ||| |||||  ||| |||| |  |||||||||||||  | |||||||    
T  13422122 ttaatagcataaaacggaaaaatgcctacatataatatgataaaatataagtcaccgaaatacacatgcttcagaatctgcaacattgacgcccaaatca 13422023  T
Q  101 ttgtgtggatctgtgattgactga 124  Q
    |||  || || ||| |||||||||    
T  13422022 ttgattgaatttgtaattgactga 13421999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 35850988 - 35850849
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||| ||||||||| ||||| ||||||||||||| ||| |||| | ||| ||||   ||| |||| || ||| |||| ||||  |||||||||    
T  35850988 ttaatagcataaaacggcaaagtgcctgcaaataatatgataaaacctaagtcaccgaaattcacatgcttctggatcttcaacgttgacgcacaaatca 35850889  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || || ||| ||||||||| || | ||||||||||    
T  35850888 ttggttgaatttgtaattgactgatgccgatctttcaata 35850849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 11867838 - 11867784
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataac 55  Q
    |||||| ||||||||  ||||||||||||||||||||| || |||||||| ||||    
T  11867838 ttaatagcatacaacaacaaaatgcctacaaataatataataaaatctaagtaac 11867784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 208 - 290
Target Start/End: Original strand, 36258279 - 36258361
Alignment:
Q  208 tgagaatggtgagaatgaattacaatcataagattaaaataaagggataggatgaaaacatcacttaagttagtcatgtgcca 290  Q
    |||||||||||||||| |||||||| | | |||||||||  || || || ||| |||| ||||||||||| | ||||||||||    
T  36258279 tgagaatggtgagaataaattacaaccgtcagattaaaagtaatgggtaagattaaaatatcacttaagtgactcatgtgcca 36258361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 6012037 - 6012081
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaa 45  Q
    |||||| |||| ||||| | |||||||||||||||||||||||||    
T  6012037 ttaatagcataaaacggtagaatgcctacaaataatatgatcaaa 6012081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 10332446 - 10332530
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatct-aaataaccaaaatattcatacttccgggtctgcaac 84  Q
    |||||| |||| || | ||||||||||||||| |||||||| |||||| |||| | || |||| |||| ||||||| ||||||||    
T  10332446 ttaatagcatataaagacaaaatgcctacaaaaaatatgatgaaatctaaaatcatcagaatactcatgcttccggatctgcaac 10332530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 11192568 - 11192532
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataata 37  Q
    |||||||||||||||| |||||||| |||||||||||    
T  11192568 ttaataacatacaacgacaaaatgcttacaaataata 11192532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 5e-23; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 32448516 - 32448661
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgat---caaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaa 97  Q
    |||||| ||||||||||||||||||||||||||||||||||     ||||||||| |||| |||| || | |||| || |||||||| ||||    ||||    
T  32448516 ttaatagcatacaacggcaaaatgcctacaaataatatgatataataatctaaatcaccagaatactcttgcttctggatctgcaacgttgacgtccaaa 32448615  T
Q  98 tcattgtgtggatctgtgattgactgaagctggtctttcaatatga 143  Q
    ||||||  || ||||||||||||||||||||| |||||||||||||    
T  32448616 tcattgattgaatctgtgattgactgaagctgatctttcaatatga 32448661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 17249047 - 17249189
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||||||||||| ||||||||||||||||  ||||||||| |||| |||| || | |||  || |||||||| ||||    |||||||    
T  17249047 ttaatagcatacaacggcaaaatgtctacaaataatatgatataatctaaatcaccagaatactcttgcttatggatctgcaacgttgacgtccaaatca 17249146  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaatatga 143  Q
    |||  || ||||||||||||||||| ||| |||||||||||||    
T  17249147 ttgattgaatctgtgattgactgaaactgatctttcaatatga 17249189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 10237116 - 10237255
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||| |||||||||||||||||||||||| |||||||||| | || ||||  ||| |||| || |||||||| ||||    |||||||    
T  10237116 ttaatagcatacaacgacaaaatgcctacaaataatatgatgaaatctaaatcatcagaatacccatgcttctggatctgcaacgttgacgtccaaatca 10237215  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || || |||||||| ||||||||| ||||||||||    
T  10237216 ttgattgaatttgtgattgtctgaagctgatctttcaata 10237255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 10929865 - 10929723
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||| ||||  ||||||||||| |||||||||||| |||| ||||| |||| ||||  ||| ||||||| |||||||| |||||   |||||||    
T  10929865 ttaatagcattcaacaacaaaatgcctataaataatatgataaaatttaaatcaccagaatacacatgcttccggatctgcaacgttgatgtccaaatca 10929766  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaatatga 143  Q
    |||  || ||||||||||||||||||||| | |||||| ||||    
T  10929765 ttgattgaatctgtgattgactgaagctgatttttcaacatga 10929723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 29574528 - 29574670
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||| || | ||||||| ||||||| |||||||| |||||||||| | || ||||||||| ||||||| |||||||| |||     |||||||    
T  29574528 ttaatagcatataatgacaaaatgactacaaaaaatatgatgaaatctaaatcatcataatattcatgcttccggatctgcaacgttggcgtccaaatca 29574627  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaatatga 143  Q
    |||  || ||||||||||||||||||||  |||||||||||||    
T  29574628 ttgattgaatctgtgattgactgaagctaatctttcaatatga 29574670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 17 - 143
Target Start/End: Original strand, 12647028 - 12647151
Alignment:
Q  17 gcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatcattgtgtggatctgtga 116  Q
    |||||||||||||||| |||||||   ||||||||| |||||||||||||| ||||||| ||| ||||||||     ||||| || |  || ||||||||    
T  12647028 gcaaaatgcctacaaaaaatatga---aatctaaatcaccaaaatattcatgcttccggatctacaacattggcgtccaaatgatcgattgaatctgtga 12647124  T
Q  117 ttgactgaagctggtctttcaatatga 143  Q
    ||||||||||||| |||||||||||||    
T  12647125 ttgactgaagctgatctttcaatatga 12647151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 29279470 - 29279572
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||| ||||||||||||||||||||||||||||| |||| ||| | ||| ||| | ||||  |||||| |||||||||||||  |||||||||    
T  29279470 ttaatagcataaaacggcaaaatgcctacaaataatatgataaaatttaagtcaccgaaaaactcatgtttccggatctgcaacattgacgcacaaatca 29279569  T
Q  101 ttg 103  Q
    |||    
T  29279570 ttg 29279572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 37416910 - 37416768
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||| ||||||||||||||||||| |||||||||||||||| |||| ||||| || | ||||  ||| |||||||| ||||||  |||| |  |||||||    
T  37416910 ttaacaacatacaacggcaaaatgtctacaaataatatgataaaatataaatcactagaatacacatgcttccgggcctgcaatgttgacatccaaatca 37416811  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaatatga 143  Q
    |||  || ||||||||||||||  || || | |||||||||||    
T  37416810 ttgattgaatctgtgattgactcgagttgatatttcaatatga 37416768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 41694821 - 41694684
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    ||||||||||| |||| ||||||||||| |||||||||||| |||||||| | |||| ||| | ||| |||| |  |||||||| ||||| | |||||||    
T  41694821 ttaataacatataacgacaaaatgcctataaataatatgataaaatctaagtcaccagaatctacatgcttctgcatctgcaacgttgatgcccaaatca 41694722  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaa 138  Q
    |||  || || ||| |||| ||||||||| ||||||||    
T  41694721 ttgattgaatatgtaattggctgaagctgatctttcaa 41694684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 1421876 - 1421788
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| ||||||||| |||||||||||||||||||||||| ||| |||||| ||| |||||  ||| ||||||| |||||||| ||||    
T  1421876 ttaatagcatacaacgacaaaatgcctacaaataatatgataaaacctaaatcaccgaaatacccatgcttccggatctgcaacgttga 1421788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 4778953 - 4778865
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    ||||||||||||||||||||||||||||||||||||||||| |||  ||| | ||| |||||  ||| ||||||| |||||||| ||||    
T  4778953 ttaataacatacaacggcaaaatgcctacaaataatatgataaaacttaagtcaccgaaatacccatgcttccggatctgcaacgttga 4778865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 4904045 - 4904145
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||| ||||||| |||||||||||||||| |||||||| | ||| |||||| ||| |||| || |||||||| |||| || |||||||    
T  4904045 ttaatagcatacaacgacaaaatgtctacaaataatatgataaaatctaagtcaccgaaatatccatgcttctggatctgcaacgttgacacccaaatca 4904144  T
Q  101 t 101  Q
    |    
T  4904145 t 4904145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 7646678 - 7646590
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| |||||||||||||||||||||||||||||||||| |||  ||| | ||| ||||| |||| ||||||| |||||||| ||||    
T  7646678 ttaatagcatacaacggcaaaatgcctacaaataatatgataaaacttaagtcaccgaaatactcatgcttccggatctgcaacgttga 7646590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 3309145 - 3309006
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||||||||||| |||||||||||||||| |||| ||||| |||| ||||  ||| |||| || |||||||| || |  | |||||||    
T  3309145 ttaatagcatacaacggcaaaatgactacaaataatatgatgaaatataaatcaccagaatacccatgcttctggatctgcaacgttaacgcccaaatca 3309046  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || || |||||||| |||||| || | ||||||||    
T  3309045 ttgattgaatttgtgattgtctgaagttgatatttcaata 3309006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 37994484 - 37994401
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaac 84  Q
    |||||| |||| ||| ||||||||||||||||||||||||| |||||||||| |||  ||||||| | ||||||| ||||||||    
T  37994484 ttaatagcatataacagcaaaatgcctacaaataatatgataaaatctaaatcaccggaatattctttcttccggatctgcaac 37994401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 25508968 - 25509017
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaa 50  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  25508968 ttaataacatacaacggcaaaatgcctacaaataatacgataaaatctaa 25509017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 33585635 - 33585723
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| |||||||||||||||||| ||||||||||||||| |||  ||||| ||| || || |||| ||||||| |||||||| ||||    
T  33585635 ttaatagcatacaacggcaaaatgcatacaaataatatgataaaacttaaatcaccgaattactcatgcttccggatctgcaacgttga 33585723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 19595804 - 19595875
Alignment:
Q  2 taataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttcc 73  Q
    ||||| ||||||| |||||||| ||||||||||||||||| ||||| |||| | |||||||||||| |||||    
T  19595804 taatagcatacaaaggcaaaatacctacaaataatatgataaaatcaaaatcatcaaaatattcatgcttcc 19595875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 23933519 - 23933658
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| | |||||||||||||| ||||||||||||||||| |||||||||| |||| | ||| ||| ||||| | | || ||| ||||    ||||| |    
T  23933519 ttaatagcttacaacggcaaaattcctacaaataatatgataaaatctaaatcaccagattatccatgcttccagatatgtaacgttgacgtccaaataa 23933618  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || |||||||||||||||||| ||  |||||||||    
T  23933619 ttgattgaatctgtgattgactgaagttgaactttcaata 23933658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 37876506 - 37876629
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||| |||||||||||||||||||||||||||| |||| ||| | ||| |||||  ||| ||| ||| |||||||| ||||| | ||| |||    
T  37876506 ttaatagcatacgacggcaaaatgcctacaaataatatgataaaatttaagtcaccgaaatacccatgctttcggatctgcaacgttgatgcccaagtca 37876605  T
Q  101 ttgtgtggatctgtgattgactga 124  Q
    |||  || || ||| |||||||||    
T  37876606 ttggttgaatttgtaattgactga 37876629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 30399929 - 30400074
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataacca------aaatattcatacttccgggtctgcaacattgatacac 94  Q
    ||||| |||||| |||||||||||||||||||||||||||| |||||||| | || |      ||||| |||| ||| ||| |||||||| ||||  | |    
T  30399929 ttaatgacatacgacggcaaaatgcctacaaataatatgataaaatctaagtcactaaaaatcaaatactcatgctttcggatctgcaacgttgacgccc 30400028  T
Q  95 aaatcattgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||||||||  || || ||| ||||||||||| || ||||||||||    
T  30400029 aaatcattgattgaatttgtaattgactgaagttgatctttcaata 30400074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 4100536 - 4100496
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgat 41  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  4100536 ttaatatcatacaacggcaaaatgcctacaaataatatgat 4100496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9169158 - 9169198
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgat 41  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  9169158 ttaatagcatacaacggcaaaatgcctacaaataatatgat 9169198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 31128692 - 31128768
Alignment:
Q  13 aacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    ||||||||||||||||||||||||||||| |||| ||| | ||  ||||| |||| ||||||| |||||||| ||||    
T  31128692 aacggcaaaatgcctacaaataatatgataaaatataagtcactgaaatactcatgcttccggatctgcaacgttga 31128768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 31788656 - 31788568
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| |||||||||||||||||||||||||||||||| | ||| |||| | ||  ||||| |||| ||| ||| |||||||| ||||    
T  31788656 ttaatagcatacaacggcaaaatgcctacaaataatatgttaaaacctaagtcactgaaatactcatgctttcggatctgcaacgttga 31788568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 36692074 - 36692014
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaat 61  Q
    |||||| |||| ||||||||||||||||||||||||||||| ||| |||||| ||| ||||    
T  36692074 ttaatagcataaaacggcaaaatgcctacaaataatatgataaaacctaaatcaccgaaat 36692014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 38445366 - 38445326
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgat 41  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  38445366 ttaataacatacaatggcaaaatgcctacaaataatatgat 38445326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 7677773 - 7677875
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||||||||||||||| |||||||||||| ||| |||| | ||  |||||  ||| ||| ||| |||||||| |||||   |||||||    
T  7677773 ttaatagcatacaacggcaaaatgcctaaaaataatatgataaaacctaattcacggaaatacccatgctttcggatctgcaacgttgatgtccaaatca 7677872  T
Q  101 ttg 103  Q
    |||    
T  7677873 ttg 7677875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 11985141 - 11985235
Alignment:
Q  9 atacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatcattg 103  Q
    ||||||| ||||||||||||||||||||||||| ||| |||| | ||  ||||| |||| |||| || |||||||| |||| ||  |||||||||    
T  11985141 atacaacagcaaaatgcctacaaataatatgataaaacctaagtcactgaaatactcattcttctggatctgcaacgttgacacctaaatcattg 11985235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 12554081 - 12554223
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||| |||||||||||||||||||||||| ||| |||| | ||  ||||| |||| |||||   | |||||  |  | || |||||||    
T  12554081 ttaatatcatacaacgacaaaatgcctacaaataatatgataaaacctaagttactgaaatactcatgcttccaaatatgcaatgtccacacccaaatca 12554180  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaatatga 143  Q
    |||  || |||||| ||||||||||| || | |||||||||||    
T  12554181 ttgattgaatctgtaattgactgaagttgatatttcaatatga 12554223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 6358781 - 6358842
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaata 62  Q
    |||||| ||||||||| |||||| | ||||||||||||||| |||||||||| |||| ||||    
T  6358781 ttaatagcatacaacgacaaaatacgtacaaataatatgataaaatctaaatcaccataata 6358842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 14423517 - 14423464
Alignment:
Q  9 atacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaata 62  Q
    |||||||||||||||||||| | |||||||||| |||||||| ||||| |||||    
T  14423517 atacaacggcaaaatgcctaaatataatatgataaaatctaactaacctaaata 14423464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 18763668 - 18763619
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaa 50  Q
    |||||| |||| ||||||||||||||||||||||||||||| ||| ||||    
T  18763668 ttaatagcataaaacggcaaaatgcctacaaataatatgataaaacctaa 18763619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 19598039 - 19597984
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataacca 57  Q
    |||||| |||||||||| |||||| |||||||||||||||| |||||||||| ||||    
T  19598039 ttaatagcatacaacggtaaaatgtctacaaataatatgat-aaatctaaatcacca 19597984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 14955729 - 14955678
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaat 52  Q
    |||||||||||||| |  |||||| |||||||||||||||| ||||||||||    
T  14955729 ttaataacatacaatgataaaatgtctacaaataatatgataaaatctaaat 14955678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 17994636 - 17994675
Alignment:
Q  7 acatacaacggcaaaatgcctacaaataatatgatcaaat 46  Q
    |||||||| |||||||||||||||||||||||||| ||||    
T  17994636 acatacaatggcaaaatgcctacaaataatatgataaaat 17994675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 19028814 - 19028953
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||| ||||  |||||||||||||||| |||||| |||||||| | ||| |||||| ||| |||| || | |||||| ||||  | |||||||    
T  19028814 ttaatagcataaaacgaaaaaatgcctacaaatagtatgataaaatctaagttaccgaaatatccatgcttctggatttgcaacgttgacgctcaaatca 19028913  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || || |||  ||||||||||  | ||||||||||    
T  19028914 ttgattgaatttgtacttgactgaagtcgatctttcaata 19028953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 28533854 - 28533905
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaat 52  Q
    |||||| ||||||||| |||||| ||||||||||||||||| ||||| ||||    
T  28533854 ttaatagcatacaacgacaaaatacctacaaataatatgataaaatccaaat 28533905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 31210521 - 31210568
Alignment:
Q  15 cggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaata 62  Q
    ||||||||||||||||||||||||||| ||| |||||| ||| |||||    
T  31210521 cggcaaaatgcctacaaataatatgataaaacctaaatcaccgaaata 31210568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 33140625 - 33140582
Alignment:
Q  3 aataacatacaacggcaaaatgcctacaaataatatgatcaaat 46  Q
    |||||||||||||  |||||||||||||||||||||||| ||||    
T  33140625 aataacatacaaccacaaaatgcctacaaataatatgattaaat 33140582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 42577308 - 42577245
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatatt 64  Q
    |||||| |||| |||| |||||| ||||||||||||||||||||||| || | ||| |||||||    
T  42577308 ttaatagcataaaacgacaaaatacctacaaataatatgatcaaatcaaagtgaccgaaatatt 42577245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 5427769 - 5427871
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||||||||  ||||||| | ||||||||||||| ||| |||| | ||  |||||  ||||||||||| |||||||| ||||  ||||| |||    
T  5427769 ttaatagcatacaacgataaaatgcttgcaaataatatgataaaacctaagtcactgaaatacacatacttccggatctgcaacgttgacgcacaagtca 5427868  T
Q  101 ttg 103  Q
    |||    
T  5427869 ttg 5427871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 18107650 - 18107699
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaa 50  Q
    ||||||| ||| |||| |||||||||||||||||||||||| || |||||    
T  18107650 ttaataatataaaacgacaaaatgcctacaaataatatgattaattctaa 18107699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 43397018 - 43397067
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaa 50  Q
    |||||| |||| ||||||||||||| ||||||||||||||| ||| ||||    
T  43397018 ttaatagcataaaacggcaaaatgcgtacaaataatatgataaaacctaa 43397067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 4264664 - 4264632
Alignment:
Q  9 atacaacggcaaaatgcctacaaataatatgat 41  Q
    |||||||| ||||||||||||||||||||||||    
T  4264664 atacaacgacaaaatgcctacaaataatatgat 4264632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 19062247 - 19062279
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaat 33  Q
    |||||| ||||||||||||||||||||||||||    
T  19062247 ttaatagcatacaacggcaaaatgcctacaaat 19062279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 41
Target Start/End: Original strand, 27097315 - 27097347
Alignment:
Q  9 atacaacggcaaaatgcctacaaataatatgat 41  Q
    ||||||||||||||| |||||||||||||||||    
T  27097315 atacaacggcaaaattcctacaaataatatgat 27097347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 33760093 - 33760133
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgat 41  Q
    |||||| | |||||| |||||||||||||||||||||||||    
T  33760093 ttaatagcttacaacagcaaaatgcctacaaataatatgat 33760133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 41327939 - 41327899
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgat 41  Q
    |||||| ||||||| | ||||||||||||||||||||||||    
T  41327939 ttaatagcatacaatgccaaaatgcctacaaataatatgat 41327899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 6203 - 6095
Alignment:
Q  18 caaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatcattgtgtggatctgtgat 117  Q
    ||||||| |||||||||||||||| |||||||||| |||| ||||  ||| ||||||| ||||||||||||| |  ||||||||||  || || ||||||    
T  6203 caaaatgtctacaaataatatgataaaatctaaatcaccagaatacacatgcttccggatctgcaacattgacatccaaatcattgattgaatatgtgat 6104  T
Q  118 tgactgaag 126  Q
    |||||||||    
T  6103 tgactgaag 6095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 1577 - 1716
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||| ||||  ||||||||||||||||||||||| |||||||||| |||| ||||  |||  ||| || ||| | || ||||||| |||||||    
T  1577 ttaatagcatataacgataaaatgcctacaaataatatgataaaatctaaatcaccagaatacccatgtttctggatctactacgttgatacccaaatca 1676  T
Q  101 ttgtgtggatctgtgattgactgaagctggtctttcaata 140  Q
    |||  || || |||||||| |||||| || ||||||||||    
T  1677 ttgattgaatttgtgattgtctgaagttgatctttcaata 1716  T

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Target: scaffold0127 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 15682 - 15600
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaa 83  Q
    |||||| |||| ||||||||||||||||||||||||||||| ||| |||| | ||| |||||| ||| ||||||| |||||||    
T  15682 ttaatagcatataacggcaaaatgcctacaaataatatgataaaacctaagtcaccgaaatatccatgcttccggatctgcaa 15600  T

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Target: scaffold0884 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 1872 - 1933
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaata 62  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||| |||||| ||| |||||    
T  1872 ttaataacatacaacagcaaaatgcctacaaataatatgataaaacctaaatcaccgaaata 1933  T

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Target: scaffold0088 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 50966 - 50878
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| ||||||| |||||||||||||||||||||||||| |||  ||| | ||| |||||| ||| ||||||| |||||||| ||||    
T  50966 ttaatagcatacaatggcaaaatgcctacaaataatatgataaaacttaagtcaccgaaatatccatgcttccggatctgcaacgttga 50878  T

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Target: scaffold0121 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 31184 - 31271
Alignment:
Q  12 caacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatc 99  Q
    ||||| ||||||||||| |||||||||||| |||||||| | ||| |||||  ||| ||||||| |||||||||||||| | ||||||    
T  31184 caacgacaaaatgcctataaataatatgataaaatctaagtcaccgaaatacccatgcttccggatctgcaacattgatgctcaaatc 31271  T

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Target: scaffold0050 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 65941 - 66064
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||| |||||||||||||||||||||||| |||  ||| | ||| |||||  ||| ||||||| |||||||| |||  || |||||||    
T  65941 ttaatagcatacaacgacaaaatgcctacaaataatatgataaaacataagtcaccgaaatacccatgcttccggatctgcaacgttggcacccaaatca 66040  T
Q  101 ttgtgtggatctgtgattgactga 124  Q
    |||  || || ||| |||||||||    
T  66041 ttggttgaatttgtaattgactga 66064  T

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Target: scaffold0049 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 71199 - 71301
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| ||||||||  ||||||||||||||||||||| || |||||||| | | |||||||  ||| ||||||| |||||||| |||| || | |||||    
T  71199 ttaatagcatacaacaacaaaatgcctacaaataatataataaaatctaagtcatcaaaatacccatgcttccggatctgcaacgttgacaccccaatca 71298  T
Q  101 ttg 103  Q
    |||    
T  71299 ttg 71301  T

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Target: scaffold0445 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 1534 - 1474
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaat 61  Q
    |||||| |||| ||||||||||||||||||||||||||||| ||| |||||| ||| ||||    
T  1534 ttaatagcataaaacggcaaaatgcctacaaataatatgataaaacctaaatcaccgaaat 1474  T

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Target: scaffold0026 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 71769 - 71809
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgat 41  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  71769 ttaatagcatacaacggcaaaatgcctacaaataatatgat 71809  T

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Target: scaffold0017 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 32654 - 32734
Alignment:
Q  9 atacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    ||||| || |||||||||||||||||||||||| |||||||| | ||| ||||| |||| ||||| | |||||||| ||||    
T  32654 atacagcgacaaaatgcctacaaataatatgataaaatctaagtcaccgaaatactcatgcttccagatctgcaacgttga 32734  T

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Target: scaffold0262 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 1725 - 1820
Alignment:
Q  8 catacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatcattg 103  Q
    |||||||||| ||||||||||||||||||||||| |||| ||| | | | |||||  ||| ||||||| |||||||| ||| | | ||||||||||    
T  1725 catacaacggtaaaatgcctacaaataatatgataaaatataagtcatcgaaatacccatgcttccggatctgcaacgttggtgcccaaatcattg 1820  T

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Target: scaffold0064 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 18989 - 19032
Alignment:
Q  9 atacaacggcaaaatgcctacaaataatatgatcaaatctaaat 52  Q
    ||||||||||||||||| ||||||||||||||| ||||| ||||    
T  18989 atacaacggcaaaatgcatacaaataatatgataaaatccaaat 19032  T

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Target: scaffold0021 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 4345 - 4274
Alignment:
Q  18 caaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    ||||||| |||||||||||||||| |||||||||| | ||||||| |||  ||| ||| |||||||| ||||    
T  4345 caaaatgtctacaaataatatgataaaatctaaatcatcaaaatactcaagctttcggatctgcaacgttga 4274  T

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Target: scaffold0634 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 8702 - 8600
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattgatacacaaatca 100  Q
    |||||| |||||||||||||||||||||| | ||||||||| |||  ||| | ||| |||||  ||| ||||| | |||||||| ||||  | |||||||    
T  8702 ttaatagcatacaacggcaaaatgcctacgattaatatgataaaacataattcaccgaaatacccattcttccagatctgcaacgttgacgcccaaatca 8603  T
Q  101 ttg 103  Q
    |||    
T  8602 ttg 8600  T

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Target: scaffold0603 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 7905 - 7865
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgat 41  Q
    ||||||||||||||  ||||||| |||||||||||||||||    
T  7905 ttaataacatacaatagcaaaatccctacaaataatatgat 7865  T

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Target: scaffold0039 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 93297 - 93209
Alignment:
Q  1 ttaataacatacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaatattcatacttccgggtctgcaacattga 89  Q
    |||||| || |||||  ||||||||||||||| |||||||| |||| ||||| |||| ||||  |||| ||| || |||||||| ||||    
T  93297 ttaatagcacacaacaacaaaatgcctacaaacaatatgataaaatttaaatcaccagaatacccatatttctggatctgcaacgttga 93209  T

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