View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1896_low_19 (Length: 259)

Name: NF1896_low_19
Description: NF1896
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1896_low_19
NF1896_low_19
[»] chr5 (40 HSPs)
chr5 (7-196)||(26319052-26319241)
chr5 (7-196)||(37094907-37095101)
chr5 (86-196)||(15799159-15799270)
chr5 (92-196)||(6156665-6156770)
chr5 (85-192)||(25746964-25747071)
chr5 (85-196)||(26190373-26190485)
chr5 (86-192)||(20891551-20891658)
chr5 (86-196)||(4064796-4064907)
chr5 (35-176)||(34440688-34440837)
chr5 (94-192)||(38871609-38871708)
chr5 (85-196)||(12465185-12465293)
chr5 (86-184)||(40620066-40620165)
chr5 (19-176)||(38640676-38640839)
chr5 (86-185)||(39524721-39524821)
chr5 (86-176)||(14111851-14111942)
chr5 (86-192)||(28083454-28083561)
chr5 (92-185)||(15957694-15957788)
chr5 (35-192)||(36359604-36359769)
chr5 (92-196)||(33487544-33487649)
chr5 (86-192)||(38372247-38372354)
chr5 (86-182)||(38692859-38692955)
chr5 (85-152)||(24203759-24203826)
chr5 (86-186)||(32842048-32842149)
chr5 (86-184)||(8032217-8032316)
chr5 (86-152)||(29862591-29862657)
chr5 (86-174)||(31221415-31221504)
chr5 (19-78)||(38640988-38641047)
chr5 (19-192)||(43388073-43388252)
chr5 (84-184)||(37183856-37183957)
chr5 (19-176)||(28445413-28445578)
chr5 (86-192)||(27212646-27212753)
chr5 (19-78)||(8739196-8739255)
chr5 (133-192)||(31929229-31929289)
chr5 (192-236)||(4064933-4064976)
chr5 (19-71)||(16429133-16429185)
chr5 (192-236)||(26318982-26319026)
chr5 (93-186)||(26095035-26095129)
chr5 (192-234)||(37095126-37095168)
chr5 (194-234)||(12464598-12464638)
chr5 (19-47)||(16429367-16429395)
[»] chr1 (45 HSPs)
chr1 (7-176)||(24471311-24471481)
chr1 (7-176)||(30829463-30829632)
chr1 (19-192)||(43319199-43319379)
chr1 (85-196)||(33611485-33611597)
chr1 (85-196)||(18583619-18583731)
chr1 (86-192)||(32817687-32817794)
chr1 (86-187)||(42545948-42546050)
chr1 (86-182)||(34162797-34162894)
chr1 (85-196)||(23442710-23442822)
chr1 (86-196)||(17000351-17000461)
chr1 (86-192)||(40650751-40650858)
chr1 (85-196)||(49786241-49786352)
chr1 (86-185)||(28866707-28866806)
chr1 (86-192)||(15069917-15070025)
chr1 (94-196)||(41584754-41584857)
chr1 (86-184)||(44573172-44573271)
chr1 (92-173)||(49677478-49677560)
chr1 (92-192)||(45046933-45047033)
chr1 (85-192)||(40908009-40908117)
chr1 (86-182)||(7011195-7011293)
chr1 (86-192)||(45567952-45568059)
chr1 (92-176)||(32542388-32542473)
chr1 (86-181)||(34006246-34006342)
chr1 (19-176)||(800806-800969)
chr1 (77-192)||(38950255-38950361)
chr1 (19-78)||(43318988-43319047)
chr1 (85-186)||(26723564-26723660)
chr1 (192-234)||(33611623-33611665)
chr1 (94-192)||(6223821-6223921)
chr1 (19-71)||(9446103-9446155)
chr1 (192-236)||(24471517-24471561)
chr1 (120-192)||(27794831-27794903)
chr1 (130-192)||(52744937-52745000)
chr1 (192-234)||(18583757-18583799)
chr1 (192-234)||(30829668-30829710)
chr1 (192-234)||(32542310-32542352)
chr1 (194-236)||(32542839-32542881)
chr1 (194-236)||(49786907-49786949)
chr1 (193-234)||(23442642-23442683)
chr1 (22-70)||(9445897-9445945)
chr1 (86-152)||(38885245-38885310)
chr1 (22-71)||(800603-800652)
chr1 (192-236)||(17000282-17000325)
chr1 (192-236)||(34162935-34162978)
chr1 (194-234)||(44937783-44937823)
[»] chr2 (24 HSPs)
chr2 (7-176)||(33366920-33367090)
chr2 (88-196)||(36949018-36949127)
chr2 (86-192)||(17474870-17474977)
chr2 (92-192)||(41510505-41510606)
chr2 (86-187)||(15995184-15995287)
chr2 (86-192)||(39447138-39447245)
chr2 (86-192)||(32187940-32188047)
chr2 (86-192)||(33452514-33452621)
chr2 (86-192)||(45153862-45153969)
chr2 (92-192)||(25217868-25217968)
chr2 (86-192)||(44465798-44465906)
chr2 (86-176)||(36874977-36875068)
chr2 (86-182)||(4268309-4268406)
chr2 (20-192)||(9847424-9847603)
chr2 (86-176)||(41854970-41855061)
chr2 (86-176)||(42894369-42894460)
chr2 (25-182)||(25715351-25715510)
chr2 (86-186)||(41203258-41203358)
chr2 (19-78)||(9847215-9847274)
chr2 (86-192)||(34517077-34517183)
chr2 (92-192)||(5507392-5507495)
chr2 (96-174)||(38308875-38308954)
chr2 (192-234)||(25715267-25715309)
chr2 (19-73)||(34519540-34519594)
[»] chr8 (31 HSPs)
chr8 (19-193)||(7971000-7971181)
chr8 (86-196)||(3094653-3094764)
chr8 (86-192)||(27928017-27928124)
chr8 (19-192)||(41530645-41530826)
chr8 (85-196)||(21004362-21004473)
chr8 (85-196)||(31519967-31520079)
chr8 (86-192)||(44106199-44106306)
chr8 (92-192)||(8885535-8885636)
chr8 (86-196)||(37248530-37248641)
chr8 (92-187)||(28916764-28916860)
chr8 (86-188)||(34853309-34853411)
chr8 (92-152)||(40994809-40994869)
chr8 (86-196)||(16310571-16310682)
chr8 (92-186)||(35676620-35676715)
chr8 (23-192)||(36404177-36404337)
chr8 (86-192)||(42280967-42281077)
chr8 (19-152)||(24627584-24627725)
chr8 (19-152)||(31234737-31234875)
chr8 (86-192)||(9073480-9073587)
chr8 (111-174)||(11698387-11698451)
chr8 (194-236)||(31519378-31519420)
chr8 (19-71)||(31234526-31234578)
chr8 (86-184)||(17119956-17120055)
chr8 (19-78)||(24627874-24627933)
chr8 (193-236)||(41530571-41530614)
chr8 (192-234)||(21004294-21004336)
chr8 (19-56)||(10833523-10833560)
chr8 (86-152)||(4259712-4259778)
chr8 (194-236)||(21004944-21004986)
chr8 (200-236)||(7971218-7971254)
chr8 (85-176)||(33472059-33472151)
[»] chr7 (33 HSPs)
chr7 (85-196)||(8154871-8154983)
chr7 (86-196)||(24042264-24042375)
chr7 (85-196)||(47202466-47202578)
chr7 (86-192)||(3936084-3936191)
chr7 (86-192)||(28230544-28230651)
chr7 (86-192)||(43737100-43737207)
chr7 (85-192)||(36629181-36629289)
chr7 (86-196)||(42925717-42925828)
chr7 (86-187)||(37518371-37518473)
chr7 (87-196)||(3304835-3304946)
chr7 (86-182)||(19225674-19225771)
chr7 (85-196)||(31643013-31643125)
chr7 (90-192)||(36408347-36408450)
chr7 (86-192)||(36468613-36468719)
chr7 (101-196)||(33574125-33574221)
chr7 (86-174)||(31985594-31985685)
chr7 (86-152)||(7115347-7115413)
chr7 (114-182)||(42877149-42877218)
chr7 (19-73)||(5731193-5731247)
chr7 (86-192)||(6467671-6467780)
chr7 (133-182)||(9151800-9151850)
chr7 (192-234)||(47202398-47202440)
chr7 (194-236)||(47203112-47203154)
chr7 (85-174)||(33151200-33151292)
chr7 (130-183)||(28349174-28349227)
chr7 (148-192)||(28346123-28346167)
chr7 (194-234)||(31643672-31643712)
chr7 (194-236)||(8155523-8155565)
chr7 (22-71)||(5730987-5731036)
chr7 (99-152)||(26555130-26555183)
chr7 (19-71)||(8214298-8214350)
chr7 (192-236)||(24042401-24042444)
chr7 (192-228)||(31642951-31642987)
[»] chr6 (22 HSPs)
chr6 (85-196)||(32035085-32035197)
chr6 (94-196)||(33413431-33413533)
chr6 (86-192)||(17264386-17264493)
chr6 (86-196)||(5699530-5699641)
chr6 (86-192)||(7412804-7412910)
chr6 (86-181)||(3717359-3717455)
chr6 (86-185)||(14587636-14587736)
chr6 (86-196)||(23406768-23406879)
chr6 (86-196)||(2813300-2813413)
chr6 (86-192)||(1945606-1945712)
chr6 (90-186)||(9905100-9905197)
chr6 (94-192)||(4508386-4508485)
chr6 (86-192)||(24604438-24604545)
chr6 (86-152)||(5638879-5638945)
chr6 (192-236)||(5638781-5638825)
chr6 (19-71)||(17501175-17501227)
chr6 (19-69)||(17500967-17501017)
chr6 (86-152)||(21517557-21517623)
chr6 (84-182)||(29289701-29289799)
chr6 (192-236)||(33413559-33413603)
chr6 (86-124)||(2539496-2539534)
chr6 (194-234)||(32044847-32044887)
[»] chr3 (47 HSPs)
chr3 (19-192)||(45244365-45244541)
chr3 (85-187)||(35142055-35142158)
chr3 (35-192)||(48303967-48304131)
chr3 (85-196)||(47301991-47302103)
chr3 (86-184)||(47740008-47740107)
chr3 (86-187)||(39149791-39149892)
chr3 (86-196)||(50716224-50716335)
chr3 (86-196)||(50796512-50796623)
chr3 (86-192)||(46622860-46622968)
chr3 (86-180)||(34821419-34821514)
chr3 (86-192)||(51258378-51258485)
chr3 (86-192)||(51540690-51540797)
chr3 (85-196)||(2358697-2358810)
chr3 (21-152)||(32025000-32025137)
chr3 (86-187)||(38977824-38977926)
chr3 (86-194)||(3902882-3902991)
chr3 (86-196)||(501216-501328)
chr3 (84-176)||(52777223-52777315)
chr3 (99-196)||(3937360-3937458)
chr3 (86-187)||(33438503-33438604)
chr3 (92-192)||(3352148-3352249)
chr3 (85-196)||(28872975-28873087)
chr3 (123-192)||(34821509-34821579)
chr3 (19-78)||(8735278-8735337)
chr3 (19-78)||(9087519-9087578)
chr3 (85-152)||(43473044-43473111)
chr3 (94-191)||(49096311-49096409)
chr3 (86-174)||(30721881-30721974)
chr3 (19-78)||(45244691-45244750)
chr3 (194-236)||(2358105-2358147)
chr3 (194-236)||(3938812-3938854)
chr3 (192-236)||(33700659-33700703)
chr3 (192-234)||(48303895-48303937)
chr3 (140-192)||(47123082-47123135)
chr3 (140-192)||(47130448-47130501)
chr3 (194-234)||(8657750-8657790)
chr3 (194-234)||(51258307-51258347)
chr3 (192-234)||(2358836-2358879)
chr3 (19-70)||(8735493-8735544)
chr3 (19-70)||(9087734-9087785)
chr3 (148-183)||(42936685-42936720)
chr3 (192-234)||(3937292-3937334)
chr3 (192-234)||(43473162-43473204)
chr3 (192-234)||(52777145-52777187)
chr3 (152-192)||(33701457-33701497)
chr3 (192-232)||(42936575-42936615)
chr3 (147-183)||(42937052-42937088)
[»] chr4 (44 HSPs)
chr4 (85-196)||(23523886-23523998)
chr4 (84-192)||(48319139-48319247)
chr4 (85-187)||(17933212-17933315)
chr4 (86-196)||(25539024-25539135)
chr4 (86-192)||(40703648-40703755)
chr4 (84-192)||(54631537-54631646)
chr4 (86-192)||(19835504-19835611)
chr4 (86-196)||(38536150-38536261)
chr4 (86-196)||(55052695-55052806)
chr4 (92-192)||(7931642-7931743)
chr4 (86-182)||(25491471-25491568)
chr4 (92-196)||(29822599-29822704)
chr4 (86-185)||(25752520-25752620)
chr4 (101-196)||(32441791-32441887)
chr4 (85-196)||(49396988-49397100)
chr4 (86-181)||(8106387-8106483)
chr4 (85-176)||(34972864-34972956)
chr4 (86-192)||(3703326-3703433)
chr4 (118-196)||(6228919-6228998)
chr4 (86-187)||(46440350-46440452)
chr4 (87-196)||(6003748-6003860)
chr4 (86-192)||(2506107-2506215)
chr4 (93-192)||(38416549-38416649)
chr4 (93-162)||(41413183-41413252)
chr4 (130-192)||(50392529-50392592)
chr4 (127-187)||(53894108-53894169)
chr4 (19-71)||(25140723-25140775)
chr4 (86-148)||(31582498-31582560)
chr4 (192-234)||(34972786-34972828)
chr4 (194-236)||(34973494-34973536)
chr4 (19-133)||(7817367-7817486)
chr4 (19-71)||(25140514-25140566)
chr4 (192-234)||(6003886-6003928)
chr4 (192-234)||(6229024-6229066)
chr4 (19-114)||(7794211-7794312)
chr4 (194-236)||(27631859-27631901)
chr4 (192-234)||(32441723-32441765)
chr4 (21-71)||(42660385-42660435)
chr4 (199-236)||(6228307-6228344)
chr4 (192-236)||(55052832-55052875)
chr4 (35-78)||(50392453-50392496)
chr4 (198-236)||(3703469-3703507)
chr4 (194-236)||(23524418-23524460)
chr4 (200-236)||(41412706-41412742)
[»] scaffold0137 (1 HSPs)
scaffold0137 (86-192)||(9573-9680)
[»] scaffold0027 (1 HSPs)
scaffold0027 (86-184)||(142039-142138)
[»] scaffold0182 (1 HSPs)
scaffold0182 (86-192)||(23098-23205)
[»] scaffold0508 (1 HSPs)
scaffold0508 (86-182)||(3471-3568)
[»] scaffold0016 (1 HSPs)
scaffold0016 (19-78)||(205814-205873)


Alignment Details
Target: chr5 (Bit Score: 154; Significance: 9e-82; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 7 - 196
Target Start/End: Complemental strand, 26319241 - 26319052
Alignment:
Q  7 gtgagatgaaactgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccggattgcaccatggaaaaaatggtgtttagggggtt 106  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||    
T  26319241 gtgatatgaaactgttacaaacatgttcagatttggtgctggtgctgtacggattacgtaatccggattgcaccatggaaaaaagggtgtttagggggtt 26319142  T
Q  107 ttcagattatgtaatccggaaacatcatgtaacgcgccctatttttgaagtttccggattacaaaatccggaaaaatccgtaactccatt 196  Q
    ||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  26319141 ttcggattatgtaatccggaaacatcatgtaacgcaccctattttggaagtttccggataacaaaatccggaaaaatccgtaactccatt 26319052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 7 - 196
Target Start/End: Original strand, 37094907 - 37095101
Alignment:
Q  7 gtgagatgaaactgttacaaacatgttcagaattggtgctggtgc------tgtccgaattacgtaatccggattgcaccatggaaaaaatggtgtttag 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||      ||| || |||||||||||||||||||||||||||||||| ||||||||     
T  37094907 gtgatatgaaactgttacaaacatgttcagaattggtgctggtgcagttgctgttcggattacgtaatccggattgcaccatggaaaaaagggtgtttaa 37095006  T
Q  101 ggggttttcagattatgtaatccggaaacatcatgtaacgcgccctatttttgaagtttccggattacaaaatccggaaaaatccgtaactccatt 196  Q
    ||| ||||| ||||  |||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  37095007 ggg-ttttcggatttggtaatccggaaacatcatgtaacgcgccttattttttaagttttcggattacaaaatccggaaaaatccgtaactccatt 37095101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 86 - 196
Target Start/End: Complemental strand, 15799270 - 15799159
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |    
T  15799270 aaaaagggtgtttagggggttttcggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaatccggaaaaacc 15799171  T
Q  185 cgtaactccatt 196  Q
    ||||||||||||    
T  15799170 cgtaactccatt 15799159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 92 - 196
Target Start/End: Complemental strand, 6156770 - 6156665
Alignment:
Q  92 ggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccggaaaaatccgtaac 190  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  6156770 ggtgtttagggggtttccggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaatccggaaaaacccgtaac 6156671  T
Q  191 tccatt 196  Q
    ||||||    
T  6156670 tccatt 6156665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 85 - 192
Target Start/End: Complemental strand, 25747071 - 25746964
Alignment:
Q  85 aaaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctatttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||||||||||||||||| ||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25747071 aaaaaatggtgtttaggggatttccggattatgtaatccgaaaacatcatgtaacgcgccctatttttgaagtttccggattagaaaatccggaaaaatc 25746972  T
Q  185 cgtaactc 192  Q
    ||| ||||    
T  25746971 cgttactc 25746964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 26190373 - 26190485
Alignment:
Q  85 aaaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctatttt-tgaagtttccggattacaaaatccggaaaaat 183  Q
    |||||| ||||||||||||||||    ||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  26190373 aaaaaagggtgtttagggggtttctgaattatgtaatccgaaaacatcatgtaacgcaccctattttttgaagtttccggattacaaaatccggaaaaat 26190472  T
Q  184 ccgtaactccatt 196  Q
    |||||||||||||    
T  26190473 ccgtaactccatt 26190485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 86 - 192
Target Start/End: Complemental strand, 20891658 - 20891551
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| |||||||||||||||||| ||||||||||| |||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  20891658 aaaaagggtgtttagggggttttcggattatgtaattcggaaacatcatgtaacatgccctattttttgaagtttccggattacaaaatccggaaaaatc 20891559  T
Q  185 cgtaactc 192  Q
    ||| ||||    
T  20891558 cgttactc 20891551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 86 - 196
Target Start/End: Original strand, 4064796 - 4064907
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| |||||||||||||||| | |||||||||||||||||||||||| |||| ||||||| ||||| |||||||||||||||| |||||||||||| |    
T  4064796 aaaaagggtgtttagggggtttccggattatgtaatccggaaacatcatctaacacgccctattttttaaagtttccggattacataatccggaaaaacc 4064895  T
Q  185 cgtaactccatt 196  Q
    ||||||||||||    
T  4064896 cgtaactccatt 4064907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 35 - 176
Target Start/End: Complemental strand, 34440837 - 34440688
Alignment:
Q  35 agaattggtgctggtgctgtccgaattacgtaatccggattgca------ccatggaaaaaat--ggtgtttagggggttttcagattatgtaatccgga 126  Q
    ||||||||||||||  ||||| |||||||||||||| |||||||      ||||| ||||||   |||||||||||||||||| ||||||| |||||| |    
T  34440837 agaattggtgctggcactgtctgaattacgtaatccagattgcatcagcaccatgaaaaaaaaagggtgtttagggggttttcggattatgcaatccgaa 34440738  T
Q  127 aacatcatgtaacgcgccctatttttgaagtttccggattacaaaatccg 176  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  34440737 aacatcatgtaacgcgtcctatttttgaagttttcggattacaaaatccg 34440688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 94 - 192
Target Start/End: Complemental strand, 38871708 - 38871609
Alignment:
Q  94 tgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctatttt-tgaagtttccggattacaaaatccggaaaaatccgtaactc 192  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||| ||||    
T  38871708 tgtttagagggttttcggattatgtaatccggaaacatcatgtaacgccccctattttatgaagttttcggattacaaaatccggaaaaatccgttactc 38871609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 12465185 - 12465293
Alignment:
Q  85 aaaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctatttt-tgaagtttccggattacaaaatccggaaaaat 183  Q
    ||||||||||||||||||| ||| | ||||   |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  12465185 aaaaaatggtgtttagggg-tttccggatt---taatccggaaacatcatgtaacacgccctattttttgaagtttccggattacaaaatccggaaaaat 12465280  T
Q  184 ccgtaactccatt 196  Q
    |||||||||||||    
T  12465281 ccgtaactccatt 12465293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 86 - 184
Target Start/End: Original strand, 40620066 - 40620165
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||||| |||||||||||||| | |||||||||||||| ||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  40620066 aaaaatgatgtttagggggtttccggattatgtaatccgaaaacatcatataacgtgccctattttttgaagtttccggattacaaaatccggaaaaatc 40620165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 176
Target Start/End: Complemental strand, 38640839 - 38640676
Alignment:
Q  19 tgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccggatt------gcaccatggaaaaaatggtgtttagggggttttcaga 112  Q
    ||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||      |||||||| |||||| |||||||| ||||| ||| ||    
T  38640839 tgttataaacatgttcagaattggtgttggtgctgtccggattacgtaatccggattgcatcagcaccatgaaaaaaagggtgttta-ggggtgttcgga 38640741  T
Q  113 ttatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccg 176  Q
    |||||||||||| | | ||||| |||||||||||| |||||||  ||||| ||||| ||||||||    
T  38640740 ttatgtaatccgaataaatcatttaacgcgccctattttttgagatttccagattataaaatccg 38640676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 86 - 185
Target Start/End: Complemental strand, 39524821 - 39524721
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| |||||||||||||||| |  ||||||||||||| |||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||    
T  39524821 aaaaagggtgtttagggggtttccgaattatgtaatccgaaaacatcatgtaacacgccctatttttttaagtttccggattacaaaatccggaaaaatc 39524722  T
Q  185 c 185  Q
    |    
T  39524721 c 39524721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 86 - 176
Target Start/End: Complemental strand, 14111942 - 14111851
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccg 176  Q
    ||||| |||||||||||| |||||||||||||||||||  ||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  14111942 aaaaagggtgtttaggggattttcagattatgtaatccaaaaacatcatgtaacgcgccctattttttgaagtttctggattacaaaatccg 14111851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 28083454 - 28083561
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| ||||||||| |||||| | |||||||||||||||||| ||||||||| |||||||| |||||||| |||||||||||||||||||||||||| |    
T  28083454 aaaaagggtgtttagagggtttccggattatgtaatccggaaatatcatgtaatgcgccctattttttgaattttccggattacaaaatccggaaaaacc 28083553  T
Q  185 cgtaactc 192  Q
    ||| ||||    
T  28083554 cgttactc 28083561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 92 - 185
Target Start/End: Complemental strand, 15957788 - 15957694
Alignment:
Q  92 ggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctattttt-gaagtttccggattacaaaatccggaaaaatcc 185  Q
    |||||||||||||||| | |||||| |||||||||||||||||||||  |||||||||||| |||||||||| ||||||||||||||||||||||    
T  15957788 ggtgtttagggggtttccggattatttaatccggaaacatcatgtaatacgccctatttttcgaagtttccgaattacaaaatccggaaaaatcc 15957694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 192
Target Start/End: Original strand, 36359604 - 36359769
Alignment:
Q  35 agaattggtgctggtgctgtccgaattacgtaatccggattgca------ccatggaaaaaat-ggtgtttagggggttttcagattatgtaatccggaa 127  Q
    |||||||||| ||||| |||| | ||||||||||| ||||||||      ||||| ||||||  ||||||||||||||||||||||||||||||||| ||    
T  36359604 agaattggtgatggtgttgtctggattacgtaatctggattgcatcaacaccatgaaaaaaaaaggtgtttagggggttttcagattatgtaatccgaaa 36359703  T
Q  128 acatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatccgtaactc 192  Q
    | ||||||| ||||| |||| |||||||  |||| ||||||||||||||| |||| ||||||||||    
T  36359704 aaatcatgttacgcgtcctattttttgagatttctggattacaaaatccgaaaaattccgtaactc 36359769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 92 - 196
Target Start/End: Complemental strand, 33487649 - 33487544
Alignment:
Q  92 ggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctattttt-gaagtttccggattacaaaatccggaaaaatccgtaac 190  Q
    ||||||||||| |||| | |||||||||| ||| ||||||||| ||||||||||||||||| ||||||| ||||||||||||| |||||||| |||||||    
T  33487649 ggtgtttagggagtttccggattatgtaacccgaaaacatcatataacgcgccctattttttgaagttttcggattacaaaattcggaaaaacccgtaac 33487550  T
Q  191 tccatt 196  Q
    ||||||    
T  33487549 tccatt 33487544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 86 - 192
Target Start/End: Complemental strand, 38372354 - 38372247
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| ||| |||| ||||||| |  |||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||| ||||||||    
T  38372354 aaaaagggtatttaaggggtttccgaattatgtaatccggaaacatcatgtaacccgccctatttttttaagtttccggattacaaaatccagaaaaatc 38372255  T
Q  185 cgtaactc 192  Q
    ||| ||||    
T  38372254 cgttactc 38372247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 86 - 182
Target Start/End: Original strand, 38692859 - 38692955
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaa 182  Q
    ||||| |||||||||||| ||| | ||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||| ||||||||    
T  38692859 aaaaagggtgtttagggg-tttccggattatgtaatccggaaacatcacgtaacgcgccctatttttttaagtttccggattacaaaattcggaaaaa 38692955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 152
Target Start/End: Original strand, 24203759 - 24203826
Alignment:
Q  85 aaaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctattttt 152  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  24203759 aaaaaagggtgtttagggggtttccggattatgtaatccggaaacatcatgtaacgcgccctattttt 24203826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 86 - 186
Target Start/End: Original strand, 32842048 - 32842149
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctatttt-tgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| |||||||| ||||| ||| ||||||||||||  |||| || || || ||||||||||||| |||||||||||||||||||||||||||||||||    
T  32842048 aaaaagggtgtttatggggtgttcggattatgtaatcttgaaaaattatctagcgcgccctattttttgaagtttccggattacaaaatccggaaaaatc 32842147  T
Q  185 cg 186  Q
    ||    
T  32842148 cg 32842149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 86 - 184
Target Start/End: Complemental strand, 8032316 - 8032217
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| |||||||||| ||| ||| |||||||||||||||||| ||||||||| | ||||||| ||||||| ||||| |||||||||||||| |||||||    
T  8032316 aaaaagggtgtttaggaggtgttcggattatgtaatccggaaaaatcatgtaatgtgccctattttttgaaatttccagattacaaaatccgaaaaaatc 8032217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 86 - 152
Target Start/End: Complemental strand, 29862657 - 29862591
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctattttt 152  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||  |||||||||||||||||    
T  29862657 aaaaatggtgtttagggggtttccggattatgtaatccggaaacatcacctaacgcgccctattttt 29862591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 86 - 174
Target Start/End: Original strand, 31221415 - 31221504
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatc 174  Q
    ||||| ||||||||| |||||| | ||||||||||||| |||||||||||||||||||| || |||||||||||| ||||||||| ||||    
T  31221415 aaaaagggtgtttagagggtttccggattatgtaatccagaaacatcatgtaacgcgccatattttttgaagttttcggattacagaatc 31221504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 38641047 - 38640988
Alignment:
Q  19 tgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccggattgca 78  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||    
T  38641047 tgttacaaacatgttcagaattggtgttggtgctgtccgaattatgtaatccagattgca 38640988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 192
Target Start/End: Original strand, 43388073 - 43388252
Alignment:
Q  19 tgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccggatt------gcaccatggaaaaaatggtgtttagggggttttcaga 112  Q
    ||||| ||| |||||||||||||||| |||| ||||| |||||||||||||||||||      |||||||| |||||| |||||||||| ||||||| ||    
T  43388073 tgttataaatatgttcagaattggtgttggtactgtctgaattacgtaatccggattgcatcagcaccatgaaaaaaagggtgtttaggaggttttcgga 43388172  T
Q  113 tta-tgtaatccggaaacatcatgtaacgcgccctatttttgaag-tttccggattacaaaatccggaaaaatccgtaactc 192  Q
    ||| | | ||  |  |  ||||||||| |||||||||||||  || |||||||||||||||||||  || ||||||||||||    
T  43388173 ttattttgat--gtgattatcatgtaatgcgccctatttttttagatttccggattacaaaatccaaaagaatccgtaactc 43388252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 84 - 184
Target Start/End: Original strand, 37183856 - 37183957
Alignment:
Q  84 gaaaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaa 182  Q
    ||||||| ||||||||| |||||| | |||||||||||| | ||| ||||||||||| |||||| |||||||||||||  ||||||||||||  ||||||    
T  37183856 gaaaaaagggtgtttagagggtttccggattatgtaatctgaaaatatcatgtaacgtgccctattttttgaagtttcaagattacaaaatctagaaaaa 37183955  T
Q  183 tc 184  Q
    ||    
T  37183956 tc 37183957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 176
Target Start/End: Original strand, 28445413 - 28445578
Alignment:
Q  19 tgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccggattgc------accatggaaaaaatggtgtttagg--gggttttca 110  Q
    |||||||||||||||||||||| ||||||||| |||||| ||||||||||||| | |||      ||||| ||||||||||||||||||  |||| |||     
T  28445413 tgttacaaacatgttcagaattcgtgctggtgatgtccggattacgtaatccgaactgcatcggtaccat-gaaaaaatggtgtttagggagggtgttcg 28445511  T
Q  111 gattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccg 176  Q
    |||| | ||||| | |||  |||| || ||||||||| |||||||  ||| ||||||||||||||||    
T  28445512 gattttataatctgaaaaattcatttagcgcgccctattttttgagattttcggattacaaaatccg 28445578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 86 - 192
Target Start/End: Complemental strand, 27212753 - 27212646
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| |||||| |||| || ||| | |||||||||||| ||| |||||||||||| ||||| |||||||  ||| |||||||||||||||| ||||| |    
T  27212753 aaaaagggtgttcagggtgtgttctggttatgtaatccgaaaaaatcatgtaacgcaccctattttttgagattttcggattacaaaatccgaaaaaacc 27212654  T
Q  185 cgtaactc 192  Q
    ||||||||    
T  27212653 cgtaactc 27212646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 8739196 - 8739255
Alignment:
Q  19 tgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccggattgca 78  Q
    ||||||||||||||||||||||||||||||||| ||  | ||||||||||||| ||||||    
T  8739196 tgttacaaacatgttcagaattggtgctggtgcagtttggattacgtaatccgaattgca 8739255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 192
Target Start/End: Original strand, 31929229 - 31929289
Alignment:
Q  133 atgtaacgcgccctattttt-gaagtttccggattacaaaatccggaaaaatccgtaactc 192  Q
    |||||| ||||||||||||| ||| |||| |||||||||||||||||||||||||| ||||    
T  31929229 atgtaatgcgccctattttttgaaatttctggattacaaaatccggaaaaatccgttactc 31929289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 4064933 - 4064976
Alignment:
Q  192 ccattccggattatgaaatccagaaacctcaagggcatttttgga 236  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||    
T  4064933 ccattccggattatgaaatccggaaa-ctcaagggcatttttgga 4064976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 16429185 - 16429133
Alignment:
Q  19 tgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccg 71  Q
    ||||||||||||||| |||||||||| |||||||||  | |||||||||||||    
T  16429185 tgttacaaacatgtttagaattggtgttggtgctgtttggattacgtaatccg 16429133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 26319026 - 26318982
Alignment:
Q  192 ccattccggattatgaaatccagaaacctcaagggcatttttgga 236  Q
    |||||||| |||||||||||| |||||| ||||||||||||||||    
T  26319026 ccattccgaattatgaaatccggaaaccgcaagggcatttttgga 26318982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 186
Target Start/End: Complemental strand, 26095129 - 26095035
Alignment:
Q  93 gtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatccg 186  Q
    ||||||| ||||| ||| |||||||||||||| ||| |  ||||||||||| ||| ||||||  ||||  ||||||||||||| | |||||||||    
T  26095129 gtgtttatggggtgttcggattatgtaatccgaaaaaaatatgtaacgcgctctattttttgtggtttttggattacaaaatcagaaaaaatccg 26095035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 234
Target Start/End: Original strand, 37095126 - 37095168
Alignment:
Q  192 ccattccggattatgaaatccagaaacctcaagggcatttttg 234  Q
    ||||||||||||||||||| |  ||||||||||||||||||||    
T  37095126 ccattccggattatgaaattcgaaaacctcaagggcatttttg 37095168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 234
Target Start/End: Complemental strand, 12464638 - 12464598
Alignment:
Q  194 attccggattatgaaatccagaaacctcaagggcatttttg 234  Q
    |||||||||||| ||||||||||| |||||| |||||||||    
T  12464638 attccggattataaaatccagaaatctcaagagcatttttg 12464598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 47
Target Start/End: Complemental strand, 16429395 - 16429367
Alignment:
Q  19 tgttacaaacatgttcagaattggtgctg 47  Q
    |||||||||||||||||||||||||||||    
T  16429395 tgttacaaacatgttcagaattggtgctg 16429367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 139; Significance: 8e-73; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 7 - 176
Target Start/End: Original strand, 24471311 - 24471481
Alignment:
Q  7 gtgagatgaaactgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccggattgcaccatggaaaaaatggtgttta-gggggt 105  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||    
T  24471311 gtgatatgaaactgttacaaacatgttcagaattgatgctggtgctgtccgaattacgtaatccggattacaccatggaaaaaagggtgtttaggggggt 24471410  T
Q  106 tttcagattatgtaatccggaaacatcatgtaacgcgccctatttttgaagtttccggattacaaaatccg 176  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  24471411 tttcggattatgtaatccggaaacatcatgtaacgcgccctatttttgaagtttctggattacaaaatccg 24471481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 7 - 176
Target Start/End: Original strand, 30829463 - 30829632
Alignment:
Q  7 gtgagatgaaactgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccggattgcaccatggaaaaaatggtgtttagggggtt 106  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||  |||||||||||||||||||| |||||||||||||||    
T  30829463 gtgatatgaaactgttacaaacatgttcagaatcggtgctggtgctgtccggattacgtaatttggattgcaccatggaaaaaagggtgtttagggggtt 30829562  T
Q  107 ttcagattatgtaatccggaaacatcatgtaacgcgccctatttttgaagtttccggattacaaaatccg 176  Q
    ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30829563 ttcggattatgtaatccgaaaacatcatgtaacgcgccctatttttgaagtttccggattacaaaatccg 30829632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 19 - 192
Target Start/End: Original strand, 43319199 - 43319379
Alignment:
Q  19 tgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccggattgca------ccatggaaaaaatggtgtttagggggttttcaga 112  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||      ||||| ||||||  ||||||||||||||||| ||    
T  43319199 tgttacaaacatgttcagaattggtgatggtgctgtccggattacgtaatccggattgcatcagcaccatgaaaaaaagagtgtttagggggttttcgga 43319298  T
Q  113 ttatgtaatccggaaacatcatgtaacgcgccctatttttgaag-tttccggattacaaaatccggaaaaatccgtaactc 192  Q
    |||||||||||| ||| ||||||||||||||| |||||||  || ||||||||||||||||||||||||||||||||||||    
T  43319299 ttatgtaatccgaaaaaatcatgtaacgcgccatatttttttagatttccggattacaaaatccggaaaaatccgtaactc 43319379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 33611485 - 33611597
Alignment:
Q  85 aaaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaat 183  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||| ||||||    
T  33611485 aaaaaagggtgtttagggggtttccagattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccaaattacaaaatccgaaaaaat 33611584  T
Q  184 ccgtaactccatt 196  Q
    |||||||||||||    
T  33611585 ccgtaactccatt 33611597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 18583619 - 18583731
Alignment:
Q  85 aaaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaat 183  Q
    |||||| |||||||||||||||| | |||||||||||||| |||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||| |    
T  18583619 aaaaaaaggtgtttagggggtttccggattatgtaatccgaaaacatcatgtaacgcgccctatttttttaagtttccagattacaaaatccggaaaagt 18583718  T
Q  184 ccgtaactccatt 196  Q
    |||||||| ||||    
T  18583719 ccgtaacttcatt 18583731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 32817687 - 32817794
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||| |    
T  32817687 aaaaagggtgtttagggggttttcggattatgtaatctggaaacatcatgtaatgcgccctattttttgaagtttccggattacaaaatctggaaaaacc 32817786  T
Q  185 cgtaactc 192  Q
    ||| ||||    
T  32817787 cgttactc 32817794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 86 - 187
Target Start/End: Complemental strand, 42546050 - 42545948
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| |||| ||||||||||||| ||| |||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  42546050 aaaaagggtgcttagggggttttcggatcatgttatccggaaacatcatgtaacgcgtcctattttttgaagtttccggattacaaaatccggaaaaatc 42545951  T
Q  185 cgt 187  Q
    |||    
T  42545950 cgt 42545948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 86 - 182
Target Start/End: Original strand, 34162797 - 34162894
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaa 182  Q
    ||||| |||||||||||||||| | |||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||    
T  34162797 aaaaagggtgtttagggggtttccggattatgtaatccggaaacatcatctaacacgccctattttttgaagtttccggattacaaaatccggaaaaa 34162894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 23442822 - 23442710
Alignment:
Q  85 aaaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctattttt-gaagtttccggattacaaaatccggaaaaat 183  Q
    |||||| | ||||| |||||||| |  ||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||    
T  23442822 aaaaaaagatgtttggggggtttccgaattatataatccggaaacatcatgtaacgcgccctattttttgaagtttccagattataaaatccggaaaaat 23442723  T
Q  184 ccgtaactccatt 196  Q
    |||||||||||||    
T  23442722 ccgtaactccatt 23442710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 86 - 196
Target Start/End: Complemental strand, 17000461 - 17000351
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctatt-tttgaagtttccggattacaaaatccggaaaaatc 184  Q
    |||||||||||||||||||||| | ||||||||||||| |||||||||| ||||| |||||||| ||||| ||||||| ||||||||||||||||||| |    
T  17000461 aaaaatggtgtttagggggtttccggattatgtaatccagaaacatcatctaacgtgccctattatttgatgtttccgaattacaaaatccggaaaaa-c 17000363  T
Q  185 cgtaactccatt 196  Q
    ||||||||||||    
T  17000362 cgtaactccatt 17000351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 40650751 - 40650858
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    |||||||||||||| ||||||| | ||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||| |||| |||||||    
T  40650751 aaaaatggtgtttaaggggtttccggattatgtaatccagaaacatcatgtaacacgccctattttttgaagtttccggattacaaattccgaaaaaatc 40650850  T
Q  185 cgtaactc 192  Q
    ||| ||||    
T  40650851 cgttactc 40650858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 49786352 - 49786241
Alignment:
Q  85 aaaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaat 183  Q
    |||||| ||||||| |||||||| | |||||||||||||||||||||||||||||||| |||| ||||| |||||| |||||| ||||||||||||||||    
T  49786352 aaaaaagggtgttt-gggggtttccggattatgtaatccggaaacatcatgtaacgcgtcctattttttaaagttttcggattgcaaaatccggaaaaat 49786254  T
Q  184 ccgtaactccatt 196  Q
    || ||||||||||    
T  49786253 ccataactccatt 49786241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 86 - 185
Target Start/End: Original strand, 28866707 - 28866806
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctatttttgaagtttccggattacaaaatccggaaaaatcc 185  Q
    ||||| ||||||||| |||| |||||||||||||||||||||| |||||||| |||||||||||||| |   ||||||||||||||||||||||||||||    
T  28866707 aaaaagggtgtttagcgggtgttcagattatgtaatccggaaaaatcatgtagcgcgccctattttttatagttccggattacaaaatccggaaaaatcc 28866806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 15069917 - 15070025
Alignment:
Q  86 aaaaatggtgtttagggggttttcag-attatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaat 183  Q
    ||||||||||||||||||| |||| | ||||| |||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||| ||| ||    
T  15069917 aaaaatggtgtttaggggggtttccggattatataatccggaaacatcatgtaacacgtcctattttttgaagtttccggattacaaaatccgaaaatat 15070016  T
Q  184 ccgtaactc 192  Q
    |||| ||||    
T  15070017 ccgttactc 15070025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 94 - 196
Target Start/End: Original strand, 41584754 - 41584857
Alignment:
Q  94 tgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatccgtaactc 192  Q
    |||||||||||||| | |||||||||||||| ||||||||||||||  |||||| |||||||| ||||||||||||||||||| |||||| ||||||||     
T  41584754 tgtttagggggtttccggattatgtaatccgaaaacatcatgtaacatgccctagtttttgaaatttccggattacaaaatccagaaaaacccgtaactt 41584853  T
Q  193 catt 196  Q
    ||||    
T  41584854 catt 41584857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 86 - 184
Target Start/End: Original strand, 44573172 - 44573271
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| || ||||| ||| ||| | |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  44573172 aaaaaaggagtttaagggatttccggattatgtaatccgaaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaatccgaaaaaatc 44573271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 92 - 173
Target Start/End: Complemental strand, 49677560 - 49677478
Alignment:
Q  92 ggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaat 173  Q
    ||||||||||||||||   |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  49677560 ggtgtttagggggtttctggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccagattacaaaat 49677478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 92 - 192
Target Start/End: Original strand, 45046933 - 45047033
Alignment:
Q  92 ggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctatttt-tgaagtttccggattacaaaatccggaaaaatccgtaac 190  Q
    |||||||||||||||| | ||||||||||| |||||||||||||||| | ||||| |||| |||||||| ||||||||||||||||||||||||||| ||    
T  45046933 ggtgtttagggggtttccggattatgtaattcggaaacatcatgtaatg-gccctcttttttgaagttttcggattacaaaatccggaaaaatccgttac 45047031  T
Q  191 tc 192  Q
    ||    
T  45047032 tc 45047033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 85 - 192
Target Start/End: Original strand, 40908009 - 40908117
Alignment:
Q  85 aaaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaat 183  Q
    |||||| |||||||||||||||||| |||||||||||||| |||||||||||| | ||||| | ||||||||||||||||||| |||||| |  ||||||    
T  40908009 aaaaaagggtgtttagggggttttcggattatgtaatccgaaaacatcatgtagcacgcccaattttttgaagtttccggattgcaaaattctaaaaaat 40908108  T
Q  184 ccgtaactc 192  Q
    |||| ||||    
T  40908109 ccgttactc 40908117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 86 - 182
Target Start/End: Complemental strand, 7011293 - 7011195
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccc--tatttttgaagtttccggattacaaaatccggaaaaa 182  Q
    ||||||| |||||||||||||||| |||||  | || |||||||||||||||||||||||  | |||||||||||||||||||||||||||| ||||||    
T  7011293 aaaaatgatgtttagggggttttcggattacatgattcggaaacatcatgtaacgcgccctttttttttgaagtttccggattacaaaatccagaaaaa 7011195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 45567952 - 45568059
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| |||||||||||||||||| ||| |||||||||  ||| |||||||| ||||||||| ||||||||||||||| |||||||||| |||||||| |    
T  45567952 aaaaagggtgtttagggggttttcggatcatgtaatccaaaaatatcatgtagcgcgccctattttttgaagtttccgaattacaaaattcggaaaaacc 45568051  T
Q  185 cgtaactc 192  Q
    ||| ||||    
T  45568052 cgttactc 45568059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 92 - 176
Target Start/End: Complemental strand, 32542473 - 32542388
Alignment:
Q  92 ggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccg 176  Q
    ||||||||||||||||   |||||||||||||| |||||||||||||||| ||||| ||||||||| |||||||||||||||||||    
T  32542473 ggtgtttagggggtttctggattatgtaatccgtaaacatcatgtaacgcaccctattttttgaagattccggattacaaaatccg 32542388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 34006342 - 34006246
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccggaaaa 181  Q
    ||||| |||||||| ||||| |||| ||||||||||||||||| |||||||| | |||||||| ||||||| ||||||||||| |||||||||||||    
T  34006342 aaaaagggtgtttatggggtgttcaaattatgtaatccggaaaaatcatgtagcccgccctattttttgaattttccggattaaaaaatccggaaaa 34006246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 176
Target Start/End: Original strand, 800806 - 800969
Alignment:
Q  19 tgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccggattgcacca-----tggaaaaaatggtgtttagggggttttcagat 113  Q
    ||||| ||||||||||||||||||||||||||| |||||  ||||||||||||||   |||||        ||||||||||||||||||||| ||| |||    
T  800806 tgttataaacatgttcagaattggtgctggtgcagtccgcgttacgtaatccggacatcaccaacaccataaaaaaatggtgtttagggggtgttcggat 800905  T
Q  114 tatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccg 176  Q
    | | ||||||| ||| ||||  ||| |||||||| |||||||  ||| ||||||||||||||||    
T  800906 tctataatccgaaaaaatcaaataaagcgccctattttttgagattttcggattacaaaatccg 800969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 192
Target Start/End: Complemental strand, 38950361 - 38950255
Alignment:
Q  77 caccatggaaaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctatttttgaagtttccggattacaaaatccg 176  Q
    ||||||| ||||||  |||||||||| |||||| |||||||||||| | ||| |||||||||||||||||||||||         ||||||||||||| |    
T  38950361 caccatgaaaaaaagagtgtttagggagttttcggattatgtaatctgaaaaaatcatgtaacgcgccctattttt---------ggattacaaaatctg 38950271  T
Q  177 gaaaaatccgtaactc 192  Q
    ||||||||||||||||    
T  38950270 gaaaaatccgtaactc 38950255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 43318988 - 43319047
Alignment:
Q  19 tgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccggattgca 78  Q
    |||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||    
T  43318988 tgttacaaacatgttcagaattggtgctggtgttgtccagattacgtaatccggattgca 43319047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 26723564 - 26723660
Alignment:
Q  85 aaaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctatttt-tgaagtttccggattacaaaatccggaaaaat 183  Q
    |||||| |||||||||||||| ||| |||||||     |||||| |||||||| | ||||||||||| ||||||||||||||||||||||||  ||||||    
T  26723564 aaaaaagggtgtttagggggtgttcggattatg-----cggaaaaatcatgtagc-cgccctattttttgaagtttccggattacaaaatccaaaaaaat 26723657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 234
Target Start/End: Original strand, 33611623 - 33611665
Alignment:
Q  192 ccattccggattatgaaatccagaaacctcaagggcatttttg 234  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  33611623 ccattctggattatgaaatccagaaacctcaagggcatttttg 33611665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 192
Target Start/End: Original strand, 6223821 - 6223921
Alignment:
Q  94 tgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta--tttttgaagtttccggattacaaaatccggaaaaatccgtaact 191  Q
    |||||| ||||| ||| |||||||||||||  ||| ||||||||| |||| |||  |||||||||||| ||||||  ||||| || ||||||||||||||    
T  6223821 tgtttatggggtgttcggattatgtaatccaaaaaaatcatgtaatgcgctctatttttttgaagttttcggattgaaaaattcgaaaaaatccgtaact 6223920  T
Q  192 c 192  Q
    |    
T  6223921 c 6223921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 9446103 - 9446155
Alignment:
Q  19 tgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccg 71  Q
    ||||| ||||||||||||||||||||||||| |||| || |||||||||||||    
T  9446103 tgttataaacatgttcagaattggtgctggtactgttcggattacgtaatccg 9446155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 24471517 - 24471561
Alignment:
Q  192 ccattccggattatgaaatccagaaacctcaagggcatttttgga 236  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||    
T  24471517 ccattccggattatgaaatccggaaacctcaaggacatttttgga 24471561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 192
Target Start/End: Complemental strand, 27794903 - 27794831
Alignment:
Q  120 atccggaaacatcatgtaacgcgccctatttttgaagtttccggattacaaaatccggaaaaatccgtaactc 192  Q
    ||||| ||| ||||||||| |||||||||||||||  ||| |||||||||||||| | |||||||| ||||||    
T  27794903 atccgaaaaaatcatgtaaagcgccctatttttgagattttcggattacaaaatctgaaaaaatccataactc 27794831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 52744937 - 52745000
Alignment:
Q  130 atcatgtaacgcgccctatttt-tgaagtttccggattacaaaatccggaaaaatccgtaactc 192  Q
    |||||||| ||||||||||||| |||||||| | ||||||||||| ||||||||||||| ||||    
T  52744937 atcatgtagcgcgccctattttttgaagttttcagattacaaaattcggaaaaatccgttactc 52745000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 192 - 234
Target Start/End: Original strand, 18583757 - 18583799
Alignment:
Q  192 ccattccggattatgaaatccagaaacctcaagggcatttttg 234  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  18583757 ccattccggattatgaaatccgaaaacctcaagggcatttttg 18583799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 192 - 234
Target Start/End: Original strand, 30829668 - 30829710
Alignment:
Q  192 ccattccggattatgaaatccagaaacctcaagggcatttttg 234  Q
    ||||||||||||||||||||| ||||| |||||||||||||||    
T  30829668 ccattccggattatgaaatccggaaacttcaagggcatttttg 30829710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 192 - 234
Target Start/End: Complemental strand, 32542352 - 32542310
Alignment:
Q  192 ccattccggattatgaaatccagaaacctcaagggcatttttg 234  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  32542352 ccattccggattatgaaatccggaaacctcaatggcatttttg 32542310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 32542839 - 32542881
Alignment:
Q  194 attccggattatgaaatccagaaacctcaagggcatttttgga 236  Q
    ||||||||||||||||||| ||||||||||||| |||||||||    
T  32542839 attccggattatgaaatccggaaacctcaagggtatttttgga 32542881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 49786907 - 49786949
Alignment:
Q  194 attccggattatgaaatccagaaacctcaagggcatttttgga 236  Q
    ||||||||||||||||||| |||||||||||| ||||||||||    
T  49786907 attccggattatgaaatccggaaacctcaaggacatttttgga 49786949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 23442683 - 23442642
Alignment:
Q  193 cattccggattatgaaatccagaaacctcaagggcatttttg 234  Q
    |||||||||| ||||||||| |||||||||||||||||||||    
T  23442683 cattccggataatgaaatccggaaacctcaagggcatttttg 23442642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 9445897 - 9445945
Alignment:
Q  22 tacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatcc 70  Q
    |||||| ||||| |||||||||||||||| |||||| ||||||||||||    
T  9445897 tacaaagatgtttagaattggtgctggtgttgtccggattacgtaatcc 9445945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 152
Target Start/End: Complemental strand, 38885310 - 38885245
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctattttt 152  Q
    ||||| |||||||| ||||||| | ||||||||||| | ||||||||||||||| |||||| |||||    
T  38885310 aaaaagggtgtttaaggggtttccggattatgtaat-ctgaaacatcatgtaacacgccctcttttt 38885245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 800603 - 800652
Alignment:
Q  22 tacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccg 71  Q
    ||||||||||||  ||||||||| ||||| |||||| |||||||||||||    
T  800603 tacaaacatgttttgaattggtgttggtgttgtccggattacgtaatccg 800652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 17000325 - 17000282
Alignment:
Q  192 ccattccggattatgaaatccagaaacctcaagggcatttttgga 236  Q
    |||||| |||||||||||||| |||| ||||||||||||||||||    
T  17000325 ccattctggattatgaaatcc-gaaaactcaagggcatttttgga 17000282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 34162935 - 34162978
Alignment:
Q  192 ccattccggattatgaaatccagaaacctcaagggcatttttgga 236  Q
    ||||||||||||||||||||| |||| |||||||| |||||||||    
T  34162935 ccattccggattatgaaatccggaaa-ctcaagggtatttttgga 34162978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 234
Target Start/End: Complemental strand, 44937823 - 44937783
Alignment:
Q  194 attccggattatgaaatccagaaacctcaagggcatttttg 234  Q
    |||||||||||||||||||  ||||||||| ||||||||||    
T  44937823 attccggattatgaaatccgaaaacctcaacggcatttttg 44937783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 2e-58; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 7 - 176
Target Start/End: Complemental strand, 33367090 - 33366920
Alignment:
Q  7 gtgagatgaaactgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccggattgcaccatggaaaaaat-ggtgtttagggggt 105  Q
    |||| |||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||  |||||| |||||||    
T  33367090 gtgatatgaaactattacaaacatgttcagaattggtgctggtgctatccggattacgtaatccggtttgcaccatggaaaaaaaaggtgttaagggggt 33366991  T
Q  106 tttcagattatgtaatccggaaacatcatgtaacgcgccctatttttgaagtttccggattacaaaatccg 176  Q
    |||| |||||||||||||||||| ||||||||||||| | |||||||||||||| ||||||||||||||||    
T  33366990 tttcggattatgtaatccggaaatatcatgtaacgcgtcttatttttgaagttttcggattacaaaatccg 33366920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 88 - 196
Target Start/End: Original strand, 36949018 - 36949127
Alignment:
Q  88 aaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatccg 186  Q
    |||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  36949018 aaatggtgtttagggggtttccggattatgtaatccgaaaacatcatgtaacgcgccctattttttgaagtttgcagattacaaaatccggaaaaatccg 36949117  T
Q  187 taactccatt 196  Q
    ||||||||||    
T  36949118 taactccatt 36949127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 17474870 - 17474977
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    |||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  17474870 aaaaattgtgtttagggggtttccggattatgtaatccggaaacatcatgtaacgcgccctattttttaaagtttccggattacaaaatccggaaaaatc 17474969  T
Q  185 cgtaactc 192  Q
    ||| ||||    
T  17474970 cgttactc 17474977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 92 - 192
Target Start/End: Original strand, 41510505 - 41510606
Alignment:
Q  92 ggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatccgtaac 190  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||| ||    
T  41510505 ggtgtttagggggtttccagattatgtaatccagaaacatcatgtaacgcgccctattttttgaagtttccggattacgaaatctggaaaaatccgttac 41510604  T
Q  191 tc 192  Q
    ||    
T  41510605 tc 41510606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 86 - 187
Target Start/End: Original strand, 15995184 - 15995287
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta--tttttgaagtttccggattacaaaatccggaaaaat 183  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||  |||||||||||||| ||||||||||||||||||||     
T  15995184 aaaaagggtgtttagggggttttcggattatgtaatccggaaacatcatgcaacgcgccctatttttttgaagtttcccgattacaaaatccggaaaaac 15995283  T
Q  184 ccgt 187  Q
    ||||    
T  15995284 ccgt 15995287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 86 - 192
Target Start/End: Complemental strand, 39447245 - 39447138
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| |||||||| ||||||| |||||||||||||||| ||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||    
T  39447245 aaaaagggtgtttatggggtttccagattatgtaatccgaaaacatcatgtaatgcgccctattttttgaagttttcggattacaaaatccggaaaaatc 39447146  T
Q  185 cgtaactc 192  Q
    ||| ||||    
T  39447145 cgttactc 39447138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 32187940 - 32188047
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||||||||||| |||||||| | ||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||| |||||| |    
T  32187940 aaaaatggtgtttcgggggtttccggattatgtaatccggaaacatcatgtaactcgccctattttttgaagtttccagattacaaaatccagaaaaacc 32188039  T
Q  185 cgtaactc 192  Q
    ||| ||||    
T  32188040 cgttactc 32188047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 33452514 - 33452621
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| ||||||||||| |||| | |||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||    
T  33452514 aaaaagggtgtttagggagtttccggattatgtgatccggaaacatcatgtaacgcgccctattttttgaagtttccgaattacaaaatccagaaaaatc 33452613  T
Q  185 cgtaactc 192  Q
    ||| ||||    
T  33452614 cgttactc 33452621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 45153862 - 45153969
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| | |||||| |    
T  45153862 aaaaagggtgtttagggggtttccggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccagattacaaaattcagaaaaacc 45153961  T
Q  185 cgtaactc 192  Q
    ||| ||||    
T  45153962 cgttactc 45153969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 92 - 192
Target Start/End: Original strand, 25217868 - 25217968
Alignment:
Q  92 ggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatccgtaac 190  Q
    |||||||||||| ||| | ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||| ||    
T  25217868 ggtgtttagggg-tttccggattatgtaatccggaaacatcatgtaacgcaccctattttttgaagtttccggattacaaaatccgaaaaaatccgttac 25217966  T
Q  191 tc 192  Q
    ||    
T  25217967 tc 25217968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 44465798 - 44465906
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaac-atcatgtaacgcgccctatttt-tgaagtttccggattacaaaatccggaaaaat 183  Q
    ||||| |||||||||||||||| | || ||||||||||  |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  44465798 aaaaagggtgtttagggggtttccggagtatgtaatccataaactatcatgtaacgcgccctattttttgaagtttccggattacaaaatccggaaaaat 44465897  T
Q  184 ccgtaactc 192  Q
    |||| ||||    
T  44465898 ccgttactc 44465906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 86 - 176
Target Start/End: Complemental strand, 36875068 - 36874977
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccg 176  Q
    |||||||||||| || |||||| | |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  36875068 aaaaatggtgttcagagggtttccggattatgtaatccggaaacatcatgtaacgcgtcctattttttgaagtttccggattacaaaatccg 36874977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 86 - 182
Target Start/End: Original strand, 4268309 - 4268406
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaa 182  Q
    ||||| |||||||| ||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||| |||||    
T  4268309 aaaaagggtgtttatggggtttccggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttttggattacaaaatccgaaaaaa 4268406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 192
Target Start/End: Original strand, 9847424 - 9847603
Alignment:
Q  20 gttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccggattgca------ccatggaaaaaatggtgtttagggggttttcagat 113  Q
    |||||||| ||||| |||||||||| |||||||||||  |||||||||||| |||||||      ||||| |||||| ||||||| |  ||| ||| |||    
T  9847424 gttacaaatatgtttagaattggtgttggtgctgtccagattacgtaatccagattgcatcagcaccatgaaaaaaaaggtgtttggatggtgttcggat 9847523  T
Q  114 tatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatccgtaactc 192  Q
    |||||||| || ||| |||||||||||||||| | |||||||  ||| |||||||||||||| ||||||||| |||||||    
T  9847524 tatgtaatacgaaaaaatcatgtaacgcgcccaattttttgagattttcggattacaaaatctggaaaaatcagtaactc 9847603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 86 - 176
Target Start/End: Original strand, 41854970 - 41855061
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccg 176  Q
    ||||| |||||||||||||||| | ||| ||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||    
T  41854970 aaaaagggtgtttagggggtttccggatcatgtaatccggaaacatcatgtaacacaccctattttttgaagtttccggattacaaaatccg 41855061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 86 - 176
Target Start/End: Complemental strand, 42894460 - 42894369
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccg 176  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||| | ||||||    
T  42894460 aaaaatggtgtttagggggtttccggattatgtaatccggaaacatcatgtaacgcgtcctatttttttaagtttccggattatataatccg 42894369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 25715510 - 25715351
Alignment:
Q  25 aaacatgttcagaattggtgctggtgctgtccgaattacgtaatccggatt------gcaccatggaaaaaatggtgtttagggggttttcagattatgt 118  Q
    ||||||||| |||||||||| ||||| |||||| |||||||||||||||||      |||||||| ||||||||||||||     || ||| ||||||||    
T  25715510 aaacatgtttagaattggtgttggtgttgtccggattacgtaatccggattgcatcagcaccatgaaaaaaatggtgttt-----gtgttcggattatgt 25715416  T
Q  119 aatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccggaaaaa 182  Q
    |||||| ||| |||| |||||||||||||| ||||||  |||  |||||||||| |||| |||||    
T  25715415 aatccgaaaaaatcaggtaacgcgccctatcttttgagatttttggattacaaagtccgaaaaaa 25715351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 186
Target Start/End: Original strand, 41203258 - 41203358
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctatttttgaagtttccggattacaaaatccggaaaaatcc 185  Q
    ||||| |||||||| ||||| ||| ||||||||||||| |||| || ||||| | | |  | |||||| |||||||||||||||||||||||||||||||    
T  41203258 aaaaagggtgtttacggggtgttcggattatgtaatccagaaaaattatgtagcaccctatttttttgtagtttccggattacaaaatccggaaaaatcc 41203357  T
Q  186 g 186  Q
    |    
T  41203358 g 41203358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 9847215 - 9847274
Alignment:
Q  19 tgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccggattgca 78  Q
    |||||||||||||||||||||||||| ||||| |||||  ||||||||||||||||||||    
T  9847215 tgttacaaacatgttcagaattggtgttggtgttgtccagattacgtaatccggattgca 9847274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 86 - 192
Target Start/End: Complemental strand, 34517183 - 34517077
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctatttttgaag-tttccggattacaaaatccggaaaaatc 184  Q
    |||||||||||||| ||||| ||  |||||||||||||| ||| |||||||||||||||||||||||  || |||   |||||||||||||| ||||||     
T  34517183 aaaaatggtgtttaaggggtatttggattatgtaatccgaaaa-atcatgtaacgcgccctattttttgagatttttcgattacaaaatccgaaaaaatt 34517085  T
Q  185 cgtaactc 192  Q
    ||||||||    
T  34517084 cgtaactc 34517077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 192
Target Start/End: Complemental strand, 5507495 - 5507392
Alignment:
Q  92 ggtgtttagggggttttcagattatgtaatccggaaaca--tcatgtaacgcgccctattttt-gaagtttccggattacaaaatccggaaaaatccgta 188  Q
    |||||||||||||| ||| |||||| ||||||| ||| |  |||||||||||| | ||||||| |||||||  |||||||||||| || ||||||| |||    
T  5507495 ggtgtttagggggtgttcggattatataatccgaaaaaaaatcatgtaacgcgtcttattttttgaagtttttggattacaaaattcgaaaaaatctgta 5507396  T
Q  189 actc 192  Q
    ||||    
T  5507395 actc 5507392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 174
Target Start/End: Original strand, 38308875 - 38308954
Alignment:
Q  96 tttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatc 174  Q
    |||| ||||| ||| |||||| ||||||||||| ||||  || ||||||||| |||||||||||| ||||||||| ||||    
T  38308875 tttaaggggtgttcggattatataatccggaaaaatcaaatagcgcgccctattttttgaagttttcggattacataatc 38308954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 234
Target Start/End: Complemental strand, 25715309 - 25715267
Alignment:
Q  192 ccattccggattatgaaatccagaaacctcaagggcatttttg 234  Q
    |||||||||||||| |||||| ||||| |||||||||||||||    
T  25715309 ccattccggattataaaatccggaaacttcaagggcatttttg 25715267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 34519540 - 34519594
Alignment:
Q  19 tgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccgga 73  Q
    ||||||||||||||||||||||| || |||||| ||  | |||||||||||||||    
T  34519540 tgttacaaacatgttcagaattgatgttggtgcagtttggattacgtaatccgga 34519594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 2e-51; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 19 - 193
Target Start/End: Original strand, 7971000 - 7971181
Alignment:
Q  19 tgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccggattgca------ccatggaaaaaatggtgtttagggggttttcaga 112  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||      |||||||||||| |||||||| ||||| ||  ||    
T  7971000 tgttacaaacatgttcagaattgatgctggtgctgtccggattacgtaatccggattgcatcagcaccatggaaaaaagggtgtttatggggtgtttgga 7971099  T
Q  113 ttatgtaatccggaaa-catcatgtaacgcgccctatttttgaagtttccggattacaaaatccggaaaaatccgtaactcc 193  Q
    ||||||||||| |||| ||||| ||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  7971100 ttatgtaatccagaaaacatcacgtagcgcgtcctatttttgaagtttccagattacaaaatccggaaaaatccgtaactcc 7971181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 86 - 196
Target Start/End: Complemental strand, 3094764 - 3094653
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |    
T  3094764 aaaaatggtgtttagggggtttccggattatgtaatccggaaacatcatgtaatgcgccctattttttgaagtttccggattacaaaatccggaaaaacc 3094665  T
Q  185 cgtaactccatt 196  Q
    ||||||||||||    
T  3094664 cgtaactccatt 3094653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 27928017 - 27928124
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  27928017 aaaaatggtgtttagggggtttcctgattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaatccggaaaaatc 27928116  T
Q  185 cgtaactc 192  Q
    ||| ||||    
T  27928117 cgttactc 27928124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 19 - 192
Target Start/End: Complemental strand, 41530826 - 41530645
Alignment:
Q  19 tgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccggattgca------ccatggaaaaaatggtgtttagggggttttcaga 112  Q
    ||||||||||||||||| |||||||| ||||| |||||| ||||||||||||||||||||      ||||| |||||| ||| |||||||||| ||||||    
T  41530826 tgttacaaacatgttcaaaattggtgatggtgatgtccggattacgtaatccggattgcaacagcaccatgaaaaaaagggtttttagggggtgttcaga 41530727  T
Q  113 ttatgtaatccggaaaca-tcatgtaacgcgccctatttttgaag-tttccggattacaaaatccggaaaaatccgtaactc 192  Q
    |||||||||| | ||| | ||||||||||||||||||||||  || ||||||||||||||||| ||||||||||||||||||    
T  41530726 ttatgtaatctgaaaaaaatcatgtaacgcgccctattttttgagatttccggattacaaaattcggaaaaatccgtaactc 41530645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 21004473 - 21004362
Alignment:
Q  85 aaaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctatttttgaa-gtttccggattacaaaatccggaaaaat 183  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||| ||||||| || ||||||||||||||||||||||||||||    
T  21004473 aaaaaatggtgtttagggagttttcggattatgtaatccggaaacat-atgtaacgcgccttattttttaaagtttccggattacaaaatccggaaaaat 21004375  T
Q  184 ccgtaactccatt 196  Q
    |||||||||||||    
T  21004374 ccgtaactccatt 21004362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 31519967 - 31520079
Alignment:
Q  85 aaaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaat 183  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||     
T  31519967 aaaaaagggtgtttagggggtttccggattatgtaatccggaaacatcatgtaacgcgctctattttttgaagtttctggattacaaaatccggaaaaag 31520066  T
Q  184 ccgtaactccatt 196  Q
    |||||||||||||    
T  31520067 ccgtaactccatt 31520079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 86 - 192
Target Start/End: Complemental strand, 44106306 - 44106199
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  44106306 aaaaagggtgtttagggggtttccggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaatctggaaaaatc 44106207  T
Q  185 cgtaactc 192  Q
    ||| ||||    
T  44106206 cgttactc 44106199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 92 - 192
Target Start/End: Original strand, 8885535 - 8885636
Alignment:
Q  92 ggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatccgtaac 190  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||    
T  8885535 ggtgtttagggggtttccggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaatccggaaaaacccgttac 8885634  T
Q  191 tc 192  Q
    ||    
T  8885635 tc 8885636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 86 - 196
Target Start/End: Complemental strand, 37248641 - 37248530
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||||||||||||||||||||   |||||||||||||||||||||||| ||||||||||||| |||| |||||| ||||||||||||||| |||||| |    
T  37248641 aaaaatggtgtttagggggtttctggattatgtaatccggaaacatcatctaacgcgccctatttttttaagttttcggattacaaaatccagaaaaacc 37248542  T
Q  185 cgtaactccatt 196  Q
    ||||||||||||    
T  37248541 cgtaactccatt 37248530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 92 - 187
Target Start/End: Complemental strand, 28916860 - 28916764
Alignment:
Q  92 ggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccggaaaaatccgt 187  Q
    |||||||||||||||| | | ||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  28916860 ggtgtttagggggtttccggtttatgtaatccagaaacatcatttaacgcgccctattttttgaagtttccggattacaaaatccggaaaaacccgt 28916764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 86 - 188
Target Start/End: Complemental strand, 34853411 - 34853309
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| ||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| |    
T  34853411 aaaaagggtgtttagagggtttccagatt-tgtaatccggaaacatcatgtaacgcgccctattttttaaagttttcggattacaaaatccggaaaaacc 34853313  T
Q  185 cgta 188  Q
    ||||    
T  34853312 cgta 34853309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 40994869 - 40994809
Alignment:
Q  92 ggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctattttt 152  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40994869 ggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctattttt 40994809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 86 - 196
Target Start/End: Complemental strand, 16310682 - 16310571
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctattttt-gaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| ||||||||||| ||||   |||| ||||||||||||| ||||| |||||| |||||||||| |||||||||||||||||||||||||||||| |    
T  16310682 aaaaagggtgtttagggagtttctggattgtgtaatccggaaaaatcatctaacgcaccctattttttgaagtttccggattacaaaatccggaaaaacc 16310583  T
Q  185 cgtaactccatt 196  Q
     |||||||||||    
T  16310582 tgtaactccatt 16310571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 92 - 186
Target Start/End: Original strand, 35676620 - 35676715
Alignment:
Q  92 ggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatccg 186  Q
    |||| ||||||||| ||| |||||||||||||||||| ||||| || ||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  35676620 ggtggttagggggtgttcggattatgtaatccggaaaaatcatatagcgcgccctattttttgtagtttccggattacaaaatccggaaaaatccg 35676715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 192
Target Start/End: Original strand, 36404177 - 36404337
Alignment:
Q  23 acaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccggattgcaccatggaaaaaatggtgtttagggggttttcagattatgtaatc 122  Q
    ||||||||||||||||||||||||||||||||||| ||| | | |        |||||||| |||||| |||||||||| | ||||| |||||| |||||    
T  36404177 acaaacatgttcagaattggtgctggtgctgtccggattgcatca--------gcaccatgaaaaaaagggtgtttaggag-ttttcggattatataatc 36404267  T
Q  123 cggaaacatcatgtaacgcgccctatttttgaag-tttccggattacaaaatccggaaaaatccgtaactc 192  Q
    || ||| |||||||||| ||||||||||||  || ||| ||||||||||||||||||| ||||||||||||    
T  36404268 cgaaaa-atcatgtaacacgccctattttttgagattttcggattacaaaatccggaataatccgtaactc 36404337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 42280967 - 42281077
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatc---atgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaa 181  Q
    ||||| |||||||||||||||| | |||||||||||| |||||||||   ||||||||||| ||| |||||||||||| |||||||| ||||||||||||    
T  42280967 aaaaagggtgtttagggggtttccggattatgtaatctggaaacatcatgatgtaacgcgctctattttttgaagttttcggattacgaaatccggaaaa 42281066  T
Q  182 atccgtaactc 192  Q
    |||||| ||||    
T  42281067 atccgttactc 42281077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 19 - 152
Target Start/End: Complemental strand, 24627725 - 24627584
Alignment:
Q  19 tgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccggatt------gcaccatg--gaaaaaatggtgtttagggggttttca 110  Q
    |||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||      ||||||||   ||||||||||||||||||||| |||     
T  24627725 tgttacaaacatattcagaattggtgctggtgttgtccggattacgtaatccggattgcatcagcaccatgaaaaaaaaatggtgtttagggggtattcg 24627626  T
Q  111 gattatgtaatccggaaacatcatgtaacgcgccctattttt 152  Q
    |||| | ||||||| ||| ||||  || |||| |||||||||    
T  24627625 gattctataatccgaaaaaatcaaatagcgcgtcctattttt 24627584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 152
Target Start/End: Original strand, 31234737 - 31234875
Alignment:
Q  19 tgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccggattgc------accatggaaaaaatggtgtttagggggttttcaga 112  Q
    |||||| ||||||||||||||||||||| |||||||||| ||||||||||||| | |||      ||||| |||||||||||||||||||| | ||| ||    
T  31234737 tgttacgaacatgttcagaattggtgctagtgctgtccggattacgtaatccgaactgcatcagtaccat-gaaaaaatggtgtttaggggttgttcgga 31234835  T
Q  113 ttatgtaatccggaaacatcatgtaacgcgccctattttt 152  Q
    || | ||||||| ||| || || || ||||||||||||||    
T  31234836 ttctataatccgaaaaaattatatagcgcgccctattttt 31234875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 192
Target Start/End: Complemental strand, 9073587 - 9073480
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| ||||||||||||||||   ||||||||||||||||||||||||||||||   | || ||||||||||||||||||||  ||||||| |||| ||    
T  9073587 aaaaaaggtgtttagggggtttctggattatgtaatccggaaacatcatgtaacgaatcttattttttgaagtttccggattaacaaatccgaaaaagtc 9073488  T
Q  185 cgtaactc 192  Q
    ||| ||||    
T  9073487 cgttactc 9073480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 174
Target Start/End: Original strand, 11698387 - 11698451
Alignment:
Q  111 gattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatc 174  Q
    ||||||||||||||||||||||||||||| || | || |||||||||||||||||||||||||||    
T  11698387 gattatgtaatccggaaacatcatgtaacacgtcttattttttgaagtttccggattacaaaatc 11698451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 31519420 - 31519378
Alignment:
Q  194 attccggattatgaaatccagaaacctcaagggcatttttgga 236  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  31519420 attccggattatgaaatccggaaacctcaagggcatttttgga 31519378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 31234526 - 31234578
Alignment:
Q  19 tgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccg 71  Q
    ||||||||| |||||||||||||||||||||| ||| || |||||||||||||    
T  31234526 tgttacaaatatgttcagaattggtgctggtgttgttcggattacgtaatccg 31234578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 184
Target Start/End: Original strand, 17119956 - 17120055
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    |||||||||||||| ||||| |||||||||| ||| ||| ||| ||||  || ||||||| | |||||||||||| ||||||| | |||||| |||||||    
T  17119956 aaaaatggtgtttaaggggtgttcagattatataaaccgaaaaaatcaaatagcgcgcccaattttttgaagttttcggattatataatccgaaaaaatc 17120055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 24627933 - 24627874
Alignment:
Q  19 tgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccggattgca 78  Q
    |||||||||||||||||||||||||| || || | |||||||||| ||||||||| ||||    
T  24627933 tgttacaaacatgttcagaattggtgttgatgttatccgaattacttaatccggactgca 24627874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 236
Target Start/End: Complemental strand, 41530614 - 41530571
Alignment:
Q  193 cattccggattatgaaatccagaaacctcaagggcatttttgga 236  Q
    ||||||||||||| |||||||||||| |||||||||||||||||    
T  41530614 cattccggattataaaatccagaaacttcaagggcatttttgga 41530571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 192 - 234
Target Start/End: Complemental strand, 21004336 - 21004294
Alignment:
Q  192 ccattccggattatgaaatccagaaacctcaagggcatttttg 234  Q
    ||||||||||||||||||||  |||||||||||||||||||||    
T  21004336 ccattccggattatgaaatctggaaacctcaagggcatttttg 21004294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 10833523 - 10833560
Alignment:
Q  19 tgttacaaacatgttcagaattggtgctggtgctgtcc 56  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  10833523 tgttacaaacatgttcagaattggtgctggtgcagtcc 10833560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 4259712 - 4259778
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctattttt 152  Q
    ||||||||||||||||||||  ||| ||||| ||||||| ||| |||| | ||| ||||||||||||    
T  4259712 aaaaatggtgtttagggggtgctcaaattatataatccgaaaaaatcaaggaacacgccctattttt 4259778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 21004944 - 21004986
Alignment:
Q  194 attccggattatgaaatccagaaacctcaagggcatttttgga 236  Q
    ||||||||||||||||| |  ||||||||||||||||||||||    
T  21004944 attccggattatgaaattcgaaaacctcaagggcatttttgga 21004986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 7971218 - 7971254
Alignment:
Q  200 gattatgaaatccagaaacctcaagggcatttttgga 236  Q
    ||||||||||||  |||||||||||||||||||||||    
T  7971218 gattatgaaatctggaaacctcaagggcatttttgga 7971254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 33472151 - 33472059
Alignment:
Q  85 aaaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccg 176  Q
    |||||||||||||||||||||  | ||||| | ||||||| ||| ||||  || |||||||||| |||||| |||| ||||||| | ||||||    
T  33472151 aaaaaatggtgtttagggggtggttagattctataatccgaaaaaatcaaatagcgcgccctattttttgaggttttcggattatagaatccg 33472059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 2e-45; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 8154983 - 8154871
Alignment:
Q  85 aaaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccggaaaaat 183  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8154983 aaaaaagggtgtttagggggttttcggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaatccggaaaaat 8154884  T
Q  184 ccgtaactccatt 196  Q
    |||||||| ||||    
T  8154883 ccgtaacttcatt 8154871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 86 - 196
Target Start/End: Original strand, 24042264 - 24042375
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |    
T  24042264 aaaaatggtgtttagggggtttccggattatgtaatccggaaacatcatgtaacgcgccttattttttgaagtttccggattacaaaatccggaaaaacc 24042363  T
Q  185 cgtaactccatt 196  Q
    ||||||||||||    
T  24042364 cgtaactccatt 24042375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 47202578 - 47202466
Alignment:
Q  85 aaaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccggaaaaat 183  Q
    |||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||    
T  47202578 aaaaaagggtgtttagggggtttccggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagttttcggattacaaaatctggaaaaat 47202479  T
Q  184 ccgtaactccatt 196  Q
    |||||||||||||    
T  47202478 ccgtaactccatt 47202466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 86 - 192
Target Start/End: Complemental strand, 3936191 - 3936084
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |    
T  3936191 aaaaagggtgtttagggggtttttggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaatccggaaaaacc 3936092  T
Q  185 cgtaactc 192  Q
    ||| ||||    
T  3936091 cgttactc 3936084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 28230544 - 28230651
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28230544 aaaaagggtgtttagggggtttccggattatgtaatccggaaacatcaagtaacgcgccctattttttgaagtttccggattacaaaatccggaaaaatc 28230643  T
Q  185 cgtaactc 192  Q
    ||| ||||    
T  28230644 cgttactc 28230651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 86 - 192
Target Start/End: Complemental strand, 43737207 - 43737100
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| |||||||||||||||| | |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  43737207 aaaaagggtgtttagggggtttccggattatgtaatccgaaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaatccggaaaaatc 43737108  T
Q  185 cgtaactc 192  Q
    ||| ||||    
T  43737107 cgttactc 43737100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 85 - 192
Target Start/End: Complemental strand, 36629289 - 36629181
Alignment:
Q  85 aaaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccggaaaaat 183  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||| || |||||||||||||||||||||    
T  36629289 aaaaaatggtgtttagagggtttccagattatgtaatccggaaacatcatgtaacgcgccctatttttttaagttaccagattacaaaatccggaaaaat 36629190  T
Q  184 ccgtaactc 192  Q
    |||| ||||    
T  36629189 ccgttactc 36629181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 86 - 196
Target Start/End: Original strand, 42925717 - 42925828
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| |||||||||||||||| | |||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||| |    
T  42925717 aaaaaaggtgtttagggggtttccggattatgtaatccgaaaacatcatgtaatgcgccctattttttgaagtttccggattacaaaatcaggaaaaacc 42925816  T
Q  185 cgtaactccatt 196  Q
    ||||||||||||    
T  42925817 cgtaactccatt 42925828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 86 - 187
Target Start/End: Original strand, 37518371 - 37518473
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    |||||||||||||||||||||| | ||||||||||||||||||| ||||||||| ||||||| ||||||||||||| |||||| ||||||||||||||||    
T  37518371 aaaaatggtgtttagggggtttccggattatgtaatccggaaacttcatgtaacacgccctattttttgaagtttctggattataaaatccggaaaaatc 37518470  T
Q  185 cgt 187  Q
    |||    
T  37518471 cgt 37518473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 87 - 196
Target Start/End: Original strand, 3304835 - 3304946
Alignment:
Q  87 aaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctatttt--tgaagtttccggattacaaaatccggaaaaatc 184  Q
    |||| ||||||| |||||||||  |||||||||||||||||| |||||||||| | |||||||||  ||||||||| |||||||||||||||||||||||    
T  3304835 aaaagggtgtttggggggtttttggattatgtaatccggaaatatcatgtaacacaccctatttttttgaagtttctggattacaaaatccggaaaaatc 3304934  T
Q  185 cgtaactccatt 196  Q
    ||||||||||||    
T  3304935 cgtaactccatt 3304946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 86 - 182
Target Start/End: Original strand, 19225674 - 19225771
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaa 182  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||||||||||||||||    
T  19225674 aaaaatggtgtttaggggatttccggattatgtaatccggaaacatcatgtaacgcaccctattttttgaagtttttggattacaaaatccggaaaaa 19225771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 31643125 - 31643013
Alignment:
Q  85 aaaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaat 183  Q
    |||||| ||||||| |||||||| | ||||||||||||||||||||||||||||| | ||||| ||||||||||||||  ||||||| |||| |||||||    
T  31643125 aaaaaagggtgtttggggggtttccggattatgtaatccggaaacatcatgtaacacaccctattttttgaagtttccaaattacaagatccagaaaaat 31643026  T
Q  184 ccgtaactccatt 196  Q
    |||||||||||||    
T  31643025 ccgtaactccatt 31643013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 90 - 192
Target Start/End: Complemental strand, 36408450 - 36408347
Alignment:
Q  90 atggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatccgta 188  Q
    |||||||||| | ||||| | ||||||||||||||||||||||||||| |||||| || ||||||||||||| ||||||||||||||||||||||||||     
T  36408450 atggtgtttatgaggtttccggattatgtaatccggaaacatcatgtatcgcgccttattttttgaagtttctggattacaaaatccggaaaaatccgtt 36408351  T
Q  189 actc 192  Q
    ||||    
T  36408350 actc 36408347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 36468613 - 36468719
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctatttt-tgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| |||||||||||||||| | |||||||||||| | |||||||||||||| ||||||||||| ||||||||||  |||||||||||||||||||||    
T  36468613 aaaaagggtgtttagggggtttccggattatgtaatctg-aaacatcatgtaacacgccctattttttgaagtttccatattacaaaatccggaaaaatc 36468711  T
Q  185 cgtaactc 192  Q
    ||| ||||    
T  36468712 cgttactc 36468719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 33574125 - 33574221
Alignment:
Q  101 ggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatccgtaactccatt 196  Q
    ||||||||| |||||||||||||| |||||||||||||||| ||||| ||||| ||||||||||||||||||||||  |||||||| ||||| ||||    
T  33574125 ggggttttcggattatgtaatccgaaaacatcatgtaacgcaccctattttttaaagtttccggattacaaaatccaaaaaaatccataacttcatt 33574221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 86 - 174
Target Start/End: Original strand, 31985594 - 31985685
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta---tttttgaagtttccggattacaaaatc 174  Q
    |||||||||||||| ||||| |||  ||||||||||||| ||| ||||||||||||||||||   ||||||| |||| ||||||||||||||    
T  31985594 aaaaatggtgtttaaggggtgttcgaattatgtaatccgaaaaaatcatgtaacgcgccctattttttttgaggttttcggattacaaaatc 31985685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 7115347 - 7115413
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctattttt 152  Q
    ||||||||||||||||||||||||||||||| |||| || ||| |||| ||||||| ||||||||||    
T  7115347 aaaaatggtgtttagggggttttcagattatataattcgaaaaaatcaagtaacgcaccctattttt 7115413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 114 - 182
Target Start/End: Original strand, 42877149 - 42877218
Alignment:
Q  114 tatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaa 182  Q
    |||||||||||||||||| ||||||||||||||| |||||  | ||||| ||||||||||||||||||||    
T  42877149 tatgtaatccggaaacattatgtaacgcgccctattttttttattttcccgattacaaaatccggaaaaa 42877218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 5731193 - 5731247
Alignment:
Q  19 tgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccgga 73  Q
    ||||| |||||||||||||||||||| |||||||||||  |||||||||||||||    
T  5731193 tgttataaacatgttcagaattggtgttggtgctgtcccgattacgtaatccgga 5731247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 192
Target Start/End: Complemental strand, 6467780 - 6467671
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccgga--ttacaaaatccggaaaaa 182  Q
    ||||| |||||||||||||| ||| |||||||||||||| | | |||||||||| | ||||| |||||||  |||| |||  ||||| ||| ||||||||    
T  6467780 aaaaagggtgtttagggggtgttcggattatgtaatccgaacaaatcatgtaacacaccctattttttgagatttctggattttacataattcggaaaaa 6467681  T
Q  183 tccgtaactc 192  Q
    ||||||||||    
T  6467680 tccgtaactc 6467671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 9151850 - 9151800
Alignment:
Q  133 atgtaacgcgccctattttt-gaagtttccggattacaaaatccggaaaaa 182  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  9151850 atgtaatgcgccctattttttgaagtttccggattacaaaatccggaaaaa 9151800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 234
Target Start/End: Complemental strand, 47202440 - 47202398
Alignment:
Q  192 ccattccggattatgaaatccagaaacctcaagggcatttttg 234  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  47202440 ccattccggattatgaaatccggaaacctcaagggcatttttg 47202398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 47203112 - 47203154
Alignment:
Q  194 attccggattatgaaatccagaaacctcaagggcatttttgga 236  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  47203112 attccggattatgaaatccggaaacctcaagggcatttttgga 47203154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 174
Target Start/End: Complemental strand, 33151292 - 33151200
Alignment:
Q  85 aaaaaatg-gtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat--ttttgaagtttccggattacaaaatc 174  Q
    |||||||| ||||||||||| ||| | |||||||||||||| | ||||||| ||| |||||||||  |||| ||||||||| |||||||||||    
T  33151292 aaaaaatgagtgtttaggggatttccggattatgtaatccgaagacatcatataatgcgccctattttttttaagtttccgaattacaaaatc 33151200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 28349174 - 28349227
Alignment:
Q  130 atcatgtaacgcgccctatttttgaagtttccggattacaaaatccggaaaaat 183  Q
    |||||||| | | ||||||||||||||||| || ||||||||||||||||||||    
T  28349174 atcatgtagcacaccctatttttgaagttttcgaattacaaaatccggaaaaat 28349227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 28346167 - 28346123
Alignment:
Q  148 tttttgaagtttccggattacaaaatccggaaaaatccgtaactc 192  Q
    ||||||||||||| |||||||||||| |||||| |||||||||||    
T  28346167 tttttgaagtttctggattacaaaattcggaaacatccgtaactc 28346123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 234
Target Start/End: Original strand, 31643672 - 31643712
Alignment:
Q  194 attccggattatgaaatccagaaacctcaagggcatttttg 234  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  31643672 attccggattatgaaagccggaaacctcaagggcatttttg 31643712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 8155523 - 8155565
Alignment:
Q  194 attccggattatgaaatccagaaacctcaagggcatttttgga 236  Q
    |||| |||||||||||||| |||||||||||| ||||||||||    
T  8155523 attctggattatgaaatccggaaacctcaaggacatttttgga 8155565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 5730987 - 5731036
Alignment:
Q  22 tacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccg 71  Q
    |||||||||||| ||||||| |||||||| |||||  |||||||||||||    
T  5730987 tacaaacatgtttagaattgttgctggtggtgtcctgattacgtaatccg 5731036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 26555130 - 26555183
Alignment:
Q  99 agggggttttcagattatgtaatccggaaacatcatgtaacgcgccctattttt 152  Q
    ||||||| ||| ||||| |||||||  ||| |||||||||||||||||||||||    
T  26555130 agggggtgttcggattaggtaatccaaaaaaatcatgtaacgcgccctattttt 26555183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 8214298 - 8214350
Alignment:
Q  19 tgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccg 71  Q
    |||| ||||||||||||||||||||| || ||| ||  |||||||||||||||    
T  8214298 tgttgcaaacatgttcagaattggtgttgatgcagtttgaattacgtaatccg 8214350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 24042401 - 24042444
Alignment:
Q  192 ccattccggattatgaaatccagaaacctcaagggcatttttgga 236  Q
    |||||||| |||||||||| ||||||| |||||||||||||||||    
T  24042401 ccattccgaattatgaaattcagaaac-tcaagggcatttttgga 24042444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 228
Target Start/End: Complemental strand, 31642987 - 31642951
Alignment:
Q  192 ccattccggattatgaaatccagaaacctcaagggca 228  Q
    ||||||| ||||||||||||| |||||||||||||||    
T  31642987 ccattccagattatgaaatccggaaacctcaagggca 31642951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 2e-45; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 32035197 - 32035085
Alignment:
Q  85 aaaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccggaaaaat 183  Q
    |||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  32035197 aaaaaagggtgtttagggggtttccggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaatccggaaaaat 32035098  T
Q  184 ccgtaactccatt 196  Q
    |||||||||||||    
T  32035097 ccgtaactccatt 32035085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 94 - 196
Target Start/End: Original strand, 33413431 - 33413533
Alignment:
Q  94 tgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctatttttgaagtttccggattacaaaatccggaaaaatccgtaactcc 193  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||    
T  33413431 tgtttagggggtttccagattatgtaatctggaaacatcatgtaacgcgccctatttttgaagtttccggattacaaaattcagaaaaattcgtaactcc 33413530  T
Q  194 att 196  Q
    |||    
T  33413531 att 33413533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 86 - 192
Target Start/End: Complemental strand, 17264493 - 17264386
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  17264493 aaaaagggtgtttagggggtttccggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccagattacaaaatccggaaaaatc 17264394  T
Q  185 cgtaactc 192  Q
    ||| ||||    
T  17264393 cgttactc 17264386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 86 - 196
Target Start/End: Complemental strand, 5699641 - 5699530
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| || ||||| |    
T  5699641 aaaaagggtgtttagggggtttccggattatgtaatccggaaacatcatgtaacgcgccctattttttcaagtttccggattacaaaattcgaaaaaacc 5699542  T
Q  185 cgtaactccatt 196  Q
    ||||||||||||    
T  5699541 cgtaactccatt 5699530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 86 - 192
Target Start/End: Complemental strand, 7412910 - 7412804
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| |||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |    
T  7412910 aaaaagggtgtttagggg-ttttcggattatgtaatccggaaacatcatgtaacacgccctattttttgaagtttccggattacaaaatccggaaaaacc 7412812  T
Q  185 cgtaactc 192  Q
    ||| ||||    
T  7412811 cgttactc 7412804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 3717359 - 3717455
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccct-atttttgaagtttccggattacaaaatccggaaaa 181  Q
    |||||| ||||||||| ||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  3717359 aaaaattgtgtttaggaggtttccagattatataatccggaaacatcatgtaacgcgccctaatttttgaagtttccggattacaaaattcggaaaa 3717455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 86 - 185
Target Start/End: Original strand, 14587636 - 14587736
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||||||||||||||||||||   |||||||||||| |||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||    
T  14587636 aaaaatggtgtttagggggtttatggattatgtaatcaggaaacatcatgtaacgcgccctattttttaaagttttcggattacaaaatccggaaaaatc 14587735  T
Q  185 c 185  Q
    |    
T  14587736 c 14587736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 86 - 196
Target Start/End: Complemental strand, 23406879 - 23406768
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    |||||||||||||||||||||| | ||||||||||||| |||||||||  ||||||||||||| |||||||||||||||||||| |||| ||||||||      
T  23406879 aaaaatggtgtttagggggtttccggattatgtaatccagaaacatcaactaacgcgccctattttttgaagtttccggattacgaaattcggaaaaact 23406780  T
Q  185 cgtaactccatt 196  Q
    ||||||||||||    
T  23406779 cgtaactccatt 23406768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 86 - 196
Target Start/End: Original strand, 2813300 - 2813413
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaa--atccggaaaaa 182  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||||||||||| | || || ||||||||||||||||||||||||  |||||||||||    
T  2813300 aaaaagggtgtttagggggtttccggattatgtaatccggaaacatcatgtaacacaccttattttttgaagtttccggattacaaaatatccggaaaaa 2813399  T
Q  183 tccgtaactccatt 196  Q
    || |||||||||||    
T  2813400 tctgtaactccatt 2813413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 1945606 - 1945712
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    |||||||| ||||||||| | |||||||||| |||||||||||  | ||||||||| ||||| |||||||||||| ||||||||||||||||||||||||    
T  1945606 aaaaatggggtttagggg-tgttcagattatataatccggaaaatttatgtaacgcaccctagtttttgaagttttcggattacaaaatccggaaaaatc 1945704  T
Q  185 cgtaactc 192  Q
    ||||||||    
T  1945705 cgtaactc 1945712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 186
Target Start/End: Complemental strand, 9905197 - 9905100
Alignment:
Q  90 atggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccggaaaaatccg 186  Q
    |||| ||||||||||| ||| |||||||||||||||||| |||| ||| |||||||||| ||||||| |||||| |||||||||||||||||||||||    
T  9905197 atggcgtttagggggtgttcggattatgtaatccggaaaaatcacgtagcgcgccctattttttgaaatttccgaattacaaaatccggaaaaatccg 9905100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 94 - 192
Target Start/End: Original strand, 4508386 - 4508485
Alignment:
Q  94 tgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccct-atttttgaagtttccggattacaaaatccggaaaaatccgtaactc 192  Q
    |||||||||| ||| | |||||| |||||||||||||||||||||| |||||| ||||||||| |||| |||||| ||||||||||||||||||| ||||    
T  4508386 tgtttaggggatttccggattatataatccggaaacatcatgtaacacgccctaatttttgaaatttctggattataaaatccggaaaaatccgttactc 4508485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 24604438 - 24604545
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    |||||||||||||| ||||| ||| |||||||||||||| | | |||||||||  ||||||| ||||||||||||  |||||||||||| ||||||||||    
T  24604438 aaaaatggtgtttaaggggtgttcggattatgtaatccgaagaaatcatgtaagacgccctattttttgaagtttttggattacaaaattcggaaaaatc 24604537  T
Q  185 cgtaactc 192  Q
    | ||||||    
T  24604538 cttaactc 24604545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 86 - 152
Target Start/End: Complemental strand, 5638945 - 5638879
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctattttt 152  Q
    ||||| |||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||    
T  5638945 aaaaagggtgtttagggatttttcaaattatgtaatccggaaacatcatgtaacgcgccctattttt 5638879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 5638825 - 5638781
Alignment:
Q  192 ccattccggattatgaaatccagaaacctcaagggcatttttgga 236  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  5638825 ccattccggattatgaaatccggaaacctcaagggcatttttgga 5638781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 17501227 - 17501175
Alignment:
Q  19 tgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccg 71  Q
    ||||||||||||||||||||||||| ||| ||||||||| |||||||||||||    
T  17501227 tgttacaaacatgttcagaattggtcctgatgctgtccggattacgtaatccg 17501175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 17501017 - 17500967
Alignment:
Q  19 tgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatc 69  Q
    ||||||||||||||||||| |||||||||||| |||||| |||||||||||    
T  17501017 tgttacaaacatgttcagatttggtgctggtgttgtccggattacgtaatc 17500967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 21517557 - 21517623
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctattttt 152  Q
    |||||||||||||| ||||||| |  |||||||||||||||||||| ||||| | ||||||||||||    
T  21517557 aaaaatggtgtttaaggggtttccgaattatgtaatccggaaacattatgtagcacgccctattttt 21517623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 182
Target Start/End: Original strand, 29289701 - 29289799
Alignment:
Q  84 gaaaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctatttttgaagtttccggattacaaaatccggaaaaa 182  Q
    |||||||||||||||| ||||| |||||||||| ||||||||||| ||||  || || | ||||||||| | | || | |||||||||||||| |||||    
T  29289701 gaaaaaatggtgtttaaggggtgttcagattatataatccggaaaaatcaaatagcgtgtcctattttttagggtttcagattacaaaatccgaaaaaa 29289799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 33413559 - 33413603
Alignment:
Q  192 ccattccggattatgaaatccagaaacctcaagggcatttttgga 236  Q
    ||||||||||||||||||||| ||||| |||| ||||||||||||    
T  33413559 ccattccggattatgaaatccggaaacatcaaaggcatttttgga 33413603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 124
Target Start/End: Complemental strand, 2539534 - 2539496
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccg 124  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  2539534 aaaaagggtgtttagggggtttccagattatgtaatccg 2539496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 234
Target Start/End: Original strand, 32044847 - 32044887
Alignment:
Q  194 attccggattatgaaatccagaaacctcaagggcatttttg 234  Q
    ||||| |||||||||||||  ||||||||||||||||||||    
T  32044847 attccagattatgaaatccgaaaacctcaagggcatttttg 32044887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 1e-40; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 19 - 192
Target Start/End: Complemental strand, 45244541 - 45244365
Alignment:
Q  19 tgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccggattgca------ccatggaaaaaatggtgtttagggggttttcaga 112  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||      ||||| |||||| |||||||    ||||||||||    
T  45244541 tgttacaaacatgttcagaattggtgctcgtgctgtccggattacgtaatccagattgcatcagcaccatgaaaaaaagggtgttt----ggttttcaga 45244446  T
Q  113 ttatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccggaaaaatccgtaactc 192  Q
    |||||||||||| ||| ||||||||||||||||||| ||||||  ||| || |||||||||||||||||||||| ||||||    
T  45244445 ttatgtaatccgaaaaaatcatgtaacgcgccctattttttgagattttcgaattacaaaatccggaaaaatccataactc 45244365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 85 - 187
Target Start/End: Complemental strand, 35142158 - 35142055
Alignment:
Q  85 aaaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccct-atttttgaagtttccggattacaaaatccggaaaaat 183  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  35142158 aaaaaatggtgtttagggggtttccggattatgtaatccggaaacatcatgtaacgcgccctaatttttgaagtttccggattacaaaacccggaaaaat 35142059  T
Q  184 ccgt 187  Q
    ||||    
T  35142058 ccgt 35142055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 35 - 192
Target Start/End: Complemental strand, 48304131 - 48303967
Alignment:
Q  35 agaattggtgctggtgctgtccgaattacgtaatccggattgca------ccatggaaaaaatggtgtttagggggttttcagattatgtaatccggaaa 128  Q
    |||||||||| |||||||||| | ||||||||||||||||||||      ||||| ||||||||||||| ||||||||||| |||||||||||| | |||    
T  48304131 agaattggtgatggtgctgtctggattacgtaatccggattgcatcaccaccatgaaaaaaatggtgttgagggggttttcggattatgtaatctgaaaa 48304032  T
Q  129 catcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatccgtaactc 192  Q
     |||||||||| | ||||| |||||||  ||||||||||||||||||||||||||||||||||||    
T  48304031 aatcatgtaacacaccctattttttgagatttccggattacaaaatccggaaaaatccgtaactc 48303967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 47302103 - 47301991
Alignment:
Q  85 aaaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaat 183  Q
    |||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||    
T  47302103 aaaaaagggtgtttaggaggttttcggattatgtaatccggaaacatcatgtaacgcgccttatttttttaagtttccggattacaaaatccggaaaaat 47302004  T
Q  184 ccgtaactccatt 196  Q
    || ||||||||||    
T  47302003 ccataactccatt 47301991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 86 - 184
Target Start/End: Original strand, 47740008 - 47740107
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  47740008 aaaaagggtgtttagggggtttccggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaatctggaaaaatc 47740107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 86 - 187
Target Start/End: Complemental strand, 39149892 - 39149791
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctatttttgaagtttccggattacaaaatccggaaaaatcc 185  Q
    |||||||||||||||||||||| | ||||||||||||||||||||  ||||||||||||||||||||  |||||| ||||||||||||||||||||||||    
T  39149892 aaaaatggtgtttagggggtttccggattatgtaatccggaaacactatgtaacgcgccctattttttgagtttctggattacaaaatccggaaaaatcc 39149793  T
Q  186 gt 187  Q
    ||    
T  39149792 gt 39149791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 86 - 196
Target Start/End: Complemental strand, 50716335 - 50716224
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| |||||||||||||||| | |||||||||||| |||||||||||||||| |||||||| ||||||||||| |||||||||||||||| ||||| |    
T  50716335 aaaaagggtgtttagggggtttccggattatgtaatctggaaacatcatgtaacacgccctattttttgaagttttcggattacaaaatccgaaaaaacc 50716236  T
Q  185 cgtaactccatt 196  Q
    ||||||||||||    
T  50716235 cgtaactccatt 50716224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 86 - 196
Target Start/End: Original strand, 50796512 - 50796623
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| |||||||||||||||| | |||||||||||| |||||||||||||||| ||||||| |||||||||||| |||||||||||||||| ||||| |    
T  50796512 aaaaagggtgtttagggggtttccggattatgtaatctggaaacatcatgtaacacgccctattttttgaagttttcggattacaaaatccgaaaaaacc 50796611  T
Q  185 cgtaactccatt 196  Q
    ||||||||||||    
T  50796612 cgtaactccatt 50796623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 46622860 - 46622968
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccgg-attacaaaatccggaaaaat 183  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||| ||||||||||||||||  ||| |||||||||||||||    
T  46622860 aaaaatggtgtttagggggtttccagattatgtaatccggaaacatcatgtaacgtgtcctattttttgaagtttccggttttataaaatccggaaaaat 46622959  T
Q  184 ccgtaactc 192  Q
    |||| ||||    
T  46622960 ccgttactc 46622968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 86 - 180
Target Start/End: Original strand, 34821419 - 34821514
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaa 180  Q
    |||||||||||||||||||||| | |||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||    
T  34821419 aaaaatggtgtttagggggtttccggattatgtaatccgaaaacatcatgtaacgcgctctattttttgaagtttccggattacaaaattcggaaa 34821514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 86 - 192
Target Start/End: Complemental strand, 51258485 - 51258378
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    |||||||||||||||||||| ||| |||||||||||||| ||| || |||||||||||||||| ||||||| |||  |||||||||||||||||||||||    
T  51258485 aaaaatggtgtttagggggtgttcggattatgtaatccgaaaaaattatgtaacgcgccctattttttgaaatttatggattacaaaatccggaaaaatc 51258386  T
Q  185 cgtaactc 192  Q
    ||||||||    
T  51258385 cgtaactc 51258378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 51540690 - 51540797
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| |||||||| ||||||| | ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||    
T  51540690 aaaaacggtgtttaaggggtttccggattatgtaattcggaaacatcatgtaacgcgccctattttttgaagtttccggattccaaaatccagaaaaatc 51540789  T
Q  185 cgtaactc 192  Q
    ||| ||||    
T  51540790 cgttactc 51540797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 2358697 - 2358810
Alignment:
Q  85 aaaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctatttt--tgaagtttccggattacaaaatccggaaaaa 182  Q
    |||||| ||||||| | |||||| | |||||||||| |||||||||||||||||| |||||||||||  |||||||||||||||||||||||| | ||||    
T  2358697 aaaaaagggtgtttggagggtttccggattatgtaagccggaaacatcatgtaacacgccctatttttttgaagtttccggattacaaaatccaggaaaa 2358796  T
Q  183 tccgtaactccatt 196  Q
    ||||||||||||||    
T  2358797 tccgtaactccatt 2358810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 21 - 152
Target Start/End: Complemental strand, 32025137 - 32025000
Alignment:
Q  21 ttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccggattgc------accatggaaaaaatggtgtttagggggttttcagatt 114  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| | |||      |||||| ||||||||||||||||||||| ||||||||    
T  32025137 ttacaaacatgttcagaattggtgctggtgttgtccgaattacgtaatccgaactgcatcaggaccatgaaaaaaatggtgtttagggggtgttcagatt 32025038  T
Q  115 atgtaatccggaaacatcatgtaacgcgccctattttt 152  Q
     | ||||||| ||| ||||| ||  |||||||||||||    
T  32025037 ctataatccgaaaaaatcatatagtgcgccctattttt 32025000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 86 - 187
Target Start/End: Original strand, 38977824 - 38977926
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| |||||||||||||||||| |||||||||||||  ||||| |||||||||||||||| |||||||||||||||||||||||||||  ||||||||    
T  38977824 aaaaaaggtgtttagggggttttcggattatgtaatcccaaaacaccatgtaacgcgccctattttttgaagtttccggattacaaaatctagaaaaatc 38977923  T
Q  185 cgt 187  Q
    |||    
T  38977924 cgt 38977926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 3902882 - 3902991
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| |||||||||||||||| | |||||||||||||  |||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||| |    
T  3902882 aaaaagggtgtttagggggtttccggattatgtaatccaaaaacatcatgtaacgcgctctattttttgaagttttcggattacaaaatccggaaaaacc 3902981  T
Q  185 cgtaactcca 194  Q
     |||||||||    
T  3902982 agtaactcca 3902991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 86 - 196
Target Start/End: Original strand, 501216 - 501328
Alignment:
Q  86 aaaaatggtgtttagggggttttcag-attatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaat 183  Q
    ||||| |||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||     
T  501216 aaaaaaggtgtttagggggttttccggattatgcaatccggaaacatcatgtaacgcgccctattttttgaagtttttggattacaaaatccggaaaaac 501315  T
Q  184 ccgtaactccatt 196  Q
     | ||||||||||    
T  501316 tcataactccatt 501328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 84 - 176
Target Start/End: Complemental strand, 52777315 - 52777223
Alignment:
Q  84 gaaaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctatttttgaagtttccggattacaaaatccg 176  Q
    ||||||| |||||||||||||||| |  ||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||    
T  52777315 gaaaaaagggtgtttagggggtttccttattatgtaatccggaaacatcatgtaaagtgctctatttttgaagtttccggattacaaaatccg 52777223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 196
Target Start/End: Complemental strand, 3937458 - 3937360
Alignment:
Q  99 agggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccggaaaaatccgtaactccatt 196  Q
    |||| ||||||  |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||  ||||||||||||    
T  3937458 agggtgttttcgaattatgtaatccagaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaattcggaaaaactcgtaactccatt 3937360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 86 - 187
Target Start/End: Complemental strand, 33438604 - 33438503
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||||||||||| | |||||| || |||||||||||||||| |||||||||||||||||||| |||||||||||  |||||||||||| | ||||||||    
T  33438604 aaaaatggtgttttgagggtttccacattatgtaatccggaa-catcatgtaacgcgccctattttttgaagtttttggattacaaaattcagaaaaatc 33438506  T
Q  185 cgt 187  Q
    |||    
T  33438505 cgt 33438503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 92 - 192
Target Start/End: Original strand, 3352148 - 3352249
Alignment:
Q  92 ggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatccgtaac 190  Q
    |||||||||||||||| |  |||||||||||||||||||||||||||||| ||||| ||||| |||||||| |||||||||||  |||||||| ||| ||    
T  3352148 ggtgtttagggggtttccgaattatgtaatccggaaacatcatgtaacgcaccctatttttttaagtttcctgattacaaaatttggaaaaattcgttac 3352247  T
Q  191 tc 192  Q
    ||    
T  3352248 tc 3352249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 28873087 - 28872975
Alignment:
Q  85 aaaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaat 183  Q
    |||||| ||||||||||||||| |  ||||||||||||||||||||| |||||||||| |||| |||||||| ||| ||||||| ||||||| ||||||     
T  28873087 aaaaaagggtgtttagggggttgttggattatgtaatccggaaacataatgtaacgcgtcctattttttgaaattttcggattataaaatccagaaaaac 28872988  T
Q  184 ccgtaactccatt 196  Q
     ||||||| ||||    
T  28872987 tcgtaacttcatt 28872975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 34821509 - 34821579
Alignment:
Q  123 cggaaacatcatgtaacgcgccctatttt-tgaagtttccggattacaaaatccggaaaaatccgtaactc 192  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||    
T  34821509 cggaaacatcaggtaacgcgccctattttttgaagtttccggattacaaaatccggaaaattccgttactc 34821579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 8735337 - 8735278
Alignment:
Q  19 tgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccggattgca 78  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  8735337 tgttataaacatgttcagaattggtgctggtgctgtccgaatttcgtaatctggattgca 8735278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 9087578 - 9087519
Alignment:
Q  19 tgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccggattgca 78  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  9087578 tgttataaacatgttcagaattggtgctggtgctgtccgaatttcgtaatctggattgca 9087519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 152
Target Start/End: Original strand, 43473044 - 43473111
Alignment:
Q  85 aaaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctattttt 152  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||| || || |||||||    
T  43473044 aaaaaatggtgtttagggggtttccggattatgtaatccggaaacatcatgtaatgcaccatattttt 43473111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 94 - 191
Target Start/End: Original strand, 49096311 - 49096409
Alignment:
Q  94 tgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctatttttgaag-tttccggattacaaaatccggaaaaatccgtaact 191  Q
    |||||||||||| ||  ||||||||||| || ||| ||||||||||  ||| |||||||  || |||||||||||||||||||||||||||||||||||    
T  49096311 tgtttagggggtgtttggattatgtaattcgaaaaaatcatgtaacatgccatattttttgagatttccggattacaaaatccggaaaaatccgtaact 49096409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 86 - 174
Target Start/End: Original strand, 30721881 - 30721974
Alignment:
Q  86 aaaaatggtgtttagggg-gttttcagattatgtaatccggaaacatcatgtaac---gcgccctatttt-tgaagtttccggattacaaaatc 174  Q
    |||||||||||||||||| || ||| |||||||||||||| ||| |||||||||    |||||||||||| |||||||| ||||||||||||||    
T  30721881 aaaaatggtgtttaggggagtgttcggattatgtaatccgaaaaaatcatgtaatattgcgccctattttttgaagttttcggattacaaaatc 30721974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 45244750 - 45244691
Alignment:
Q  19 tgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccggattgca 78  Q
    ||||| |||||||||||||||||||| ||||  |||||| ||||||||||||||||||||    
T  45244750 tgttataaacatgttcagaattggtgatggtattgtccggattacgtaatccggattgca 45244691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 2358147 - 2358105
Alignment:
Q  194 attccggattatgaaatccagaaacctcaagggcatttttgga 236  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  2358147 attccggattatgaaatccggaaacctcaagggcatttttgga 2358105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 3938812 - 3938854
Alignment:
Q  194 attccggattatgaaatccagaaacctcaagggcatttttgga 236  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  3938812 attccggattatgaaatccggaaacctcaagggcatttttgga 3938854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 33700703 - 33700659
Alignment:
Q  192 ccattccggattatgaaatccagaaacctcaagggcatttttgga 236  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||    
T  33700703 ccattccggattatgaaatccagaaacttcaaggacatttttgga 33700659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 192 - 234
Target Start/End: Complemental strand, 48303937 - 48303895
Alignment:
Q  192 ccattccggattatgaaatccagaaacctcaagggcatttttg 234  Q
    ||||||||||||||||||||  |||||||||||||||||||||    
T  48303937 ccattccggattatgaaatctggaaacctcaagggcatttttg 48303895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 192
Target Start/End: Complemental strand, 47123135 - 47123082
Alignment:
Q  140 gcgccctattttt-gaagtttccggattacaaaatccggaaaaatccgtaactc 192  Q
    ||||||||||||| ||||||||||||||||||||| |||||||| |||| ||||    
T  47123135 gcgccctattttttgaagtttccggattacaaaattcggaaaaacccgttactc 47123082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 192
Target Start/End: Complemental strand, 47130501 - 47130448
Alignment:
Q  140 gcgccctattttt-gaagtttccggattacaaaatccggaaaaatccgtaactc 192  Q
    ||||||||||||| ||||||||||||||||||||| |||||||| |||| ||||    
T  47130501 gcgccctattttttgaagtttccggattacaaaattcggaaaaacccgttactc 47130448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 234
Target Start/End: Original strand, 8657750 - 8657790
Alignment:
Q  194 attccggattatgaaatccagaaacctcaagggcatttttg 234  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  8657750 attccggattatgaaatccggaaacctcaaggacatttttg 8657790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 234
Target Start/End: Complemental strand, 51258347 - 51258307
Alignment:
Q  194 attccggattatgaaatccagaaacctcaagggcatttttg 234  Q
    ||||||||||||||||||||||||| |||||| ||||||||    
T  51258347 attccggattatgaaatccagaaacttcaaggacatttttg 51258307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 234
Target Start/End: Original strand, 2358836 - 2358879
Alignment:
Q  192 ccattccggattatgaaatcc-agaaacctcaagggcatttttg 234  Q
    |||||||||||||||||||||  |||||||||||||||||||||    
T  2358836 ccattccggattatgaaatccgggaaacctcaagggcatttttg 2358879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 8735544 - 8735493
Alignment:
Q  19 tgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatcc 70  Q
    ||||||||||||||||| |||||||| || || |||||| ||||||||||||    
T  8735544 tgttacaaacatgttcataattggtgttgatgttgtccggattacgtaatcc 8735493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 9087785 - 9087734
Alignment:
Q  19 tgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatcc 70  Q
    ||||||||||||||||| |||||||| || || |||||| ||||||||||||    
T  9087785 tgttacaaacatgttcataattggtgttgatgttgtccggattacgtaatcc 9087734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 183
Target Start/End: Complemental strand, 42936720 - 42936685
Alignment:
Q  148 tttttgaagtttccggattacaaaatccggaaaaat 183  Q
    |||||||||||| |||||||||||||||||||||||    
T  42936720 tttttgaagttttcggattacaaaatccggaaaaat 42936685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 234
Target Start/End: Complemental strand, 3937334 - 3937292
Alignment:
Q  192 ccattccggattatgaaatccagaaacctcaagggcatttttg 234  Q
    |||||| ||||||| |||||| |||||||||||||||||||||    
T  3937334 ccattctggattataaaatccggaaacctcaagggcatttttg 3937292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 234
Target Start/End: Original strand, 43473162 - 43473204
Alignment:
Q  192 ccattccggattatgaaatccagaaacctcaagggcatttttg 234  Q
    ||||||||||||||||||| | |||||||||||| ||||||||    
T  43473162 ccattccggattatgaaattcggaaacctcaaggacatttttg 43473204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 234
Target Start/End: Complemental strand, 52777187 - 52777145
Alignment:
Q  192 ccattccggattatgaaatccagaaacctcaagggcatttttg 234  Q
    ||||||| |||||||||||||  ||||||||||||||||||||    
T  52777187 ccattccagattatgaaatccgaaaacctcaagggcatttttg 52777145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 192
Target Start/End: Original strand, 33701457 - 33701497
Alignment:
Q  152 tgaagtttccggattacaaaatccggaaaaatccgtaactc 192  Q
    |||||||||||||||||  ||||||||||||| ||||||||    
T  33701457 tgaagtttccggattacgtaatccggaaaaattcgtaactc 33701497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 232
Target Start/End: Complemental strand, 42936615 - 42936575
Alignment:
Q  192 ccattccggattatgaaatccagaaacctcaagggcatttt 232  Q
    ||||||||||||||||||||| ||||| ||||||| |||||    
T  42936615 ccattccggattatgaaatccggaaacttcaagggtatttt 42936575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 183
Target Start/End: Original strand, 42937052 - 42937088
Alignment:
Q  147 atttttgaagtttccggattacaaaatccggaaaaat 183  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  42937052 atttttgatgtttccggattacaaaatccgaaaaaat 42937088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 3e-38; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 23523998 - 23523886
Alignment:
Q  85 aaaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaat 183  Q
    |||||| ||||||||||||||||   |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||    
T  23523998 aaaaaagggtgtttagggggtttctggattatgtaatccggaaacatcatgtaacgcgtcctattttttgaagtttccggattacaaaatccgaaaaaat 23523899  T
Q  184 ccgtaactccatt 196  Q
    |||||||||||||    
T  23523898 ccgtaactccatt 23523886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 84 - 192
Target Start/End: Original strand, 48319139 - 48319247
Alignment:
Q  84 gaaaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaa 182  Q
    ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  48319139 gaaaaaaaggtgtttagggggttttcggattatgtaatccagaaacatcatgtaacgcgccctattttttgaagtttccggattac-aaatccggaaaaa 48319237  T
Q  183 tccgtaactc 192  Q
    ||||| ||||    
T  48319238 tccgtcactc 48319247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 187
Target Start/End: Original strand, 17933212 - 17933315
Alignment:
Q  85 aaaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaat 183  Q
    |||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||    
T  17933212 aaaaaagggtgtttaaggggtttccagattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttctggattacaaaatctggaaaaat 17933311  T
Q  184 ccgt 187  Q
    ||||    
T  17933312 ccgt 17933315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 86 - 196
Target Start/End: Original strand, 25539024 - 25539135
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctatttt-tgaagtttccggattacaaaatccggaaaaatc 184  Q
    |||||| ||||||||||||||| | ||||||||||||| |||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||| |    
T  25539024 aaaaatagtgtttagggggtttccggattatgtaatccagaaacatcatgtaacatgccctattttttgaagtttccggattacaaaatccggaaaaacc 25539123  T
Q  185 cgtaactccatt 196  Q
    ||||||||||||    
T  25539124 cgtaactccatt 25539135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 86 - 192
Target Start/End: Complemental strand, 40703755 - 40703648
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||| || ||||| |||||||| ||||||||||||||||||||||||||||    
T  40703755 aaaaagggtgtttagggggttttcaggttatgtaatccggaaacatcatgtaatgcaccctattttttgaaatttccggattacaaaatccggaaaaatc 40703656  T
Q  185 cgtaactc 192  Q
    ||| ||||    
T  40703655 cgttactc 40703648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 84 - 192
Target Start/End: Original strand, 54631537 - 54631646
Alignment:
Q  84 gaaaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaa 182  Q
    |||||||  ||||||||||||||| | |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  54631537 gaaaaaaatgtgtttagggggtttccggattatgtaatccggaaacatcatgtaacgcgccatactttttgaagtttccggattacaaaatccggaaaaa 54631636  T
Q  183 tccgtaactc 192  Q
     |||| ||||    
T  54631637 cccgttactc 54631646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 86 - 192
Target Start/End: Complemental strand, 19835611 - 19835504
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctattttt-gaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||| |    
T  19835611 aaaaagggtgtttagggggtttccggattatgtaatccggaaacatcatgtaacgcaccctatttttcaaagtttccggattacaaaatccggaaaaacc 19835512  T
Q  185 cgtaactc 192  Q
    ||| ||||    
T  19835511 cgttactc 19835504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 86 - 196
Target Start/End: Complemental strand, 38536261 - 38536150
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| |||||||||||||||| | |||||||||||| |||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||| |    
T  38536261 aaaaaaggtgtttagggggtttccggattatgtaatctggaaacatcatgtaacacgccctattttttgaagtttccgaattacaaaatccggaaaaacc 38536162  T
Q  185 cgtaactccatt 196  Q
    ||||||| ||||    
T  38536161 cgtaacttcatt 38536150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 86 - 196
Target Start/End: Original strand, 55052695 - 55052806
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| |||||||||||||||| | |||||| ||||||||||||||||| |||| ||||||| |||||||||||||||||||||| |||||||||||| |    
T  55052695 aaaaagggtgtttagggggtttccggattatataatccggaaacatcatctaacacgccctattttttgaagtttccggattacataatccggaaaaacc 55052794  T
Q  185 cgtaactccatt 196  Q
    ||||||||||||    
T  55052795 cgtaactccatt 55052806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 92 - 192
Target Start/End: Complemental strand, 7931743 - 7931642
Alignment:
Q  92 ggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccggaaaaatccgtaac 190  Q
    |||||||||||||||| | ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||| |||| ||    
T  7931743 ggtgtttagggggtttccggattatgtaatccggaaacataatgtaacgcgccctattttttgaagtttccggattgcaaaatccggaaaaacccgttac 7931644  T
Q  191 tc 192  Q
    ||    
T  7931643 tc 7931642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 86 - 182
Target Start/End: Original strand, 25491471 - 25491568
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaa 182  Q
    ||||| |||||||||||||||| | |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||    
T  25491471 aaaaaaggtgtttagggggtttccggattatgtaatccggaaacatcatgtaacgcgtcctattttttgaagtttccggattacaaaatccgaaaaaa 25491568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 92 - 196
Target Start/End: Complemental strand, 29822704 - 29822599
Alignment:
Q  92 ggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctattttt-gaagtttccggattacaaaatccggaaaaatccgtaac 190  Q
    |||||||| ||||||| | |||||||||||||| ||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||| |||||||    
T  29822704 ggtgtttatggggtttccggattatgtaatccgaaaacatcatgtaacgcgctgtattttttgaagtttccggattacaaaatccggaaaaacccgtaac 29822605  T
Q  191 tccatt 196  Q
    ||||||    
T  29822604 tccatt 29822599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 86 - 185
Target Start/End: Original strand, 25752520 - 25752620
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| |||||||| ||||||||| |||||||||||| ||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||    
T  25752520 aaaaagggtgtttatggggttttcggattatgtaatctggaaacatcatgtaatgcgccctattttttgaaatttccggattacaaaatccggaaaaatc 25752619  T
Q  185 c 185  Q
    |    
T  25752620 c 25752620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 32441887 - 32441791
Alignment:
Q  101 ggggttttcagattatgtaatccggaaacatcatgtaacgcgccctattttt-gaagtttccggattacaaaatccggaaaaatccgtaactccatt 196  Q
    ||||||| | ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||| ||||||||||    
T  32441887 ggggtttccggattatgtaatccggaaacatcatgtaacgcgcgctattttttgaagtttccggattacaaaatccagaaaaatccttaactccatt 32441791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 49397100 - 49396988
Alignment:
Q  85 aaaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctattttt-gaagtttccggattacaaaatccggaaaaat 183  Q
    |||||||| |||||| ||| ||||| |||||||||||||  ||||||| ||||||||  ||||||||| |||||||||||||||||||||||||||||||    
T  49397100 aaaaaatgatgtttaagggattttcggattatgtaatccaaaaacatcttgtaacgcatcctattttttgaagtttccggattacaaaatccggaaaaat 49397001  T
Q  184 ccgtaactccatt 196  Q
    |||||||||||||    
T  49397000 ccgtaactccatt 49396988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 8106483 - 8106387
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccggaaaa 181  Q
    |||||||||||||||||||| ||| ||||||||||| |||||| |||||||| |||||||||| ||||||||||| |||||||||||||||||||||    
T  8106483 aaaaatggtgtttagggggtgttcggattatgtaatacggaaaaatcatgtagcgcgccctattttttgaagttttcggattacaaaatccggaaaa 8106387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 34972956 - 34972864
Alignment:
Q  85 aaaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccg 176  Q
    ||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||| |||| |||||||| ||||||||||||||    
T  34972956 aaaaaatggtgtttagggggttttcggattatgtagtccgaaaacatcatgtaacgcgccctatttttttaagtttccagattacaaaatccg 34972864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 3703326 - 3703433
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    |||||||||||||||||||| |||  ||||||||||||| ||| |||||||||| || |||| |||||||||||| |||||||||||||||| |||||||    
T  3703326 aaaaatggtgtttagggggtgttcgaattatgtaatccgaaaaaatcatgtaacacgtcctattttttgaagttttcggattacaaaatccgaaaaaatc 3703425  T
Q  185 cgtaactc 192  Q
    ||||||||    
T  3703426 cgtaactc 3703433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 118 - 196
Target Start/End: Original strand, 6228919 - 6228998
Alignment:
Q  118 taatccggaaacatcatgtaacgcgccctatttt-tgaagtttccggattacaaaatccggaaaaatccgtaactccatt 196  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||    
T  6228919 taatccggaaacatcatgtaacgcgccctattttttgaagtttccgggttacaaaatccggaaaaatccgtagctccatt 6228998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 86 - 187
Target Start/End: Original strand, 46440350 - 46440452
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| |||||||||||||||| | |||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||| ||||| |||||||| |    
T  46440350 aaaaagggtgtttagggggtttccggattatgtaatccggaaacatcatgtaacgcgtcctatttttttaagtttccggattataaaattcggaaaaacc 46440449  T
Q  185 cgt 187  Q
    |||    
T  46440450 cgt 46440452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 87 - 196
Target Start/End: Original strand, 6003748 - 6003860
Alignment:
Q  87 aaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccc---tatttttgaagtttccggattacaaaatccggaaaaat 183  Q
    |||| |||||||||||||||| | ||||||||||||||||||||||||||||||| | |   | ||||| |||||||||||||| ||||| || ||||||    
T  6003748 aaaaaggtgtttagggggtttccggattatgtaatccggaaacatcatgtaacgcactcttattttttttaagtttccggattataaaattcgaaaaaat 6003847  T
Q  184 ccgtaactccatt 196  Q
    |||||||||||||    
T  6003848 ccgtaactccatt 6003860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 2506107 - 2506215
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccct--atttttgaagtttccggattacaaaatccggaaaaat 183  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||||   ||||||| ||||| | || |||||||  ||||||||    
T  2506107 aaaaagggtgtttagggggtttccggattatgtaatccggaaacatcatgtaacgcgcccttattttttgatgtttctgaatcacaaaatttggaaaaat 2506206  T
Q  184 ccgtaactc 192  Q
    |||| ||||    
T  2506207 ccgttactc 2506215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 93 - 192
Target Start/End: Complemental strand, 38416649 - 38416549
Alignment:
Q  93 gtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat-ttttgaagtttccggattacaaaatccggaaaaatccgtaact 191  Q
    ||||||||||||| ||| |||||||||||||| ||| ||||||||||| ||||||| |||| | ||||||||||||||||||  | ||||||||| ||||    
T  38416649 gtgtttagggggtgttcggattatgtaatccgaaaaaatcatgtaacgtgccctatttttttatgtttccggattacaaaatttgaaaaaatccgcaact 38416550  T
Q  192 c 192  Q
    |    
T  38416549 c 38416549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 162
Target Start/End: Original strand, 41413183 - 41413252
Alignment:
Q  93 gtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctatttttgaagtttccg 162  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||| ||   |||||||||||||||    
T  41413183 gtgtttagggggtttccggattatgtaatccggaaacatcatgtaacgctcctattttttgaagtttccg 41413252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 50392529 - 50392592
Alignment:
Q  130 atcatgtaacgcgccctatttttgaag-tttccggattacaaaatccggaaaaatccgtaactc 192  Q
    |||||||||||||||| ||||||  || ||||||||||||||||||||||||||||||||||||    
T  50392529 atcatgtaacgcgccccattttttgagatttccggattacaaaatccggaaaaatccgtaactc 50392592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 53894108 - 53894169
Alignment:
Q  127 aacatcatgtaacgcgccctatttt-tgaagtttccggattacaaaatccggaaaaatccgt 187  Q
    ||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||| ||||    
T  53894108 aacatcatgtaacgcgccctattttttgaagtttcctgattgcaaaatccggaaaaacccgt 53894169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 25140723 - 25140775
Alignment:
Q  19 tgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccg 71  Q
    ||||||||||||||||||||||||||||| |||||| || |||||||||||||    
T  25140723 tgttacaaacatgttcagaattggtgctgatgctgttcggattacgtaatccg 25140775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 148
Target Start/End: Original strand, 31582498 - 31582560
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgccctat 148  Q
    ||||| |||||||||||||||| | |||||||||||| | ||||||||||||| |||||||||    
T  31582498 aaaaagggtgtttagggggtttccggattatgtaatcagaaaacatcatgtaatgcgccctat 31582560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 234
Target Start/End: Complemental strand, 34972828 - 34972786
Alignment:
Q  192 ccattccggattatgaaatccagaaacctcaagggcatttttg 234  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  34972828 ccattccggattatgaaatccggaaacctcaagggcatttttg 34972786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 34973494 - 34973536
Alignment:
Q  194 attccggattatgaaatccagaaacctcaagggcatttttgga 236  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  34973494 attccggattatgaaacccagaaacctcaagggcatttttgga 34973536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 7817367 - 7817486
Alignment:
Q  19 tgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccgga------ttgcaccatggaaaaaatggtgtttagggggttttcaga 112  Q
    ||||| |||||||||||||||||||| |||||||||||  ||||||||||| |||        ||||||| ||||||||||||||||| |||| ||||||    
T  7817367 tgttataaacatgttcagaattggtgttggtgctgtccagattacgtaatctggacatcaccagcaccat-gaaaaaatggtgtttagagggtgttcaga 7817465  T
Q  113 ttatgtaatccggaaacatca 133  Q
    || | ||||||| ||| ||||    
T  7817466 ttctttaatccgaaaaaatca 7817486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 25140514 - 25140566
Alignment:
Q  19 tgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccg 71  Q
    |||||||||||||||||||||||||| || |||| | ||||||||||||||||    
T  25140514 tgttacaaacatgttcagaattggtgttgatgctattcgaattacgtaatccg 25140566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 192 - 234
Target Start/End: Original strand, 6003886 - 6003928
Alignment:
Q  192 ccattccggattatgaaatccagaaacctcaagggcatttttg 234  Q
    ||||||||||||||||||||||||||||||||||  |||||||    
T  6003886 ccattccggattatgaaatccagaaacctcaaggatatttttg 6003928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 192 - 234
Target Start/End: Original strand, 6229024 - 6229066
Alignment:
Q  192 ccattccggattatgaaatccagaaacctcaagggcatttttg 234  Q
    ||||||||||||||||||||| |||||||||||| ||||||||    
T  6229024 ccattccggattatgaaatcctgaaacctcaaggacatttttg 6229066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 7794211 - 7794312
Alignment:
Q  19 tgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccgga------ttgcaccatggaaaaaatggtgtttagggggttttcaga 112  Q
    ||||| ||| ||||||| |||||||| ||||| |||||||||||||||||| |||        |||||||| |||||||||||||||| |||| ||||||    
T  7794211 tgttataaatatgttcaaaattggtgttggtgttgtccgaattacgtaatctggacagcaccagcaccatgaaaaaaatggtgtttagagggtgttcaga 7794310  T
Q  113 tt 114  Q
    ||    
T  7794311 tt 7794312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 27631901 - 27631859
Alignment:
Q  194 attccggattatgaaatccagaaacctcaagggcatttttgga 236  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  27631901 attccggattatgaaatctggaaacctcaagggcatttttgga 27631859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 192 - 234
Target Start/End: Complemental strand, 32441765 - 32441723
Alignment:
Q  192 ccattccggattatgaaatccagaaacctcaagggcatttttg 234  Q
    ||||||||||||||||||||| ||||||||||||| |||||||    
T  32441765 ccattccggattatgaaatccggaaacctcaagggtatttttg 32441723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 42660385 - 42660435
Alignment:
Q  21 ttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccg 71  Q
    ||||||||||| |||||||||||||||||||| |||| ||||| |||||||    
T  42660385 ttacaaacatgctcagaattggtgctggtgctatccggattacataatccg 42660435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 6228344 - 6228307
Alignment:
Q  199 ggattatgaaatccagaaacctcaagggcatttttgga 236  Q
    |||||||||||||| |||||||||||||||||||||||    
T  6228344 ggattatgaaatccggaaacctcaagggcatttttgga 6228307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 55052832 - 55052875
Alignment:
Q  192 ccattccggattatgaaatccagaaacctcaagggcatttttgga 236  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||    
T  55052832 ccattccggattatgaaatccggaaa-ctcaagggcatttttgga 55052875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 50392453 - 50392496
Alignment:
Q  35 agaattggtgctggtgctgtccgaattacgtaatccggattgca 78  Q
    |||||||||| |||||||||| | ||||||||||||||||||||    
T  50392453 agaattggtgatggtgctgtctggattacgtaatccggattgca 50392496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 236
Target Start/End: Original strand, 3703469 - 3703507
Alignment:
Q  198 cggattatgaaatccagaaacctcaagggcatttttgga 236  Q
    ||||||||||||||| ||||| |||||||||||||||||    
T  3703469 cggattatgaaatccggaaacttcaagggcatttttgga 3703507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 23524418 - 23524460
Alignment:
Q  194 attccggattatgaaatccagaaacctcaagggcatttttgga 236  Q
    |||||||||||| |||||  |||||||||||||||||||||||    
T  23524418 attccggattataaaatctggaaacctcaagggcatttttgga 23524460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 41412742 - 41412706
Alignment:
Q  200 gattatgaaatccagaaacctcaagggcatttttgga 236  Q
    |||||||||||||| |||||||||| |||||||||||    
T  41412742 gattatgaaatccaaaaacctcaagagcatttttgga 41412706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 9573 - 9680
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||| |    
T  9573 aaaaagggtgttcagggggttttcggattatgtaatccggaaacatcatgtaacgcgtcctattttttgaagtttccggattacaaaattcggaaaaacc 9672  T
Q  185 cgtaactc 192  Q
    ||||||||    
T  9673 cgtaactc 9680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 86 - 184
Target Start/End: Original strand, 142039 - 142138
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  142039 aaaaagggtgtttagggggtttccggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttccggattacaaaatctggaaaaatc 142138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 86 - 192
Target Start/End: Complemental strand, 23205 - 23098
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaatc 184  Q
    ||||| |||||||||||||||| | |||||| ||||||||||||||||||||| || ||||| |||||||||||||||||||| ||||| ||||||||||    
T  23205 aaaaaaggtgtttagggggtttccggattatataatccggaaacatcatgtaatgcaccctattttttgaagtttccggattataaaattcggaaaaatc 23106  T
Q  185 cgtaactc 192  Q
    ||| ||||    
T  23105 cgttactc 23098  T

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Target: scaffold0508 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 86 - 182
Target Start/End: Original strand, 3471 - 3568
Alignment:
Q  86 aaaaatggtgtttagggggttttcagattatgtaatccggaaacatcatgtaacgcgcccta-tttttgaagtttccggattacaaaatccggaaaaa 182  Q
    ||||| |||||||| ||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||| || |||||    
T  3471 aaaaagggtgtttatggggtttccggattatgtaatccggaaacatcatgtaacgcgccctattttttgaagtttctagattacaaaattcgaaaaaa 3568  T

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Target: scaffold0016 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 205814 - 205873
Alignment:
Q  19 tgttacaaacatgttcagaattggtgctggtgctgtccgaattacgtaatccggattgca 78  Q
    |||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||    
T  205814 tgttacaaacatgttcagaattggtgctggtgatgtctggattacgtaatccggattgca 205873  T

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