View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18970_low_5 (Length: 202)

Name: NF18970_low_5
Description: NF18970
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18970_low_5
NF18970_low_5
[»] chr7 (46 HSPs)
chr7 (1-202)||(969337-969538)
chr7 (55-129)||(8001478-8001552)
chr7 (55-129)||(19404689-19404763)
chr7 (55-129)||(22743029-22743103)
chr7 (101-202)||(32521887-32521986)
chr7 (100-200)||(1448789-1448887)
chr7 (55-202)||(24069326-24069485)
chr7 (95-202)||(35667186-35667291)
chr7 (7-129)||(39171464-39171596)
chr7 (123-202)||(38880590-38880669)
chr7 (55-129)||(12141240-12141314)
chr7 (55-129)||(24350771-24350845)
chr7 (55-129)||(35133032-35133106)
chr7 (127-191)||(2407176-2407240)
chr7 (123-202)||(3224422-3224501)
chr7 (137-188)||(26623816-26623867)
chr7 (55-126)||(48930795-48930866)
chr7 (138-200)||(14627874-14627936)
chr7 (55-121)||(28044688-28044754)
chr7 (55-125)||(28476316-28476385)
chr7 (125-195)||(29617714-29617784)
chr7 (55-129)||(34899539-34899613)
chr7 (55-129)||(35665067-35665141)
chr7 (56-202)||(41553367-41553525)
chr7 (57-129)||(5078348-5078420)
chr7 (137-189)||(5348618-5348670)
chr7 (138-202)||(20116600-20116664)
chr7 (138-202)||(23786593-23786657)
chr7 (138-202)||(46339072-46339136)
chr7 (100-202)||(6002039-6002139)
chr7 (139-170)||(11343842-11343873)
chr7 (100-202)||(22927829-22927929)
chr7 (123-202)||(41553791-41553870)
chr7 (100-202)||(42408380-42408480)
chr7 (125-188)||(48061436-48061499)
chr7 (123-202)||(3394474-3394555)
chr7 (55-129)||(9450069-9450143)
chr7 (55-129)||(47590396-47590470)
chr7 (55-129)||(48316744-48316818)
chr7 (137-202)||(31235786-31235851)
chr7 (55-120)||(40993251-40993316)
chr7 (142-202)||(32684686-32684746)
chr7 (138-202)||(34773729-34773793)
chr7 (133-200)||(35665157-35665225)
chr7 (138-202)||(46818411-46818475)
chr7 (138-202)||(46822033-46822097)
[»] chr6 (33 HSPs)
chr6 (55-202)||(26588404-26588563)
chr6 (55-202)||(1933624-1933783)
chr6 (55-126)||(127756-127827)
chr6 (55-129)||(1523492-1523566)
chr6 (55-202)||(8102721-8102884)
chr6 (55-202)||(34185625-34185784)
chr6 (142-202)||(22571473-22571533)
chr6 (55-127)||(31852125-31852197)
chr6 (57-129)||(32191664-32191736)
chr6 (55-202)||(528282-528441)
chr6 (55-129)||(546115-546189)
chr6 (55-129)||(3913506-3913580)
chr6 (55-129)||(9380107-9380181)
chr6 (55-129)||(29255378-29255452)
chr6 (55-202)||(31296819-31296978)
chr6 (57-202)||(7976121-7976268)
chr6 (138-202)||(25064254-25064318)
chr6 (100-202)||(12652962-12653062)
chr6 (58-129)||(30493616-30493687)
chr6 (100-202)||(35001608-35001708)
chr6 (55-129)||(14801911-14801985)
chr6 (55-129)||(27097574-27097648)
chr6 (55-125)||(30776751-30776821)
chr6 (138-202)||(8496985-8497049)
chr6 (138-202)||(23947313-23947377)
chr6 (138-202)||(25337588-25337652)
chr6 (100-202)||(16419176-16419276)
chr6 (123-202)||(28981176-28981255)
chr6 (55-129)||(606288-606362)
chr6 (55-129)||(3355201-3355275)
chr6 (55-129)||(12170552-12170626)
chr6 (137-202)||(30493531-30493596)
chr6 (138-202)||(7881097-7881161)
[»] chr4 (67 HSPs)
chr4 (55-200)||(52944331-52944488)
chr4 (123-202)||(22300867-22300946)
chr4 (55-129)||(47320344-47320418)
chr4 (123-202)||(18048901-18048980)
chr4 (123-202)||(28857420-28857499)
chr4 (55-129)||(4142684-4142758)
chr4 (57-200)||(22038736-22038891)
chr4 (55-129)||(32766617-32766691)
chr4 (3-129)||(21686112-21686248)
chr4 (139-202)||(36161729-36161792)
chr4 (123-202)||(51888223-51888302)
chr4 (113-202)||(868192-868279)
chr4 (55-129)||(36194812-36194885)
chr4 (55-124)||(2520887-2520956)
chr4 (141-202)||(43853460-43853521)
chr4 (142-202)||(10389753-10389813)
chr4 (139-202)||(2624526-2624589)
chr4 (100-202)||(4643888-4643988)
chr4 (123-202)||(6155238-6155317)
chr4 (113-191)||(7008977-7009053)
chr4 (123-202)||(31359759-31359838)
chr4 (55-122)||(31891219-31891286)
chr4 (62-202)||(35395619-35395761)
chr4 (123-194)||(36204396-36204467)
chr4 (55-126)||(43853549-43853620)
chr4 (100-202)||(53616609-53616709)
chr4 (55-129)||(9145823-9145897)
chr4 (55-129)||(22611286-22611360)
chr4 (55-129)||(24098999-24099073)
chr4 (55-129)||(26633603-26633677)
chr4 (55-129)||(36161814-36161888)
chr4 (55-129)||(53811131-53811205)
chr4 (137-202)||(35261221-35261286)
chr4 (123-199)||(2069592-2069668)
chr4 (127-187)||(12199709-12199769)
chr4 (114-202)||(21090182-21090270)
chr4 (138-202)||(25273913-25273977)
chr4 (100-199)||(35964934-35965031)
chr4 (138-202)||(43444423-43444487)
chr4 (55-123)||(43510305-43510373)
chr4 (138-202)||(47417692-47417756)
chr4 (138-202)||(50766507-50766571)
chr4 (55-127)||(54021965-54022037)
chr4 (146-202)||(55227996-55228052)
chr4 (100-202)||(9528836-9528936)
chr4 (123-202)||(9643406-9643485)
chr4 (1-129)||(9643491-9643617)
chr4 (139-202)||(29965665-29965728)
chr4 (123-190)||(48351198-48351265)
chr4 (100-202)||(49410253-49410353)
chr4 (139-202)||(51318015-51318078)
chr4 (55-129)||(2069512-2069586)
chr4 (100-190)||(7393301-7393390)
chr4 (55-129)||(10258828-10258902)
chr4 (55-129)||(13634218-13634292)
chr4 (138-188)||(22611215-22611265)
chr4 (123-169)||(27651995-27652041)
chr4 (55-89)||(51888143-51888177)
chr4 (55-129)||(56040578-56040652)
chr4 (138-187)||(19853539-19853588)
chr4 (55-128)||(21662541-21662614)
chr4 (55-128)||(21671305-21671378)
chr4 (138-202)||(9283941-9284005)
chr4 (138-202)||(20569285-20569349)
chr4 (55-119)||(31359678-31359742)
chr4 (138-202)||(31381667-31381731)
chr4 (138-202)||(43154009-43154073)
[»] chr1 (55 HSPs)
chr1 (55-197)||(44543279-44543432)
chr1 (55-200)||(47132906-47133063)
chr1 (55-190)||(15492313-15492447)
chr1 (55-201)||(24582953-24583110)
chr1 (123-202)||(12635171-12635250)
chr1 (55-129)||(36775642-36775716)
chr1 (58-202)||(49626915-49627070)
chr1 (125-202)||(31692481-31692557)
chr1 (56-202)||(39987411-39987555)
chr1 (55-187)||(44915655-44915799)
chr1 (58-128)||(10776396-10776466)
chr1 (3-127)||(48750273-48750407)
chr1 (123-200)||(16262864-16262941)
chr1 (55-168)||(31984208-31984321)
chr1 (138-202)||(35584613-35584677)
chr1 (123-187)||(40163509-40163573)
chr1 (123-202)||(6217839-6217918)
chr1 (123-202)||(34528731-34528810)
chr1 (55-129)||(19060995-19061069)
chr1 (61-127)||(26535437-26535503)
chr1 (55-129)||(27580060-27580134)
chr1 (55-129)||(43412460-43412534)
chr1 (57-129)||(13144746-13144818)
chr1 (55-159)||(31317794-31317896)
chr1 (58-127)||(41994515-41994584)
chr1 (138-202)||(799813-799877)
chr1 (146-202)||(9341728-9341784)
chr1 (138-202)||(9687199-9687263)
chr1 (22-129)||(16262947-16263063)
chr1 (55-123)||(37720081-37720149)
chr1 (138-202)||(39927549-39927613)
chr1 (122-202)||(41994428-41994508)
chr1 (100-202)||(9172512-9172612)
chr1 (100-202)||(9180494-9180594)
chr1 (55-126)||(9341815-9341886)
chr1 (100-202)||(51868604-51868704)
chr1 (55-129)||(7337595-7337669)
chr1 (55-129)||(21947550-21947624)
chr1 (55-129)||(32395084-32395158)
chr1 (55-129)||(32679073-32679147)
chr1 (138-200)||(34519156-34519218)
chr1 (55-129)||(35484323-35484397)
chr1 (55-129)||(45415644-45415718)
chr1 (138-191)||(7312100-7312153)
chr1 (55-116)||(34413024-34413085)
chr1 (125-186)||(45789558-45789619)
chr1 (100-200)||(50272099-50272197)
chr1 (56-129)||(51916599-51916671)
chr1 (142-202)||(5701281-5701341)
chr1 (56-202)||(7342744-7342889)
chr1 (138-202)||(19715890-19715954)
chr1 (138-202)||(28035161-28035225)
chr1 (138-202)||(30879098-30879161)
chr1 (55-127)||(32873796-32873868)
chr1 (138-194)||(40646700-40646756)
[»] scaffold0347 (1 HSPs)
scaffold0347 (55-202)||(6028-6187)
[»] chr8 (58 HSPs)
chr8 (55-202)||(29617204-29617363)
chr8 (57-202)||(1236629-1236785)
chr8 (57-202)||(1239329-1239485)
chr8 (123-202)||(5333429-5333508)
chr8 (55-129)||(15344393-15344467)
chr8 (55-129)||(15433458-15433532)
chr8 (55-129)||(15524762-15524836)
chr8 (55-129)||(39657539-39657613)
chr8 (55-129)||(42046306-42046380)
chr8 (7-129)||(43833868-43834000)
chr8 (58-129)||(21237875-21237946)
chr8 (55-129)||(18890629-18890703)
chr8 (55-128)||(34609922-34609995)
chr8 (123-202)||(3240380-3240459)
chr8 (123-202)||(8443521-8443600)
chr8 (55-129)||(7198125-7198199)
chr8 (55-129)||(14585762-14585836)
chr8 (55-129)||(20553171-20553245)
chr8 (55-129)||(20559674-20559748)
chr8 (55-129)||(20571236-20571310)
chr8 (59-129)||(37971368-37971438)
chr8 (137-202)||(44099928-44099993)
chr8 (138-202)||(4808989-4809053)
chr8 (138-202)||(35580482-35580546)
chr8 (123-198)||(8981167-8981242)
chr8 (143-202)||(11196914-11196973)
chr8 (55-129)||(471096-471170)
chr8 (55-129)||(5046838-5046912)
chr8 (55-129)||(14916118-14916191)
chr8 (140-202)||(21237790-21237852)
chr8 (55-129)||(31013538-31013612)
chr8 (125-191)||(39450552-39450618)
chr8 (55-128)||(9637339-9637412)
chr8 (124-193)||(24099266-24099335)
chr8 (138-202)||(9619352-9619416)
chr8 (95-202)||(34611829-34611934)
chr8 (138-202)||(43192341-43192405)
chr8 (100-202)||(23851453-23851553)
chr8 (100-202)||(28239858-28239958)
chr8 (123-202)||(34609833-34609911)
chr8 (100-202)||(42447986-42448086)
chr8 (55-129)||(8826296-8826370)
chr8 (55-129)||(16247153-16247227)
chr8 (138-188)||(17693639-17693689)
chr8 (55-129)||(27498296-27498369)
chr8 (55-129)||(29939385-29939459)
chr8 (125-202)||(39646198-39646276)
chr8 (55-129)||(40619003-40619077)
chr8 (55-129)||(41896602-41896676)
chr8 (30-129)||(10331176-10331272)
chr8 (123-200)||(14916197-14916274)
chr8 (137-202)||(15344309-15344373)
chr8 (137-202)||(15433374-15433438)
chr8 (137-202)||(15524678-15524742)
chr8 (138-202)||(2655895-2655959)
chr8 (55-119)||(5333524-5333588)
chr8 (138-202)||(11464196-11464260)
chr8 (138-202)||(36532922-36532986)
[»] chr5 (35 HSPs)
chr5 (55-202)||(8088144-8088302)
chr5 (55-129)||(19103399-19103473)
chr5 (55-129)||(39567352-39567426)
chr5 (81-191)||(41214604-41214714)
chr5 (55-128)||(14211310-14211383)
chr5 (139-202)||(36344487-36344550)
chr5 (123-202)||(38110960-38111039)
chr5 (55-129)||(13422015-13422089)
chr5 (100-202)||(3271361-3271461)
chr5 (139-202)||(10332576-10332639)
chr5 (100-202)||(34881738-34881838)
chr5 (55-129)||(2979238-2979312)
chr5 (55-129)||(6216980-6217054)
chr5 (55-129)||(28540838-28540912)
chr5 (55-129)||(41630584-41630658)
chr5 (143-202)||(30298228-30298287)
chr5 (100-202)||(41184399-41184499)
chr5 (55-129)||(10722843-10722917)
chr5 (55-129)||(26878040-26878114)
chr5 (55-129)||(31391685-31391759)
chr5 (138-199)||(31314728-31314789)
chr5 (56-202)||(4954012-4954157)
chr5 (7-129)||(13007311-13007443)
chr5 (138-202)||(16981310-16981374)
chr5 (142-202)||(43261818-43261878)
chr5 (100-202)||(7150294-7150394)
chr5 (80-170)||(11192422-11192510)
chr5 (123-170)||(31364500-31364547)
chr5 (55-129)||(34945475-34945549)
chr5 (138-188)||(35850810-35850860)
chr5 (55-129)||(38597879-38597953)
chr5 (142-187)||(16758552-16758597)
chr5 (137-202)||(28235605-28235670)
chr5 (138-202)||(2057833-2057897)
chr5 (138-190)||(7886933-7886985)
[»] chr3 (51 HSPs)
chr3 (55-129)||(29922139-29922213)
chr3 (55-129)||(29971292-29971366)
chr3 (55-129)||(53807790-53807864)
chr3 (123-190)||(4821816-4821883)
chr3 (4-129)||(51923809-51923944)
chr3 (123-202)||(4396346-4396425)
chr3 (123-202)||(12947286-12947365)
chr3 (55-129)||(42460831-42460905)
chr3 (55-129)||(51303575-51303649)
chr3 (56-200)||(31794088-31794230)
chr3 (11-129)||(8914794-8914922)
chr3 (138-202)||(36734687-36734751)
chr3 (55-129)||(21313118-21313192)
chr3 (123-202)||(35175401-35175480)
chr3 (55-129)||(628855-628929)
chr3 (55-129)||(14859572-14859646)
chr3 (55-129)||(16235508-16235582)
chr3 (55-129)||(43488522-43488596)
chr3 (55-129)||(53508308-53508382)
chr3 (102-202)||(21488106-21488204)
chr3 (138-202)||(42719532-42719596)
chr3 (55-95)||(51487211-51487251)
chr3 (123-202)||(29239340-29239419)
chr3 (55-129)||(7448846-7448920)
chr3 (55-129)||(7456988-7457062)
chr3 (55-129)||(20464902-20464976)
chr3 (55-129)||(35175486-35175560)
chr3 (55-129)||(50194267-50194341)
chr3 (55-128)||(37040852-37040925)
chr3 (123-200)||(44805029-44805106)
chr3 (138-202)||(12116113-12116177)
chr3 (30-129)||(23799808-23799916)
chr3 (138-202)||(35499193-35499257)
chr3 (138-202)||(46934657-46934721)
chr3 (55-127)||(48199861-48199933)
chr3 (138-202)||(49552219-49552283)
chr3 (100-202)||(22803037-22803137)
chr3 (139-202)||(26739385-26739448)
chr3 (55-129)||(10233152-10233226)
chr3 (55-129)||(12050580-12050654)
chr3 (55-129)||(19339258-19339331)
chr3 (55-129)||(20608831-20608905)
chr3 (55-129)||(27706158-27706232)
chr3 (55-129)||(36461363-36461437)
chr3 (55-129)||(52923049-52923123)
chr3 (55-129)||(53099872-53099946)
chr3 (137-202)||(29922054-29922119)
chr3 (137-202)||(29971207-29971272)
chr3 (127-187)||(20608915-20608975)
chr3 (143-191)||(22290950-22290998)
chr3 (138-202)||(25162451-25162515)
[»] chr2 (53 HSPs)
chr2 (55-202)||(14423333-14423492)
chr2 (100-202)||(18113891-18113991)
chr2 (65-202)||(32448562-32448710)
chr2 (55-129)||(10237149-10237223)
chr2 (55-129)||(14955622-14955696)
chr2 (55-202)||(17249080-17249238)
chr2 (126-200)||(24461450-24461527)
chr2 (123-202)||(29574641-29574720)
chr2 (55-129)||(1421769-1421843)
chr2 (55-129)||(6436700-6436774)
chr2 (55-129)||(10929758-10929832)
chr2 (55-129)||(29279503-29279577)
chr2 (128-202)||(34128702-34128776)
chr2 (125-189)||(4264493-4264557)
chr2 (138-202)||(9986337-9986401)
chr2 (138-202)||(26025405-26025469)
chr2 (3-129)||(33585606-33585742)
chr2 (100-202)||(7015670-7015770)
chr2 (139-202)||(30420700-30420763)
chr2 (55-129)||(31210540-31210614)
chr2 (139-202)||(37614121-37614184)
chr2 (55-129)||(3309038-3309112)
chr2 (138-188)||(4904173-4904223)
chr2 (55-129)||(17994663-17994737)
chr2 (55-202)||(23933552-23933711)
chr2 (101-202)||(34599009-34599108)
chr2 (55-129)||(37994377-37994451)
chr2 (100-200)||(3269070-3269168)
chr2 (100-200)||(3269629-3269727)
chr2 (100-200)||(3270188-3270286)
chr2 (138-202)||(459269-459333)
chr2 (138-202)||(2808467-2808531)
chr2 (137-202)||(6358898-6358965)
chr2 (30-129)||(25508967-25509075)
chr2 (138-202)||(27249146-27249210)
chr2 (138-202)||(36234030-36234094)
chr2 (31-129)||(4778846-4778953)
chr2 (100-202)||(27949448-27949548)
chr2 (125-188)||(28871803-28871866)
chr2 (128-198)||(11812695-11812765)
chr2 (55-129)||(16376032-16376106)
chr2 (91-129)||(25087130-25087168)
chr2 (55-129)||(28533887-28533961)
chr2 (55-129)||(31128713-31128787)
chr2 (138-188)||(38445188-38445238)
chr2 (55-129)||(41694714-41694788)
chr2 (100-129)||(3240979-3241008)
chr2 (55-124)||(36943054-36943123)
chr2 (138-202)||(3725202-3725266)
chr2 (138-202)||(6173654-6173718)
chr2 (55-119)||(7646581-7646645)
chr2 (57-129)||(19028849-19028921)
chr2 (123-195)||(37994294-37994366)
[»] scaffold0009 (1 HSPs)
scaffold0009 (55-192)||(58020-58169)
[»] scaffold0039 (2 HSPs)
scaffold0039 (55-127)||(93192-93264)
scaffold0039 (138-202)||(93104-93169)
[»] scaffold0042 (1 HSPs)
scaffold0042 (55-202)||(92428-92587)
[»] scaffold0017 (1 HSPs)
scaffold0017 (55-129)||(32679-32753)
[»] scaffold0015 (2 HSPs)
scaffold0015 (55-129)||(3973-4046)
scaffold0015 (140-192)||(4081-4133)
[»] scaffold0888 (1 HSPs)
scaffold0888 (55-129)||(1610-1684)
[»] scaffold0128 (1 HSPs)
scaffold0128 (55-129)||(36908-36982)
[»] scaffold0095 (1 HSPs)
scaffold0095 (125-191)||(9396-9462)
[»] scaffold0884 (1 HSPs)
scaffold0884 (11-129)||(1851-1979)
[»] scaffold0064 (1 HSPs)
scaffold0064 (90-129)||(19041-19080)
[»] scaffold0022 (1 HSPs)
scaffold0022 (92-202)||(83389-83497)
[»] scaffold0121 (1 HSPs)
scaffold0121 (55-129)||(31206-31280)
[»] scaffold0264 (1 HSPs)
scaffold0264 (161-202)||(20414-20455)
[»] scaffold0426 (1 HSPs)
scaffold0426 (138-202)||(6323-6387)
[»] scaffold0002 (1 HSPs)
scaffold0002 (138-202)||(453950-454014)


Alignment Details
Target: chr7 (Bit Score: 146; Significance: 4e-77; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 969337 - 969538
Alignment:
Q  1 taaatatgcaaacaaactcatacactcatgttaataacatacaacggcaaaatgaatatgataaaatctaaatcaccggaatactcatgtttctgaatat 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||  ||||||||||| || ||||| |    
T  969337 taaatatgcaaacaaactcatacacccatgttaataacatacaacggtaaaataaatatgataaaatctaaatcactagaatactcatgcttatgaatct 969436  T
Q  101 gcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaa 200  Q
    |||| |||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  969437 gcaatattgacgtccaaatcattaattgactaaagatgatttttcaatatgaaccaaacaaacaccgcaataagacgcaaaatcaaacaacgccgcaaaa 969536  T
Q  201 ga 202  Q
    ||    
T  969537 ga 969538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 8001478 - 8001552
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||||||| |||| |||||| |||||||||| ||| |||| |||||| |||||||||||||||||| ||||    
T  8001478 aatatgataaaacctaagtcaccgaaatactcatgattccgaatctgcaacgttgacgtccaaatcattgcttga 8001552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 19404689 - 19404763
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||||||| |||| | |||||||||| ||| | || ||||||||||||| ||||||||||||||||    
T  19404689 aatatgataaaatctaagtcactgaaatactcatgcttccggatctgcaacattgacgcccaaatcattgattga 19404763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 22743103 - 22743029
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||| |||||||||||||| ||||||||||| ||||| || |||||| ||||||  |||||||||||||||    
T  22743103 aatatgatgaaatctaaatcaccagaatactcatgcttctggatctgcaacgttgacgctcaaatcattgattga 22743029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 202
Target Start/End: Original strand, 32521887 - 32521986
Alignment:
Q  101 gcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaa 200  Q
    |||||||||| | | ||||| |||||||| |||   ||||||||||||||||| ||||  |||||| ||| |||||| ||||||||||||||||||||||    
T  32521887 gcaacattgatgcctaaatctttgattgaataat--tgatctttcaatatgaatcaaatgaacaccacaacaaaacggaaaatcaaacaacgccgcacaa 32521984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 100 - 200
Target Start/End: Original strand, 1448789 - 1448887
Alignment:
Q  100 tgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcaca 199  Q
    |||||| ||||| |||||||| |||||||| ||| ||  ||||||||||||||| ||||  |||||||||| || |||  ||||||||||||||||||||    
T  1448789 tgcaacgttgacatccaaatctttgattgaataatgg--atctttcaatatgaatcaaatgaacaccgcaagaagacgagaaatcaaacaacgccgcaca 1448886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 55 - 202
Target Start/End: Original strand, 24069326 - 24069485
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga--ct----------aaaggtgatct 142  Q
    ||||||||||||||||||||||| |||| |||||| ||| |  | |||||| ||||||| |||||||||||||||  ||           ||| |||| |    
T  24069326 aatatgataaaatctaaatcaccagaatcctcatgcttccgggtctgcaacgttgacgttcaaatcattgattgaacctgtgattgatcgaagctgatat 24069425  T
Q  143 ttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||||| ||||| |||||||||| || |||| |||||||| ||||||||||||||    
T  24069426 ttcaatatgaatcaaacgaacaccgcaacaatacgccaaatcaaaaaacgccgcacaaga 24069485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 202
Target Start/End: Original strand, 35667186 - 35667291
Alignment:
Q  95 gaatatgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgcc 194  Q
    |||| |||||||||||||  |||||| |||||||| |||  |  ||||||||||||||| ||||  |||||||||| || ||| ||||||||| ||||||    
T  35667186 gaatctgcaacattgacgctcaaatcgttgattgaataatcg--atctttcaatatgaatcaaatgaacaccgcaagaagacggaaaatcaaaaaacgcc 35667283  T
Q  195 gcacaaga 202  Q
    ||||||||    
T  35667284 gcacaaga 35667291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 129
Target Start/End: Original strand, 39171464 - 39171596
Alignment:
Q  7 tgcaaacaaactcata-cactcatgttaataacatacaacggcaaaatg---------aatatgataaaatctaaatcaccggaatactcatgtttctga 96  Q
    |||||||||||||||| ||| || ||||||| |||||||||||||||||         |||||||||||| |||| |||||| ||||| |||| ||| |     
T  39171464 tgcaaacaaactcatagcacccaagttaatagcatacaacggcaaaatgcctacaaataatatgataaaacctaagtcaccgaaatacccatgcttccgg 39171563  T
Q  97 atatgcaacattgacgtccaaatcattgattga 129  Q
    || |||||| |||||||||||||||||| ||||    
T  39171564 atctgcaacgttgacgtccaaatcattgcttga 39171596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 123 - 202
Target Start/End: Original strand, 38880590 - 38880669
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||| ||| ||||||||||||| ||||||||| |||||||||| || | ||||||||||||| || || ||||||    
T  38880590 tgattgactgaagctgatctttcaataagaaccaaacgaacaccgcaacaagatgcaaaatcaaacagcgtcgtacaaga 38880669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 12141240 - 12141314
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||||||| |||||| ||||| |||| ||| | || |||||| |||||||||||||||||| ||||    
T  12141240 aatatgataaaatctaagtcaccgaaatacccatgcttccggatctgcaacgttgacgtccaaatcattggttga 12141314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 24350771 - 24350845
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||| |||| ||||||||| |||||| |||| ||||| || |||||| |||||| ||||||||||||||||    
T  24350771 aatatgatgaaatttaaatcaccagaatacccatgcttctggatctgcaacgttgacgcccaaatcattgattga 24350845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 35133106 - 35133032
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||| |||||||||||||  ||||||||||| || || || |||||| |||||| ||||||||||||||||    
T  35133106 aatatgatgaaatctaaatcactagaatactcatgcttttggatctgcaacgttgacgcccaaatcattgattga 35133032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 2407240 - 2407176
Alignment:
Q  127 tgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaac 191  Q
    ||||||||| |||| ||| |||||||||||||||||||| |||| ||||| |||||| |||||||    
T  2407240 tgactaaagttgatattttaatatgaaccaaacaaacactgcaacaaaacacaaaattaaacaac 2407176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 202
Target Start/End: Original strand, 3224422 - 3224501
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||| ||| ||||| ||||||||||||||||| |||| ||||| ||||||  |||||||| || | |||||||||    
T  3224422 tgattgactgaagttgatccttcaatatgaaccaaacgaacatcgcaacaaaacgtgaaatcaaataatgtcgcacaaga 3224501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 26623816 - 26623867
Alignment:
Q  137 tgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaac 188  Q
    ||||||||||||| |||||||||||||||||||| || | ||||||||||||    
T  26623816 tgatctttcaataggaaccaaacaaacaccgcaacaagatgcaaaatcaaac 26623867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 48930866 - 48930795
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgat 126  Q
    |||||||| |||||||||||||| ||||||  ||||||||| || |||||| |||||  |||||||||||||    
T  48930866 aatatgatgaaatctaaatcaccagaataccaatgtttctggatctgcaacgttgacacccaaatcattgat 48930795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 14627874 - 14627936
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaa 200  Q
    |||||||||||||||| |||| |||||||| | ||| |||  |||||||||||||||||||||    
T  14627874 gatctttcaatatgaatcaaataaacaccgtactaagacgagaaatcaaacaacgccgcacaa 14627936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 121
Target Start/End: Original strand, 28044688 - 28044754
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatca 121  Q
    |||||||||||| ||||||||||| ||||| |||||||| | || |||||| ||||||| |||||||    
T  28044688 aatatgataaaacctaaatcaccgaaatacccatgtttccggatctgcaacgttgacgttcaaatca 28044754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 28476385 - 28476316
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattga 125  Q
    ||||||||||||||||||||||| |||||| |||  ||||| || |||||| |||||| ||||||||||||    
T  28476385 aatatgataaaatctaaatcacc-gaatacccatacttctggatctgcaacgttgacgcccaaatcattga 28476316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 125 - 195
Target Start/End: Original strand, 29617714 - 29617784
Alignment:
Q  125 attgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccg 195  Q
    |||| |||||| ||||||||||||| ||| |||||||||||  ||| || |||| ||||||||||||||||    
T  29617714 attgtctaaagttgatctttcaatacgaatcaaacaaacactacaacaagacgcgaaatcaaacaacgccg 29617784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 34899539 - 34899613
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||  ||| |||||| ||||| |||| ||| |||| |||||| |||||||||||||||||| ||||    
T  34899539 aatatgataaaacttaagtcaccgaaatacccatgcttccgaatttgcaacgttgacgtccaaatcattggttga 34899613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 35665067 - 35665141
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||||||||||||   ||||| |||| || ||  | |||||||||||||| |||||||||||||||    
T  35665067 aatatgataaaatctaaatcactaaaatacacatgcttatgggtctgcaacattgacgttcaaatcattgattga 35665141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 202
Target Start/End: Original strand, 41553367 - 41553525
Alignment:
Q  56 atatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcat------------tgattgactaaaggtgatctt 143  Q
    ||||||||||||||||||||||  ||||   ||||||| | || |||||| ||||||||||||||||            ||||||||| ||  |||||||    
T  41553367 atatgataaaatctaaatcaccaaaatatctatgtttccggatctgcaacgttgacgtccaaatcattaactgaatatgtgattgactgaaattgatctt 41553466  T
Q  144 tcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||||  || || |||| |||||||| |||| | |||||||    
T  41553467 tcaatatgaaccaaacgaacaccataacaagacgcgaaatcaaataacgtcacacaaga 41553525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 5078348 - 5078420
Alignment:
Q  57 tatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||||||||| |  |||||||||| ||  | ||||||||  ||||||||||||||||| |||||    
T  5078348 tatgataaaatctaaatcatcaaaatactcatgctttcggatatgcaaagttgacgtccaaatcatttattga 5078420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 5348618 - 5348670
Alignment:
Q  137 tgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaaca 189  Q
    ||||||||||||| ||||||||| ||||||||||||| |||  ||||||||||    
T  5348618 tgatctttcaataggaaccaaacgaacaccgcaataagacgataaatcaaaca 5348670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 20116664 - 20116600
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  |||||||||| || |||  ||||||||||||| |||||||||    
T  20116664 gatctttcaatatgaatcaaatgaacaccgcaagaagacggtaaatcaaacaacgacgcacaaga 20116600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 23786657 - 23786593
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  |||||||||| || |||  |||||||||||||||||| ||||    
T  23786657 gatctttcaatatgaatcaaatgaacaccgcaagaagacgagaaatcaaacaacgccgcagaaga 23786593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 46339136 - 46339072
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  ||||||| |  || ||| ||||||||||||||||||||||||    
T  46339136 gatctttcaatatgaatcaaatgaacaccgtacgaagacggaaaatcaaacaacgccgcacaaga 46339072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 202
Target Start/End: Complemental strand, 6002139 - 6002039
Alignment:
Q  100 tgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcaca 199  Q
    |||||| ||||||  |||||| |||||||| |||   ||||||||||||||||| ||||  |||||||| |  | |||  ||||||||||||||||||||    
T  6002139 tgcaacgttgacgctcaaatctttgattgaataat--tgatctttcaatatgaatcaaatgaacaccgcgacgatacgagaaatcaaacaacgccgcaca 6002042  T
Q  200 aga 202  Q
    |||    
T  6002041 aga 6002039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 139 - 170
Target Start/End: Complemental strand, 11343873 - 11343842
Alignment:
Q  139 atctttcaatatgaaccaaacaaacaccgcaa 170  Q
    ||||||||||||||||||||||||||||||||    
T  11343873 atctttcaatatgaaccaaacaaacaccgcaa 11343842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 202
Target Start/End: Original strand, 22927829 - 22927929
Alignment:
Q  100 tgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcaca 199  Q
    |||||| |||||||||||||| |||||||| |||  |  ||||||||||| |||  |||  |||||||||| || |||  ||| ||||||||||||||||    
T  22927829 tgcaacgttgacgtccaaatctttgattgaataatcg--atctttcaataggaataaaatgaacaccgcaagaagacgggaaagcaaacaacgccgcaca 22927926  T
Q  200 aga 202  Q
    |||    
T  22927927 aga 22927929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 123 - 202
Target Start/End: Original strand, 41553791 - 41553870
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||| ||  ||||||||||||||||||||||| ||||||  || || |||| |||||||| |||| | |||||||    
T  41553791 tgattgactgaaattgatctttcaatatgaaccaaacgaacaccataacaagacgcgaaatcaaataacgtcacacaaga 41553870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 202
Target Start/End: Complemental strand, 42408480 - 42408380
Alignment:
Q  100 tgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcaca 199  Q
    |||||| |||||| ||||||| |||||||| |||  |  ||||||||||||||| ||||  || ||||||  || ||| ||||||||||||||| |||||    
T  42408480 tgcaacgttgacgcccaaatctttgattgaataatcg--atctttcaatatgaatcaaatgaataccgcacgaagacggaaaatcaaacaacgctgcaca 42408383  T
Q  200 aga 202  Q
    |||    
T  42408382 aga 42408380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 125 - 188
Target Start/End: Complemental strand, 48061499 - 48061436
Alignment:
Q  125 attgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaac 188  Q
    ||||||||| |  |||||||||||| |||| ||||||||||||| | || ||||||||||||||    
T  48061499 attgactaatgtagatctttcaataggaactaaacaaacaccgcgacaagacgcaaaatcaaac 48061436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 202
Target Start/End: Complemental strand, 3394555 - 3394474
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgca--aaatcaaacaacgccgcacaaga 202  Q
    ||||||||| ||| ||||| |||||||||| | ||||||||||||||| || || ||  |||||||||||| || |||||||    
T  3394555 tgattgactgaagttgatcattcaatatgatctaaacaaacaccgcaagaagacacacgaaatcaaacaacaccacacaaga 3394474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 9450069 - 9450143
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||||||| |||||||||   ||||| |||| ||| | || |||||| |||||||||||||||||| ||||    
T  9450069 aatatgataaaacctaaatcactaaaatacccatgcttccggatctgcaacgttgacgtccaaatcattgcttga 9450143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 47590470 - 47590396
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||||||| |||| || ||| |||||||||| ||| | || |||||| |||||| ||||||||||| ||||    
T  47590470 aatatgataaaacctaagtcgccgaaatactcatgcttccggatgtgcaacgttgacgcccaaatcattggttga 47590396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 48316744 - 48316818
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||||||| ||||||| ||| ||||| |||| ||| | || |||| | |||||||||||||||||| ||||    
T  48316744 aatatgataaaacctaaatcgccgaaatacccatgcttccggatctgcagcgttgacgtccaaatcattgcttga 48316818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 202
Target Start/End: Original strand, 31235786 - 31235851
Alignment:
Q  137 tgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||||||||||| ||||  ||||||||||  | |||  |||||||||||||| ||||||||    
T  31235786 tgatctttcaatatgaatcaaatgaacaccgcaacgatacgagaaatcaaacaacgctgcacaaga 31235851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 120
Target Start/End: Complemental strand, 40993316 - 40993251
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatc 120  Q
    ||||||||||||  ||| |||||| ||||| |||| ||||||||||||||| ||||  ||||||||    
T  40993316 aatatgataaaacttaagtcaccgaaatacccatgcttctgaatatgcaacgttgaaatccaaatc 40993251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 32684746 - 32684686
Alignment:
Q  142 tttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||| ||||  |||||||||  || |||  |||||||||||||||||||||||    
T  32684746 tttcaatatgaatcaaatgaacaccgcacaaagacgggaaatcaaacaacgccgcacaaga 32684686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 34773793 - 34773729
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  |||||||||| || ||   |||||||||||||||||| ||||    
T  34773793 gatctttcaatatgaatcaaatgaacaccgcaagaagacaggaaatcaaacaacgccgcataaga 34773729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 35665157 - 35665225
Alignment:
Q  133 aaggtgatctttcaatatgaaccaaacaaacaccgcaataaa-acgcaaaatcaaacaacgccgcacaa 200  Q
    ||| ||||||||| ||||||| ||||| || ||||||| ||| |||| ||||||||||||| |||||||    
T  35665157 aagttgatctttcgatatgaatcaaacgaataccgcaacaaagacgccaaatcaaacaacgtcgcacaa 35665225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 46818411 - 46818475
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||| ||||||||  |||  |||||||||| || |||  |||||||||||||||||||||||    
T  46818411 gatcttttaatatgaattaaatgaacaccgcaacaatacgagaaatcaaacaacgccgcacaaga 46818475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 46822097 - 46822033
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||| |||||||| ||||  |||||||||  || |||  |||||||||||||||||||||||    
T  46822097 gatcttttaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccgcacaaga 46822033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 3e-25; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 55 - 202
Target Start/End: Original strand, 26588404 - 26588563
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcatt------------gattgactaaaggtgatct 142  Q
    |||||||||||||| ||||||||  |||||||||| ||||| || |||||| ||||| |||||||||||            |||||||| ||| ||||||    
T  26588404 aatatgataaaatcaaaatcacccaaatactcatgcttctggatttgcaacgttgacatccaaatcattaattgaatgtgtgattgactgaagttgatct 26588503  T
Q  143 ttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||||||||||| |||||||||| || |||  |||||||||||||||||||||||    
T  26588504 ttcaatatgaaccaaacgaacaccgcaacaagacgggaaatcaaacaacgccgcacaaga 26588563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 55 - 202
Target Start/End: Original strand, 1933624 - 1933783
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcat------------tgattgactaaaggtgatct 142  Q
    ||||||||||||| ||||||||| ||||| ||||||||| | || |||||| ||||||||||||||||            ||||||| | ||| ||||||    
T  1933624 aatatgataaaatataaatcaccagaataatcatgtttccggatctgcaacgttgacgtccaaatcattgattgaatctgtgattgattgaagttgatct 1933723  T
Q  143 ttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||  ||||||||||||||||||||||||  | || ||||||||||||| |||||||||||    
T  1933724 tttgatatgaaccaaacaaacaccgcaaccagacacaaaatcaaacaatgccgcacaaga 1933783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 127827 - 127756
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgat 126  Q
    |||||||||||||||||||||||| |||||||||| ||| |||| |||||| |||||| |||||||||||||    
T  127827 aatatgataaaatctaaatcaccgaaatactcatgcttccgaatctgcaacgttgacgcccaaatcattgat 127756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 1523566 - 1523492
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||||||||||||| |||||| |||| ||||| || |||||| ||||||| |||||||||||||||    
T  1523566 aatatgataaaatctaaatcaccagaatacccatgcttctggatctgcaacgttgacgttcaaatcattgattga 1523492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 202
Target Start/End: Complemental strand, 8102884 - 8102721
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcat------------tgattgactaaaggtgatct 142  Q
    ||||||||||||||||||||| | ||||| ||||||||||| || |||||| |||||| |||||||||            |||||| || ||| ||||||    
T  8102884 aatatgataaaatctaaatcatcagaatattcatgtttctggatctgcaacgttgacgcccaaatcattgaatgaatttgtgattgtctgaagctgatct 8102785  T
Q  143 ttcaatatgaaccaaacaaacaccgca----ataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||| |||||||||||||||||||    | || | || |||||||||||||||||||||||    
T  8102784 ttcaatacgaaccaaacaaacaccgcacaacaaaagatgcgaaatcaaacaacgccgcacaaga 8102721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 202
Target Start/End: Original strand, 34185625 - 34185784
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga------------ctaaaggtgatct 142  Q
    ||||||||||||||||||||||| |||||| |||| ||||   | |||||  |||||||||||||||||||||||            || ||| ||||||    
T  34185625 aatatgataaaatctaaatcaccagaatacccatgattctagttttgcaaagttgacgtccaaatcattgattgaattcgtgatcacctgaagttgatct 34185724  T
Q  143 ttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||| |||  |||||| ||| || |||||||||||||||||| | |||||||    
T  34185725 ttcaatatgaactaaaagaacaccacaacaagacgcaaaatcaaacaacgtcacacaaga 34185784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 22571533 - 22571473
Alignment:
Q  142 tttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||| |||||||| ||||||  || |||||||||||||||||||||||||||||||    
T  22571533 tttcaatattaaccaaacgaacaccataacaaaacgcaaaatcaaacaacgccgcacaaga 22571473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 31852125 - 31852197
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgatt 127  Q
    ||||||||||||| ||||||||| ||||||||||| ||| | || |||||| ||||||| |||||||||||||    
T  31852125 aatatgataaaatttaaatcaccagaatactcatgcttccggatctgcaactttgacgttcaaatcattgatt 31852197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 32191664 - 32191736
Alignment:
Q  57 tatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||||||||||| |||| |||||| ||  | ||||||||| ||| |||||||||||||||||||    
T  32191664 tatgataaaatctaaatcaccagaatgctcatgctttcggatatgcaacgttggcgtccaaatcattgattga 32191736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 202
Target Start/End: Original strand, 528282 - 528441
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattgacta------------aaggtgatct 142  Q
    ||||||||||||||||||||||  ||||||| ||  ||| |||| |||||| |||||| |||||| ||||||| | ||            ||| ||||||    
T  528282 aatatgataaaatctaaatcactagaatacttatacttcagaatctgcaacgttgacgcccaaataattgattaaatatgtaatttactgaagctgatct 528381  T
Q  143 ttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||| ||| |||| |||||||||| |||| || || |||||||||||||||||||||||||    
T  528382 ttcgataagaacgaaacaaacactgcaacaagacacaaaatcaaacaacgccgcacaaga 528441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 546189 - 546115
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||| ||||||||| |||| |||||| |||| ||||| || |||||| |||||| ||||||||||||||||    
T  546189 aatatgatgaaatctaaaccaccagaatacccatgcttctggatctgcaacgttgacgcccaaatcattgattga 546115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 3913506 - 3913580
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||||||| ||||||||||| ||||| |||| ||||| || |||||| |||||||| ||||||||| ||||    
T  3913506 aatatgataaaacctaaatcaccgaaatacccatgcttctggatctgcaacgttgacgtctaaatcattgcttga 3913580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 9380181 - 9380107
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||||||||||||||||||  ||||| |||| |||||||| | ||||||||||   |||||||||||||||    
T  9380181 aatatgataaaatctaaatcaccaaaatacccatgcttctgaatctacaacattgacacacaaatcattgattga 9380107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 29255378 - 29255452
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||||||| |||||| ||||| |||||||| | || || ||| |||||| ||||||||||||||||    
T  29255378 aatatgataaaatctaagtcaccgaaatacccatgtttccggatctgtaacgttgacgcccaaatcattgattga 29255452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 202
Target Start/End: Complemental strand, 31296978 - 31296819
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatca------------ttgattgactaaaggtgatct 142  Q
    ||||||||||||| ||||||||| ||||||||||| ||| | || |||||| |||||||| ||||||            | |||||||| ||  |||| |    
T  31296978 aatatgataaaatataaatcaccagaatactcatgcttccggatctgcaacgttgacgtctaaatcatcaattgaatattggattgactgaaactgattt 31296879  T
Q  143 ttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||||| ||||  ||||| |||| || | ||||||||||||||||||||||||||    
T  31296878 ttcaatatgaatcaaatgaacactgcaacaagatgcaaaatcaaacaacgccgcacaaga 31296819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 57 - 202
Target Start/End: Original strand, 7976121 - 7976268
Alignment:
Q  57 tatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattgactaaagg--tgatctttcaatatgaac 154  Q
    ||||||||||| ||||||||| |||||| |||| ||| | || | |||| ||||||||||||| ||| ||||| |    |  |||||||| |||||||||    
T  7976121 tatgataaaatttaaatcaccagaatacccatgcttccggatctacaacgttgacgtccaaataattaattgaatctgtgattgatcttttaatatgaac 7976220  T
Q  155 caaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
     |||| |||||| ||| || ||||| ||| ||| ||||||||||||||    
T  7976221 taaacgaacaccacaacaagacgcataattaaaaaacgccgcacaaga 7976268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 25064318 - 25064254
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  |||||||||  ||||||  |||||||||||||||||||||||    
T  25064318 gatctttcaatatgaatcaaatgaacaccgcacgaaaacgggaaatcaaacaacgccgcacaaga 25064254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 202
Target Start/End: Complemental strand, 12653062 - 12652962
Alignment:
Q  100 tgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcaca 199  Q
    |||||| |||||| ||||||| |||||||| |||  |  ||||||||||||||| ||||  |||||||||  || | | |||||||||||||||||||||    
T  12653062 tgcaacgttgacggccaaatctttgattgaataatcg--atctttcaatatgaatcaaatgaacaccgcacgaagatggaaaatcaaacaacgccgcaca 12652965  T
Q  200 aga 202  Q
    |||    
T  12652964 aga 12652962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 129
Target Start/End: Complemental strand, 30493687 - 30493616
Alignment:
Q  58 atgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||||| |||||||||  ||||| |||| ||| | || |||||| |||||||||||||||||||||||    
T  30493687 atgataaaatataaatcaccaaaatacccatgcttccggatttgcaacgttgacgtccaaatcattgattga 30493616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 202
Target Start/End: Complemental strand, 35001708 - 35001608
Alignment:
Q  100 tgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcaca 199  Q
    |||||| |||||||||||||| |||||||| |||   ||||||||||||| |||  |||  |||||||||| || |||  ||| ||||||||||||||||    
T  35001708 tgcaacgttgacgtccaaatctttgattgaataat--tgatctttcaataggaataaaatgaacaccgcaagaagacgggaaagcaaacaacgccgcaca 35001611  T
Q  200 aga 202  Q
    |||    
T  35001610 aga 35001608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 14801985 - 14801911
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||| ||||||||||||||  ||||| |||  ||||| || |||||| |||||| ||||||||||||||||    
T  14801985 aatatgatgaaatctaaatcaccaaaatacacattcttctggatctgcaacgttgacgcccaaatcattgattga 14801911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 27097574 - 27097648
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||||||||||||||||||  ||||  |||||||  | || |||||  |||||||||||||||||||||||    
T  27097574 aatatgataaaatctaaatcaccaaaatatccatgttttcggatttgcaatgttgacgtccaaatcattgattga 27097648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 30776821 - 30776751
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattga 125  Q
    ||||||||||||||||||||||| |||||| |||| ||||  || |||||| || ||| ||||||||||||    
T  30776821 aatatgataaaatctaaatcaccagaatacccatgcttctagatttgcaacgttcacgcccaaatcattga 30776751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 8497049 - 8496985
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  |||||||||  || |||  |||||||||||||||||||||||    
T  8497049 gatctttcaatatgaatcaaatgaacaccgcacgaagacgagaaatcaaacaacgccgcacaaga 8496985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 23947313 - 23947377
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  |||||||||| || | |  |||||||||||||||||||||||    
T  23947313 gatctttcaatatgaatcaaatgaacaccgcaaaaagatgggaaatcaaacaacgccgcacaaga 23947377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 25337652 - 25337588
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  |||||||||| || ||| ||||||||||||| |||| |||||    
T  25337652 gatctttcaatatgaatcaaatgaacaccgcaacaagacgaaaaatcaaacaacaccgcgcaaga 25337588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 202
Target Start/End: Complemental strand, 16419276 - 16419176
Alignment:
Q  100 tgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcaca 199  Q
    |||||| |||||||||||||| |||||||| |||  |  || ||||||||||||  |||  |||||||||| || |||  ||| ||||||||||||||||    
T  16419276 tgcaacgttgacgtccaaatctttgattgaataatcg--atttttcaatatgaataaaatgaacaccgcaagaagacgggaaagcaaacaacgccgcaca 16419179  T
Q  200 aga 202  Q
    |||    
T  16419178 aga 16419176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 123 - 202
Target Start/End: Complemental strand, 28981255 - 28981176
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||||||  | |||||| |||||||||||||| |||||| ||| || |  |||||||||||||| ||||| ||||    
T  28981255 tgattgactaaaactaatctttgaatatgaaccaaacgaacaccacaacaagatacaaaatcaaacaacaccgcagaaga 28981176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 606362 - 606288
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||  ||| |||||| ||||| |||||||| | || |||||| |||| ||||||||||||| ||||    
T  606362 aatatgataaaacttaagtcaccgaaatacccatgtttccggatctgcaacgttgatgtccaaatcattggttga 606288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 3355275 - 3355201
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||| |||||||||||| |||| | |||||||||| ||| | || |||||  ||||||||||||||||| |||||    
T  3355275 aataggataaaatctaagtcactgaaatactcatgcttccggatctgcaaagttgacgtccaaatcattcattga 3355201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 12170626 - 12170552
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||| ||| ||||||||||| ||||| |||| ||| | || |||||| ||||| |||||||||||| ||||    
T  12170626 aatatgatcaaacctaaatcaccgaaatacccatgcttccggatctgcaacgttgacatccaaatcattgcttga 12170552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 30493596 - 30493531
Alignment:
Q  137 tgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||||||||||||||||| ||||||  || || |  | |||||||||||||| ||||||||    
T  30493596 tgatctttcaatatgaaccaaacgaacaccagaacaagatacgaaatcaaacaacgctgcacaaga 30493531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 7881097 - 7881161
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| |||   |||||||||  || | | ||||||||||||||||||||||||    
T  7881097 gatctttcaatatgaatcaattgaacaccgcatgaagatggaaaatcaaacaacgccgcacaaga 7881161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 5e-24; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 55 - 200
Target Start/End: Complemental strand, 52944488 - 52944331
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcat------------tgattgactaaaggtgatct 142  Q
    |||||||| |||||||||||||| |||||| |||| ||| | || |||||| ||||||||||||||||            ||||||||| ||| ||||||    
T  52944488 aatatgatgaaatctaaatcaccagaatacccatgcttccggatctgcaacgttgacgtccaaatcatcgattgaatctgtgattgactgaagctgatct 52944389  T
Q  143 ttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaa 200  Q
    ||||||||||| ||||| |||||||||| || ||||||||| ||||||||||||||||    
T  52944388 ttcaatatgaaacaaacgaacaccgcaacaagacgcaaaattaaacaacgccgcacaa 52944331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 202
Target Start/End: Complemental strand, 22300946 - 22300867
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||||||| ||||||||||| |||| | ||||||||||||||| |  |||| |||||||||||||||||||||||    
T  22300946 tgattgactaaagctgatctttcaagatgagctaaacaaacaccgcaacaggacgcgaaatcaaacaacgccgcacaaga 22300867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 47320344 - 47320418
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||| ||||||||||||| |||||||| || ||||| || |||||| |||||||||||||||||||||||    
T  47320344 aatatgatataatctaaatcaccagaatactcttgcttctggatctgcaacgttgacgtccaaatcattgattga 47320418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 123 - 202
Target Start/End: Complemental strand, 18048980 - 18048901
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||| ||| | ||||||||||||||| ||||| |||||||||| ||  ||||||||||||||||||| |||||||    
T  18048980 tgattgactgaagcttatctttcaatatgaatcaaacgaacaccgcaacaaggcgcaaaatcaaacaacgccacacaaga 18048901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 123 - 202
Target Start/End: Complemental strand, 28857499 - 28857420
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||| ||| ||||||||||||||||| ||||| ||||||||||  | ||||  ||||||||||||||||||||||    
T  28857499 tgattgactgaagctgatctttcaatatgaaacaaacgaacaccgcaactagacgcggaatcaaacaacgccgcacaaga 28857420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 4142684 - 4142758
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||  ||| |||||| |||||||||||||||| || |||||| |||||||||||||||||| ||||    
T  4142684 aatatgataaaacttaagtcaccgaaatactcatgtttctggatctgcaacgttgacgtccaaatcattggttga 4142758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 200
Target Start/End: Original strand, 22038736 - 22038891
Alignment:
Q  57 tatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcatt------------gattgactaaaggtgatcttt 144  Q
    ||||||||||| |||||||||| ||||| |||| ||||| || ||||||||||| ||| ||||||||            |||||||| |||  |||||||    
T  22038736 tatgataaaatttaaatcaccgaaatacacatgcttctggatctgcaacattgatgtcaaaatcatttattgaatatgtgattgactgaagtagatcttt 22038835  T
Q  145 caatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaa 200  Q
    ||||||||||||||| | |||| ||| || |||| ||||||||||||||| |||||    
T  22038836 caatatgaaccaaacgagcaccacaacaagacgcgaaatcaaacaacgccacacaa 22038891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 32766691 - 32766617
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||  ||| |||||| ||||| |||||||| | || ||||||||||||||||||||||||||||||    
T  32766691 aatatgataaaacttaagtcaccgaaatacccatgtttccggatctgcaacattgacgtccaaatcattgattga 32766617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 21686112 - 21686248
Alignment:
Q  3 aatatgcaaacaaactcata-cactcatgttaataacatacaacggcaaaatg---------aatatgataaaatctaaatcaccggaatactcatgttt 92  Q
    ||||||| |||||||||| | ||| || |||||||||||||| ||||||||||         |||||||||||| ||||||||||  |||||||||| ||    
T  21686112 aatatgcgaacaaactcacagcacccaagttaataacatacagcggcaaaatgcctacaaataatatgataaaacctaaatcaccaaaatactcatgctt 21686211  T
Q  93 ctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    | | || |||||| |||||||||||||||||| ||||    
T  21686212 ccggatctgcaacgttgacgtccaaatcattgcttga 21686248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 139 - 202
Target Start/End: Complemental strand, 36161792 - 36161729
Alignment:
Q  139 atctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||| |||||||| |||| |||||||||| |||||| |||||||||||||| |||||||||    
T  36161792 atctttcgatatgaacaaaacgaacaccgcaacaaaacgtaaaatcaaacaacgacgcacaaga 36161729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 123 - 202
Target Start/End: Original strand, 51888223 - 51888302
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||| | ||| ||||||||||||||||||||||| |||||||||| || | || ||||||||||||| |||| ||||    
T  51888223 tgattgattgaagttgatctttcaatatgaaccaaacgaacaccgcaacaagatgcgaaatcaaacaacgtcgcataaga 51888302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 202
Target Start/End: Complemental strand, 868279 - 868192
Alignment:
Q  113 tccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||| |||||||| |||   ||||||||||||||||| ||||  |||||||||| || |||  |||||||||||||||||||||||    
T  868279 tccaaatctttgattgaataat--tgatctttcaatatgaatcaaatgaacaccgcaagaagacgggaaatcaaacaacgccgcacaaga 868192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 36194885 - 36194812
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||| |||||||||||||| |||||| |||||||||| || |||||| |||| || |||||||||||||||    
T  36194885 aatatgatgaaatctaaatcaccagaatacccatgtttctggatctgcaactttgatgt-caaatcattgattga 36194812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 2520956 - 2520887
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattg 124  Q
    |||| ||||||||||||||||||| ||||| |||| ||| | || |||||| ||||||||||||||||||    
T  2520956 aatacgataaaatctaaatcaccgaaatacccatgcttccggatctgcaacgttgacgtccaaatcattg 2520887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 43853521 - 43853460
Alignment:
Q  141 ctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||||||||||||  | |||||||| || |||| |||||||||||||||||||||||    
T  43853521 ctttcaatatgaaccaaatgagcaccgcaacaatacgcgaaatcaaacaacgccgcacaaga 43853460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 10389753 - 10389813
Alignment:
Q  142 tttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||| ||||  |||||||||| || ||| ||||||||||||||||||||||||    
T  10389753 tttcaatatgaatcaaatgaacaccgcaagaagacggaaaatcaaacaacgccgcacaaga 10389813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 202
Target Start/End: Complemental strand, 2624589 - 2624526
Alignment:
Q  139 atctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||||||||| |||| ||||||||||| || |||  ||||||||| |||||||||||||    
T  2624589 atctttcaatatgaatcaaataaacaccgcaacaagacgggaaatcaaactacgccgcacaaga 2624526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 202
Target Start/End: Complemental strand, 4643988 - 4643888
Alignment:
Q  100 tgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcaca 199  Q
    |||||| |||||| ||||||| |||||||| |||  |  ||||||||||||||| ||||  |||||||||  || |||  ||||||||||||||||||||    
T  4643988 tgcaactttgacgcccaaatctttgattgaataatcg--atctttcaatatgaatcaaatgaacaccgcacaaagacgggaaatcaaacaacgccgcaca 4643891  T
Q  200 aga 202  Q
    |||    
T  4643890 aga 4643888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 202
Target Start/End: Original strand, 6155238 - 6155317
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||| ||  ||||||||||||||||| ||||| ||||| || | ||||| | ||||||||||||| |||||||||    
T  6155238 tgattgactgaaactgatctttcaatatgaatcaaacgaacactgcgacaaaacacgaaatcaaacaacgacgcacaaga 6155317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 191
Target Start/End: Original strand, 7008977 - 7009053
Alignment:
Q  113 tccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaac 191  Q
    |||||||||||  |||| | ||| |||| |||||||||||| ||||||||||| |||||||  ||||||||||||||||    
T  7008977 tccaaatcatt--ttgattgaagttgatgtttcaatatgaatcaaacaaacactgcaataaggcgcaaaatcaaacaac 7009053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 202
Target Start/End: Original strand, 31359759 - 31359838
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||||||| |||||||| |||| ||||||| ||||||| |||| || |||  |||||| |||||| |||||||||    
T  31359759 tgattgactaaagttgatctttaaataggaaccaagcaaacactgcaacaagacgtgaaatcatacaacgtcgcacaaga 31359838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 122
Target Start/End: Original strand, 31891219 - 31891286
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcat 122  Q
    ||||| || |||||||||||||| ||||||||||| ||||| || |||||| |||||| |||||||||    
T  31891219 aatataatgaaatctaaatcaccagaatactcatgcttctggatttgcaacgttgacgcccaaatcat 31891286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 202
Target Start/End: Original strand, 35395619 - 35395761
Alignment:
Q  62 taaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga--ctaaaggtgatctttcaatatgaaccaaac 159  Q
    ||||||||||| |||| |||||| |||||||||| || |||||| ||||||| ||||| ||| |||||   | ||| ||||||||||||| ||| |||||    
T  35395619 taaaatctaaagcaccagaatacccatgtttctggatttgcaacgttgacgttcaaataatttattgaatttgaagttgatctttcaataagaaacaaac 35395718  T
Q  160 aaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
     ||| |||| | || || | | ||||||||||| || ||||||    
T  35395719 gaacgccgcgacaagacactagatcaaacaacgtcgaacaaga 35395761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 194
Target Start/End: Original strand, 36204396 - 36204467
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgcc 194  Q
    ||||||||| ||| |||| |||||||||||||||||  |||||||||| || | || |||||||||||||||    
T  36204396 tgattgactgaagctgatttttcaatatgaaccaaatgaacaccgcaacaatatgcgaaatcaaacaacgcc 36204467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 43853620 - 43853549
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgat 126  Q
    ||||||||||||||||||||| |  ||||| |||| ||| |||| |||||| ||||||| ||||||||||||    
T  43853620 aatatgataaaatctaaatcatcttaatacgcatgcttccgaatctgcaacgttgacgtacaaatcattgat 43853549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 202
Target Start/End: Original strand, 53616609 - 53616709
Alignment:
Q  100 tgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcaca 199  Q
    |||||| |||||| ||||||| ||||||||  ||   ||||||||||||||||| ||||  |||||||||  || |||  ||||||||||||||||||||    
T  53616609 tgcaacgttgacgcccaaatctttgattgaacaat--tgatctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccgcaca 53616706  T
Q  200 aga 202  Q
    |||    
T  53616707 aga 53616709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 9145823 - 9145897
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||| ||||||||||||| ||||||||||| ||| | ||||  ||| |||| ||| ||||||||||||||    
T  9145823 aatatgatacaatctaaatcaccagaatactcatgcttccggatatataacgttgatgtctaaatcattgattga 9145897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 22611360 - 22611286
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||  ||| |||||| |||||||||| ||| | || |||||| |||||||||||||||||| ||||    
T  22611360 aatatgataaaacttaagtcaccgaaatactcatgcttccggatctgcaacgttgacgtccaaatcattggttga 22611286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 24098999 - 24099073
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||||||| |||| |||| | ||||| |||||||| | || |||||| |||||||||||||||||| ||||    
T  24098999 aatatgataaaacctaagtcactgaaatacccatgtttccggatctgcaacgttgacgtccaaatcattgcttga 24099073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 26633603 - 26633677
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||||||| |||| |||| | |||| ||||| ||| | || ||||||||||||||||||||||||| ||||    
T  26633603 aatatgataaaacctaagtcacagaaatattcatgcttccggatctgcaacattgacgtccaaatcattggttga 26633677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 36161888 - 36161814
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||||||||||||   |||||||||||||  | || || ||| ||| |||||||||||||||||||    
T  36161888 aatatgataaaatctaaatcacgaaaatactcatgttttcggatctgtaacgttggcgtccaaatcattgattga 36161814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 53811205 - 53811131
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||  ||| |||||| |||||||||| ||| | || |||||| |||||||||||||||||| ||||    
T  53811205 aatatgataaaacttaagtcaccgaaatactcatgcttccggatctgcaacgttgacgtccaaatcattggttga 53811131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 35261286 - 35261221
Alignment:
Q  137 tgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||| |||||||| ||||  |||||||||| || ||| ||||||||||||||||||| ||||    
T  35261286 tgatcttttaatatgaatcaaatgaacaccgcaagaagacggaaaatcaaacaacgccgcagaaga 35261221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 199
Target Start/End: Original strand, 2069592 - 2069668
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcaca 199  Q
    ||||||||||||  |||| |||||||||||||||||  || ||||||| || | || ||||||||||||| ||||||    
T  2069592 tgattgactaaaactgatatttcaatatgaaccaaatgaataccgcaacaagatgcgaaatcaaacaacgtcgcaca 2069668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 12199709 - 12199769
Alignment:
Q  127 tgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaa 187  Q
    ||||| ||| |||| ||||||||||||| |||| |||||||||| || |||||||||||||    
T  12199709 tgactgaagttgatatttcaatatgaactaaacgaacaccgcaacaagacgcaaaatcaaa 12199769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 21090270 - 21090182
Alignment:
Q  114 ccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||| |||||||| || |  | ||| ||||||||||| ||||  |||||||||| |||||| |||||||||||||| || ||||||    
T  21090270 ccaaatctttgattgaatataatttatccttcaatatgaatcaaatgaacaccgcaaaaaaacgaaaaatcaaacaacgtcgtacaaga 21090182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 25273977 - 25273913
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  |||||||||  || |||  |||||||||||||||||||||||    
T  25273977 gatctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccgcacaaga 25273913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 199
Target Start/End: Original strand, 35964934 - 35965031
Alignment:
Q  100 tgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcaca 199  Q
    |||||| |||||||||||||| |||||||| |||  |  |||||| |||||||| ||||  |||||| |||||| |||  ||||||||||||||| ||||    
T  35964934 tgcaacgttgacgtccaaatctttgattgaataatcg--atcttttaatatgaatcaaatgaacaccacaataagacgggaaatcaaacaacgccacaca 35965031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 43444487 - 43444423
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  |||||||||   | ||| ||||||||||||||||||||||||    
T  43444487 gatctttcaatatgaatcaaatgaacaccgcacgtagacggaaaatcaaacaacgccgcacaaga 43444423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 43510373 - 43510305
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcatt 123  Q
    ||||||||||||  ||| |||||| ||||| |||| ||| | || ||||||||||||||||||||||||    
T  43510373 aatatgataaaacttaagtcaccgaaatacccatgcttcaggatctgcaacattgacgtccaaatcatt 43510305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 47417756 - 47417692
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  |||||||||  || |||  |||||||||||||||||||||||    
T  47417756 gatctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccgcacaaga 47417692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 50766507 - 50766571
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  |||||||||  || |||  |||||||||||||||||||||||    
T  50766507 gatctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccgcacaaga 50766571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 54022037 - 54021965
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgatt 127  Q
    ||||||||||||||||| |||||| ||||  |||||||  | || |||||| ||||| |||||||||||||||    
T  54022037 aatatgataaaatctaagtcaccgaaatatccatgttttcggatctgcaacgttgacatccaaatcattgatt 54021965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 55228052 - 55227996
Alignment:
Q  146 aatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||| ||| ||||| |||||||||||||||||||||||| |||||||  ||||||||    
T  55228052 aataggaatcaaacgaacaccgcaataaaacgcaaaatctaacaacgttgcacaaga 55227996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 202
Target Start/End: Original strand, 9528836 - 9528936
Alignment:
Q  100 tgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcaca 199  Q
    |||||| |||||| ||||||| |||||||| |||  |  ||||||||||||||| ||||  |||| ||||  || |||  ||||||||||||||||||||    
T  9528836 tgcaacgttgacggccaaatctttgattgaataatcg--atctttcaatatgaatcaaatgaacatcgcacgaagacgggaaatcaaacaacgccgcaca 9528933  T
Q  200 aga 202  Q
    |||    
T  9528934 aga 9528936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 123 - 202
Target Start/End: Complemental strand, 9643485 - 9643406
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||| ||| |||||||| |||||||||||||| ||||| |||| || | |  ||||||||||||| ||| |||||    
T  9643485 tgattgactgaagttgatcttttaatatgaaccaaacgaacactgcaacaagatgagaaatcaaacaacgtcgctcaaga 9643406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 9643617 - 9643491
Alignment:
Q  1 taaatatgcaaacaaactcata-cactcatgttaataacatacaacggcaaaatgaatatgataaaatctaaatcaccggaatactcatgtttctgaata 99  Q
    ||||| |||||||||||||| | ||| || ||||||| |||| |||||||||||    |||||||||| ||||||||| ||||||||||  ||| | ||     
T  9643617 taaatttgcaaacaaactcacaacacccaagttaatagcatataacggcaaaat---aatgataaaatttaaatcaccagaatactcatacttccggatc 9643521  T
Q  100 tgcaacattgacgtccaaatcattgattga 129  Q
    |  |||||||| || ||||||||| |||||    
T  9643520 tataacattgatgttcaaatcattaattga 9643491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 139 - 202
Target Start/End: Complemental strand, 29965728 - 29965665
Alignment:
Q  139 atctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||||||||| ||||  |||||||||  || |||  |||||||||||||||||||||||    
T  29965728 atctttcaatatgaatcaaatgaacaccgcacaaagacgggaaatcaaacaacgccgcacaaga 29965665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 123 - 190
Target Start/End: Original strand, 48351198 - 48351265
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaa 190  Q
    ||||||||| ||| |||||||||||||| |||||||| |||||||  | || |||| |||||||||||    
T  48351198 tgattgactgaagctgatctttcaatataaaccaaacgaacaccgtgacaagacgcgaaatcaaacaa 48351265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 202
Target Start/End: Complemental strand, 49410353 - 49410253
Alignment:
Q  100 tgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcaca 199  Q
    |||||| |||||| ||||||| |||||||| |||  |  ||||||||||||||| ||||  |||||||||  || |||  |||||||||||||| |||||    
T  49410353 tgcaacgttgacgcccaaatctttgattgaataatcg--atctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgctgcaca 49410256  T
Q  200 aga 202  Q
    |||    
T  49410255 aga 49410253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 139 - 202
Target Start/End: Complemental strand, 51318078 - 51318015
Alignment:
Q  139 atctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||||||||| ||||  |||||||||| || |||  ||||||||||| |||||||||||    
T  51318078 atctttcaatatgaatcaaattaacaccgcaagaagacgggaaatcaaacaatgccgcacaaga 51318015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 2069512 - 2069586
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||| |||||||||  ||||| |||| |||| ||| |||||| |||||  |||||| |||||||||    
T  2069512 aatatgataaaatataaatcaccataatacccatgcttctaaatttgcaacgttgacacccaaataattgattga 2069586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 190
Target Start/End: Complemental strand, 7393390 - 7393301
Alignment:
Q  100 tgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaa 190  Q
    |||||| |||||| ||||||||||| |||||| ||| ||||||||||||| ||| ||||| |||||| ||| || | |  |||||||||||    
T  7393390 tgcaacgttgacg-ccaaatcattgcttgacttaagttgatctttcaataggaatcaaacgaacaccacaacaagatgtgaaatcaaacaa 7393301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 10258828 - 10258902
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||||||| |||||  |||| ||||| ||| |  |||||||| ||| || ||||||||||||||||    
T  10258828 aatatgataaaatctaagtcaccaaaatattcatgcttccgggtatgcaacgttggcgcccaaatcattgattga 10258902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 13634292 - 13634218
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||| ||||||| ||||||||| | ||||| |||||||| | || |||||| |||||||||||||| ||| ||||    
T  13634292 aataagataaaacctaaatcactgaaatacccatgtttccggatctgcaacgttgacgtccaaatcgttgcttga 13634218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 22611265 - 22611215
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaac 188  Q
    |||||||||||| ||||  |||||||||||| | |||||||||||||||||    
T  22611265 gatctttcaataggaactgaacaaacaccgcgacaaaacgcaaaatcaaac 22611215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 169
Target Start/End: Complemental strand, 27652041 - 27651995
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgca 169  Q
    |||||| |||||| ||||||||||||| ||||||||| |||||||||    
T  27652041 tgattgtctaaagctgatctttcaatacgaaccaaacgaacaccgca 27651995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 89
Target Start/End: Original strand, 51888143 - 51888177
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatg 89  Q
    ||||||||||||||||||||||| |||||||||||    
T  51888143 aatatgataaaatctaaatcaccagaatactcatg 51888177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 56040578 - 56040652
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||||||| |||| |||||| ||||| |||| ||||| || |||||| ||| || ||||||||||| ||||    
T  56040578 aatatgataaaacctaagtcaccgaaatacccatgcttctggatctgcaacgttgccgcccaaatcattggttga 56040652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 138 - 187
Target Start/End: Original strand, 19853539 - 19853588
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaa 187  Q
    |||||||||||| ||||  |||||||||||  ||||||||||||||||||    
T  19853539 gatctttcaataggaactgaacaaacaccgtgataaaacgcaaaatcaaa 19853588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 21662614 - 21662541
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattg 128  Q
    |||||||||||| |||| |||||| ||||| |||| ||| | || |||||| ||||||  ||||||||||||||    
T  21662614 aatatgataaaacctaagtcaccgaaatacccatgcttccggatctgcaacgttgacgctcaaatcattgattg 21662541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 21671378 - 21671305
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattg 128  Q
    |||||||||||| |||| |||||| ||||| |||| ||| | || |||||| ||||||  ||||||||||||||    
T  21671378 aatatgataaaacctaagtcaccgaaatacccatgcttccggatctgcaacgttgacgctcaaatcattgattg 21671305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 9284005 - 9283941
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  |||||||||  || |||  ||||||||||||||| |||||||    
T  9284005 gatctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccacacaaga 9283941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 20569349 - 20569285
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  |||||||||  || ||| ||||||||||||| ||||| ||||    
T  20569349 gatctttcaatatgaatcaaatgaacaccgcacgaagacggaaaatcaaacaaccccgcagaaga 20569285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 119
Target Start/End: Original strand, 31359678 - 31359742
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaat 119  Q
    ||||||| ||||||||||||||| || ||| |||| ||| |||| |||||| ||||| |||||||    
T  31359678 aatatgagaaaatctaaatcaccagattacacatgcttcggaatctgcaacgttgacttccaaat 31359742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 31381667 - 31381731
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||| |||||||| ||||  |||||||||  || ||| ||||||||||||||| ||||||||    
T  31381667 gatcttttaatatgaatcaaattaacaccgcacgaagacggaaaatcaaacaacgctgcacaaga 31381731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 43154009 - 43154073
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  |||||||||  || |||  ||||||||||||||| |||||||    
T  43154009 gatctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccacacaaga 43154073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 3e-22; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 55 - 197
Target Start/End: Complemental strand, 44543432 - 44543279
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga------------ctaaaggtgatct 142  Q
    ||||||||| ||||||||||||  |||||||| || ||||| || |||||| |||||||||||||||||||||||            |||||| ||||||    
T  44543432 aatatgatataatctaaatcactagaatactcttgcttctggatctgcaacgttgacgtccaaatcattgattgaatctgtgattgactaaagctgatct 44543333  T
Q  143 ttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgca 197  Q
    ||||||||||||| ||| ||||||||||||| | || ||||||||||||||||||    
T  44543332 ttcaatatgaacc-aacgaacaccgcaataagatgccaaatcaaacaacgccgca 44543279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 55 - 200
Target Start/End: Complemental strand, 47133063 - 47132906
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcat------------tgattgactaaaggtgatct 142  Q
    |||||||| |||||||||||||| ||||||||||| ||| | || |||||  ||||||||||||||||            ||||||||| ||| ||||||    
T  47133063 aatatgatgaaatctaaatcaccagaatactcatgcttccggatctgcaatgttgacgtccaaatcatcgattgaatctgtgattgactgaagctgatct 47132964  T
Q  143 ttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaa 200  Q
    ||||||||||| ||||| |||||||||| || |||| |||| ||||||||||||||||    
T  47132963 ttcaatatgaagcaaacgaacaccgcaacaagacgcgaaattaaacaacgccgcacaa 47132906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 55 - 190
Target Start/End: Complemental strand, 15492447 - 15492313
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaac 154  Q
    |||||||||||||||||||||||  ||||  |||| | | | || ||||||| ||||| |||||||||||||||| | ||| |||| |||||||||||||    
T  15492447 aatatgataaaatctaaatcaccataatatccatgctccaggatctgcaacactgacgcccaaatcattgattgattgaagttgat-tttcaatatgaac 15492349  T
Q  155 caaacaaacaccgcaataaaacgcaaaatcaaacaa 190  Q
    ||||||||| || ||| || |||| |||||||||||    
T  15492348 caaacaaactccccaacaagacgcgaaatcaaacaa 15492313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 55 - 201
Target Start/End: Complemental strand, 24583110 - 24582953
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga------------ctaaaggtgatct 142  Q
    ||||||||| ||||||||||||| ||||| || || ||||| || |||||| |||||||||||||||||||||||            || ||| ||||||    
T  24583110 aatatgatataatctaaatcaccagaatattcttgcttctggatctgcaacgttgacgtccaaatcattgattgaatctgtgattgactgaagctgatct 24583011  T
Q  143 ttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaag 201  Q
    ||||||||||||| ||| |||||||||| || | || ||||||||||||||||||||||    
T  24583010 ttcaatatgaacc-aacgaacaccgcaacaagatgccaaatcaaacaacgccgcacaag 24582953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 202
Target Start/End: Complemental strand, 12635250 - 12635171
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||| ||||||| ||||||||||||||||||||||  |||||| | | |||||| ||||||||||||||||||||||||    
T  12635250 tgatttactaaagttgatctttcaatatgaaccaaatgaacaccactacaaaacgtaaaatcaaacaacgccgcacaaga 12635171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 36775642 - 36775716
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||| |||||||||||||||| |||| |||||||||| || |||||| |||||| ||||||||||||||||    
T  36775642 aatatgatgaaatctaaatcaccgggatacccatgtttctggatctgcaacgttgacgcccaaatcattgattga 36775716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 58 - 202
Target Start/End: Complemental strand, 49627070 - 49626915
Alignment:
Q  58 atgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga------------ctaaaggtgatctttc 145  Q
    |||||| ||||||||||| | |||||||| || ||||| || |||||| |||||||||||||||||||||||            || ||| |||||||||    
T  49627070 atgatataatctaaatcatcagaatactcttgcttctgcatctgcaacgttgacgtccaaatcattgattgaatttgtgattgactgaagctgatctttc 49626971  T
Q  146 aatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||| ||| |||||||||| || | |  |||||||||||||||||||||||    
T  49626970 aatatgaacc-aacgaacaccgcaacaagatgtcaaatcaaacaacgccgcacaaga 49626915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 125 - 202
Target Start/End: Original strand, 31692481 - 31692557
Alignment:
Q  125 attgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||||| | ||||||||||||||||||| | |||||||||| || | ||||||||||||||| ||||||||||    
T  31692481 attgactaaagctaatctttcaatatgaaccaa-cgaacaccgcaacaagaagcaaaatcaaacaacaccgcacaaga 31692557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 56 - 202
Target Start/End: Complemental strand, 39987555 - 39987411
Alignment:
Q  56 atatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaacc 155  Q
    ||||||||||||  || | |||||||||| ||||  || | || |||||| |||||| |||| || |||||||| |||  |  ||||||||||||||| |    
T  39987555 atatgataaaattaaagtgaccggaatacccatgcctccggatctgcaacgttgacgcccaattctttgattgaataatcg--atctttcaatatgaatc 39987458  T
Q  156 aaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||  |||||||||  || ||| ||||||||||||||||||||||||    
T  39987457 aaatgaacaccgcagcaatacggaaaatcaaacaacgccgcacaaga 39987411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 55 - 187
Target Start/End: Complemental strand, 44915799 - 44915655
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattga------------ttgactaaaggtgatct 142  Q
    |||||||||||||||||   |||| |||||||||| ||| | || ||||||||||||| ||||||||||||            |||||| | | ||||||    
T  44915799 aatatgataaaatctaagaaaccgaaatactcatgcttccggatctgcaacattgacgcccaaatcattgattgaatttgtaattgactgatgttgatct 44915700  T
Q  143 ttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaa 187  Q
    |||||||||||| |||| |||||||| | ||||||||||||||||    
T  44915699 ttcaatatgaactaaacgaacaccgcgacaaaacgcaaaatcaaa 44915655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 128
Target Start/End: Original strand, 10776396 - 10776466
Alignment:
Q  58 atgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattg 128  Q
    ||||||||| |||| |||||| |||||||||| ||||| || |||||  ||||||||||||||||||||||    
T  10776396 atgataaaacctaagtcaccgaaatactcatgcttctggatctgcaatgttgacgtccaaatcattgattg 10776466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 48750407 - 48750273
Alignment:
Q  3 aatatgcaaacaaactcata-cactcatgttaataacatacaacggcaaaatg---------aatatgataaaatctaaatcaccggaatactcatgttt 92  Q
    ||||||| |||||||||| | ||| || ||||||| |||||||||||||||||         |||||||| |||||||||||||| |||||| |||| ||    
T  48750407 aatatgcgaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcctacaaataatatgatgaaatctaaatcaccagaatacccatgctt 48750308  T
Q  93 ctgaatatgcaacattgacgtccaaatcattgatt 127  Q
     || || |||||| |||||| ||||||||||||||    
T  48750307 atggatctgcaacgttgacgcccaaatcattgatt 48750273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 200
Target Start/End: Complemental strand, 16262941 - 16262864
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaa 200  Q
    |||||||||  || |||| |||||||||||| ||||| |||||| ||| || |||| |||||||||||||||||||||    
T  16262941 tgattgactgcagttgatttttcaatatgaatcaaacgaacaccacaacaagacgcgaaatcaaacaacgccgcacaa 16262864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 31984321 - 31984208
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaac 154  Q
    |||||||||||| |||| |||||| ||||| |||| ||| | || |||||| |||||| |||||||||||||||||| | |  ||| |||||||| ||||    
T  31984321 aatatgataaaacctaagtcaccgaaatacccatgcttccggatttgcaacgttgacgcccaaatcattgattgactgatgtcgatatttcaataggaac 31984222  T
Q  155 caaacaaacaccgc 168  Q
     |||  ||||||||    
T  31984221 taaatgaacaccgc 31984208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 35584613 - 35584677
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  |||||||||  || ||| ||||||||||||||||||||||||    
T  35584613 gatctttcaatatgaatcaaatgaacaccgcacgaagacggaaaatcaaacaacgccgcacaaga 35584677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 40163509 - 40163573
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaa 187  Q
    ||||||||| ||| ||||||| |||||  ||||||||||||||||||| |||||||| |||||||    
T  40163509 tgattgactgaagctgatcttccaatagaaaccaaacaaacaccgcaacaaaacgcataatcaaa 40163573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 202
Target Start/End: Original strand, 6217839 - 6217918
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||| ||| ||||||||||||||  ||||||| |||| |  || || |||||||||||||||||| |||||||||    
T  6217839 tgattgactgaagttgatctttcaatatataccaaacgaacaacataacaagacgcaaaatcaaacaacgtcgcacaaga 6217918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 202
Target Start/End: Complemental strand, 34528810 - 34528731
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||| ||| |||||||||||||| ||||||| |||||||| || || | || |||||||||||| |||| |||||    
T  34528810 tgattgactgaagttgatctttcaatataaaccaaagaaacaccgaaacaagatgcgaaatcaaacaacaccgcgcaaga 34528731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 19061069 - 19060995
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||| ||||||||||||| |||||||| |  ||||| || | ||||||||| |||||||| |||||||||    
T  19061069 aatatgatataatctaaatcaccagaatactcttccttctggatctacaacattgatgtccaaattattgattga 19060995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 61 - 127
Target Start/End: Complemental strand, 26535503 - 26535437
Alignment:
Q  61 ataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgatt 127  Q
    ||||||||||| ||||||||||||||||| ||| | || |||||| |||| | ||||||||||||||    
T  26535503 ataaaatctaagtcaccggaatactcatgcttccggatctgcaacgttgaagcccaaatcattgatt 26535437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 27580060 - 27580134
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||||||| |||||| |||||||||| ||  |||| |||||  |||||| |||||||||| |||||    
T  27580060 aatatgataaaatctaagtcaccgaaatactcatgctttcgaatctgcaatgttgacgcccaaatcatttattga 27580134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 43412534 - 43412460
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||||||||||| ||||||  ||||| |||| ||||| || |||||| ||||| | |||||||||||||||    
T  43412534 aatatgataaaatctagatcaccaaaatacgcatgcttctggatctgcaacgttgactttcaaatcattgattga 43412460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 13144746 - 13144818
Alignment:
Q  57 tatgataaaatctaaatcaccggaatactcatg-tttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||||| |||| | |||||||||| |||| || | ||||| ||||||||||||||||||||||||    
T  13144746 tatgataaaatctaagtcactgaaatactcatgctttcaga-tctgcaaaattgacgtccaaatcattgattga 13144818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 159
Target Start/End: Complemental strand, 31317896 - 31317794
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaac 154  Q
    ||||||||||| |||||||||||| ||||  |||| ||| |  | || ||| |||||| ||||||||||||||||  |||| ||||||||||||| |||     
T  31317896 aatatgataaattctaaatcaccgaaatatccatgcttccgggtctgtaacgttgacgcccaaatcattgattga--aaagttgatctttcaataggaat 31317799  T
Q  155 caaac 159  Q
    |||||    
T  31317798 caaac 31317794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 127
Target Start/End: Complemental strand, 41994584 - 41994515
Alignment:
Q  58 atgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgatt 127  Q
    |||||||||||||||||||| |||||||| |  ||| | ||  ||||| |||||||||||||||||||||    
T  41994584 atgataaaatctaaatcaccagaatactcgttcttccggattagcaacgttgacgtccaaatcattgatt 41994515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 799813 - 799877
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||||||||  ||||||||||||| ||  ||| ||||||||| | ||||||||    
T  799813 gatctttcaatatgaaccaaatgaacaccgcaataagacaaaaattcaaacaacactgcacaaga 799877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 9341784 - 9341728
Alignment:
Q  146 aatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||| |||||||||||||||| || || || ||||||||||||| ||||||||    
T  9341784 aatatgaatcaaacaaacaccgcaacaagacacagaatcaaacaacgctgcacaaga 9341728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 9687199 - 9687263
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  |||||||||| || | |  |||||||||||||||||||||||    
T  9687199 gatctttcaatatgaatcaaatgaacaccgcaagaagatgggaaatcaaacaacgccgcacaaga 9687263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 16263063 - 16262947
Alignment:
Q  22 acactcatgttaataacatacaacggcaaaatgaata---------tgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacg 112  Q
    ||||||||||||||| |||| |||||||||||| |||         ||||||||||||||||| | ||||||||||| ||| | || |||||| |||| |    
T  16263063 acactcatgttaatagcataaaacggcaaaatgcatacgaataacatgataaaatctaaatcatcagaatactcatgcttccggatctgcaacgttgatg 16262964  T
Q  113 tccaaatcattgattga 129  Q
      |||||||||||||||    
T  16262963 cacaaatcattgattga 16262947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 123
Target Start/End: Original strand, 37720081 - 37720149
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcatt 123  Q
    ||||||||||||||||||| ||| |||||| |||| || || || |||||| |||||| ||||||||||    
T  37720081 aatatgataaaatctaaataaccagaatacccatgcttttggatctgcaacgttgacgcccaaatcatt 37720149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 39927549 - 39927613
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  |||||||||| || |||  ||||||||||||||| |||||||    
T  39927549 gatctttcaatatgaaacaaatgaacaccgcaacaagacgggaaatcaaacaacgccacacaaga 39927613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 41994508 - 41994428
Alignment:
Q  122 ttgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||| ||  |||||||||||||||||| |||| |||||| ||| || |  | |||||||||||||| ||||||||    
T  41994508 ttgattgactgaaactgatctttcaatatgaacgaaacgaacaccacaacaagatccgaaatcaaacaacgctgcacaaga 41994428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 202
Target Start/End: Complemental strand, 9172612 - 9172512
Alignment:
Q  100 tgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcaca 199  Q
    |||||| |||||||||||||| |||||||| |||  |  ||||||||||| |||  |||  |||||||||| || |||  ||| ||||||||||||||||    
T  9172612 tgcaacgttgacgtccaaatctttgattgaataatcg--atctttcaataggaataaaatgaacaccgcaagaagacgggaaagcaaacaacgccgcaca 9172515  T
Q  200 aga 202  Q
    |||    
T  9172514 aga 9172512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 202
Target Start/End: Complemental strand, 9180594 - 9180494
Alignment:
Q  100 tgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcaca 199  Q
    |||||| |||||||||||||| |||||||| |||  |  ||||||||||| |||  |||  |||||||||| || |||  ||| ||||||||||||||||    
T  9180594 tgcaacgttgacgtccaaatctttgattgaataatcg--atctttcaataggaataaaatgaacaccgcaagaagacgggaaagcaaacaacgccgcaca 9180497  T
Q  200 aga 202  Q
    |||    
T  9180496 aga 9180494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 9341886 - 9341815
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgat 126  Q
    ||||||||||||||||| ||||| |||||  |||| | |||||| |||| | |||||||||||| |||||||    
T  9341886 aatatgataaaatctaagtcaccagaatatacatgctcctgaatctgcatcgttgacgtccaaaacattgat 9341815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 202
Target Start/End: Original strand, 51868604 - 51868704
Alignment:
Q  100 tgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcaca 199  Q
    |||||| |||||||||||||| |||||||| |||  |  ||||||||||| |||  |||  |||||||||| || |||  ||| ||||||||||||||||    
T  51868604 tgcaacgttgacgtccaaatctttgattgaataatcg--atctttcaataagaataaaatgaacaccgcaagaagacgagaaagcaaacaacgccgcaca 51868701  T
Q  200 aga 202  Q
    |||    
T  51868702 aga 51868704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 7337595 - 7337669
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||||||| | ||||||||| ||||| |||| ||| | || |||||| ||||||| |||||||||| ||||    
T  7337595 aatatgataaaaccaaaatcaccgaaatacccatgcttccggatctgcaacgttgacgtgcaaatcattgcttga 7337669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 21947550 - 21947624
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||  ||| |||||| |||| ||||| ||| | || |||||| |||||||||||||||||| ||||    
T  21947550 aatatgataaaacttaagtcaccgaaatattcatgcttccggatctgcaacgttgacgtccaaatcattggttga 21947624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 32395158 - 32395084
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||  ||| |||||| ||||| |||| ||  |||| |||||| |||||||||||||||||| ||||    
T  32395158 aatatgataaaacttaagtcaccgaaatacccatgctttcgaatctgcaacgttgacgtccaaatcattggttga 32395084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 32679073 - 32679147
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||| ||||||||||||||  |||||||||| ||| | || |||||  ||| |||||||||||| ||||||    
T  32679073 aatatgatgaaatctaaatcaccataatactcatgcttccggatttgcaatgttggcgtccaaatcatcgattga 32679147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 200
Target Start/End: Complemental strand, 34519218 - 34519156
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaa 200  Q
    |||||||||||||||| ||||  |||||| ||| || |||  |||||||||||||||||||||    
T  34519218 gatctttcaatatgaatcaaatgaacaccacaagaagacgagaaatcaaacaacgccgcacaa 34519156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 35484323 - 35484397
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||||||| | ||||||||| ||||| |||| ||  | || |||||| |||||||||||||||||| ||||    
T  35484323 aatatgataaaaccgaaatcaccgaaatacccatgctttcggatctgcaacgttgacgtccaaatcattgcttga 35484397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 45415718 - 45415644
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||||||| |||| |||||| |||||  ||| ||| | || |||||| |||||||||||||||||| ||||    
T  45415718 aatatgataaaacctaagtcaccgaaatacctatgcttccggatctgcaacgttgacgtccaaatcattgcttga 45415644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 138 - 191
Target Start/End: Original strand, 7312100 - 7312153
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaac 191  Q
    |||||||||||||||| ||||  |||||||||| || ||| |||||||||||||    
T  7312100 gatctttcaatatgaatcaaatgaacaccgcaacaagacggaaaatcaaacaac 7312153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 34413024 - 34413085
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtcca 116  Q
    |||||||| |||||||||||||| |||||| |||| ||||| || | |||| ||||||||||    
T  34413024 aatatgatgaaatctaaatcaccagaatacccatgcttctggatctacaacgttgacgtcca 34413085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 186
Target Start/End: Complemental strand, 45789619 - 45789558
Alignment:
Q  125 attgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaa 186  Q
    ||||| ||||| |||| |||||||| |||||||||||||| ||||| || ||| ||||||||    
T  45789619 attgattaaagttgatatttcaataggaaccaaacaaacatcgcaacaacacgtaaaatcaa 45789558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 100 - 200
Target Start/End: Original strand, 50272099 - 50272197
Alignment:
Q  100 tgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcaca 199  Q
    |||||| |||||| ||||||| |||||||| |||  |  || |||||||||||| ||||  |||||||||  || |||  ||||||||||||||||||||    
T  50272099 tgcaacgttgacgcccaaatctttgattgaataatcg--atttttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccgcaca 50272196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 51916599 - 51916671
Alignment:
Q  56 atatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||||||||||| |||| | |||||||||| ||| | || |||||| ||||||  |||||||||||||||    
T  51916599 atatgataaaatctaagtcac-gaaatactcatgcttccgtatctgcaacgttgacgctcaaatcattgattga 51916671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 5701341 - 5701281
Alignment:
Q  142 tttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||| ||||  |||||||||  || |||  |||||||||||||||||||||||    
T  5701341 tttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccgcacaaga 5701281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 202
Target Start/End: Complemental strand, 7342889 - 7342744
Alignment:
Q  56 atatgataaaatctaaatcaccggaatactcatgtt-tctgaatatgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaac 154  Q
    ||||||||||||  || |||||||||||  |||| | || | || |||||| |||||||||||||| |||||||| |||    |||||||||||| |||     
T  7342889 atatgataaaattaaagtcaccggaatatccatggtctccggatctgcaacgttgacgtccaaatctttgattgaataa--tcgatctttcaataggaat 7342792  T
Q  155 caaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
     |||  |||| ||||| || |||  ||| |||||||||||||||||||    
T  7342791 aaaatgaacaacgcaagaagacgggaaaacaaacaacgccgcacaaga 7342744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 19715890 - 19715954
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  |||||||||  || |||  |||||||||||||| ||||||||    
T  19715890 gatctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgctgcacaaga 19715954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 28035225 - 28035161
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  ||||||| |  || |||  |||||||||||||||||||||||    
T  28035225 gatctttcaatatgaatcaaatgaacaccgtacgaagacgggaaatcaaacaacgccgcacaaga 28035161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 30879161 - 30879098
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  |||||||||  || ||| |||||||||||||| |||||||||    
T  30879161 gatctttcaatatgaatcaaatgaacaccgcacgaagacggaaaatcaaacaacg-cgcacaaga 30879098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 32873796 - 32873868
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgatt 127  Q
    |||||||||||||| || | | || ||||| |||||||||| || |||||||||||||   ||||||||||||    
T  32873796 aatatgataaaatcaaagtgatcgaaatacccatgtttctggatctgcaacattgacgcttaaatcattgatt 32873868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 40646756 - 40646700
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgcc 194  Q
    |||||||||||||||| |||| ||||||||||  || |||  |||||||||||||||    
T  40646756 gatctttcaatatgaatcaaataaacaccgcacgaagacgggaaatcaaacaacgcc 40646700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 55 - 202
Target Start/End: Complemental strand, 6187 - 6028
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattga------------ttgactaaaggtgatct 142  Q
    ||||||||||||||||||||||| |||||| |||| ||| | || |||||||||||| |||||||||||||            |||||| ||| | |  |    
T  6187 aatatgataaaatctaaatcaccagaatacacatgcttccggatctgcaacattgacatccaaatcattgattgaatatgtgattgactgaagttaacat 6088  T
Q  143 ttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||||||||||  |||||||||| || |||| |||||||||||||||||||||||    
T  6087 ttcaatatgaaccaaatgaacaccgcaacaatacgcgaaatcaaacaacgccgcacaaga 6028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 2e-20; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 55 - 202
Target Start/End: Original strand, 29617204 - 29617363
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga------------ctaaaggtgatct 142  Q
    ||||||||||||||||||||||| |||||   |||||| || || |||||| |||||||||||||||||||||||            || ||| || |||    
T  29617204 aatatgataaaatctaaatcaccagaataacaatgtttatggatctgcaacgttgacgtccaaatcattgattgaatctgtgattgactgaagttggtct 29617303  T
Q  143 ttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||| ||||||||| |||||||||| || |||| |||||||||| ||||||||||||    
T  29617304 ttcaataagaaccaaacgaacaccgcaacaagacgcgaaatcaaacagcgccgcacaaga 29617363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 57 - 202
Target Start/End: Original strand, 1236629 - 1236785
Alignment:
Q  57 tatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattgacta------------aaggtgatcttt 144  Q
    ||||||| ||||||||||||| |||||||| || ||||| || |||||| |||||||||| |||||||||||| ||            ||| ||||||||    
T  1236629 tatgatataatctaaatcaccagaatactcttgcttctggatctgcaacgttgacgtccagatcattgattgaatatgtgattgactgaagttgatcttt 1236728  T
Q  145 caatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||||| ||| |||||||||| || | || |||||||||||||||||||||||    
T  1236729 caatatgaacc-aacgaacaccgcaacaagatgccaaatcaaacaacgccgcacaaga 1236785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 57 - 202
Target Start/End: Original strand, 1239329 - 1239485
Alignment:
Q  57 tatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattgacta------------aaggtgatcttt 144  Q
    ||||||| ||||||||||||| |||||||| || ||||| || |||||| |||||||||| |||||||||||| ||            ||| ||||||||    
T  1239329 tatgatataatctaaatcaccagaatactcttgcttctggatctgcaacgttgacgtccagatcattgattgaatatgtgattgactgaagttgatcttt 1239428  T
Q  145 caatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||||| ||| |||||||||| || | || |||||||||||||||||||||||    
T  1239429 caatatgaacc-aacgaacaccgcaacaagatgccaaatcaaacaacgccgcacaaga 1239485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 202
Target Start/End: Complemental strand, 5333508 - 5333429
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||| ||| ||||||||||||| ||||||||| ||||||| || || ||||||||||||||||| ||||||||||    
T  5333508 tgattgactgaagttgatctttcaataggaaccaaacgaacaccggaacaagacgcaaaatcaaacaacaccgcacaaga 5333429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 15344467 - 15344393
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||| ||||||||||||| |||||||| || ||||| || |||||| |||||||||||||||||||||||    
T  15344467 aatatgatataatctaaatcaccagaatactcttgcttctggatctgcaacgttgacgtccaaatcattgattga 15344393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 15433532 - 15433458
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||| ||||||||||||| |||||||| || ||||| || |||||| |||||||||||||||||||||||    
T  15433532 aatatgatataatctaaatcaccagaatactcttgcttctggatctgcaacgttgacgtccaaatcattgattga 15433458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 15524836 - 15524762
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||| ||||||||||||| |||||||| || ||||| || |||||| |||||||||||||||||||||||    
T  15524836 aatatgatataatctaaatcaccagaatactcttgcttctggatctgcaacgttgacgtccaaatcattgattga 15524762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 39657613 - 39657539
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||| |||||||||||||| |||||| |||| ||||| || |||||| |||||||||||||||||||||||    
T  39657613 aatatgatgaaatctaaatcaccagaatacccatgcttctggatctgcaacgttgacgtccaaatcattgattga 39657539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 42046380 - 42046306
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||| |||||||||||||| |||||| |||| ||||| || ||||||||||||| ||||||||||||||||    
T  42046380 aatatgatgaaatctaaatcaccagaatacccatgcttctggatctgcaacattgacgcccaaatcattgattga 42046306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 7 - 129
Target Start/End: Original strand, 43833868 - 43834000
Alignment:
Q  7 tgcaaacaaactcata-cactcatgttaataacatacaacggcaaaatg---------aatatgataaaatctaaatcaccggaatactcatgtttctga 96  Q
    |||||||||||||| | ||| || ||||||| |||||||||||||||||         |||||||||||| |||||||||| ||||||||||| ||||      
T  43833868 tgcaaacaaactcacagcacccaagttaatagcatacaacggcaaaatgcctacaaataatatgataaaaactaaatcaccagaatactcatgcttctag 43833967  T
Q  97 atatgcaacattgacgtccaaatcattgattga 129  Q
    || |||||| |||||||| ||||||||||||||    
T  43833968 atctgcaacgttgacgtctaaatcattgattga 43834000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 58 - 129
Target Start/End: Complemental strand, 21237946 - 21237875
Alignment:
Q  58 atgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||||||||||||| | || ||| |||| ||||| || ||||||||||||||||||||||||||||||    
T  21237946 atgataaaatctaaatcaacagagtacacatgcttctggatctgcaacattgacgtccaaatcattgattga 21237875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 18890629 - 18890703
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||||||||||||||||||  |||||  ||||||||| || |||||| |||||| ||||||||||||||||    
T  18890629 aatatgataaaatctaaatcaccataatacctatgtttctggatctgcaacgttgacgcccaaatcattgattga 18890703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 34609995 - 34609922
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattg 128  Q
    |||||||||||| ||||||||||||||||||||||||   |||| |||||| || ||| |||||||||||||||    
T  34609995 aatatgataaaacctaaatcaccggaatactcatgttctcgaatctgcaacgttcacgcccaaatcattgattg 34609922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 123 - 202
Target Start/End: Complemental strand, 3240459 - 3240380
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||| |||  ||||||||||||| ||||||||||||||| ||| || |||| ||||||||||||| || ||||||    
T  3240459 tgattgactgaagccgatctttcaatattaaccaaacaaacaccacaacaacacgcgaaatcaaacaacgtcgtacaaga 3240380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 123 - 202
Target Start/End: Original strand, 8443521 - 8443600
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||| ||| |||||||||||  |||||||||| ||||| |||| || ||||  ||||||||||||||||||||||    
T  8443521 tgattgactgaagttgatctttcaaattgaaccaaacgaacactgcaacaagacgcggaatcaaacaacgccgcacaaga 8443600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 7198125 - 7198199
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||||||||||||||||||  |||| ||||| ||| | || |||||| ||||| |||||||||||||||||    
T  7198125 aatatgataaaatctaaatcaccaaaatattcatgcttccggatctgcaacgttgacatccaaatcattgattga 7198199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 14585836 - 14585762
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||| |||||||||||||| | |||| |||| ||||| || |||||| ||||||||||||||| |||||||    
T  14585836 aatatgatgaaatctaaatcaccaggatacccatgcttctggatctgcaacgttgacgtccaaatcaatgattga 14585762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 20553171 - 20553245
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||||||| |||| |||||| |||||||||| ||| | || |||||| |||||||||||||||||| ||||    
T  20553171 aatatgataaaacctaagtcaccgaaatactcatgcttccggatctgcaacgttgacgtccaaatcattgcttga 20553245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 20559674 - 20559748
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||||||| |||| |||||| |||||||||| ||| | || |||||| |||||||||||||||||| ||||    
T  20559674 aatatgataaaacctaagtcaccgaaatactcatgcttccggatctgcaacgttgacgtccaaatcattgcttga 20559748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 20571236 - 20571310
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||||||| |||| |||||| |||||||||| ||| | || |||||| |||||||||||||||||| ||||    
T  20571236 aatatgataaaacctaagtcaccgaaatactcatgcttccggatctgcaacgttgacgtccaaatcattgcttga 20571310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 129
Target Start/End: Complemental strand, 37971438 - 37971368
Alignment:
Q  59 tgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||| |||| |||||| |||||||||||||| | || |||||| |||||||||||||||||| ||||    
T  37971438 tgataaaacctaagtcaccgaaatactcatgtttccggatctgcaacgttgacgtccaaatcattgcttga 37971368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 202
Target Start/End: Original strand, 44099928 - 44099993
Alignment:
Q  137 tgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||||||||||| ||||  |||||||||| || |||  |||||||||||||||||||||||    
T  44099928 tgatctttcaatatgaatcaaatgaacaccgcaaaaagacgggaaatcaaacaacgccgcacaaga 44099993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 4809053 - 4808989
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  |||||||||  || ||| ||||||||||||||||||||||||    
T  4809053 gatctttcaatatgaatcaaatgaacaccgcacgaagacggaaaatcaaacaacgccgcacaaga 4808989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 35580546 - 35580482
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||| ||||||||||| ||||| |||||||||| || ||| |||||||||||||| |||||||||    
T  35580546 gatcattcaatatgaatcaaacgaacaccgcaagaagacggaaaatcaaacaacgtcgcacaaga 35580482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 198
Target Start/End: Complemental strand, 8981242 - 8981167
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcac 198  Q
    ||||||||| | | |||||||||||||| || ||||| |||||||||| || |||| |||||||| ||||||||||    
T  8981242 tgattgactgacgctgatctttcaatatcaaacaaacgaacaccgcaacaagacgcgaaatcaaaaaacgccgcac 8981167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 11196973 - 11196914
Alignment:
Q  143 ttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||||| ||||  |||||||||| || ||| ||||||||||||||||||||||||    
T  11196973 ttcaatatgaatcaaatgaacaccgcaagaagacggaaaatcaaacaacgccgcacaaga 11196914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 471096 - 471170
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||||||||||| | |||||| |||| ||| | || |||||| ||||||  |||||||||||||||    
T  471096 aatatgataaaatctaaatcatcagaatacccatgcttccggatctgcaacgttgacgcacaaatcattgattga 471170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 5046912 - 5046838
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||| ||||| |||| | |||| |||||||| ||||| |||||| | ||||||||||| |||||||||    
T  5046912 aatatgataaattctaagtcactgaaatattcatgtttatgaatctgcaacgtcgacgtccaaattattgattga 5046838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 14916118 - 14916191
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||||||||||| |  |||| ||||| ||| | || |||||||| |||||||||||||||||||||    
T  14916118 aatatgataaaatctaaatcaaca-aatattcatgcttccggatctgcaacatggacgtccaaatcattgattga 14916191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 21237852 - 21237790
Alignment:
Q  140 tctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||||||| ||||| |||| || |||| || |||||||||||| |||||||    
T  21237852 tctttcaatatgaaccaaacgaacactgcaacaagacgcgaagtcaaacaacgccccacaaga 21237790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 31013538 - 31013612
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||  ||| |||| | ||||| |||| ||| |||| |||||| |||||||||||||||||||||||    
T  31013538 aatatgataaaacttaagtcactgaaatacacatgcttccgaatctgcaacgttgacgtccaaatcattgattga 31013612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 125 - 191
Target Start/End: Complemental strand, 39450618 - 39450552
Alignment:
Q  125 attgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaac 191  Q
    ||||||| ||| ||||||||||| |  |||||||| |||||| |||||||||| |||||||||||||    
T  39450618 attgacttaagttgatctttcaaaaataaccaaacgaacaccacaataaaacggaaaatcaaacaac 39450552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 9637339 - 9637412
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattg 128  Q
    |||||||||||| |||| | |||| |||||||||||||| |||| |||||| ||||||  ||||||||| ||||    
T  9637339 aatatgataaaacctaagttaccgaaatactcatgtttccgaatctgcaacgttgacgctcaaatcattaattg 9637412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 193
Target Start/End: Original strand, 24099266 - 24099335
Alignment:
Q  124 gattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgc 193  Q
    |||||||| ||| |||| |||||||||||||||||  |||||||||| || | || ||||||||||||||    
T  24099266 gattgactgaagctgatttttcaatatgaaccaaatgaacaccgcaacaagatgcgaaatcaaacaacgc 24099335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 9619352 - 9619416
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  |||||||||  || |||  |||||||||||||||||||||||    
T  9619352 gatctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccgcacaaga 9619416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 202
Target Start/End: Complemental strand, 34611934 - 34611829
Alignment:
Q  95 gaatatgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgcc 194  Q
    |||| |||||| |||||| ||||||| |||||||| | |   | ||||||||||||||| ||||  |||||||||  |  ||| ||||||||||||||||    
T  34611934 gaatctgcaacgttgacgcccaaatctttgattgaattac--ttatctttcaatatgaatcaaatgaacaccgcacgacgacggaaaatcaaacaacgcc 34611837  T
Q  195 gcacaaga 202  Q
    ||||||||    
T  34611836 gcacaaga 34611829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 43192341 - 43192405
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||| ||||| ||||  |||||| ||| || ||| ||||||||||||||||||||||||    
T  43192341 gatctttcaaaatgaatcaaatgaacaccacaagaagacggaaaatcaaacaacgccgcacaaga 43192405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 202
Target Start/End: Original strand, 23851453 - 23851553
Alignment:
Q  100 tgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcaca 199  Q
    |||||| |||||||||||||| ||||||||  ||  |  ||||||||||||||| ||||  |||||||||  || |||  ||||||||||||| ||||||    
T  23851453 tgcaacgttgacgtccaaatctttgattgaacaatcg--atctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgtcgcaca 23851550  T
Q  200 aga 202  Q
    |||    
T  23851551 aga 23851553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 202
Target Start/End: Complemental strand, 28239958 - 28239858
Alignment:
Q  100 tgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcaca 199  Q
    |||||| ||||||  |||||| |||||||| |||   |||||||||||||| || ||||  |||||||||| || |||   |||||||||||||||||||    
T  28239958 tgcaacgttgacgctcaaatctttgattgaataat--tgatctttcaatattaatcaaatgaacaccgcaacaatacgaggaatcaaacaacgccgcaca 28239861  T
Q  200 aga 202  Q
    |||    
T  28239860 aga 28239858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 123 - 202
Target Start/End: Complemental strand, 34609911 - 34609833
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||| ||| ||||||||||||  ||| ||||| |||||||||| || || |||||||||| |||| |||||||||    
T  34609911 tgattgactgaagttgatctttcaat-ggaaacaaacgaacaccgcaacaagacacaaaatcaaataacgtcgcacaaga 34609833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 202
Target Start/End: Original strand, 42447986 - 42448086
Alignment:
Q  100 tgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcaca 199  Q
    |||||| |||||| ||||||| |||||||| |||  |  || |||||||||||| ||||  |||||||||  || ||| |||||||||||| ||||||||    
T  42447986 tgcaacgttgacgcccaaatctttgattgaataatcg--atatttcaatatgaatcaaatgaacaccgcacgaagacgaaaaatcaaacaatgccgcaca 42448083  T
Q  200 aga 202  Q
    |||    
T  42448084 aga 42448086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 8826370 - 8826296
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||||||| | |||||||| ||| || |||| |||  |||||||||| |||| | ||||||||||||||||    
T  8826370 aatatgataaaaacaaaatcaccagaacacacatgcttccaaatatgcaacgttgatgcccaaatcattgattga 8826296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 16247153 - 16247227
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||| |||||||| ||| || ||||| |||| ||| | || ||||||||||| | ||||||||||||||||    
T  16247153 aatatgatcaaatctaagtcagcgaaatacccatgcttccggatctgcaacattgatgcccaaatcattgattga 16247227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 188
Target Start/End: Original strand, 17693639 - 17693689
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaac 188  Q
    ||||||| |||| |||| ||||||||||||| | |||||||||||||||||    
T  17693639 gatcttttaataggaactaaacaaacaccgcgacaaaacgcaaaatcaaac 17693689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 27498296 - 27498369
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||||||||||||||||| | ||||| ||||||||  ||| |||||  |||||| |||||||||| |||||    
T  27498296 aatatgataaaatctaaatcactgaaatac-catgtttccaaatctgcaatgttgacgcccaaatcattaattga 27498369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 29939459 - 29939385
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||||||| |||| |||| | |||||||||| || || ||||||||| || ||| ||||||||||| ||||    
T  29939459 aatatgataaaacctaagtcactgaaatactcatgcttatggatatgcaacgttaacgcccaaatcattggttga 29939385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 202
Target Start/End: Original strand, 39646198 - 39646276
Alignment:
Q  125 attgactaaaggtgatctttcaatat-gaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||| ||  ||| ||||||||| | |||||||||||||  ||| |||  ||||||||||||||||||||||||||    
T  39646198 attgactatagtagatgtttcaatataggaccaaacaaacactacaacaaattgcaaaatcaaacaacgccgcacaaga 39646276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 40619003 - 40619077
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||| ||| ||  || |||||||||| ||||| || |||||| |||||| |||||| |||||||||    
T  40619003 aatatgataaaatttaagtctgcgaaatactcatgcttctggatctgcaacgttgacgcccaaattattgattga 40619077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 41896676 - 41896602
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||| |||||||||||||| ||||||||||| ||||  || |||||| |||| | | |||||||| |||||    
T  41896676 aatatgatgaaatctaaatcaccagaatactcatgcttctagatctgcaacgttgatgcctaaatcattaattga 41896602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 129
Target Start/End: Complemental strand, 10331272 - 10331176
Alignment:
Q  30 gttaataacatacaacggcaaaatgaatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||||||  |||||||    | ||||||||||||||||  ||||||||||| ||||| || | || | ||||||| ||||| |||||||||    
T  10331272 gttaataacatacaacaacaaaatg---tttataaaatctaaatcactagaatactcatgcttctggatctacaccgttgacgttcaaattattgattga 10331176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 200
Target Start/End: Original strand, 14916197 - 14916274
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaa 200  Q
    ||||||| | ||| || |||||||||||||||||||| |||||||||| || ||   ||||||||||  |||||||||    
T  14916197 tgattgattgaagttggtctttcaatatgaaccaaacgaacaccgcaacaagacatgaaatcaaacagtgccgcacaa 14916274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 15344373 - 15344309
Alignment:
Q  137 tgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||||||||||||| ||| |||||||||| || | |  ||||||||| |||||||||||||    
T  15344373 tgatctttcaatatgaacc-aacgaacaccgcaacaagatgtcaaatcaaactacgccgcacaaga 15344309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 15433438 - 15433374
Alignment:
Q  137 tgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||||||||||||| ||| |||||||||| || | |  ||||||||| |||||||||||||    
T  15433438 tgatctttcaatatgaacc-aacgaacaccgcaacaagatgtcaaatcaaactacgccgcacaaga 15433374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 15524742 - 15524678
Alignment:
Q  137 tgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||||||||||||| ||| |||||||||| || | |  ||||||||| |||||||||||||    
T  15524742 tgatctttcaatatgaacc-aacgaacaccgcaacaagatgtcaaatcaaactacgccgcacaaga 15524678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 2655959 - 2655895
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  |||||||||  || |||  |||||||||||||| ||||||||    
T  2655959 gatctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgctgcacaaga 2655895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 119
Target Start/End: Complemental strand, 5333588 - 5333524
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaat 119  Q
    ||||||| ||||||||||||||  ||||||||||| ||||| || | |||| |||||| ||||||    
T  5333588 aatatgacaaaatctaaatcactagaatactcatgcttctggatctacaacgttgacgcccaaat 5333524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 11464260 - 11464196
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  |||||||||  || ||   |||||||||||||||||||||||    
T  11464260 gatctttcaatatgaatcaaatgaacaccgcacaaagactagaaatcaaacaacgccgcacaaga 11464196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 36532986 - 36532922
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||| |||||||| |||||||  || |||| |  |||||||||||| ||||||||||    
T  36532986 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacaccgcacaaga 36532922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 2e-20; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 55 - 202
Target Start/End: Original strand, 8088144 - 8088302
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcat------------tgattgactaaaggtgatct 142  Q
    ||||||||| ||||||||||||| |||||||| ||||| || || |||||| ||||||||||||||||            ||||||||| ||| ||||||    
T  8088144 aatatgatataatctaaatcaccagaatactcttgtttttggatctgcaacgttgacgtccaaatcattgattgaatctgtgattgactgaagctgatct 8088243  T
Q  143 ttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||||||| ||| ||||| |||| || | || |||||||||||||||||||||||    
T  8088244 ttcaatatgaacc-aacgaacactgcaacaagatgccaaatcaaacaacgccgcacaaga 8088302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 19103399 - 19103473
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||| |||||||||||||||||||||||||| ||||| || ||||| ||||||| ||||||||||||||||    
T  19103399 aatatgatgaaatctaaatcaccggaatactcatgcttctggatctgcaatattgacgcccaaatcattgattga 19103473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 39567426 - 39567352
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||| |||||||||||||| |||||| |||||||||| || |||||  |||||||||||||||||||||||    
T  39567426 aatatgatgaaatctaaatcaccagaatacccatgtttctggatctgcaatgttgacgtccaaatcattgattga 39567352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 81 - 191
Target Start/End: Original strand, 41214604 - 41214714
Alignment:
Q  81 atactcatgtttctgaatatgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaa 180  Q
    ||||||||||||||  |  |||||| ||||||| |||||| |||||||| ||||| |||||||||||||| || |||| |||||| | ||||| |||| |    
T  41214604 atactcatgtttctagaactgcaacgttgacgttcaaatctttgattgattaaagctgatctttcaatataaatcaaagaaacacggaaataagacgcga 41214703  T
Q  181 aatcaaacaac 191  Q
    |||||||||||    
T  41214704 aatcaaacaac 41214714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 14211383 - 14211310
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattg 128  Q
    |||||||| |||||||||||||| |||||| |||| ||||| || |||||| ||||||||||||||||||||||    
T  14211383 aatatgatgaaatctaaatcaccagaatacccatgcttctggatctgcaacgttgacgtccaaatcattgattg 14211310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 139 - 202
Target Start/End: Original strand, 36344487 - 36344550
Alignment:
Q  139 atctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||||||||| ||||  |||||||||| |||||| ||||||||||||||||||||||||    
T  36344487 atctttcaatatgaatcaaatgaacaccgcaaaaaaacggaaaatcaaacaacgccgcacaaga 36344550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 123 - 202
Target Start/End: Original strand, 38110960 - 38111039
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||| ||  |||| |||||||| ||||||||||||||| |||| || || |||||||||||||||||||||||||    
T  38110960 tgattgacttaaattgatatttcaataggaaccaaacaaacactgcaacaagacacaaaatcaaacaacgccgcacaaga 38111039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 13422089 - 13422015
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||| ||| |||||| ||||| |||| ||| |||| ||||||||||||| ||||||||||||||||    
T  13422089 aatatgataaaatataagtcaccgaaatacacatgcttcagaatctgcaacattgacgcccaaatcattgattga 13422015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 100 - 202
Target Start/End: Original strand, 3271361 - 3271461
Alignment:
Q  100 tgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcaca 199  Q
    |||||| |||||||||||||| |||||| | ||| ||  ||||||||||||||| ||||  |||||||||  || ||| ||||||||||||||| |||||    
T  3271361 tgcaacgttgacgtccaaatctttgattaaataatgg--atctttcaatatgaatcaaatgaacaccgcacgaagacggaaaatcaaacaacgctgcaca 3271458  T
Q  200 aga 202  Q
    |||    
T  3271459 aga 3271461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 139 - 202
Target Start/End: Original strand, 10332576 - 10332639
Alignment:
Q  139 atctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||||||||| ||||||||||| |||| || |||| ||||||||||| |||||||||||    
T  10332576 atctttcaatatgaatcaaacaaacactgcaacaagacgcgaaatcaaacaatgccgcacaaga 10332639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 100 - 202
Target Start/End: Complemental strand, 34881838 - 34881738
Alignment:
Q  100 tgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcaca 199  Q
    |||||| |||||| ||||||| |||||||| |||   ||||||||||||||||| ||||  |||||||||  || |||  ||||||||||||||||||||    
T  34881838 tgcaacgttgacgcccaaatctttgattgaataat--tgatctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccgcaca 34881741  T
Q  200 aga 202  Q
    |||    
T  34881740 aga 34881738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 2979238 - 2979312
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||| |||||||||||||| |||||| | || ||||| || |||||| |||||| ||||||||||||||||    
T  2979238 aatatgatgaaatctaaatcaccagaatacccgtgcttctggatctgcaacgttgacgcccaaatcattgattga 2979312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 6217054 - 6216980
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||| ||| |||||| ||||| |||| ||| |||| |||||| |||||| ||||||||||||||||    
T  6217054 aatatgataaaatttaagtcaccgaaatacacatgcttccgaatctgcaacgttgacgcccaaatcattgattga 6216980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 28540838 - 28540912
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||| ||||||||||||||  ||||| |||| ||||| || |||||| |||||| ||||||||||||||||    
T  28540838 aatatgatgaaatctaaatcaccaaaatacccatgcttctggatctgcaacgttgacgcccaaatcattgattga 28540912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 41630658 - 41630584
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||||||| |||| | ||||| |||| ||||| || |||||| |||||| ||||||||||||||||    
T  41630658 aatatgataaaatctaagtcacggaaatacacatgcttctggatgtgcaacgttgacgcccaaatcattgattga 41630584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 30298287 - 30298228
Alignment:
Q  143 ttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||||| |||| ||||||||||| || ||| ||||||||||| ||||||||||||    
T  30298287 ttcaatatgaatcaaataaacaccgcaagaagacggaaaatcaaacagcgccgcacaaga 30298228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 202
Target Start/End: Original strand, 41184399 - 41184499
Alignment:
Q  100 tgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcaca 199  Q
    |||||| |||||| ||||||| |||||||| |||  |  ||||||||||||||| ||||| |||||| ||  || |||  ||||||||||||||||||||    
T  41184399 tgcaacgttgacgcccaaatctttgattgaataatcg--atctttcaatatgaatcaaacgaacaccacacgaagacgggaaatcaaacaacgccgcaca 41184496  T
Q  200 aga 202  Q
    |||    
T  41184497 aga 41184499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 10722917 - 10722843
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||||||| |||||| ||||| |||| || || || | |||| |||||| ||||||||||||||||    
T  10722917 aatatgataaaatctaagtcaccgaaatacccatgcttttggatctacaacgttgacgcccaaatcattgattga 10722843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 26878040 - 26878114
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||||||| |||||  ||||| |||| ||||| || |||||  |||||| ||||||||||||||||    
T  26878040 aatatgataaaatctaagtcaccaaaatacccatgcttctggatctgcaatgttgacgcccaaatcattgattga 26878114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 31391685 - 31391759
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||||||| |||| |||||| |||||||||  ||||| || |||||| |||||| ||||||||||| ||||    
T  31391685 aatatgataaaacctaagtcaccgaaatactcatccttctggatctgcaacgttgacgcccaaatcattggttga 31391759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 199
Target Start/End: Complemental strand, 31314789 - 31314728
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcaca 199  Q
    |||| |||||||||||||||||||||||||||| || | || |||| |||||||||| ||||    
T  31314789 gatcattcaatatgaaccaaacaaacaccgcaacaagaagcgaaataaaacaacgcctcaca 31314728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 202
Target Start/End: Complemental strand, 4954157 - 4954012
Alignment:
Q  56 atatgataaaatctaaatcaccggaatactcatgtt-tctgaatatgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaac 154  Q
    ||||||||||||  || ||||||||||| |||||   || |||| |||||| |||||||||||||| |||||||| |||    |||||||||||| |||     
T  4954157 atatgataaaattaaagtcaccggaatattcatggcctccgaatctgcaacgttgacgtccaaatctttgattgaataa--tcgatctttcaataggaat 4954060  T
Q  155 caaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
     |||  |||||||||| || |||  |||  ||||||||||||||||||    
T  4954059 aaaatgaacaccgcaagaagacgggaaagaaaacaacgccgcacaaga 4954012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 129
Target Start/End: Complemental strand, 13007443 - 13007311
Alignment:
Q  7 tgcaaacaaactcata-cactcatgttaataacatacaacggcaaaatg---------aatatgataaaatctaaatcaccggaatactcatgtttctga 96  Q
    |||||||||||||| | ||| || ||||||| |||||||||||||||||         ||||||||||||  ||| |||||| ||||| |||| ||| |     
T  13007443 tgcaaacaaactcacagcacccaagttaatagcatacaacggcaaaatgcctacaaataatatgataaaacttaagtcaccgaaatacccatgcttccgg 13007344  T
Q  97 atatgcaacattgacgtccaaatcattgattga 129  Q
    || |||||| |||||||||||||||||| ||||    
T  13007343 atctgcaacgttgacgtccaaatcattggttga 13007311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 16981374 - 16981310
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  |||||||||| || ||| ||||| |||||| |||||||||||    
T  16981374 gatctttcaatatgaatcaaaggaacaccgcaagaagacggaaaattaaacaatgccgcacaaga 16981310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 43261818 - 43261878
Alignment:
Q  142 tttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||| |||| ||||||||||| || ||| ||||||||||||| ||||| ||||    
T  43261818 tttcaatatgaatcaaataaacaccgcaagaagacggaaaatcaaacaacaccgcataaga 43261878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 202
Target Start/End: Original strand, 7150294 - 7150394
Alignment:
Q  100 tgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcaca 199  Q
    |||||| |||||||||||||| |||||||| |||   ||||||||||||  |||  |||  |||||||||| || |||  ||| ||||||||||||||||    
T  7150294 tgcaacgttgacgtccaaatctttgattgaataa--ttgatctttcaatgggaataaaatgaacaccgcaagaagacgggaaagcaaacaacgccgcaca 7150391  T
Q  200 aga 202  Q
    |||    
T  7150392 aga 7150394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 170
Target Start/End: Complemental strand, 11192510 - 11192422
Alignment:
Q  80 aatactcatgtttctgaatatgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaa 170  Q
    |||||||||||||| | || | |||| |||||  |||||||||| ||||| |||   || ||||||||||||||||||||| |||||||||    
T  11192510 aatactcatgtttccggatctacaacgttgacacccaaatcatttattgaataac--tggtctttcaatatgaaccaaacagacaccgcaa 11192422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 123 - 170
Target Start/End: Complemental strand, 31364547 - 31364500
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaa 170  Q
    |||||||||  || ||||| ||||||||||||||||||||||||||||    
T  31364547 tgattgactggagctgatcattcaatatgaaccaaacaaacaccgcaa 31364500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 34945549 - 34945475
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||  ||| |||||| ||||| |||| ||| | || |||||| |||||||||||||||||| ||||    
T  34945549 aatatgataaaacttaagtcaccgaaatacccatgcttccggatctgcaacgttgacgtccaaatcattggttga 34945475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 35850860 - 35850810
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaac 188  Q
    |||||||||||| |||  ||||||||||||| ||||||||| |||||||||    
T  35850860 gatctttcaataggaaataaacaaacaccgcgataaaacgcgaaatcaaac 35850810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 38597953 - 38597879
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||||||| |||| |||| | ||||| |||| ||| | || |||||| |||||||||||||||||| ||||    
T  38597953 aatatgataaaacctaagtcactgaaatacccatgcttccggatctgcaacgttgacgtccaaatcattggttga 38597879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 16758597 - 16758552
Alignment:
Q  142 tttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaa 187  Q
    |||||||||||||||||| ||||||| || ||||||| ||||||||    
T  16758597 tttcaatatgaaccaaacgaacaccgtaacaaaacgcgaaatcaaa 16758552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 28235670 - 28235605
Alignment:
Q  137 tgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||||||| |||  |||  |||||||||| || | | ||||||||||||||||||||||||    
T  28235670 tgatctttcaataagaataaaatgaacaccgcaagaagatggaaaatcaaacaacgccgcacaaga 28235605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 2057833 - 2057897
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  |||||||||  || |||  ||||||||||||||||| |||||    
T  2057833 gatctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccgcgcaaga 2057897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 7886933 - 7886985
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaa 190  Q
    ||||||| |||||||| || ||||||||||||| || ||| ||||||||||||    
T  7886933 gatcttttaatatgaatcagacaaacaccgcaagaagacggaaaatcaaacaa 7886985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 2e-20; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 29922213 - 29922139
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||||||||||||| ||| | ||||||||||| || |||||| |||||||||||||||||||||||    
T  29922213 aatatgataaaatctaaatcaccagaacaatcatgtttctggatctgcaacgttgacgtccaaatcattgattga 29922139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 29971366 - 29971292
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||||||||||||| ||| | ||||||||||| || |||||| |||||||||||||||||||||||    
T  29971366 aatatgataaaatctaaatcaccagaacaatcatgtttctggatctgcaacgttgacgtccaaatcattgattga 29971292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 53807790 - 53807864
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||| ||||||||||||| |||||||| || ||||| ||||||||| |||||||||||||||||||||||    
T  53807790 aatatgatataatctaaatcaccagaatactcttgcttctggatatgcaacgttgacgtccaaatcattgattga 53807864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 190
Target Start/End: Complemental strand, 4821883 - 4821816
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaa 190  Q
    ||||||||| ||| ||||||||||||||||||||||| |||||||||| || ||||||||||||||||    
T  4821883 tgattgactcaagctgatctttcaatatgaaccaaacgaacaccgcaacaagacgcaaaatcaaacaa 4821816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 129
Target Start/End: Complemental strand, 51923944 - 51923809
Alignment:
Q  4 atatgcaaacaaactcata-cactcatgttaataacatacaacggcaaaatg---------aatatgataaaatctaaatcaccggaatactcatgtttc 93  Q
    |||||| |||||||||| | ||| || ||||||| |||||||||||||||||         |||||||| |||||||||||||| |||||| |||| |||    
T  51923944 atatgcgaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcctacaaataatatgatgaaatctaaatcaccagaatacccatgcttc 51923845  T
Q  94 tgaatatgcaacattgacgtccaaatcattgattga 129  Q
    || || |||||| |||||||||||||||||||||||    
T  51923844 tggatctgcaacgttgacgtccaaatcattgattga 51923809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 123 - 202
Target Start/End: Original strand, 4396346 - 4396425
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||| ||| | ||||||||||||||| ||||| |||||||||| ||  ||||||||||||||||||| |||||||    
T  4396346 tgattgactgaagcttatctttcaatatgaatcaaacgaacaccgcaacaaggcgcaaaatcaaacaacgccacacaaga 4396425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 123 - 202
Target Start/End: Original strand, 12947286 - 12947365
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||| ||| |||| |||||||||||||||||| |||||| ||| || | || |||||||||||||||||||||||    
T  12947286 tgattgactgaagttgatatttcaatatgaaccaaacgaacaccacaacaagatgcgaaatcaaacaacgccgcacaaga 12947365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 42460905 - 42460831
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||||||||||||| ||||  ||||| ||||| || |||||| |||||| ||||||||||||||||    
T  42460905 aatatgataaaatctaaatcaccagaatgttcatgcttctgtatctgcaacgttgacgcccaaatcattgattga 42460831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 51303575 - 51303649
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||| |||||||||||||| |||||| |||| ||||| || |||||| |||||| ||||||||||||||||    
T  51303575 aatatgatgaaatctaaatcaccagaatacccatgcttctggatctgcaacgttgacgcccaaatcattgattga 51303649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 56 - 200
Target Start/End: Complemental strand, 31794230 - 31794088
Alignment:
Q  56 atatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaacc 155  Q
    ||||||||||||  || | |||||||||||||||  || |||| |||||| |||| | ||||||| |||||||| |||    |||||||||||||||| |    
T  31794230 atatgataaaattaaactgaccggaatactcatgcctccgaatctgcaacgttgatgcccaaatctttgattgaataa--tcgatctttcaatatgaatc 31794133  T
Q  156 aaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaa 200  Q
    |||  |||||||||| || |   ||||||||||||||||||||||    
T  31794132 aaatgaacaccgcaacaagatagaaaatcaaacaacgccgcacaa 31794088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 8914922 - 8914794
Alignment:
Q  11 aacaaactcata-cactcatgttaataacatacaacggcaaaatg---------aatatgataaaatctaaatcaccggaatactcatgtttctgaatat 100  Q
    |||||||||| | |||||| ||||||| |||||||||||||||||         |||||||| |||||||||||||| |||||| |||  ||||| || |    
T  8914922 aacaaactcacatcactcaagttaatagcatacaacggcaaaatgcctacaaataatatgatgaaatctaaatcaccagaatacacattcttctggatct 8914823  T
Q  101 gcaacattgacgtccaaatcattgattga 129  Q
    ||||| |||||| ||||||||||||||||    
T  8914822 gcaacgttgacgcccaaatcattgattga 8914794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 36734687 - 36734751
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||| |||||| ||||  ||||||||||||| ||| ||||||||||||||||||||||||    
T  36734687 gatctttcattatgaatcaaatgaacaccgcaataagacggaaaatcaaacaacgccgcacaaga 36734751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 21313192 - 21313118
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatg-tttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||||||| |||||| |||||||||| |||| | |||||| || |||||||||||||||||||||||    
T  21313192 aatatgataaaatctaagtcaccgaaatactcatgatttcag-atatgctacgttgacgtccaaatcattgattga 21313118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 123 - 202
Target Start/End: Complemental strand, 35175480 - 35175401
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||| ||| |||||||||||||| |||||||| |||||||||| || ||   |||||||||||||| ||||||||    
T  35175480 tgattgactgaagctgatctttcaatataaaccaaacgaacaccgcaacaagacatgaaatcaaacaacgctgcacaaga 35175401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 628855 - 628929
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||| ||||||||||||| |||||||| || ||||| || | |||| |||| ||||||||||||||||||    
T  628855 aatatgatataatctaaatcaccagaatactcttgcttctggatctacaacgttgatgtccaaatcattgattga 628929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 14859646 - 14859572
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||| |||||||||||||| |||  ||||| |||| ||||| || |||||| |||||||||||||||||||||||    
T  14859646 aatacgataaaatctaaattaccaaaatacccatgcttctggatctgcaacgttgacgtccaaatcattgattga 14859572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 16235582 - 16235508
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||| |||||||||||||| |||||| |||| ||||  || |||||| |||||| ||||||||||||||||    
T  16235582 aatatgatgaaatctaaatcaccagaatacccatgcttcttgatctgcaacgttgacgcccaaatcattgattga 16235508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 43488522 - 43488596
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||||||| ||||||||||| |||||||||| ||| | || |||||| ||||||| |||||||||| ||||    
T  43488522 aatatgataaaacctaaatcaccgaaatactcatgcttccggatctgcaacgttgacgttcaaatcattgcttga 43488596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 53508382 - 53508308
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||||||||||||||||  | |||||||||| || || || |||||  |||||||||||||||||||||||    
T  53508382 aatatgataaaatctaaatcattgtaatactcatgcttttggatgtgcaaagttgacgtccaaatcattgattga 53508308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 202
Target Start/End: Complemental strand, 21488204 - 21488106
Alignment:
Q  102 caacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaag 201  Q
    |||| |||||| ||||||| |||||||| |||  |  || |||||||||||| |||| ||||||||||| || |||  ||||||||||||||||||||||    
T  21488204 caacgttgacgcccaaatctttgattgaataatcg--atttttcaatatgaatcaaataaacaccgcaagaagacgggaaatcaaacaacgccgcacaag 21488107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 42719596 - 42719532
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  |||||||||  || ||| ||||||||||||||||||||||||    
T  42719596 gatctttcaatatgaatcaaatgaacaccgcacgaagacggaaaatcaaacaacgccgcacaaga 42719532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 55 - 95
Target Start/End: Complemental strand, 51487251 - 51487211
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctg 95  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  51487251 aatatgataaaatctaaatcaccagaatactcatgtttctg 51487211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 202
Target Start/End: Complemental strand, 29239419 - 29239340
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||| ||| ||||||| ||||| ||||||||| |||||| ||| || |||  |||||||||| ||||||||||||    
T  29239419 tgattgactgaagctgatcttccaatacgaaccaaacgaacaccacaacaagacgtgaaatcaaacagcgccgcacaaga 29239340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 7448846 - 7448920
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||| |||  ||| |||||| |||||||||| ||| | ||||||||| |||||||||||||||||| ||||    
T  7448846 aatatgatgaaacttaagtcaccgaaatactcatgcttccggatatgcaacgttgacgtccaaatcattggttga 7448920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 7456988 - 7457062
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||| |||  ||| |||||| |||||||||| ||| | ||||||||| |||||||||||||||||| ||||    
T  7456988 aatatgatgaaacttaagtcaccgaaatactcatgcttccggatatgcaacgttgacgtccaaatcattggttga 7457062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 20464902 - 20464976
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||| ||| |||||| |||||||||| ||   ||| ||||||||||||| |||||||||| |||||    
T  20464902 aatatgataaaatttaagtcaccgaaatactcatgctttcaaatctgcaacattgacgcccaaatcatttattga 20464976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 35175560 - 35175486
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||| |||| ||||||| | ||||||||||||||  | || |||||| |||| ||||||||||||||||||    
T  35175560 aatatgatgaaatataaatcatcagaatactcatgttttcggatctgcaacgttgatgtccaaatcattgattga 35175486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 50194267 - 50194341
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||| | |||||||||||| ||||||||||| ||| | || |||||| || ||||||||||||| ||||||    
T  50194267 aatatgatgatatctaaatcaccagaatactcatgcttccggatctgcaacgttaacgtccaaatcatcgattga 50194341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 37040925 - 37040852
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattg 128  Q
    |||||||| |||||||| |||||| |||||||||||||||  ||  |||||||| ||  |||||||||||||||    
T  37040925 aatatgattaaatctaagtcaccgaaatactcatgtttctagatcggcaacattcacacccaaatcattgattg 37040852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 200
Target Start/End: Complemental strand, 44805106 - 44805029
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaa 200  Q
    ||||||||| | | |||| |||||||||| ||||||| |||||||||| || |||  |||| ||||||||||||||||    
T  44805106 tgattgactgaggatgatatttcaatatgcaccaaacgaacaccgcaacaagacgtgaaattaaacaacgccgcacaa 44805029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 12116177 - 12116113
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  |||||||||  || |||  |||||||||||||||||||||||    
T  12116177 gatctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccgcacaaga 12116113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 129
Target Start/End: Original strand, 23799808 - 23799916
Alignment:
Q  30 gttaataacatacaacggcaaaatg---------aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatc 120  Q
    |||||||||||||||||||||||||         ||||||||||||||||| |||  | |||||||||||||  | || |||||| |||||| | |||||    
T  23799808 gttaataacatacaacggcaaaatgcctacaaataatatgataaaatctaagtcattgaaatactcatgttttcggatctgcaacgttgacgccgaaatc 23799907  T
Q  121 attgattga 129  Q
    |||||||||    
T  23799908 attgattga 23799916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 35499193 - 35499257
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  |||||||||  || |||  |||||||||||||||||||||||    
T  35499193 gatctttcaatatgaatcaaatgaacaccgcacaaagacgggaaatcaaacaacgccgcacaaga 35499257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 46934721 - 46934657
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  |||||||||| || |||  |||||||||||| ||||||||||    
T  46934721 gatctttcaatatgaatcaaatgaacaccgcaagaagacgggaaatcaaacaacaccgcacaaga 46934657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 48199933 - 48199861
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgatt 127  Q
    ||||||||||| ||||| |||||| ||| | |||| ||||| || |||||| | |||||||||||||||||||    
T  48199933 aatatgataaattctaagtcaccgaaatgcacatgcttctggatttgcaacgtcgacgtccaaatcattgatt 48199861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 49552219 - 49552283
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||||| ||||  |||  |||||||||| ||||||  |||||||||||||||||||||||    
T  49552219 gatctttcaatgtgaataaaatgaacaccgcaagaaaacgagaaatcaaacaacgccgcacaaga 49552283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 202
Target Start/End: Complemental strand, 22803137 - 22803037
Alignment:
Q  100 tgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcaca 199  Q
    |||||| ||||||  |||||| |||||||| |||   ||||||||||||||||| ||||  ||||||||||  | |||  |||||||||||||||||| |    
T  22803137 tgcaacgttgacgctcaaatctttgattgaataat--tgatctttcaatatgaatcaaatgaacaccgcaacgatacgagaaatcaaacaacgccgcata 22803040  T
Q  200 aga 202  Q
    |||    
T  22803039 aga 22803037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 139 - 202
Target Start/End: Original strand, 26739385 - 26739448
Alignment:
Q  139 atctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||||| |||||||||| ||| | ||| || | |||||||||||| |||||||||||||    
T  26739385 atctttcaataggaaccaaacagacatcacaacaagatgcaaaatcaaacgacgccgcacaaga 26739448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 10233226 - 10233152
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||  ||| |||||| |||||||||||||||| || |||||| ||  |||| ||||||||| ||||    
T  10233226 aatatgataaaacttaagtcaccgaaatactcatgtttctggatctgcaacgttatcgtctaaatcattggttga 10233152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 12050580 - 12050654
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||||||| |||| || ||| |||||||||||||| | || |||||| |||||  ||||||||||| ||||    
T  12050580 aatatgataaaacctaagtccccgaaatactcatgtttccggatctgcaacgttgacacccaaatcattggttga 12050654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 19339331 - 19339258
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||||||| |||| | ||||| |||| ||||| || ||||||||||||  | ||||||||||||||    
T  19339331 aatatgataaaatctaagtcac-gaaatacccatgcttctggatctgcaacattgacacctaaatcattgattga 19339258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 20608831 - 20608905
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||| |||||||||||||||||| ||| |||||| ||| | || |||||| |||| |  |||||||||||||||    
T  20608831 aatataataaaatctaaatcaccgaaattctcatgcttccggatctgcaactttgatgctcaaatcattgattga 20608905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 27706158 - 27706232
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||| |||||||||| ||| | |||| |||| || || ||||||||| |||||| | ||||||||||||||    
T  27706158 aatatgatgaaatctaaataaccaggatacccatgcttgtggatatgcaacgttgacgccgaaatcattgattga 27706232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 36461363 - 36461437
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||||||| ||||||| ||| |||||||||| |||   || || ||| |||||||||||||||||| ||||    
T  36461363 aatatgataaaacctaaatcgccgaaatactcatgcttccagatctgtaacgttgacgtccaaatcattgcttga 36461437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 52923049 - 52923123
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||  ||| |||||| ||||| |||| ||| | || |||||| |||||||||||||||||| ||||    
T  52923049 aatatgataaaacttaagtcaccgaaatacccatgcttccggatctgcaacgttgacgtccaaatcattggttga 52923123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 53099946 - 53099872
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||| |||||||||| |||| ||||| | |||| ||| | ||||| ||| |||||| ||||||||||||||||    
T  53099946 aatatgctaaaatctaagtcactggaattcacatgcttccggatatgtaacgttgacgcccaaatcattgattga 53099872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 29922119 - 29922054
Alignment:
Q  137 tgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||||| ||| | ||||||||| || |||| ||||||||| ||| | |||||||    
T  29922119 tgatctttcaatatgaacgaaatatacaccgcaacaagacgcgaaatcaaacgacgtcacacaaga 29922054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 29971272 - 29971207
Alignment:
Q  137 tgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||||| ||| | ||||||||| || |||| ||||||||| ||| | |||||||    
T  29971272 tgatctttcaatatgaacgaaatatacaccgcaacaagacgcgaaatcaaacgacgtcacacaaga 29971207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 20608915 - 20608975
Alignment:
Q  127 tgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaa 187  Q
    ||||||| | |||| |||||||| |||| ||||||||||||| | || |||||||||||||    
T  20608915 tgactaatgttgatatttcaataggaactaaacaaacaccgcgacaagacgcaaaatcaaa 20608975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 22290998 - 22290950
Alignment:
Q  143 ttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaac 191  Q
    ||||||| ||||||||| |||||||||| || | |||||||||||||||    
T  22290998 ttcaataagaaccaaacgaacaccgcaacaagatgcaaaatcaaacaac 22290950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 25162515 - 25162451
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  |||||||||  || | |  |||||||||||||||||||||||    
T  25162515 gatctttcaatatgaaacaaatgaacaccgcacgaagatgggaaatcaaacaacgccgcacaaga 25162451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 2e-20; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 55 - 202
Target Start/End: Complemental strand, 14423492 - 14423333
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgatt------------gactaaaggtgatct 142  Q
    ||||||||||||||||| | |||  ||||| |||||||||  || |||||| |||||||||||||||||||||            ||||||||  |||||    
T  14423492 aatatgataaaatctaactaacctaaatacccatgtttctagatttgcaacgttgacgtccaaatcattgattaaatctgtaattgactaaagtcgatct 14423393  T
Q  143 ttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||| ||||||||||||||||||||||||| |  |||||||||||||  ||||||||    
T  14423392 ttcaataagaaccaaacaaacaccgcaataaaatgtgaaatcaaacaacgatgcacaaga 14423333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 100 - 202
Target Start/End: Complemental strand, 18113991 - 18113891
Alignment:
Q  100 tgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcaca 199  Q
    |||||| ||||| ||||||||||| ||||| |||   |||| ||||||||||||||| |  ||||||||||||| ||| |||||||||||||||||||||    
T  18113991 tgcaacgttgacatccaaatcatttattgaataac--tgatatttcaatatgaaccatattaacaccgcaataagacggaaaatcaaacaacgccgcaca 18113894  T
Q  200 aga 202  Q
    |||    
T  18113893 aga 18113891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 65 - 202
Target Start/End: Original strand, 32448562 - 32448710
Alignment:
Q  65 aatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcat------------tgattgactaaaggtgatctttcaatatga 152  Q
    ||||||||||||| |||||||| || ||||| || |||||| ||||||||||||||||            ||||||||| ||| ||||||||||||||||    
T  32448562 aatctaaatcaccagaatactcttgcttctggatctgcaacgttgacgtccaaatcattgattgaatctgtgattgactgaagctgatctttcaatatga 32448661  T
Q  153 accaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||| ||| |||||||||| || | || ||||||||||||| |||||||||    
T  32448662 acc-aacgaacaccgcaacaagatgccaaatcaaacaacggcgcacaaga 32448710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 10237149 - 10237223
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||| |||||||||||| | |||||| |||| ||||| || |||||| |||||||||||||||||||||||    
T  10237149 aatatgatgaaatctaaatcatcagaatacccatgcttctggatctgcaacgttgacgtccaaatcattgattga 10237223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 14955696 - 14955622
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||||||||||| | |||||| |||||||||| || |||||| ||||||  |||||||||||||||    
T  14955696 aatatgataaaatctaaatcatcagaatacacatgtttctggatctgcaacgttgacgctcaaatcattgattga 14955622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 202
Target Start/End: Original strand, 17249080 - 17249238
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga------------ctaaaggtgatct 142  Q
    ||||||||| ||||||||||||| |||||||| || || || || |||||| |||||||||||||||||||||||            || ||  ||||||    
T  17249080 aatatgatataatctaaatcaccagaatactcttgcttatggatctgcaacgttgacgtccaaatcattgattgaatctgtgattgactgaaactgatct 17249179  T
Q  143 ttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||||||| |||||||||||||| || | || |||| |||| |||||||||||||    
T  17249180 ttcaatatgaacc-aacaaacaccgcaacaagatgccaaataaaactacgccgcacaaga 17249238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 200
Target Start/End: Complemental strand, 24461527 - 24461450
Alignment:
Q  126 ttgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaa---aatcaaacaacgccgcacaa 200  Q
    |||||| ||| ||||||||||||||||||||||| |||||||||| ||  |||||   ||||||||||||||||||||    
T  24461527 ttgactgaagttgatctttcaatatgaaccaaacgaacaccgcaacaaggcgcaaaataatcaaacaacgccgcacaa 24461450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 123 - 202
Target Start/End: Original strand, 29574641 - 29574720
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||| ||| | ||||||||||||||| ||||||||||| |||| |||| |  ||||||||||| |||||||||||    
T  29574641 tgattgactgaagctaatctttcaatatgaatcaaacaaacactgcaacaaaatgtgaaatcaaacaatgccgcacaaga 29574720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 1421843 - 1421769
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||||||| ||||||||||| ||||| |||| ||| | || |||||| |||||||||||||||||| ||||    
T  1421843 aatatgataaaacctaaatcaccgaaatacccatgcttccggatctgcaacgttgacgtccaaatcattgcttga 1421769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 6436774 - 6436700
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||| |||| |||  || |||||||||||| | || || |||||||||||||||||||||||||||    
T  6436774 aatatgataaaatttaaaccactagattactcatgtttcaggatctgtaacattgacgtccaaatcattgattga 6436700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 10929832 - 10929758
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||| ||||||||| |||||| |||| ||| | || |||||| |||| ||||||||||||||||||    
T  10929832 aatatgataaaatttaaatcaccagaatacacatgcttccggatctgcaacgttgatgtccaaatcattgattga 10929758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 29279503 - 29279577
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||| ||| |||||| || ||||||||||| | || |||||||||||||  |||||||||||||||    
T  29279503 aatatgataaaatttaagtcaccgaaaaactcatgtttccggatctgcaacattgacgcacaaatcattgattga 29279577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 34128702 - 34128776
Alignment:
Q  128 gactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||  ||||||| |||| |||||||||||||||| ||| || ||||| |||||||||||| |||||||||    
T  34128702 gactaaagtcgatcttttaataggaaccaaacaaacaccacaacaagacgcacaatcaaacaacgtcgcacaaga 34128776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 125 - 189
Target Start/End: Complemental strand, 4264557 - 4264493
Alignment:
Q  125 attgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaaca 189  Q
    ||||||| ||| ||||||||||||| ||||||||  ||||||||||||| |||| ||||||||||    
T  4264557 attgactgaagttgatctttcaataagaaccaaatgaacaccgcaataagacgcgaaatcaaaca 4264493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 9986337 - 9986401
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  |||||||||  || ||| ||||||||||||||||||||||||    
T  9986337 gatctttcaatatgaatcaaatgaacaccgcacgaagacggaaaatcaaacaacgccgcacaaga 9986401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 26025405 - 26025469
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||| ||||| ||||  |||||||||| || ||| ||||||||||||||||||||||||    
T  26025405 gatctttcaagatgaatcaaatgaacaccgcaagaagacgaaaaatcaaacaacgccgcacaaga 26025469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 33585606 - 33585742
Alignment:
Q  3 aatatgcaaacaaactcata-cactcatgttaataacatacaacggcaaaatg---------aatatgataaaatctaaatcaccggaatactcatgttt 92  Q
    ||||||| |||||||||| | ||| || ||||||| |||||||||||||||||         ||||||||||||  |||||||||| | |||||||| ||    
T  33585606 aatatgcgaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcatacaaataatatgataaaacttaaatcaccgaattactcatgctt 33585705  T
Q  93 ctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    | | || |||||| |||||||||||||||||| ||||    
T  33585706 ccggatctgcaacgttgacgtccaaatcattgcttga 33585742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 202
Target Start/End: Original strand, 7015670 - 7015770
Alignment:
Q  100 tgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcaca 199  Q
    |||||| |||||| ||||||| |||||||| |||  |  || |||||||||||| ||||  |||||||||  || ||| |||||||||||||||||||||    
T  7015670 tgcaacgttgacgcccaaatctttgattgaataatcg--atatttcaatatgaatcaaatgaacaccgcacgaagacggaaaatcaaacaacgccgcaca 7015767  T
Q  200 aga 202  Q
    |||    
T  7015768 aga 7015770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 202
Target Start/End: Complemental strand, 30420763 - 30420700
Alignment:
Q  139 atctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||||||||| ||||  |||||||||  || ||| ||||||||||||||||||||||||    
T  30420763 atctttcaatatgaatcaaatgaacaccgcacgaagacggaaaatcaaacaacgccgcacaaga 30420700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 31210540 - 31210614
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatg-tttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||||||| ||||||||||| ||||| |||| |||||| || |||||| |||||||||||||||||| ||||    
T  31210540 aatatgataaaacctaaatcaccgaaatacccatgctttctg-atctgcaacgttgacgtccaaatcattgcttga 31210614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 202
Target Start/End: Original strand, 37614121 - 37614184
Alignment:
Q  139 atctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||||||||| ||||  |||||||||| || ||| |||||||||||||| |||||||||    
T  37614121 atctttcaatatgaatcaaatgaacaccgcaacaagacggaaaatcaaacaacgacgcacaaga 37614184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 3309112 - 3309038
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||| |||| ||||||||| |||||| |||| ||||| || |||||| || ||| ||||||||||||||||    
T  3309112 aatatgatgaaatataaatcaccagaatacccatgcttctggatctgcaacgttaacgcccaaatcattgattga 3309038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 138 - 188
Target Start/End: Original strand, 4904173 - 4904223
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaac 188  Q
    |||||||||||||||||||||| |||||||||| || || |||||||||||    
T  4904173 gatctttcaatatgaaccaaacgaacaccgcaacaagacacaaaatcaaac 4904223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 17994663 - 17994737
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||| ||| |||||| |||||  ||| ||| | || |||||| |||||||||||||||||||||||    
T  17994663 aatatgataaaatttaagtcaccgaaatacctatggttccggatgtgcaacgttgacgtccaaatcattgattga 17994737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 202
Target Start/End: Original strand, 23933552 - 23933711
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcat------------tgattgactaaaggtgatct 142  Q
    ||||||||||||||||||||||| || ||  |||| |||   ||||| ||| ||||||||||||| ||            ||||||||| ||| ||| ||    
T  23933552 aatatgataaaatctaaatcaccagattatccatgcttccagatatgtaacgttgacgtccaaataattgattgaatctgtgattgactgaagttgaact 23933651  T
Q  143 ttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||| ||||||||| |||||||||| || | ||||| ||||||||| ||||||||||    
T  23933652 ttcaataagaaccaaacgaacaccgcaacaagatgcaaattcaaacaacaccgcacaaga 23933711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 101 - 202
Target Start/End: Complemental strand, 34599108 - 34599009
Alignment:
Q  101 gcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaa 200  Q
    ||||| |||||| ||||||| |||||||| |||  |  ||||||||||||||| ||||  |||||||||  || | | ||||||||||||||||||||||    
T  34599108 gcaacgttgacgcccaaatctttgattgaataatcg--atctttcaatatgaatcaaatgaacaccgcacgaagatggaaaatcaaacaacgccgcacaa 34599011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 37994451 - 37994377
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||||||||||||||||||| || |  ||| | || ||||||  |||||||||||||||| |||||    
T  37994451 aatatgataaaatctaaatcaccggaatattctttcttccggatctgcaacgctgacgtccaaatcattcattga 37994377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 200
Target Start/End: Original strand, 3269070 - 3269168
Alignment:
Q  100 tgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcaca 199  Q
    |||||| |||||| ||||||| |||||||| |||  |  ||||||||||||||| ||||  |||||||||  || ||| |||||||||||||||| ||||    
T  3269070 tgcaacgttgacgcccaaatctttgattgaataatcg--atctttcaatatgaatcaaatgaacaccgcacgaagacggaaaatcaaacaacgccccaca 3269167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 200
Target Start/End: Original strand, 3269629 - 3269727
Alignment:
Q  100 tgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcaca 199  Q
    |||||| |||||| ||||||| |||||||| |||  |  ||||||||||||||| ||||  |||||||||  || ||| |||||||||||||||| ||||    
T  3269629 tgcaacgttgacgcccaaatctttgattgaataatcg--atctttcaatatgaatcaaatgaacaccgcacgaagacggaaaatcaaacaacgccccaca 3269726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 200
Target Start/End: Original strand, 3270188 - 3270286
Alignment:
Q  100 tgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcaca 199  Q
    |||||| |||||| ||||||| |||||||| |||  |  ||||||||||||||| ||||  |||||||||  || ||| |||||||||||||||| ||||    
T  3270188 tgcaacgttgacgcccaaatctttgattgaataatcg--atctttcaatatgaatcaaatgaacaccgcacgaagacggaaaatcaaacaacgccccaca 3270285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 459269 - 459333
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  |||||||||| || ||| |||||||||||||| || ||||||    
T  459269 gatctttcaatatgaatcaaatgaacaccgcaacaagacggaaaatcaaacaacgtcgtacaaga 459333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 2808467 - 2808531
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| || |  |||| ||||| || ||| ||||||||||||||||||||||||    
T  2808467 gatctttcaatatgaatcagatgaacatcgcaagaatacggaaaatcaaacaacgccgcacaaga 2808531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 202
Target Start/End: Original strand, 6358898 - 6358965
Alignment:
Q  137 tgatctttcaatatgaaccaaacaaacaccg--caataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||||||| |||||||||||||||||  ||| || | || |||||||||||||| ||||||||    
T  6358898 tgatctttcaataagaaccaaacaaacaccgtacaacaagatgcgaaatcaaacaacgctgcacaaga 6358965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 129
Target Start/End: Original strand, 25508967 - 25509075
Alignment:
Q  30 gttaataacatacaacggcaaaatg---------aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatc 120  Q
    |||||||||||||||||||||||||         |||| |||||||||||| ||| || ||||| |||||||| | || |||||| |||||| ||| |||    
T  25508967 gttaataacatacaacggcaaaatgcctacaaataatacgataaaatctaagtcatcgaaatacccatgtttccggatttgcaacgttgacgcccagatc 25509066  T
Q  121 attgattga 129  Q
    |||||||||    
T  25509067 attgattga 25509075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 202
Target Start/End: Original strand, 27249146 - 27249210
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  |||||||||  || |||  |||||||||||||||||||||||    
T  27249146 gatctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccgcacaaga 27249210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 36234094 - 36234030
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  |||||||||  || |||  |||||||||||||||||||||||    
T  36234094 gatctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccgcacaaga 36234030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 31 - 129
Target Start/End: Complemental strand, 4778953 - 4778846
Alignment:
Q  31 ttaataacatacaacggcaaaatg---------aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatca 121  Q
    ||||||||||||||||||||||||         ||||||||||||  ||| |||||| ||||| |||| ||| | || |||||| |||||||||||||||    
T  4778953 ttaataacatacaacggcaaaatgcctacaaataatatgataaaacttaagtcaccgaaatacccatgcttccggatctgcaacgttgacgtccaaatca 4778854  T
Q  122 ttgattga 129  Q
    ||| ||||    
T  4778853 ttggttga 4778846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 202
Target Start/End: Complemental strand, 27949548 - 27949448
Alignment:
Q  100 tgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcaca 199  Q
    |||||| |||||| ||||||| |||||||| |||   ||||||||| ||||||| ||||  |||| ||||| || |||  |||||||||||||||| |||    
T  27949548 tgcaacgttgacgcccaaatctttgattgaataat--tgatctttcgatatgaatcaaatgaacatcgcaagaagacgggaaatcaaacaacgccgtaca 27949451  T
Q  200 aga 202  Q
    |||    
T  27949450 aga 27949448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 125 - 188
Target Start/End: Original strand, 28871803 - 28871866
Alignment:
Q  125 attgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaac 188  Q
    ||||||| ||| ||||||||||||| ||||||||| |||||||| | || |||| |||||||||    
T  28871803 attgactgaagttgatctttcaataggaaccaaacgaacaccgcgacaagacgcgaaatcaaac 28871866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 11812765 - 11812695
Alignment:
Q  128 gactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcac 198  Q
    |||| ||| ||||||||| ||| ||| |||| ||||||||||| || || ||||||||||||||| |||||    
T  11812765 gactgaagctgatctttctataggaatcaaataaacaccgcaacaagacacaaaatcaaacaacgtcgcac 11812695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 16376106 - 16376032
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||| ||||||| |  ||||| |||| || ||||| |||||| |||||| | ||||||||||||||    
T  16376106 aatatgataaaatttaaatcatcataatacacatgcttttgaatctgcaactttgacgccgaaatcattgattga 16376032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 129
Target Start/End: Complemental strand, 25087168 - 25087130
Alignment:
Q  91 ttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||| |||||| |||||||||||||||||||||||    
T  25087168 ttctgaatctgcaacgttgacgtccaaatcattgattga 25087130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 28533887 - 28533961
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||||||||| |||||||| |||||   ||||||||  || |||||  ||||||||||||||||| |||||    
T  28533887 aatatgataaaatccaaatcacccgaatatcaatgtttctagatttgcaaagttgacgtccaaatcatttattga 28533961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 31128713 - 31128787
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||| ||| |||| | |||||||||| ||| | || |||||| |||||| | ||||||||||||||    
T  31128713 aatatgataaaatataagtcactgaaatactcatgcttccggatctgcaacgttgacgcctaaatcattgattga 31128787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 38445238 - 38445188
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaac 188  Q
    |||||||||||| ||||  |||||||||||| ||||||||| |||||||||    
T  38445238 gatctttcaataggaactgaacaaacaccgcgataaaacgcgaaatcaaac 38445188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 41694788 - 41694714
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||||||| ||||| ||||   |||| ||||| || |||||| |||| | ||||||||||||||||    
T  41694788 aatatgataaaatctaagtcaccagaatctacatgcttctgcatctgcaacgttgatgcccaaatcattgattga 41694714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 100 - 129
Target Start/End: Complemental strand, 3241008 - 3240979
Alignment:
Q  100 tgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||||||||||||||||||||    
T  3241008 tgcaacattgacgtccaaatcattgattga 3240979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 36943054 - 36943123
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattg 124  Q
    |||||||||||||  || |||||| ||||| |||||||| | || |||||| |||||| |||||||||||    
T  36943054 aatatgataaaattcaagtcaccgaaatacccatgtttccggatctgcaacgttgacgcccaaatcattg 36943123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 3725266 - 3725202
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||| |||||| ||  || |||  |||||||||||||||| ||||||    
T  3725266 gatctttcaatatgaatcaaacgaacaccacacaaagacgagaaatcaaacaacgccgtacaaga 3725202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 6173718 - 6173654
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  |||||||||  || | | |||||||||||||||| |||||||    
T  6173718 gatctttcaatatgaatcaaatgaacaccgcacaaagatggaaaatcaaacaacgccacacaaga 6173654  T

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Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 119
Target Start/End: Complemental strand, 7646645 - 7646581
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaat 119  Q
    ||||||||||||  ||| |||||| |||||||||| ||| | || |||||| |||||||||||||    
T  7646645 aatatgataaaacttaagtcaccgaaatactcatgcttccggatctgcaacgttgacgtccaaat 7646581  T

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Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 19028849 - 19028921
Alignment:
Q  57 tatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||||| | |||| ||||  |||| ||||| || |||||| ||||||  |||||||||||||||    
T  19028849 tatgataaaatctaagttaccgaaatatccatgcttctggatttgcaacgttgacgctcaaatcattgattga 19028921  T

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Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 195
Target Start/End: Complemental strand, 37994366 - 37994294
Alignment:
Q  123 tgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccg 195  Q
    ||||||||| ||| |||| |||||||||||| ||||  ||||| |||| || | |||||||||||||| ||||    
T  37994366 tgattgactgaagctgatttttcaatatgaatcaaatgaacactgcaacaagatgcaaaatcaaacaatgccg 37994294  T

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Target: scaffold0009 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 55 - 192
Target Start/End: Original strand, 58020 - 58169
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcat------------tgattgactaaaggtgatct 142  Q
    |||||||| |||||||||||||| ||||||||||| ||| | || |||||  ||||||||||||||||            ||||||||| ||| ||||||    
T  58020 aatatgatgaaatctaaatcaccagaatactcatgcttccggatctgcaatgttgacgtccaaatcatcgattgaatctgtgattgactgaagctgatct 58119  T
Q  143 ttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacg 192  Q
    |||| |||||| |||||||||||||||| || ||||||||||||| ||||    
T  58120 ttcagtatgaaacaaacaaacaccgcaacaagacgcaaaatcaaaaaacg 58169  T

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Target: scaffold0039 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 93264 - 93192
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgatt 127  Q
    ||||||||||||| ||||||||| |||||| ||| |||||| || |||||| ||||||||| |||||||||||    
T  93264 aatatgataaaatttaaatcaccagaatacccatatttctggatctgcaacgttgacgtcctaatcattgatt 93192  T

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Target: scaffold0039; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 93169 - 93104
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgc-aaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||||||||| |||||| ||| || || | || |||||||||||||||||||||    
T  93169 gatctttcaatatgaaccaaacgaacaccacaacaagacacgaatatcaaacaacgccgcacaaga 93104  T

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Target: scaffold0042 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 202
Target Start/End: Original strand, 92428 - 92587
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga------------ctaaaggtgatct 142  Q
    ||||||||||||| ||||  ||| |||||| |||| ||||| || | |||| |||||||||||||||||||||||            |||||  ||||||    
T  92428 aatatgataaaatttaaactaccagaatacccatgcttctggatctacaacgttgacgtccaaatcattgattgaatctgtgatttactaaaattgatct 92527  T
Q  143 ttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    ||||||||||||||||| |||||| ||| || |||  ||||||||||||  |||||||||    
T  92528 ttcaatatgaaccaaacgaacaccacaacaagacgtgaaatcaaacaacatcgcacaaga 92587  T

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Target: scaffold0017 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 32679 - 32753
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||||||| |||||| |||||||||| |||   || |||||| |||||||||||||||||| ||||    
T  32679 aatatgataaaatctaagtcaccgaaatactcatgcttccagatctgcaacgttgacgtccaaatcattgcttga 32753  T

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Target: scaffold0015 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 3973 - 4046
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||| ||||||||| |||||| |||||||| | ||||||||| |||||||| ||||||||| ||||    
T  3973 aatatgataaaatttaaatcaccagaatac-catgtttccgtatatgcaacgttgacgtctaaatcattggttga 4046  T

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Target: scaffold0015; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 192
Target Start/End: Original strand, 4081 - 4133
Alignment:
Q  140 tctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacg 192  Q
    |||||||||||||| ||||| |||||| |||||| || | |||||||||||||    
T  4081 tctttcaatatgaatcaaacgaacaccacaataagacacgaaatcaaacaacg 4133  T

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Target: scaffold0888 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 1610 - 1684
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||||||||||||| |||||| |||||||||| || | | || ||||   ||||||||||||||||    
T  1610 aatatgataaaatctaaatcaccagaatacccatgtttctggatctactacgttgatacccaaatcattgattga 1684  T

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Target: scaffold0128 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 36982 - 36908
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    |||||||||||||||||||||| | ||||| |||| |||   ||  |||||||||||| ||||||||||||||||    
T  36982 aatatgataaaatctaaatcactgaaatacccatgcttccagattagcaacattgacgcccaaatcattgattga 36908  T

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Target: scaffold0095 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 125 - 191
Target Start/End: Complemental strand, 9462 - 9396
Alignment:
Q  125 attgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaac 191  Q
    ||||||| ||| ||||||||||| |  |||||||| |||||| |||||||||| |||||||||||||    
T  9462 attgacttaagttgatctttcaaaaataaccaaacgaacaccacaataaaacggaaaatcaaacaac 9396  T

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Target: scaffold0884 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 1851 - 1979
Alignment:
Q  11 aacaaactcata-cactcatgttaataacatacaacggcaaaatg---------aatatgataaaatctaaatcaccggaatactcatgtttctgaatat 100  Q
    |||||||||||| ||| || |||||||||||||||| ||||||||         |||||||||||| ||||||||||| |||||| ||||||  | || |    
T  1851 aacaaactcataacacccaagttaataacatacaacagcaaaatgcctacaaataatatgataaaacctaaatcaccgaaatacttatgttttcggatct 1950  T
Q  101 gcaacattgacgtccaaatcattgattga 129  Q
    ||||| |||||| ||||| ||||| ||||    
T  1951 gcaacgttgacgcccaaaccattggttga 1979  T

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Target: scaffold0064 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 90 - 129
Target Start/End: Original strand, 19041 - 19080
Alignment:
Q  90 tttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  19041 tttctgaatttgcaacattgacctccaaatcattgattga 19080  T

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Target: scaffold0022 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 92 - 202
Target Start/End: Original strand, 83389 - 83497
Alignment:
Q  92 tctgaatatgcaacattgacgtccaaatcattgattgactaaaggtgatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaac 191  Q
    ||||||| |||||| |||||| ||||||| | |||||| |||  |  ||||||||||||||| ||||  || ||||||  || |||  ||||||||||||    
T  83389 tctgaatctgcaacgttgacggccaaatcttcgattgaataatcg--atctttcaatatgaatcaaatgaataccgcacgaagacgagaaatcaaacaac 83486  T
Q  192 gccgcacaaga 202  Q
    |||||||||||    
T  83487 gccgcacaaga 83497  T

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Target: scaffold0121 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 31206 - 31280
Alignment:
Q  55 aatatgataaaatctaaatcaccggaatactcatgtttctgaatatgcaacattgacgtccaaatcattgattga 129  Q
    ||||||||||||||||| |||||| ||||| |||| ||| | || ||||||||||| |  |||||| ||||||||    
T  31206 aatatgataaaatctaagtcaccgaaatacccatgcttccggatctgcaacattgatgctcaaatcgttgattga 31280  T

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Target: scaffold0264 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 20414 - 20455
Alignment:
Q  161 aacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||| |||||| |||||||||||||| |||||||||    
T  20414 aacaccgcaagaaaacggaaaatcaaacaacgtcgcacaaga 20455  T

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Target: scaffold0426 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 6387 - 6323
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||| ||||  |||||||||| || |||  ||||||||||| |||| ||||||    
T  6387 gatctttcaatatgaatcaaatgaacaccgcaagaagacgggaaatcaaacaatgccgtacaaga 6323  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 454014 - 453950
Alignment:
Q  138 gatctttcaatatgaaccaaacaaacaccgcaataaaacgcaaaatcaaacaacgccgcacaaga 202  Q
    |||||||||||||||  ||||  |||||||||| || ||  |||||||||||||||||| |||||    
T  454014 gatctttcaatatgagtcaaatgaacaccgcaacaagactgaaaatcaaacaacgccgcccaaga 453950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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