View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18973_low_4 (Length: 297)

Name: NF18973_low_4
Description: NF18973
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18973_low_4
NF18973_low_4
[»] chr3 (35 HSPs)
chr3 (11-297)||(38257154-38257448)
chr3 (75-147)||(43247651-43247723)
chr3 (75-147)||(4601480-4601552)
chr3 (75-147)||(7824455-7824527)
chr3 (75-147)||(29689483-29689555)
chr3 (75-147)||(51665926-51665998)
chr3 (80-147)||(475282-475348)
chr3 (84-147)||(42392806-42392869)
chr3 (80-147)||(54158326-54158393)
chr3 (80-145)||(9349679-9349744)
chr3 (75-147)||(54151682-54151754)
chr3 (75-146)||(1778906-1778977)
chr3 (80-147)||(36228995-36229062)
chr3 (75-142)||(55018040-55018107)
chr3 (82-147)||(3112996-3113061)
chr3 (75-147)||(28844559-28844632)
chr3 (75-147)||(47635006-47635078)
chr3 (80-147)||(51054761-51054828)
chr3 (80-147)||(52500898-52500965)
chr3 (81-147)||(28458723-28458789)
chr3 (98-143)||(27230744-27230789)
chr3 (80-149)||(35461478-35461547)
chr3 (82-147)||(43775285-43775350)
chr3 (75-147)||(33334663-33334735)
chr3 (95-147)||(55320401-55320453)
chr3 (97-147)||(32001425-32001475)
chr3 (95-149)||(40756726-40756780)
chr3 (80-145)||(7958629-7958694)
chr3 (83-139)||(448884-448940)
chr3 (111-147)||(2590811-2590847)
chr3 (102-145)||(35716995-35717038)
chr3 (78-132)||(43023693-43023747)
chr3 (95-145)||(53182808-53182858)
chr3 (95-147)||(29750696-29750747)
chr3 (107-147)||(41377666-41377706)
[»] chr5 (27 HSPs)
chr5 (75-147)||(12257411-12257483)
chr5 (75-147)||(21018278-21018350)
chr5 (75-147)||(31909386-31909458)
chr5 (75-147)||(35317698-35317770)
chr5 (80-145)||(1191543-1191608)
chr5 (82-147)||(23262606-23262671)
chr5 (75-147)||(13204012-13204084)
chr5 (83-147)||(29265938-29266002)
chr5 (75-124)||(9576985-9577034)
chr5 (80-145)||(17984745-17984810)
chr5 (83-147)||(11124715-11124779)
chr5 (95-147)||(32143415-32143467)
chr5 (81-147)||(4824940-4825006)
chr5 (75-145)||(40177679-40177749)
chr5 (75-147)||(8734051-8734124)
chr5 (95-147)||(2971059-2971111)
chr5 (93-149)||(3386892-3386948)
chr5 (83-145)||(6021055-6021117)
chr5 (95-147)||(2786346-2786397)
chr5 (91-147)||(19181782-19181837)
chr5 (75-139)||(27721486-27721550)
chr5 (95-147)||(28423243-28423295)
chr5 (113-147)||(17465170-17465204)
chr5 (94-143)||(28591355-28591404)
chr5 (107-147)||(4925673-4925713)
chr5 (95-147)||(35546008-35546060)
chr5 (81-145)||(41580078-41580142)
[»] chr2 (37 HSPs)
chr2 (75-147)||(34460424-34460496)
chr2 (75-147)||(42025725-42025798)
chr2 (75-147)||(11816551-11816624)
chr2 (75-147)||(10639607-10639679)
chr2 (75-147)||(23839914-23839986)
chr2 (75-147)||(29659219-29659291)
chr2 (75-147)||(33083555-33083627)
chr2 (75-147)||(37197611-37197683)
chr2 (79-147)||(45125166-45125234)
chr2 (80-147)||(19048814-19048881)
chr2 (80-147)||(19537367-19537434)
chr2 (75-145)||(11708733-11708803)
chr2 (75-147)||(26605679-26605751)
chr2 (75-147)||(27137919-27137991)
chr2 (95-147)||(39831445-39831497)
chr2 (75-145)||(4800931-4801001)
chr2 (81-146)||(20497592-20497657)
chr2 (78-147)||(33001760-33001829)
chr2 (75-147)||(11459770-11459842)
chr2 (95-147)||(42578243-42578295)
chr2 (75-147)||(43778469-43778541)
chr2 (80-147)||(4851380-4851447)
chr2 (82-145)||(16654425-16654488)
chr2 (79-145)||(43684128-43684194)
chr2 (82-147)||(34239821-34239886)
chr2 (75-147)||(39535535-39535607)
chr2 (80-147)||(7275887-7275954)
chr2 (78-147)||(21312263-21312330)
chr2 (107-147)||(13106452-13106492)
chr2 (75-147)||(19816275-19816347)
chr2 (107-147)||(38440198-38440238)
chr2 (95-145)||(7349173-7349223)
chr2 (97-147)||(44181888-44181938)
chr2 (105-146)||(15782674-15782715)
chr2 (87-127)||(12366795-12366835)
chr2 (107-147)||(34234615-34234655)
chr2 (81-145)||(40786212-40786276)
[»] chr1 (38 HSPs)
chr1 (75-148)||(35945852-35945925)
chr1 (83-147)||(13109833-13109897)
chr1 (75-147)||(41808257-41808329)
chr1 (80-145)||(2088908-2088973)
chr1 (75-147)||(5055789-5055861)
chr1 (75-147)||(28455929-28456001)
chr1 (75-147)||(32007129-32007201)
chr1 (75-147)||(41761412-41761484)
chr1 (75-147)||(45813012-45813084)
chr1 (80-147)||(29994384-29994451)
chr1 (80-147)||(41039304-41039371)
chr1 (81-147)||(778635-778701)
chr1 (82-147)||(192477-192542)
chr1 (95-147)||(4066036-4066088)
chr1 (75-147)||(26032856-26032928)
chr1 (75-147)||(35110100-35110172)
chr1 (75-147)||(48660077-48660149)
chr1 (86-145)||(13183179-13183238)
chr1 (80-147)||(49783767-49783834)
chr1 (83-147)||(20811-20875)
chr1 (75-147)||(5943736-5943808)
chr1 (75-147)||(39276405-39276477)
chr1 (83-145)||(7275744-7275806)
chr1 (94-147)||(26264537-26264590)
chr1 (95-147)||(7059542-7059594)
chr1 (87-147)||(13097371-13097431)
chr1 (83-147)||(21939005-21939069)
chr1 (91-138)||(3716682-3716729)
chr1 (105-147)||(4062936-4062978)
chr1 (93-143)||(25931162-25931212)
chr1 (75-144)||(50106200-50106269)
chr1 (107-147)||(9886893-9886933)
chr1 (104-147)||(11688347-11688390)
chr1 (91-137)||(39112005-39112050)
chr1 (80-147)||(46447374-46447445)
chr1 (75-112)||(29587307-29587344)
chr1 (98-147)||(32982351-32982400)
chr1 (95-131)||(16770173-16770209)
[»] chr4 (48 HSPs)
chr4 (75-147)||(1174006-1174078)
chr4 (75-147)||(12735486-12735558)
chr4 (75-147)||(238459-238531)
chr4 (75-147)||(19673930-19674002)
chr4 (75-147)||(26424859-26424931)
chr4 (75-147)||(34739335-34739407)
chr4 (75-147)||(43139907-43139979)
chr4 (75-147)||(45874110-45874182)
chr4 (80-147)||(31015042-31015109)
chr4 (80-147)||(52171991-52172058)
chr4 (75-147)||(28798389-28798461)
chr4 (75-147)||(53457879-53457951)
chr4 (75-147)||(54768433-54768505)
chr4 (80-147)||(19225319-19225386)
chr4 (75-149)||(55214707-55214781)
chr4 (75-144)||(19814160-19814229)
chr4 (95-147)||(1966625-1966677)
chr4 (75-147)||(23417484-23417556)
chr4 (75-147)||(29581045-29581116)
chr4 (80-147)||(18257389-18257456)
chr4 (80-147)||(19849504-19849571)
chr4 (98-145)||(23532125-23532172)
chr4 (94-147)||(51287675-51287729)
chr4 (94-147)||(16555381-16555434)
chr4 (83-144)||(23710337-23710398)
chr4 (82-139)||(39807906-39807963)
chr4 (79-147)||(2075564-2075632)
chr4 (75-143)||(22608040-22608108)
chr4 (79-147)||(33770627-33770695)
chr4 (88-148)||(48822881-48822941)
chr4 (83-147)||(55400291-55400355)
chr4 (76-147)||(37620673-37620744)
chr4 (86-148)||(516456-516518)
chr4 (97-147)||(1125964-1126014)
chr4 (75-145)||(2864751-2864821)
chr4 (97-147)||(12867918-12867968)
chr4 (80-138)||(37134108-37134166)
chr4 (105-147)||(50347330-50347372)
chr4 (78-147)||(12767145-12767214)
chr4 (82-143)||(24517988-24518049)
chr4 (98-147)||(50033460-50033509)
chr4 (95-135)||(41001535-41001575)
chr4 (83-147)||(52768302-52768365)
chr4 (109-147)||(11278067-11278105)
chr4 (94-135)||(37395698-37395739)
chr4 (98-147)||(50035970-50036019)
chr4 (109-149)||(2804609-2804649)
chr4 (98-138)||(41679452-41679492)
[»] scaffold0352 (1 HSPs)
scaffold0352 (80-147)||(8944-9011)
[»] chr7 (44 HSPs)
chr7 (75-149)||(43753752-43753827)
chr7 (78-147)||(48444153-48444222)
chr7 (75-147)||(4106793-4106865)
chr7 (75-147)||(4107364-4107436)
chr7 (75-147)||(25112248-25112320)
chr7 (75-147)||(31770533-31770605)
chr7 (75-147)||(47557836-47557908)
chr7 (55-147)||(11355850-11355950)
chr7 (80-147)||(23358245-23358312)
chr7 (75-145)||(44083995-44084065)
chr7 (75-147)||(2146691-2146763)
chr7 (83-147)||(8439141-8439205)
chr7 (75-147)||(25546276-25546348)
chr7 (83-147)||(38781209-38781273)
chr7 (75-147)||(40058293-40058365)
chr7 (75-147)||(41183870-41183942)
chr7 (75-147)||(47570719-47570791)
chr7 (80-147)||(5587340-5587407)
chr7 (80-147)||(5592301-5592368)
chr7 (75-141)||(27229484-27229551)
chr7 (78-147)||(29484756-29484825)
chr7 (75-147)||(5772820-5772892)
chr7 (75-147)||(28603066-28603138)
chr7 (75-147)||(48146808-48146880)
chr7 (97-147)||(27915581-27915631)
chr7 (75-147)||(7162791-7162861)
chr7 (98-147)||(19630669-19630718)
chr7 (78-147)||(31288225-31288294)
chr7 (75-147)||(35309909-35309981)
chr7 (95-138)||(34763517-34763560)
chr7 (104-147)||(47250252-47250295)
chr7 (83-145)||(15634882-15634944)
chr7 (81-147)||(25872824-25872890)
chr7 (78-147)||(10220474-10220542)
chr7 (95-144)||(38033804-38033853)
chr7 (82-143)||(39513988-39514049)
chr7 (107-147)||(42081620-42081660)
chr7 (83-127)||(46427423-46427467)
chr7 (83-145)||(23036208-23036268)
chr7 (81-147)||(32606331-32606397)
chr7 (98-147)||(35577877-35577926)
chr7 (107-147)||(4001845-4001885)
chr7 (107-147)||(40657616-40657656)
chr7 (75-147)||(43203361-43203433)
[»] scaffold1348 (1 HSPs)
scaffold1348 (75-147)||(863-935)
[»] scaffold0032 (1 HSPs)
scaffold0032 (75-147)||(56536-56608)
[»] chr8 (39 HSPs)
chr8 (75-147)||(3822451-3822523)
chr8 (75-147)||(6602519-6602591)
chr8 (75-147)||(6677972-6678044)
chr8 (75-147)||(32333169-32333241)
chr8 (75-147)||(35779498-35779570)
chr8 (81-147)||(1341-1407)
chr8 (81-147)||(1078649-1078715)
chr8 (80-145)||(7813382-7813447)
chr8 (75-147)||(70524-70596)
chr8 (75-147)||(4530983-4531055)
chr8 (81-141)||(5385399-5385459)
chr8 (75-147)||(28817311-28817383)
chr8 (55-148)||(41849232-41849332)
chr8 (75-147)||(42885229-42885301)
chr8 (80-147)||(13891150-13891217)
chr8 (80-147)||(45264641-45264708)
chr8 (101-147)||(29425432-29425478)
chr8 (95-145)||(31532128-31532178)
chr8 (78-147)||(9775043-9775112)
chr8 (95-148)||(40911295-40911348)
chr8 (82-147)||(42192640-42192705)
chr8 (95-147)||(31695270-31695322)
chr8 (80-147)||(7792721-7792788)
chr8 (98-147)||(9292096-9292145)
chr8 (95-147)||(39303384-39303437)
chr8 (78-147)||(39435340-39435409)
chr8 (80-147)||(18752401-18752468)
chr8 (81-147)||(10963243-10963307)
chr8 (80-147)||(31969721-31969788)
chr8 (82-147)||(6099634-6099699)
chr8 (86-147)||(14400781-14400842)
chr8 (98-149)||(7403694-7403744)
chr8 (97-147)||(20269607-20269657)
chr8 (97-147)||(21056236-21056286)
chr8 (98-147)||(42364703-42364752)
chr8 (98-147)||(44124104-44124153)
chr8 (80-147)||(12534721-12534786)
chr8 (95-147)||(33731465-33731517)
chr8 (97-145)||(40932786-40932834)
[»] chr6 (20 HSPs)
chr6 (75-143)||(21000747-21000815)
chr6 (75-147)||(33621549-33621621)
chr6 (80-147)||(28322992-28323059)
chr6 (86-147)||(19145536-19145597)
chr6 (95-147)||(21037365-21037417)
chr6 (75-147)||(33704271-33704343)
chr6 (80-147)||(361071-361138)
chr6 (80-147)||(4464187-4464254)
chr6 (95-147)||(24619080-24619132)
chr6 (95-147)||(29009651-29009703)
chr6 (95-147)||(35218641-35218693)
chr6 (83-145)||(7014313-7014375)
chr6 (75-147)||(16518478-16518548)
chr6 (83-147)||(22576244-22576308)
chr6 (81-143)||(2959210-2959272)
chr6 (95-147)||(32289420-32289472)
chr6 (97-140)||(10999416-10999459)
chr6 (81-147)||(7487269-7487331)
chr6 (95-147)||(11456048-11456100)
chr6 (95-147)||(28592129-28592181)
[»] scaffold0119 (2 HSPs)
scaffold0119 (80-147)||(13952-14019)
scaffold0119 (80-147)||(19632-19699)
[»] scaffold0038 (1 HSPs)
scaffold0038 (80-147)||(114312-114379)
[»] scaffold0053 (1 HSPs)
scaffold0053 (75-147)||(22218-22290)
[»] scaffold0044 (1 HSPs)
scaffold0044 (80-147)||(9974-10041)
[»] scaffold0360 (2 HSPs)
scaffold0360 (80-135)||(14727-14784)
scaffold0360 (105-148)||(14590-14633)
[»] scaffold0067 (1 HSPs)
scaffold0067 (79-147)||(34877-34946)


Alignment Details
Target: chr3 (Bit Score: 198; Significance: 1e-108; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 11 - 297
Target Start/End: Complemental strand, 38257448 - 38257154
Alignment:
Q  11 ttattctacaattagaagtaacaaaagaagtcaagaagttatagatgccgaaattgcaaggtcggac--------ctgggttcgaacccagaacctcaca 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||        |||||||||||||||||||||||||    
T  38257448 ttattctacaattagaagtaacaaaagaagtcaagaagttatagatgtcgaaattgcaaggtcggacgtcgtgacctgggttcgaacccagaacctcaca 38257349  T
Q  103 attgtgtgtgagtttaatttcagtgaattaccacttcatctaagatatnnnnnnngagtaacaaaagaatacttacttctggataagcaatattaatggt 202  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||       ||||||||||||||||||||||||| |||||||||||||||||||    
T  38257348 attgtgtgtgagtttaatttcagcggattaccacttcatctaagatataaaaaaagagtaacaaaagaatacttacttcttgataagcaatattaatggt 38257249  T
Q  203 gctaaaaatgagctgttnnnnnnnnngttgctaaaaatggagatacagtcattgtaaaagtaatcgagtgaccaaagatattcatacagctcatt 297  Q
    |||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  38257248 gctaaaaatgagctgttaaaaaaaaagttgctaaaaatggagatacagtcattgtaaaagtaatcgagtgaccaaagatattcatacaactcatt 38257154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 43247723 - 43247651
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  43247723 gacctgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 43247651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 4601480 - 4601552
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| |||||||||| ||||||||||||||| |||||||| ||||||| |||||||||||    
T  4601480 gacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcagtggattaccagttcatctaaga 4601552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 7824527 - 7824455
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  7824527 gacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 7824455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 29689555 - 29689483
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  29689555 gacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 29689483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 51665998 - 51665926
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||||||||||| | |||| ||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  51665998 gacctgggttcgaacccgggaccttacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 51665926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 475348 - 475282
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||| | |||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  475348 gggttcgaactcggaacctcacagttgtgtgtgagtttaa-ttcagtgaattaccacttcatctaaga 475282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 147
Target Start/End: Complemental strand, 42392869 - 42392806
Alignment:
Q  84 tcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||| | |||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  42392869 tcgaacccgggacctcacaattgtgtgtgagtttaatttcagtggtttaccacttcatctaaga 42392806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 54158326 - 54158393
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  54158326 gggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 54158393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 145
Target Start/End: Complemental strand, 9349744 - 9349679
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaa 145  Q
    |||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||    
T  9349744 gggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaa 9349679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 54151754 - 54151682
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | |||||||| |||||| |||||||| |||||||| |||||||||||||||||||    
T  54151754 gacccgggttcgaacccgggacctcacagttgtgtatgagtttattttcagtggattaccacttcatctaaga 54151682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 75 - 146
Target Start/End: Original strand, 1778906 - 1778977
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaag 146  Q
    |||| |||||||||||| ||||||||||||||||| ||| |||| ||||| || ||||||||||||||||||    
T  1778906 gacccgggttcgaacccggaacctcacaattgtgtttgaatttattttcaatggattaccacttcatctaag 1778977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 36229062 - 36228995
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||| | |||||||| ||||||||||||||| ||||| || |||||||||||||||||||    
T  36229062 gggttcgaacccgggacctcacagttgtgtgtgagtttattttcaatggattaccacttcatctaaga 36228995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 75 - 142
Target Start/End: Complemental strand, 55018107 - 55018040
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatc 142  Q
    |||| |||||||||||| | |||||||| ||||||||||||||| |||||||| ||||||||||||||    
T  55018107 gacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatc 55018040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 3113061 - 3112996
Alignment:
Q  82 gttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||| | | |||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  3113061 gttcgaacccgggatctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 3112996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 28844559 - 28844632
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagttta-atttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||  |||||||||| |||||||||||||||  |||||||| |||||||||||||||||||    
T  28844559 gacccgggttcgaacctggaacctcacagttgtgtgtgagtttatttttcagtggattaccacttcatctaaga 28844632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 47635078 - 47635006
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||||| |||| ||||| || || ||||| ||||||||||||||  |||||||||||||||||||    
T  47635078 gacctgggttcgaatccaggacctcgcagttatgtgtaagtttaatttcagttgattaccacttcatctaaga 47635006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 51054761 - 51054828
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||| || ||||||| |||||| ||| |||||||||| |||| |||||||||||||||||||    
T  51054761 gggttcgaactcaaaacctcataattgtttgtaagtttaatttaagtggattaccacttcatctaaga 51054828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 52500898 - 52500965
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||   ||||||||| ||||||||||||||| |||||||  |||||||||||||||||||    
T  52500898 gggttcgaacctgaaacctcacagttgtgtgtgagtttattttcagtagattaccacttcatctaaga 52500965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 147
Target Start/End: Original strand, 28458723 - 28458789
Alignment:
Q  81 ggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| ||||||||||||||||| ||| |||| ||||||| |||| | ||||||||||||||||||||    
T  28458723 ggtttgaacccagaacctcacagttgcgtgtaagtttaacttcaataaattaccacttcatctaaga 28458789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 143
Target Start/End: Original strand, 27230744 - 27230789
Alignment:
Q  98 tcacaattgtgtgtgagtttaatttcagtgaattaccacttcatct 143  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||    
T  27230744 tcacagttgtgtgtgaatttaatttcagtgaattaccacttcatct 27230789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 149
Target Start/End: Complemental strand, 35461547 - 35461478
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaagata 149  Q
    |||||||||||| |||||||||| ||||||||||||||| |||| ||  |||| || |||||||||||||    
T  35461547 gggttcgaacccggaacctcacagttgtgtgtgagtttattttctgtagattatcatttcatctaagata 35461478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 43775285 - 43775350
Alignment:
Q  82 gttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||| || ||| |||||| |||| | ||||||||||||||||| |||||||||||||||||||    
T  43775285 gttcgaatccggaatctcacagttgtatttgagtttaatttcagtggattaccacttcatctaaga 43775350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 33334663 - 33334735
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||| ||||||| || | |||||||| |||||||||||||||||||||||  |||| |||||||| |||||    
T  33334663 gacctgagttcgaatccgggacctcacagttgtgtgtgagtttaatttcagtagattatcacttcatataaga 33334735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 95 - 147
Target Start/End: Complemental strand, 55320453 - 55320401
Alignment:
Q  95 acctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||| | ||||||||||||||| |||||||| |||||||||||||||||||    
T  55320453 acctcatagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 55320401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 147
Target Start/End: Complemental strand, 32001475 - 32001425
Alignment:
Q  97 ctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||| ||||||||||||||| ||||||||| |||||||||||| |||||    
T  32001475 ctcacagttgtgtgtgagtttattttcagtgatttaccacttcatataaga 32001425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 40756780 - 40756726
Alignment:
Q  95 acctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaagata 149  Q
    |||||||| ||| |||||||||||||||||||   ||||||||||||||||||||    
T  40756780 acctcacagttgcgtgtgagtttaatttcagtagtttaccacttcatctaagata 40756726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 145
Target Start/End: Original strand, 7958629 - 7958694
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaa 145  Q
    |||||||||||| | |||||||| || ||||| |||||| ||| |||| |||||||||||||||||    
T  7958629 gggttcgaacccgggacctcacagttatgtgtaagtttatttttagtggattaccacttcatctaa 7958694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 139
Target Start/End: Complemental strand, 448940 - 448884
Alignment:
Q  83 ttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttc 139  Q
    |||||||| || |||||||| |||| |||||||||||||| |||| |||||||||||    
T  448940 ttcgaacctaggacctcacagttgtttgtgagtttaattttagtggattaccacttc 448884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 147
Target Start/End: Complemental strand, 2590847 - 2590811
Alignment:
Q  111 tgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||||||||||| |||||||||||||||||||    
T  2590847 tgagtttaatttcagtggattaccacttcatctaaga 2590811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 35716995 - 35717038
Alignment:
Q  102 aattgtgtgtgagtttaatttcagtgaattaccacttcatctaa 145  Q
    ||||||||||||||||||||| | ||| ||||||||||||||||    
T  35716995 aattgtgtgtgagtttaattttaatgatttaccacttcatctaa 35717038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 43023693 - 43023747
Alignment:
Q  78 ctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaatta 132  Q
    ||||||||||| || |||||||||| || |||||||||||||||| |||| ||||    
T  43023693 ctgggttcgaatccggaacctcacatttatgtgtgagtttaatttaagtggatta 43023747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 53182808 - 53182858
Alignment:
Q  95 acctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaa 145  Q
    ||||||||||| |||||||||||||||| || |  ||||||||||||||||    
T  53182808 acctcacaattatgtgtgagtttaattttaggggtttaccacttcatctaa 53182858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 147
Target Start/End: Original strand, 29750696 - 29750747
Alignment:
Q  95 acctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||| ||||| ||||||| |||| ||||| |||||||||||||||||||    
T  29750696 acctcacatttgtgcgtgagttaaatt-cagtggattaccacttcatctaaga 29750747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 147
Target Start/End: Original strand, 41377666 - 41377706
Alignment:
Q  107 tgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||| |||||| | |||||||||||||||||||    
T  41377666 tgtgtgagtttattttcagcggattaccacttcatctaaga 41377706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 8e-24; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 12257411 - 12257483
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||||||||||||||||    
T  12257411 gacctgggttcgaacccaggacctcataattgtgtgtgagtttattttcagtggattaccacttcatctaaga 12257483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 21018278 - 21018350
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  21018278 gacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 21018350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 31909458 - 31909386
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  31909458 gacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 31909386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 35317770 - 35317698
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||| |||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  35317770 gacctggggtcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 35317698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 145
Target Start/End: Complemental strand, 1191608 - 1191543
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaa 145  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||  |||| |||||||||||    
T  1191608 gggttcgaacccgggacctcacaattgtgtgtgagtttaatttcagtggcttacaacttcatctaa 1191543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 23262606 - 23262671
Alignment:
Q  82 gttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||| ||||||| ||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  23262606 gttcgaacctagaaccttacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 23262671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 13204012 - 13204084
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | |||||||| || |||||||||||| |||||||| |||||||||||||||||||    
T  13204012 gacccgggttcgaacccgggacctcacagttatgtgtgagtttattttcagtggattaccacttcatctaaga 13204084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 29265938 - 29266002
Alignment:
Q  83 ttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  29265938 ttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 29266002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 9577034 - 9576985
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttca 124  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  9577034 gacctgggttcgaacccagaacctcacagttgtatgtgagtttaatttca 9576985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 80 - 145
Target Start/End: Complemental strand, 17984810 - 17984745
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaa 145  Q
    |||||||||||| |||||||||| ||||||||||||||||||| ||||  ||| ||||||||||||    
T  17984810 gggttcgaacccggaacctcacagttgtgtgtgagtttaattttagtggcttatcacttcatctaa 17984745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 11124715 - 11124779
Alignment:
Q  83 ttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||||||||| |||| | |||| ||||||||| |||| |||||||||||||||||||    
T  11124715 ttcgaacccagaacctcataattttatgtgggtttaatttgagtggattaccacttcatctaaga 11124779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 147
Target Start/End: Complemental strand, 32143467 - 32143415
Alignment:
Q  95 acctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  32143467 acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 32143415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 147
Target Start/End: Complemental strand, 4825006 - 4824940
Alignment:
Q  81 ggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||| ||||| | |||||||| ||||||||||||||| ||||| || |||||||||||||||||||    
T  4825006 ggttcaaacccgggacctcacagttgtgtgtgagtttattttcaatggattaccacttcatctaaga 4824940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 145
Target Start/End: Original strand, 40177679 - 40177749
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaa 145  Q
    ||||||| ||| ||||| |||| ||||  ||||||||||||||| |||||||| |||||||||||||||||    
T  40177679 gacctggattccaacccggaacttcaccgttgtgtgtgagtttattttcagtggattaccacttcatctaa 40177749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 8734051 - 8734124
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagttt-aatttcagtgaattaccacttcatctaaga 147  Q
    ||||| ||||||||||| |||||||||| ||||  |||||||| || ||||||| |||||||||||||||||||    
T  8734051 gacctaggttcgaacccggaacctcacagttgtacgtgagttttaacttcagtggattaccacttcatctaaga 8734124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 95 - 147
Target Start/End: Original strand, 2971059 - 2971111
Alignment:
Q  95 acctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||| ||||||||||||||| |||| ||| |||||||||||||||||||    
T  2971059 acctcacagttgtgtgtgagtttattttcggtggattaccacttcatctaaga 2971111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 93 - 149
Target Start/End: Complemental strand, 3386948 - 3386892
Alignment:
Q  93 gaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaagata 149  Q
    |||||||| | |||||||||| ||||||||||||| ||||||||||| |||||||||    
T  3386948 gaacctcaaagttgtgtgtgaatttaatttcagtggattaccacttcttctaagata 3386892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 6021055 - 6021117
Alignment:
Q  83 ttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaa 145  Q
    ||||||||| | ||||| || ||||||||||||||| |||||||| |||||||||| ||||||    
T  6021055 ttcgaacccgggacctctcagttgtgtgtgagtttattttcagtggattaccactttatctaa 6021117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 147
Target Start/End: Original strand, 2786346 - 2786397
Alignment:
Q  95 acctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||| |||||| ||||||||||| ||||| |||||||||||||||||||    
T  2786346 acctcacagttgtgtatgagtttaatt-cagtggattaccacttcatctaaga 2786397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 19181782 - 19181837
Alignment:
Q  91 cagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||| ||||| |||||||||||||||||||||||| |||| |||||||| |||||    
T  19181782 cagaacatcacagttgtgtgtgagtttaatttcagtggatta-cacttcatttaaga 19181837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 139
Target Start/End: Original strand, 27721486 - 27721550
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttc 139  Q
    |||| ||||| |||||| | |||||||| |||| ||||| ||||||||||||| |||||||||||    
T  27721486 gacccgggtttgaacccgggacctcacagttgtatgtgaatttaatttcagtggattaccacttc 27721550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 147
Target Start/End: Complemental strand, 28423295 - 28423243
Alignment:
Q  95 acctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||||||||||||||||| |||||| |  ||||||| |||||||||||    
T  28423295 acctcacaattgtgtgtgagttttatttcactatattaccatttcatctaaga 28423243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 147
Target Start/End: Original strand, 17465170 - 17465204
Alignment:
Q  113 agtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||||||||| |||||||||||||||||||    
T  17465170 agtttaatttcagtggattaccacttcatctaaga 17465204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 28591404 - 28591355
Alignment:
Q  94 aacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatct 143  Q
    ||||||||| |||||| |||||||||| ||||||  ||||||||||||||    
T  28591404 aacctcacagttgtgtatgagtttaatgtcagtggtttaccacttcatct 28591355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 147
Target Start/End: Original strand, 4925673 - 4925713
Alignment:
Q  107 tgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||| |||||||||||||||  ||||||||||||||||||    
T  4925673 tgtgtaagtttaatttcagtggtttaccacttcatctaaga 4925713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 147
Target Start/End: Original strand, 35546008 - 35546060
Alignment:
Q  95 acctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||| |||| |||| ||||||||| |||| |||| ||||||||||||||    
T  35546008 acctcacagttgtatgtgggtttaatttaagtggattatcacttcatctaaga 35546060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 145
Target Start/End: Complemental strand, 41580142 - 41580078
Alignment:
Q  81 ggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaa 145  Q
    |||||||| ||  ||||||||| ||||||||  ||||||||| | || |||||||||||||||||    
T  41580142 ggttcgaatccgaaacctcacagttgtgtgtaggtttaattttaatggattaccacttcatctaa 41580078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 8e-24; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 34460424 - 34460496
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| ||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  34460424 gacccgggttcgaacccagaacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 34460496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 42025725 - 42025798
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagt-ttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||    
T  42025725 gacctgagttcgaacccagaacctcacaattgtgtgtgagtcttaatttcagtggactaccacttcatctaaga 42025798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 11816624 - 11816551
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgag-tttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||||||||||| |||||||||| |||| |||||| ||||||||||||| |||||||||||||||||||    
T  11816624 gacctgggttcgaacccggaacctcacagttgtatgtgagttttaatttcagtggattaccacttcatctaaga 11816551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 10639679 - 10639607
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  10639679 gacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 10639607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 23839914 - 23839986
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||||||||||  | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  23839914 gacctgggttcgaacctgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 23839986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 29659291 - 29659219
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||||  |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  29659291 gacccgggttcgaacccatgacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 29659219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 33083627 - 33083555
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  33083627 gacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 33083555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 37197683 - 37197611
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  37197683 gacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 37197611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 45125234 - 45125166
Alignment:
Q  79 tgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||||| | |||||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  45125234 tgggttcgaactcggaacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 45125166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 19048814 - 19048881
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||| | |||||||||||||||||||||||| ||||||||  ||||||||||||||||||    
T  19048814 gggttcgaacccgggacctcacaattgtgtgtgagtttagtttcagtggtttaccacttcatctaaga 19048881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 19537367 - 19537434
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||| |||||||||| ||||||||| ||||| |||||||| |||||||||||||||||||    
T  19537367 gggttcgaacccggaacctcacagttgtgtgtgtgtttattttcagtggattaccacttcatctaaga 19537434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 75 - 145
Target Start/End: Original strand, 11708733 - 11708803
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaa 145  Q
    |||| |||||||||||||| |||||||| ||||||||| ||||| |||||||| |||||||||||||||||    
T  11708733 gacccgggttcgaacccaggacctcacagttgtgtgtgggtttattttcagtggattaccacttcatctaa 11708803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 26605679 - 26605751
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | |||||||| |||||||||| |||| |||||||| |||||||||||||||||||    
T  26605679 gacccgggttcgaacccgggacctcacagttgtgtgtgaatttattttcagtggattaccacttcatctaaga 26605751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 27137991 - 27137919
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||||||||||| | |||| ||| || | ||||||||||||||||||| |||||||||||||||||||    
T  27137991 gacctgggttcgaacccgggaccttacagttttatgtgagtttaatttcagtggattaccacttcatctaaga 27137919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 147
Target Start/End: Complemental strand, 39831497 - 39831445
Alignment:
Q  95 acctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  39831497 acctcacaattgtgtgtgagtttaatttcagtggtttaccacttcatctaaga 39831445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 145
Target Start/End: Original strand, 4800931 - 4801001
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaa 145  Q
    |||||| |||||||||| ||||||| |  || ||||||||||||||| |||||||||||||||||||||||    
T  4800931 gacctgagttcgaacccggaacctcgcggttatgtgtgagtttaattccagtgaattaccacttcatctaa 4801001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 81 - 146
Target Start/End: Complemental strand, 20497657 - 20497592
Alignment:
Q  81 ggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaag 146  Q
    ||||| ||||| ||||||||||||||| ||||||||| |||||||||  |||||||||||||||||    
T  20497657 ggttcaaacccggaacctcacaattgtatgtgagttttatttcagtggtttaccacttcatctaag 20497592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 33001760 - 33001829
Alignment:
Q  78 ctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||| ||| |||||||| || | ||||||||||||||||||| ||||||| |||||||||||    
T  33001760 ctgggttcgaacacaggacctcacagttatatgtgagtttaatttcagtggattaccatttcatctaaga 33001829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 11459770 - 11459842
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | |||||||| ||||||||| ||||| ||||| || |||||||||||||||||||    
T  11459770 gacccgggttcgaacccgggacctcacagttgtgtgtgtgtttattttcaatggattaccacttcatctaaga 11459842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 147
Target Start/End: Original strand, 42578243 - 42578295
Alignment:
Q  95 acctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  42578243 acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 42578295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 43778541 - 43778469
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||||||| |  || ||||| ||||||||||||||| ||||| || |||||||||||||||||||    
T  43778541 gacctgggttcgaacctaagacttcacagttgtgtgtgagtttattttcattggattaccacttcatctaaga 43778469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 4851380 - 4851447
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||| ||||| | |||||||| ||||||||||||||||||| |||| |||||||||||||| ||||    
T  4851380 gggttcaaacccgggacctcacagttgtgtgtgagtttaattttagtggattaccacttcatccaaga 4851447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 145
Target Start/End: Original strand, 16654425 - 16654488
Alignment:
Q  82 gttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaa 145  Q
    |||||||||| |||||||||| ||||||||||||||| ||| |||||||| || ||||||||||    
T  16654425 gttcgaacccggaacctcacagttgtgtgtgagtttatttttagtgaattgccccttcatctaa 16654488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 79 - 145
Target Start/End: Original strand, 43684128 - 43684194
Alignment:
Q  79 tgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaa 145  Q
    ||||||||||||| | ||| ||||||| |||||||||||| ||||| || |||||||||||||||||    
T  43684128 tgggttcgaacccgggaccccacaattatgtgtgagtttattttcactggattaccacttcatctaa 43684194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 34239886 - 34239821
Alignment:
Q  82 gttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||| |||||||| ||| |||||| |||||||||||||| | |||||||||||||| |||||    
T  34239886 gttcgaactcagaaccttacagttgtgtatgagtttaatttcaataaattaccacttcatttaaga 34239821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 39535607 - 39535535
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | |||||||| || | |||||||||||||| || | |||||||||||||||||||    
T  39535607 gacccgggttcgaacccgggacctcacagttttatgtgagtttaatttgagcggattaccacttcatctaaga 39535535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 7275954 - 7275887
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||| | |||||||| |||||||| | |||||||| | || |||||||||||||||||||    
T  7275954 gggttcgaacccgggacctcacagttgtgtgtaaatttaattttaatggattaccacttcatctaaga 7275887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 21312263 - 21312330
Alignment:
Q  78 ctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||| |||||||  | ||||||||||||||  |||||||| ||| ||||||||||||||||||||||||    
T  21312263 ctgggatcgaacctgggacctcacaattgtg--tgagtttatttttagtgaattaccacttcatctaaga 21312330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 147
Target Start/End: Original strand, 13106452 - 13106492
Alignment:
Q  107 tgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||||| |||||||||| ||||||||||||||||||    
T  13106452 tgtgtgagttttatttcagtgatttaccacttcatctaaga 13106492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 19816275 - 19816347
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| ||||| |||||| ||||||| || |||||| |||||||| |||||||  ||||| |||||||||||||    
T  19816275 gacccgggtttgaacccggaacctcgcagttgtgtatgagtttattttcagtagattacaacttcatctaaga 19816347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 147
Target Start/End: Complemental strand, 38440238 - 38440198
Alignment:
Q  107 tgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  38440238 tgtgtgagtttaattttagtggattaccacttcatctaaga 38440198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 145
Target Start/End: Original strand, 7349173 - 7349223
Alignment:
Q  95 acctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaa 145  Q
    ||||||||| | |||||||||||||||| |||| || ||||||||||||||    
T  7349173 acctcacaactatgtgtgagtttaattttagtggatcaccacttcatctaa 7349223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 147
Target Start/End: Complemental strand, 44181938 - 44181888
Alignment:
Q  97 ctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||| ||||||||||||||| |||||||| |||| ||||| ||||||||    
T  44181938 ctcacagttgtgtgtgagtttattttcagtggattatcacttaatctaaga 44181888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 146
Target Start/End: Original strand, 15782674 - 15782715
Alignment:
Q  105 tgtgtgtgagtttaatttcagtgaattaccacttcatctaag 146  Q
    |||||| ||||||||||||||||  |||||||||||||||||    
T  15782674 tgtgtgggagtttaatttcagtggtttaccacttcatctaag 15782715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 12366795 - 12366835
Alignment:
Q  87 aacccagaacctcacaattgtgtgtgagtttaatttcagtg 127  Q
    ||||| |||||||||| ||||||||||||||||| ||||||    
T  12366795 aacccggaacctcacagttgtgtgtgagtttaatatcagtg 12366835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 147
Target Start/End: Original strand, 34234615 - 34234655
Alignment:
Q  107 tgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||||||||||||||  || ||||||||||||||||    
T  34234615 tgtgtgagtttaatttcagtagatcaccacttcatctaaga 34234655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 145
Target Start/End: Complemental strand, 40786276 - 40786212
Alignment:
Q  81 ggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaa 145  Q
    |||||||||| |  ||||| || ||| ||||||||||||||| ||||||||| |||||| |||||    
T  40786276 ggttcgaacctaagacctcgcagttgagtgtgagtttaattttagtgaattatcacttcttctaa 40786212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 5e-22; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 75 - 148
Target Start/End: Original strand, 35945852 - 35945925
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaagat 148  Q
    ||||||||||||||||| |||||||||| |||||||||| |||| |||||||| ||||||||||||||||||||    
T  35945852 gacctgggttcgaacccggaacctcacagttgtgtgtgaatttattttcagtggattaccacttcatctaagat 35945925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 13109833 - 13109897
Alignment:
Q  83 ttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  13109833 ttcgaacctagaacctcacagttgtgtgtgagtttaatttcagtggattaccacttcatctaaga 13109897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 41808257 - 41808329
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| |||||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  41808257 gacccgggttcgaacccggaacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 41808329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 80 - 145
Target Start/End: Complemental strand, 2088973 - 2088908
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaa 145  Q
    |||||||||| ||||||||||||||||| |||||||| |||||||||| |||||||||||||||||    
T  2088973 gggttcgaactcagaacctcacaattgtatgtgagttcaatttcagtggattaccacttcatctaa 2088908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 5055861 - 5055789
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  5055861 gacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 5055789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 28455929 - 28456001
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  28455929 gacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 28456001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 32007129 - 32007201
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  32007129 gacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 32007201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 41761484 - 41761412
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||||| |||||||| ||||||||||||||| |||||||| |||||||||||||| ||||    
T  41761484 gacccgggttcgaacccaggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatccaaga 41761412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 45813084 - 45813012
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  45813084 gacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 45813012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 29994451 - 29994384
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||||||   |||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  29994451 gggttcgaacccgagacctcacaattgtgtgtgagtttaatttcagtggtttaccacttcatctaaga 29994384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 41039371 - 41039304
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  41039371 gggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 41039304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 81 - 147
Target Start/End: Original strand, 778635 - 778701
Alignment:
Q  81 ggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||| || |||| ||| |||||||||||||||||||||||||||||||| |||||||||||    
T  778635 ggttcgaacctaggacctgacagttgtgtgtgagtttaatttcagtgaattaccaattcatctaaga 778701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 192477 - 192542
Alignment:
Q  82 gttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||| |||||||| ||||||||||||||| |||||| | |||||||||||||||||||    
T  192477 gttcgaacccaggacctcacagttgtgtgtgagtttattttcagcggattaccacttcatctaaga 192542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 147
Target Start/End: Original strand, 4066036 - 4066088
Alignment:
Q  95 acctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  4066036 accttacaattgtatgtgagtttaatttcagtgaattaccacttcatctaaga 4066088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 26032856 - 26032928
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||  |||||||||| || ||||||||||||||||||||| |||||| ||||||||||||    
T  26032856 gacccgggttcgaacctggaacctcacagttttgtgtgagtttaatttcagtggattaccgcttcatctaaga 26032928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 35110172 - 35110100
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||||| |||| ||| ||||||||||||||||||| || | |||||||||||||||||||    
T  35110172 gacccgggttcgaacccaggaccttacagttgtgtgtgagtttaatttgagaggattaccacttcatctaaga 35110100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 48660077 - 48660149
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | | |||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  48660077 gacccgggttcgaacccgggatctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 48660149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 145
Target Start/End: Complemental strand, 13183238 - 13183179
Alignment:
Q  86 gaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaa 145  Q
    ||||| ||||||| ||| |||| |||||||||||||||||||||||||||||||||||||    
T  13183238 gaacctagaaccttacagttgtatgtgagtttaatttcagtgaattaccacttcatctaa 13183179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 49783767 - 49783834
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||| |||||||||| |||| ||||| |||||||||||||  ||||||||||||||||||    
T  49783767 gggttcgaacccggaacctcacagttgtatgtgaatttaatttcagtggtttaccacttcatctaaga 49783834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 20811 - 20875
Alignment:
Q  83 ttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||| | |||||||| ||||||||||||||| ||| |||| |||||||||||||||||||    
T  20811 ttcgaacccgggacctcacagttgtgtgtgagtttatttttagtggattaccacttcatctaaga 20875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 5943736 - 5943808
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||| ||| |||||||| |||| |||||||||||||||| || |||| ||||||||||||||    
T  5943736 gacccgggttcgaactcaggacctcacagttgtttgtgagtttaatttcaatggattatcacttcatctaaga 5943808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 39276405 - 39276477
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | |||||||| || |||||||||||| |||||||| ||||||||||||| |||||    
T  39276405 gacccgggttcgaacccgggacctcacagttatgtgtgagtttattttcagtggattaccacttcatttaaga 39276477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 7275744 - 7275806
Alignment:
Q  83 ttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaa 145  Q
    ||||||||| |||| ||||| |||||| |||||||||||||||||  ||||||||||||||||    
T  7275744 ttcgaacccggaacttcacagttgtgtatgagtttaatttcagtggtttaccacttcatctaa 7275806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 147
Target Start/End: Complemental strand, 26264590 - 26264537
Alignment:
Q  94 aacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||| ||||||||||||||||||||| || |||| ||||||||||||||    
T  26264590 aacctcacagttgtgtgtgagtttaatttcaatgtattatcacttcatctaaga 26264537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 95 - 147
Target Start/End: Original strand, 7059542 - 7059594
Alignment:
Q  95 acctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||| ||||||||||||||||||| |||| |||||||||| ||||||||    
T  7059542 acctcacagttgtgtgtgagtttaatttaagtggattaccactttatctaaga 7059594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 87 - 147
Target Start/End: Original strand, 13097371 - 13097431
Alignment:
Q  87 aacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| ||||||||||| |||| |||||||||||||| | || |||||||||||||||||||    
T  13097371 aacctagaacctcacagttgtatgtgagtttaattttattggattaccacttcatctaaga 13097431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 21939005 - 21939069
Alignment:
Q  83 ttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||| |||| |||||||| ||||||| |||||||||||||| |  ||||||||||||||||||    
T  21939005 ttcgaatccaggacctcacagttgtgtgcgagtttaatttcagcggtttaccacttcatctaaga 21939069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 3716682 - 3716729
Alignment:
Q  91 cagaacctcacaattgtgtgtgagtttaatttcagtgaattaccactt 138  Q
    |||||||||||| ||||||||||||||||||| ||| |||||||||||    
T  3716682 cagaacctcacagttgtgtgtgagtttaattttagtaaattaccactt 3716729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 147
Target Start/End: Original strand, 4062936 - 4062978
Alignment:
Q  105 tgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||||||||| ||||||||| ||||||||||||||    
T  4062936 tgtgtgtgagtttaatttgagtgaattatcacttcatctaaga 4062978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 25931212 - 25931162
Alignment:
Q  93 gaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatct 143  Q
    |||| ||||||||||||||||||||||||||| |  |||||||||||||||    
T  25931212 gaacttcacaattgtgtgtgagtttaatttcaatagattaccacttcatct 25931162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 50106269 - 50106200
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatcta 144  Q
    |||| |||||||||||| | |||||||| || |||||||||||| |||||||| ||| ||| ||||||||    
T  50106269 gacccgggttcgaacccgggacctcacagttatgtgtgagtttattttcagtggattgccatttcatcta 50106200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 147
Target Start/End: Complemental strand, 9886933 - 9886893
Alignment:
Q  107 tgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||||| ||| ||||||||||||||||||||||    
T  9886933 tgtgtgagtttaatatcactgaattaccacttcatctaaga 9886893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 147
Target Start/End: Original strand, 11688347 - 11688390
Alignment:
Q  104 ttgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||||||||| |||||||| |||||||||||||| ||||    
T  11688347 ttgtgtgtgagtttattttcagtggattaccacttcatccaaga 11688390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 137
Target Start/End: Original strand, 39112005 - 39112050
Alignment:
Q  91 cagaacctcacaattgtgtgtgagtttaatttcagtgaattaccact 137  Q
    ||||| ||||||||||||||||||||| ||||||||| |||||||||    
T  39112005 cagaatctcacaattgtgtgtgagttt-atttcagtggattaccact 39112050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 46447445 - 46447374
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaa----tttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||| | |||||||| || |||||||||||||    |||||||| |||||||| ||||||||||    
T  46447445 gggttcgaacccgggacctcacagttatgtgtgagtttaattattttcagtggattaccacatcatctaaga 46447374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 112
Target Start/End: Original strand, 29587307 - 29587344
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtg 112  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  29587307 gacctgggttcgaacccgggacctcacaattgtgtgtg 29587344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 32982400 - 32982351
Alignment:
Q  98 tcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||| |||||||||||||| |||||||||  |||| |||||||||||||    
T  32982400 tcacagttgtgtgtgagtttgatttcagtggtttactacttcatctaaga 32982351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 131
Target Start/End: Complemental strand, 16770209 - 16770173
Alignment:
Q  95 acctcacaattgtgtgtgagtttaatttcagtgaatt 131  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  16770209 acctcacagttgtgtgtgagtttattttcagtgaatt 16770173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 1174006 - 1174078
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  1174006 gacctgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 1174078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 12735486 - 12735558
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||||| |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  12735486 gacccgggttcgaacccaggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 12735558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 238531 - 238459
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||| ||||    
T  238531 gacctgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatcgaaga 238459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 19674002 - 19673930
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||||||||||| | ||||||||||| |||| |||||||||||||||| ||||||||||||| |||||    
T  19674002 gacctgggttcgaacccgggacctcacaattatgtgcgagtttaatttcagtggattaccacttcatttaaga 19673930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 26424931 - 26424859
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  26424931 gacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 26424859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 34739335 - 34739407
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  34739335 gacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 34739407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 43139979 - 43139907
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  43139979 gacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 43139907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 45874110 - 45874182
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  45874110 gacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 45874182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 31015042 - 31015109
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||  |||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||    
T  31015042 gggttcgaattcagaacctcacagttgtgtgtgagtttaatttcagtgctttaccacttcatctaaga 31015109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 52172058 - 52171991
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||| || |||||    
T  52172058 gggtttgaacctagaacctcacaattgtgtgtgagtttaatttcagtggattaccactttatttaaga 52171991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 28798461 - 28798389
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | |||| ||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  28798461 gacccgggttcgaacccgggaccttacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 28798389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 53457879 - 53457951
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| ||||||||| || | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  53457879 gacccgggttcgaatccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 53457951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 54768505 - 54768433
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||||| |||||||| ||||||| ||||||  |||||||| |||||||||||||||||||    
T  54768505 gacccgggttcgaacccaggacctcacagttgtgtgcgagttttttttcagtggattaccacttcatctaaga 54768433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 19225319 - 19225386
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||| | |||||||||||||| ||||||||| ||||||||  ||||||||||||||||||    
T  19225319 gggttcgaacccgggacctcacaattgtgcgtgagtttagtttcagtggtttaccacttcatctaaga 19225386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 149
Target Start/End: Original strand, 55214707 - 55214781
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaagata 149  Q
    |||| |||||||||||| | |||||||| |||||| |||||||| |||||||| |||||||||| ||||||||||    
T  55214707 gacccgggttcgaacccgggacctcacagttgtgtatgagtttattttcagtggattaccactttatctaagata 55214781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 19814160 - 19814229
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatcta 144  Q
    ||||||||||| ||||  | ||||||||||| ||||||||||||||||||||  ||||||||||||||||    
T  19814160 gacctgggttcaaacctgggacctcacaattatgtgtgagtttaatttcagttgattaccacttcatcta 19814229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 147
Target Start/End: Original strand, 1966625 - 1966677
Alignment:
Q  95 acctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||| |||||||||||||||||||||||| ||||| |||||||||||||    
T  1966625 acctcacagttgtgtgtgagtttaatttcagtggattacaacttcatctaaga 1966677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 23417556 - 23417484
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | || | ||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  23417556 gacccgggttcgaacccgggactttacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 23417484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 29581116 - 29581045
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||| |||||||||||   |||||||| ||||||||||||||||||| |||| |||||||||||||||||||    
T  29581116 gacctaggttcgaacccgagacctcacagttgtgtgtgagtttaattt-agtggattaccacttcatctaaga 29581045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 18257389 - 18257456
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||| ||| | |||||||| ||||| ||||||||| |||||||| |||||||||||||||||||    
T  18257389 gggttcgagcccgggacctcacagttgtgcgtgagtttattttcagtggattaccacttcatctaaga 18257456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 19849571 - 19849504
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||| | |||||||| ||||||||||||||| ||||| ||  ||||||||||||||||||    
T  19849571 gggttcgaacccgggacctcacagttgtgtgtgagtttattttcaatggtttaccacttcatctaaga 19849504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 23532125 - 23532172
Alignment:
Q  98 tcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaa 145  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||    
T  23532125 tcacagttgtgtgtgagtttaatttcagtgaattaccacttcttctaa 23532172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 147
Target Start/End: Original strand, 51287675 - 51287729
Alignment:
Q  94 aacctcacaattgtgtgtgagttt-aatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||| |||||||||||||| |||||||||||||||||| |||||||||||    
T  51287675 aacctcacagttgtgtgtgagttttaatttcagtgaattaccatttcatctaaga 51287729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 147
Target Start/End: Original strand, 16555381 - 16555434
Alignment:
Q  94 aacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||| |||||||||| |||||||| | ||||||||||||||||||||||    
T  16555381 aacctcacagttgtgtgtgaatttaattttaatgaattaccacttcatctaaga 16555434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 144
Target Start/End: Complemental strand, 23710398 - 23710337
Alignment:
Q  83 ttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatcta 144  Q
    ||||||||  |||||||||| ||  |||||||||||||||||||| ||||||||||||||||    
T  23710398 ttcgaacctggaacctcacagttacgtgtgagtttaatttcagtggattaccacttcatcta 23710337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 139
Target Start/End: Original strand, 39807906 - 39807963
Alignment:
Q  82 gttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttc 139  Q
    |||||||| | | |||||||| |||||||||||||||||||||||| |||||||||||    
T  39807906 gttcgaactcgggacctcacagttgtgtgtgagtttaatttcagtggattaccacttc 39807963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 2075564 - 2075632
Alignment:
Q  79 tgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||||||| | |||||||| || |||||||||||||||||| ||| ||| ||||| ||||||||    
T  2075564 tgggttcgaacccgggacctcacagttatgtgtgagtttaatttcaatgatttatcactttatctaaga 2075632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 22608040 - 22608108
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatct 143  Q
    |||| |||||||||||| | |||||||| |||||| |||||||||||||| || ||||| |||||||||    
T  22608040 gacccgggttcgaacccgggacctcacagttgtgtctgagtttaatttcaatggattactacttcatct 22608108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 33770627 - 33770695
Alignment:
Q  79 tgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||||||| | || ||| | ||||||||||||||||||||||||  ||||| ||||||||||||    
T  33770627 tgggttcgaacccgggacttcatagttgtgtgtgagtttaatttcagtggtttaccgcttcatctaaga 33770695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 88 - 148
Target Start/End: Original strand, 48822881 - 48822941
Alignment:
Q  88 acccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaagat 148  Q
    |||||||| |||||| ||||||||||||||||||||| |  ||||||||||||| ||||||    
T  48822881 acccagaatctcacagttgtgtgtgagtttaatttcaatagattaccacttcatttaagat 48822941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 55400291 - 55400355
Alignment:
Q  83 ttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||| | |||||||| | |||| |||||||||| |||||||| |||||||||||||||||||    
T  55400291 ttcgaactcggaacctcatagttgtatgtgagtttattttcagtggattaccacttcatctaaga 55400355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 37620673 - 37620744
Alignment:
Q  76 acctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||||||| | |  |||||  | ||||||||||||||||||||| |||||||||||||| ||||    
T  37620673 acctgggttcgaacccgggatatcacaggtttgtgtgagtttaatttcagtggattaccacttcatcaaaga 37620744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 148
Target Start/End: Complemental strand, 516518 - 516456
Alignment:
Q  86 gaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaagat 148  Q
    |||||||| | |||||||||||||||||||||| |||| ||| |||||  |||||||||||||    
T  516518 gaacccaggatctcacaattgtgtgtgagtttattttcggtggattacagcttcatctaagat 516456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 1125964 - 1126014
Alignment:
Q  97 ctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||| |||||| |||||||||||||| | ||||||||||||||||||||    
T  1125964 ctcacagttgtgtatgagtttaatttcaataaattaccacttcatctaaga 1126014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 145
Target Start/End: Complemental strand, 2864821 - 2864751
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaa 145  Q
    |||| ||||||||||| ||||||||| | ||||||||||| |||||||||  |  ||||||||||||||||    
T  2864821 gacccgggttcgaacctagaacctcagagttgtgtgtgagcttaatttcaaaggtttaccacttcatctaa 2864751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 12867918 - 12867968
Alignment:
Q  97 ctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||| ||||| ||||||||| |||||||| |||||||||||||||||||    
T  12867918 ctcacagttgtgagtgagtttattttcagtggattaccacttcatctaaga 12867968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 138
Target Start/End: Original strand, 37134108 - 37134166
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccactt 138  Q
    ||||||||||||  ||| ||||| ||||||||||||||||||||||||  |||||||||    
T  37134108 gggttcgaacccgaaacttcacagttgtgtgtgagtttaatttcagtggtttaccactt 37134166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 147
Target Start/End: Complemental strand, 50347372 - 50347330
Alignment:
Q  105 tgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||||||||||||||||| |||||||| ||||||||||    
T  50347372 tgtgtgtgagtttaatttcagtggattaccacctcatctaaga 50347330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 12767145 - 12767214
Alignment:
Q  78 ctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||||| ||  ||||||||| ||||||||||||||||||||| ||  ||||  ||||||||||||    
T  12767145 ctgggttcgaatccgaaacctcacagttgtgtgtgagtttaatttcactggtttactgcttcatctaaga 12767214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 143
Target Start/End: Complemental strand, 24518049 - 24517988
Alignment:
Q  82 gttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatct 143  Q
    ||||||||||  || ||||||||| |||||||||||||||| | ||||||||||||| ||||    
T  24518049 gttcgaacccgaaatctcacaattatgtgtgagtttaattttaatgaattaccacttaatct 24517988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 50033460 - 50033509
Alignment:
Q  98 tcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||| |||||||| |||||||||||| |||||||||||||||| |||||    
T  50033460 tcacagttgtgtgtaagtttaatttcaatgaattaccacttcatataaga 50033509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 135
Target Start/End: Complemental strand, 41001575 - 41001535
Alignment:
Q  95 acctcacaattgtgtgtgagtttaatttcagtgaattacca 135  Q
    ||||||||||| ||||||||||||||||||||| |||||||    
T  41001575 acctcacaattatgtgtgagtttaatttcagtgcattacca 41001535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 52768365 - 52768302
Alignment:
Q  83 ttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||| || | |||||| ||||||||||||||||||||| || ||||||| |||||||||||    
T  52768365 ttcgaaccaaggatctcacagttgtgtgtgagtttaatttcaatggattacca-ttcatctaaga 52768302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 147
Target Start/End: Original strand, 11278067 - 11278105
Alignment:
Q  109 tgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  11278067 tgtgagtttaatttcagtggtttaccacttcatctaaga 11278105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 37395698 - 37395739
Alignment:
Q  94 aacctcacaattgtgtgtgagtttaatttcagtgaattacca 135  Q
    ||||||||| |||||||||||| |||||||||||| ||||||    
T  37395698 aacctcacagttgtgtgtgagtataatttcagtgacttacca 37395739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 50035970 - 50036019
Alignment:
Q  98 tcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||| |||||||| |||||||||||| |||||||| ||||||| |||||    
T  50035970 tcacagttgtgtgtaagtttaatttcattgaattactacttcatataaga 50036019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 149
Target Start/End: Original strand, 2804609 - 2804649
Alignment:
Q  109 tgtgagtttaatttcagtgaattaccacttcatctaagata 149  Q
    |||||||||||||| |||| ||||||||||||| |||||||    
T  2804609 tgtgagtttaatttaagtggattaccacttcatttaagata 2804649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 138
Target Start/End: Original strand, 41679452 - 41679492
Alignment:
Q  98 tcacaattgtgtgtgagtttaatttcagtgaattaccactt 138  Q
    ||||| |||||||||||| |||||||||||| |||||||||    
T  41679452 tcacagttgtgtgtgagtgtaatttcagtgacttaccactt 41679492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 9011 - 8944
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||||| || |||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  9011 gggttcgaacctaggacctcacagttgtgtgtgagtttaatttcagtgatttaccacttcatctaaga 8944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 8e-21; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 75 - 149
Target Start/End: Complemental strand, 43753827 - 43753752
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagttt-aatttcagtgaattaccacttcatctaagata 149  Q
    ||||||||||||||||| |||||||||| |||| ||||||||| |||||||||| |||||||||||||||||||||    
T  43753827 gacctgggttcgaacccggaacctcacagttgtatgtgagttttaatttcagtggattaccacttcatctaagata 43753752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 48444222 - 48444153
Alignment:
Q  78 ctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||||| | || ||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  48444222 ctgggttcgaaccctgtacttcacagttgtgtgtaagtttaatttcagtgaattaccacttcatctaaga 48444153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 4106793 - 4106865
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  4106793 gacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 4106865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 4107364 - 4107436
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  4107364 gacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 4107436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 25112320 - 25112248
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||||||||||| | |||||||| ||||||||| ||||| |||||||| |||||||||||||||||||    
T  25112320 gacctgggttcgaacccgggacctcacagttgtgtgtgggtttattttcagtggattaccacttcatctaaga 25112248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 31770605 - 31770533
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  31770605 gacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 31770533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 47557836 - 47557908
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| |||||||||| |||| |||||||||||||||||||  ||||||||||||||||||    
T  47557836 gacccgggttcgaacccggaacctcacagttgtatgtgagtttaatttcagtggtttaccacttcatctaaga 47557908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 147
Target Start/End: Original strand, 11355850 - 11355950
Alignment:
Q  55 atgccgaaattgcaaggtcggac--------ctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaag 146  Q
    |||||||||||||||||||||||        |||| ||||||||| | | |||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  11355850 atgccgaaattgcaaggtcggacgttatgatctggattcgaacccgggatctcacagttgtgtgtgagtttaatttcagtggattaccacttcatctaag 11355949  T
Q  147 a 147  Q
    |    
T  11355950 a 11355950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 23358245 - 23358312
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  23358245 gggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 23358312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 75 - 145
Target Start/End: Original strand, 44083995 - 44084065
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaa 145  Q
    |||| |||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||    
T  44083995 gacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaa 44084065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 2146691 - 2146763
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||||  |||||||| ||||||||| ||||| |||||||| |||||||||||||||||||    
T  2146691 gacccgggttcgaacccaagacctcacagttgtgtgtgggtttattttcagtggattaccacttcatctaaga 2146763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 8439141 - 8439205
Alignment:
Q  83 ttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||||| |||||||| |||||||||| |||| |||||||| |||||||||||||||||||    
T  8439141 ttcgaacccaggacctcacagttgtgtgtgaatttattttcagtggattaccacttcatctaaga 8439205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 25546348 - 25546276
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| ||||||||| || | |||||||| ||||||||||||||||||||||||  ||||||||||||||||||    
T  25546348 gacccgggttcgaatccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaaga 25546276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 38781273 - 38781209
Alignment:
Q  83 ttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  38781273 ttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 38781209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 40058293 - 40058365
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | |||||||| |||||| |||||||| |||||||| |||||||||||||||||||    
T  40058293 gacccgggttcgaacccgggacctcacagttgtgtatgagtttattttcagtggattaccacttcatctaaga 40058365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 41183870 - 41183942
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||||||||||||  |||||||| || |||||||||||| |||||||| |||| ||||||||||||||    
T  41183870 gacctgggttcgaacccaatacctcacagttatgtgtgagtttattttcagtggattatcacttcatctaaga 41183942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 47570791 - 47570719
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | | |||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  47570791 gacccgggttcgaacccgggatctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 47570719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 5587340 - 5587407
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||||| |||||||| ||  ||||||||||||||| |||| |||||||||||||||||||    
T  5587340 gggttcgaacccaggacctcacatttacgtgtgagtttaattttagtggattaccacttcatctaaga 5587407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 5592301 - 5592368
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||||| |||||||| ||  ||||||||||||||| |||| |||||||||||||||||||    
T  5592301 gggttcgaacccaggacctcacatttacgtgtgagtttaattttagtggattaccacttcatctaaga 5592368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 27229551 - 27229484
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgag-tttaatttcagtgaattaccacttcat 141  Q
    ||||||||||||||||| | |||||||| ||||||||||| ||||||||||||| |||||||||||||    
T  27229551 gacctgggttcgaacccgggacctcacagttgtgtgtgagttttaatttcagtggattaccacttcat 27229484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 29484825 - 29484756
Alignment:
Q  78 ctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||| |||||| | ||||||||||||| ||||||||||||||||||| |||| |||||||| |||||    
T  29484825 ctgggtttgaacccgggacctcacaattgtatgtgagtttaatttcagtggattatcacttcatataaga 29484756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 5772892 - 5772820
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||| |  ||||||||| ||||||||||||||||||||||||  |||||||||||| |||||    
T  5772892 gacccgggttcgaactcgaaacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatttaaga 5772820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 28603066 - 28603138
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||| ||||||||||   || |||||||||| |||||||||||| |||||| |||||||||||||||||||    
T  28603066 gacctgagttcgaacccgagacttcacaattgtatgtgagtttaatctcagtggattaccacttcatctaaga 28603138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 48146808 - 48146880
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | |||||||| ||||||||||||| | ||||| || |||||||||||||||||||    
T  48146808 gacccgggttcgaacccgggacctcacagttgtgtgtgagttaattttcattggattaccacttcatctaaga 48146880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 147
Target Start/End: Complemental strand, 27915631 - 27915581
Alignment:
Q  97 ctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  27915631 ctcacagttgtgtatgagtttaatttcaatgaattaccacttcatctaaga 27915581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 7162861 - 7162791
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||| | | ||||||||||||||||  |||||| |||||||| |||||||||||||||||||    
T  7162861 gacccgggttcgaactcgggacctcacaattgtgtg--agtttattttcagtggattaccacttcatctaaga 7162791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 19630718 - 19630669
Alignment:
Q  98 tcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  19630718 tcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 19630669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 31288294 - 31288225
Alignment:
Q  78 ctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||||| |  ||| |||||| |||||||| |||||||||||||||  ||||||||||||||||||    
T  31288294 ctgggttcgaatctggaatctcacagttgtgtgtaagtttaatttcagtggtttaccacttcatctaaga 31288225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 35309909 - 35309981
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||| |||||| || | | |||||||||||||| ||||||||||||||||  ||| ||||||||||||||    
T  35309909 gacctggtttcgaatccgggatctcacaattgtgtgcgagtttaatttcagtggtttatcacttcatctaaga 35309981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 138
Target Start/End: Original strand, 34763517 - 34763560
Alignment:
Q  95 acctcacaattgtgtgtgagtttaatttcagtgaattaccactt 138  Q
    |||||||| |||||||||||||||||||||||| ||||||||||    
T  34763517 acctcacagttgtgtgtgagtttaatttcagtggattaccactt 34763560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 147
Target Start/End: Complemental strand, 47250295 - 47250252
Alignment:
Q  104 ttgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||||||||| |||||||| |||||||||||||||||||    
T  47250295 ttgtgtgtgagtttattttcagtggattaccacttcatctaaga 47250252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 15634944 - 15634882
Alignment:
Q  83 ttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaa 145  Q
    |||||| || |||| ||||| ||||||||||||||| |||||||  |||||||||||||||||    
T  15634944 ttcgaaaccggaacttcacagttgtgtgtgagtttattttcagtagattaccacttcatctaa 15634882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 147
Target Start/End: Original strand, 25872824 - 25872890
Alignment:
Q  81 ggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||| |  |||| |||||||||| |||||||| |||| |||| ||||||||||||||||||    
T  25872824 ggttcgaacctatgaccttacaattgtgtatgagtttattttctgtgatttaccacttcatctaaga 25872890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 10220542 - 10220474
Alignment:
Q  78 ctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||||| ||  ||||||||| || |||||||||||||||||||||  |||||| |||||||||||    
T  10220542 ctgggttcgaatccgaaacctcacagttttgtgtgagtttaatttcagtggtttacca-ttcatctaaga 10220474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 144
Target Start/End: Original strand, 38033804 - 38033853
Alignment:
Q  95 acctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatcta 144  Q
    |||||||| ||||||||||||||| |||||||| | ||||||||||||||    
T  38033804 acctcacagttgtgtgtgagtttattttcagtggagtaccacttcatcta 38033853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 143
Target Start/End: Complemental strand, 39514049 - 39513988
Alignment:
Q  82 gttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatct 143  Q
    |||||||||| | |||| ||| || ||||||||||||||||| ||| |||||||||||||||    
T  39514049 gttcgaacccgggaccttacagttatgtgtgagtttaatttcggtggattaccacttcatct 39513988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 147
Target Start/End: Complemental strand, 42081660 - 42081620
Alignment:
Q  107 tgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||| ||||||||||||||||||| ||||||||    
T  42081660 tgtgtgagtttattttcagtgaattaccactttatctaaga 42081620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 127
Target Start/End: Original strand, 46427423 - 46427467
Alignment:
Q  83 ttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtg 127  Q
    |||||| || |||||||||| ||||||||||||||||||||||||    
T  46427423 ttcgaatccggaacctcacagttgtgtgtgagtttaatttcagtg 46427467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 23036268 - 23036208
Alignment:
Q  83 ttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaa 145  Q
    ||||||| |||||||||||| || ||||  |||||||||||| || |||||||||||||||||    
T  23036268 ttcgaactcagaacctcacagttatgtg--agtttaatttcaatggattaccacttcatctaa 23036208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 147
Target Start/End: Complemental strand, 32606397 - 32606331
Alignment:
Q  81 ggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||   |||| ||| || | ||||| ||||||||||||||||||||| |||||||||||    
T  32606397 ggttcgaacccgagaccttacagttttatgtgaatttaatttcagtgaattaccaattcatctaaga 32606331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 35577926 - 35577877
Alignment:
Q  98 tcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||||| |||||||||||| || ||||| | |||||||||||    
T  35577926 tcacaattgtgtgtaagtttaatttcaatggattacaatttcatctaaga 35577877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 147
Target Start/End: Complemental strand, 4001885 - 4001845
Alignment:
Q  107 tgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||||||||| ||  ||||||||||||||||||    
T  4001885 tgtgtgagtttaatttcaatggtttaccacttcatctaaga 4001845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 147
Target Start/End: Original strand, 40657616 - 40657656
Alignment:
Q  107 tgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||||||| |||| ||||||||||||||    
T  40657616 tgtgcgagtttaatttcagtggattatcacttcatctaaga 40657656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 43203361 - 43203433
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | |||| ||| ||||||||||||||| || ||||| |||  |||||||| |||||    
T  43203361 gacccgggttcgaacccgggaccttacagttgtgtgtgagtttatttacagtggattttcacttcatataaga 43203433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1348 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold1348
Description:

Target: scaffold1348; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 935 - 863
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  935 gacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 56536 - 56608
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  56536 gacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 56608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 5e-19; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 3822451 - 3822523
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||||| | |||||| ||||||||||||||||||| |||||||||||||||| |||||||    
T  3822451 gacccgggttcgaacccaggatctcacagttgtgtgtgagtttaattttagtgaattaccacttcttctaaga 3822523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 6602591 - 6602519
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  6602591 gacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 6602519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 6678044 - 6677972
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  6678044 gacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 6677972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 32333169 - 32333241
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  32333169 gacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 32333241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 35779570 - 35779498
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  35779570 gacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 35779498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 81 - 147
Target Start/End: Complemental strand, 1407 - 1341
Alignment:
Q  81 ggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  1407 ggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 1341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 81 - 147
Target Start/End: Complemental strand, 1078715 - 1078649
Alignment:
Q  81 ggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  1078715 ggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 1078649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 145
Target Start/End: Original strand, 7813382 - 7813447
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaa 145  Q
    |||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||    
T  7813382 gggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaa 7813447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 70596 - 70524
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| ||||| |||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  70596 gacccgggtttgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 70524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 4531055 - 4530983
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | ||||||||  |||||||||||||||||||||||  ||||||||||||||||||    
T  4531055 gacccgggttcgaacccgggacctcacagctgtgtgtgagtttaatttcagtggtttaccacttcatctaaga 4530983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 141
Target Start/End: Original strand, 5385399 - 5385459
Alignment:
Q  81 ggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcat 141  Q
    ||||||||||| | |||||||| ||||||||||||||||||||||||| ||||||||||||    
T  5385399 ggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtgatttaccacttcat 5385459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 28817311 - 28817383
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | | |||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  28817311 gacccgggttcgaacccgggatctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 28817383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 148
Target Start/End: Complemental strand, 41849332 - 41849232
Alignment:
Q  55 atgccgaaattgcaaggtcggac--------ctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaag 146  Q
    |||||||||||||||||||||||        ||||||||||| || |||||||||  |||||||||||||||||||||||| ||||||| ||||||||||    
T  41849332 atgccgaaattgcaaggtcggacgtcgtgatctgggttcgaatccggaacctcactgttgtgtgtgagtttaatttcagtg-attaccatttcatctaag 41849234  T
Q  147 at 148  Q
    ||    
T  41849233 at 41849232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 42885229 - 42885301
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | | |||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  42885229 gacccgggttcgaacccgggatctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 42885301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 13891150 - 13891217
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||||| || |||||||| ||||||||||||||| ||||||||  ||||||||||||||||||    
T  13891150 gggttcgaacctaggacctcacagttgtgtgtgagtttattttcagtggtttaccacttcatctaaga 13891217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 45264708 - 45264641
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||| | |||||||| || ||||||||||||||||||||| ||||||||||| |||||||    
T  45264708 gggttcgaacccgggacctcacagttttgtgtgagtttaatttcagtggattaccacttcctctaaga 45264641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 101 - 147
Target Start/End: Original strand, 29425432 - 29425478
Alignment:
Q  101 caattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  29425432 caattgtgtgtgagtttaatttcagtggattaccacttcatctaaga 29425478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 145
Target Start/End: Complemental strand, 31532178 - 31532128
Alignment:
Q  95 acctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaa 145  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  31532178 acctcacagttgtgtgtgagtttaatttcagtggattaccacttcatctaa 31532128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 9775112 - 9775043
Alignment:
Q  78 ctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||||| |||||||||| || |||||||||||||||| | || ||||| |||||||||||||    
T  9775112 ctgggttcgaacccggaacctcacagttatgtgtgagtttaatttgaatggattacaacttcatctaaga 9775043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 95 - 148
Target Start/End: Original strand, 40911295 - 40911348
Alignment:
Q  95 acctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaagat 148  Q
    ||||||||| |||||||||||||||||||||||  |||||||||||||||||||    
T  40911295 acctcacaactgtgtgtgagtttaatttcagtggcttaccacttcatctaagat 40911348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 42192705 - 42192640
Alignment:
Q  82 gttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||| | | |||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  42192705 gttcgaacccgggatctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 42192640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 147
Target Start/End: Complemental strand, 31695322 - 31695270
Alignment:
Q  95 acctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||||||||||||||||||||| ||  ||||||||||||||||||    
T  31695322 acctcacaattgtgtgtgagtttaatttcaatggtttaccacttcatctaaga 31695270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 7792721 - 7792788
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||| | | |||||| ||||||||||||||| |||||||| ||||| |||||||||||||    
T  7792721 gggttcgaacccgggatctcacagttgtgtgtgagtttattttcagtggattactacttcatctaaga 7792788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 9292096 - 9292145
Alignment:
Q  98 tcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  9292096 tcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 9292145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 147
Target Start/End: Original strand, 39303384 - 39303437
Alignment:
Q  95 acctcacaattgtgtgtgagttt-aatttcagtgaattaccacttcatctaaga 147  Q
    |||||||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  39303384 acctcacagttgtgtgtgagttttaatttcagtggattaccacttcatctaaga 39303437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 39435340 - 39435409
Alignment:
Q  78 ctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||||||||   |||||||| |||||||||||||||||||  ||| ||||| |||||||||||||    
T  39435340 ctgggttcgaacccgagacctcacagttgtgtgtgagtttaatttatgtggattacgacttcatctaaga 39435409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 18752401 - 18752468
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||| |||||| ||| ||||||||| |||||||||||||| |||  |||||||| |||||    
T  18752401 gggttcgaacccggaaccttacagttgtgtgtgggtttaatttcagtggattgacacttcatntaaga 18752468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 147
Target Start/End: Complemental strand, 10963307 - 10963243
Alignment:
Q  81 ggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||||| | |||||||| |||||||  |||||| |||||||| |||||||||||||||||||    
T  10963307 ggttcgaacccgggacctcacagttgtgtg--agtttattttcagtggattaccacttcatctaaga 10963243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 31969788 - 31969721
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||| | | |||||| | |||||||||| |||||||||||||  ||||||||||||||||||    
T  31969788 gggttcgaacacgggacctcaaagttgtgtgtgaatttaatttcagtggtttaccacttcatctaaga 31969721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 6099634 - 6099699
Alignment:
Q  82 gttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||||  ||||||||||||| | ||||||||| ||| ||||  ||||||||||||||||||    
T  6099634 gttcgaacccgaaacctcacaattgcgcgtgagtttagttttagtggtttaccacttcatctaaga 6099699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 14400781 - 14400842
Alignment:
Q  86 gaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||| | |||||||||||||| ||||||||||||  ||||  ||||||||||||||||||    
T  14400781 gaacccgggacctcacaattgtgagtgagtttaattcaagtggtttaccacttcatctaaga 14400842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 7403744 - 7403694
Alignment:
Q  98 tcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaagata 149  Q
    ||||| |||| |||||| ||||||||||||| ||||||||||||||||||||    
T  7403744 tcacagttgtttgtgagcttaatttcagtga-ttaccacttcatctaagata 7403694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 20269607 - 20269657
Alignment:
Q  97 ctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||| ||||||||||||||| ||||| || ||||||| |||||||||||    
T  20269607 ctcacagttgtgtgtgagtttattttcaatggattaccatttcatctaaga 20269657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 21056236 - 21056286
Alignment:
Q  97 ctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||| ||||||||||||||| ||||| || ||||||| |||||||||||    
T  21056236 ctcacagttgtgtgtgagtttattttcaatggattaccatttcatctaaga 21056286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 42364752 - 42364703
Alignment:
Q  98 tcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||| |||||||||||||||||||||||   ||||||||| ||||||||    
T  42364752 tcacagttgtgtgtgagtttaatttcagtagtttaccactttatctaaga 42364703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 44124104 - 44124153
Alignment:
Q  98 tcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||| |||||||| |||||||||||| |||||||| ||||||| |||||    
T  44124104 tcacagttgtgtgtaagtttaatttcattgaattactacttcatataaga 44124153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 12534786 - 12534721
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||||| | |||||| ||| |||  |||||| |||||||  |||||||||||||||||||    
T  12534786 gggttcgaacccaggatctcacagttgcgtg--agtttattttcagtagattaccacttcatctaaga 12534721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 147
Target Start/End: Complemental strand, 33731517 - 33731465
Alignment:
Q  95 acctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||| || ||||||||||||||||||| ||||  |||||||||| |||||||    
T  33731517 acctcccagttgtgtgtgagtttaattttagtggtttaccacttcttctaaga 33731465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 40932786 - 40932834
Alignment:
Q  97 ctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaa 145  Q
    |||||| |||||||||| |||||||| |||  |||||||||||||||||    
T  40932786 ctcacagttgtgtgtgactttaattttagtagattaccacttcatctaa 40932834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 5e-19; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 21000747 - 21000815
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatct 143  Q
    ||||||||||||||||| | |||||||||||||||||| ||||||||||||||  ||||||||||||||    
T  21000747 gacctgggttcgaacccgggacctcacaattgtgtgtgggtttaatttcagtggtttaccacttcatct 21000815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 33621549 - 33621621
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | |||||||| ||||||||||||||||||||||||  ||||||||||||||||||    
T  33621549 gacccgggttcgaacccgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaaga 33621621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 28322992 - 28323059
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||| | |||||||||||||||||||||||| ||||||||  ||||||||||||||||||    
T  28322992 gggttcgaacccgggacctcacaattgtgtgtgagtttagtttcagtggtttaccacttcatctaaga 28323059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 19145536 - 19145597
Alignment:
Q  86 gaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||| | ||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  19145536 gaacccgggacctcacaattgtgtgtgaatttaatttcagtggattaccacttcatctaaga 19145597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 147
Target Start/End: Original strand, 21037365 - 21037417
Alignment:
Q  95 acctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  21037365 acctcacagttgtgtgtgagtttattttcagtgaattaccacttcatctaaga 21037417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 33704271 - 33704343
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||||||| | |||||||| ||||||||||||||| |||||||| ||||||||||||| |||||    
T  33704271 gacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatttaaga 33704343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 361071 - 361138
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||| |||||||||| || | ||||||||||||||||||| |||| ||||||||||||||    
T  361071 gggttcgaacccggaacctcacagttatatgtgagtttaatttcagtggattaacacttcatctaaga 361138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 4464187 - 4464254
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||  | |||||||| ||||||||||||||||||||||||  ||||||||||||||||||    
T  4464187 gggttcgaacctgggacctcacagttgtgtgtgagtttaatttcagtggtttaccacttcatctaaga 4464254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 147
Target Start/End: Complemental strand, 24619132 - 24619080
Alignment:
Q  95 acctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||| |||||||||||||||||||||||||  |||||||||||||||||||    
T  24619132 acctcataattgtgtgtgagtttaatttcagtcgattaccacttcatctaaga 24619080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 147
Target Start/End: Complemental strand, 29009703 - 29009651
Alignment:
Q  95 acctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||| ||||||||||||||| ||| ||||||||||||||||||||||||    
T  29009703 acctcacagttgtgtgtgagtttatttttagtgaattaccacttcatctaaga 29009651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 147
Target Start/End: Complemental strand, 35218693 - 35218641
Alignment:
Q  95 acctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  35218693 acctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 35218641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 7014375 - 7014313
Alignment:
Q  83 ttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaa 145  Q
    |||||||||  ||||||| |||| | ||||||||||||||||||| |||||||||||||||||    
T  7014375 ttcgaacccgaaacctcataattttatgtgagtttaatttcagtgtattaccacttcatctaa 7014313  T

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Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 16518478 - 16518548
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||||||||||||| | |||||| |||||  |||||||| |||||||| ||||||| |||||||||||    
T  16518478 gacctgggttcgaacccaggagctcacagttgtg--tgagtttattttcagtggattaccatttcatctaaga 16518548  T

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Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 22576244 - 22576308
Alignment:
Q  83 ttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||||||| |||||||||| || ||||||||||| |||||| || ||||||||||| |||||||    
T  22576244 ttcgaacccggaacctcacagttatgtgtgagtttgatttcattgtattaccacttcttctaaga 22576308  T

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Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 143
Target Start/End: Original strand, 2959210 - 2959272
Alignment:
Q  81 ggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatct 143  Q
    |||||||||||   |||||||| |||||||||||||||||||| ||| | |||||||||||||    
T  2959210 ggttcgaacccgagacctcacagttgtgtgtgagtttaatttccgtggaataccacttcatct 2959272  T

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Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 147
Target Start/End: Original strand, 32289420 - 32289472
Alignment:
Q  95 acctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||| |||||||| |||||| | ||||||||||||||||||||| ||||    
T  32289420 acctcacagttgtgtgtaagtttattatcagtgaattaccacttcatcaaaga 32289472  T

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Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 140
Target Start/End: Complemental strand, 10999459 - 10999416
Alignment:
Q  97 ctcacaattgtgtgtgagtttaatttcagtgaattaccacttca 140  Q
    |||||| |||| ||||||||||||||||||| ||||||||||||    
T  10999459 ctcacagttgtatgtgagtttaatttcagtggattaccacttca 10999416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 147
Target Start/End: Complemental strand, 7487331 - 7487269
Alignment:
Q  81 ggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    ||||| ||||||||||||||||||    |||||||||||||||||||  ||||||||| ||| ||||    
T  7487331 ggttcaaacccagaacctcacaat----tgtgagtttaatttcagtggcttaccactttatccaaga 7487269  T

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Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 147
Target Start/End: Original strand, 11456048 - 11456100
Alignment:
Q  95 acctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||| ||||||||||||||||| ||  |||  |||||||||||||||||||    
T  11456048 acctcataattgtgtgtgagtttatttctagtcgattaccacttcatctaaga 11456100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 147
Target Start/End: Complemental strand, 28592181 - 28592129
Alignment:
Q  95 acctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||| ||||||||||||||| ||||| || ||||||| || ||||||||    
T  28592181 acctcacagttgtgtgtgagtttattttcaatggattaccaatttatctaaga 28592129  T

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Target: scaffold0119 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 14019 - 13952
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  14019 gggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 13952  T

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Target: scaffold0119; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 19699 - 19632
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||| | |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  19699 gggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 19632  T

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Target: scaffold0038 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 114312 - 114379
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||| | |||||||||||||||||||||||| ||||||||  ||||||||||||||||||    
T  114312 gggttcgaacccgggacctcacaattgtgtgtgagtttagtttcagtggtttaccacttcatctaaga 114379  T

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Target: scaffold0053 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 22218 - 22290
Alignment:
Q  75 gacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||| |||||||| ||| | |||||||| ||| |||||||||||||||||||| |||||||||||||||||||    
T  22218 gacccgggttcgagcccgggacctcacagttgcgtgtgagtttaatttcagtggattaccacttcatctaaga 22290  T

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Target: scaffold0044 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 10041 - 9974
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||||| | |||||| | ||||||||||||||| |||||||| |||||||||||||||||||    
T  10041 gggttcgaacccgggacctcatagttgtgtgtgagtttattttcagtggattaccacttcatctaaga 9974  T

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Target: scaffold0360 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 14727 - 14784
Alignment:
Q  80 gggttcgaacccagaacctcacaattgtgtg--tgagtttaatttcagtgaattacca 135  Q
    |||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||    
T  14727 gggttcgaacccggaacctcacaattgtgtgtctgagtttaatttcagtgaattacca 14784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 148
Target Start/End: Original strand, 14590 - 14633
Alignment:
Q  105 tgtgtgtgagtttaatttcagtgaattaccacttcatctaagat 148  Q
    ||||||||||||||||||||||| |||||||||| |||||||||    
T  14590 tgtgtgtgagtttaatttcagtggattaccacttaatctaagat 14633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 34877 - 34946
Alignment:
Q  79 tgggttcgaacccagaacctcacaattgtgtgtgagttt-aatttcagtgaattaccacttcatctaaga 147  Q
    |||||||||| |||| ||||| || |||| ||||||||| |||||||||| |||||||||||||||||||    
T  34877 tgggttcgaatccaggacctcgcagttgtatgtgagttttaatttcagtggattaccacttcatctaaga 34946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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