View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18970_low_3 (Length: 378)
Name: NF18970_low_3
Description: NF18970
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18970_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 313; Significance: 1e-176; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 18 - 338
Target Start/End: Complemental strand, 9197937 - 9197617
Alignment:
| Q |
18 |
gttctgtctggaccggtttccttgccggagaaggaagtgattttgttcctttcacatggtcaagagaggagaagcattaatgtgcttcttggtttgcccg |
117 |
Q |
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| T |
9197937 |
gttctgtctggaccggtttccttgccggagaaggaagtgattttgttcctttcacatggtcaagagaggagaagcattaatgtgcttcttggtttgcctg |
9197838 |
T |
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| Q |
118 |
ctcctgtcatgaagaccttccaagatttaatgcagatataggataattctattattatgtttcatatggttgtgttattttttattatatggttctgtta |
217 |
Q |
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| T |
9197837 |
ctcctgtcatgaagatcttccaagatttaatgcagatataggataattctattattatgtttcatatggttgtgttattttttattatatggttctgtta |
9197738 |
T |
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| Q |
218 |
tcatttcttgaaagagaagtgagttatgtttatgaatttatttgtagtaagcaataactaaggtcttctttatattgttgattgttgatgaaattagttt |
317 |
Q |
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| T |
9197737 |
tcatttcttgaaagagaagtgagttatgtttatgaatttatttgtagtaagcaataactaaggtcttctttatattgttgattgttgatgaaattagttt |
9197638 |
T |
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| Q |
318 |
atatggaaatacattctatag |
338 |
Q |
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| T |
9197637 |
atatggaaatacattctatag |
9197617 |
T |
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