View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18965_high_15 (Length: 250)
Name: NF18965_high_15
Description: NF18965
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18965_high_15 |
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Alignment Details
Target: chr3 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 34144843 - 34145089
Alignment:
| Q |
1 |
gaagatctgtaacatgcatgttcttaacattttgtttcaacactgaaaaggaaagtaaattattgaggaagatgttgaagtaccaaaacttggaaatctc |
100 |
Q |
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| T |
34144843 |
gaagatctgtaacatgcatgttcttaacattttgtttcaacactgaaaaggaaagtaaattattgaggaagatgttgaagtaccaaaacttggaaatctc |
34144942 |
T |
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| Q |
101 |
gttgataaagcatgaggttgtagaaagagttgggcgaggtagattttgttcgttgaaagtgatcaaagaatctacagtggtgagtacaagaactacacac |
200 |
Q |
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| T |
34144943 |
gttgataaagcatgaggttgtagaaagagttgggcgaggtagattttgttcgttgaaagtgatcaaagaatctacagtggtgagtacaagaactacacac |
34145042 |
T |
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| Q |
201 |
ttgtacttgttgattgcgaaacattgtactgttctccttctctctcg |
247 |
Q |
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|| ||||||||||||||||| ||||| |||||||| |||||||||| |
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| T |
34145043 |
ttttacttgttgattgcgaaccattgcactgttcttattctctctcg |
34145089 |
T |
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