View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18974_high_64 (Length: 341)
Name: NF18974_high_64
Description: NF18974
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18974_high_64 |
 | |
|
| [»] scaffold0182 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 309; Significance: 1e-174; HSPs: 20)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 1 - 325
Target Start/End: Complemental strand, 21787123 - 21786799
Alignment:
| Q |
1 |
atccatgtattgcatctattacggtaatgatcatgtattttggctctaacttcaaaatatgtttctgagttaggtaccaagtcagtacttatgatattga |
100 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21787123 |
atccatgtattgcatctattacaataatgatcatgtattttggctctaacttcaaaatatgtttctgagttaggtaccaagtcagtacttatgatattga |
21787024 |
T |
|
| Q |
101 |
aaagttcagcaacttcctcatcactcccaagggaattgagcaaaatcccttttgatcttagtaacttgacatcttcaggattgtcgataagcgagtccat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21787023 |
aaagttcagcaacttcctcatcactcccaagggaattgagcaaaatcccttttgatcttagtaacttgacatcttcaggattgtcgataagcgagtccat |
21786924 |
T |
|
| Q |
201 |
gaaagctgcaaaagaacaaatcccgtagtcgttgtcaaaatctggacacatctcatatgctatcaggttaaggaaagtagcggctgatgtgtcgtccaca |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |
|
|
| T |
21786923 |
gaaagctgcaaaagaacaaatcccgtagtcgttgtcaaaatctggacacatctcatatgctatcaggttgaggaaagtagcggctgaagtgtcgtccaca |
21786824 |
T |
|
| Q |
301 |
acgatctcaggaagagtcagttctg |
325 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
21786823 |
acgatctcaggaagagtcagttctg |
21786799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 325
Target Start/End: Complemental strand, 21773595 - 21773271
Alignment:
| Q |
1 |
atccatgtattgcatctattacggtaatgatcatgtattttggctctaacttcaaaatatgtttctgagttaggtaccaagtcagtacttatgatattga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||| ||||||||||||||||||||||||||||||| |
|
|
| T |
21773595 |
atccatgtattgcatctattacggtaatgatcatgtattttggctctaacctctaaatatgtgtctgcattaggtaccaagtcagtacttatgatattga |
21773496 |
T |
|
| Q |
101 |
aaagttcagcaacttcctcatcactcccaagggaattgagcaaaatcccttttgatcttagtaacttgacatcttcaggattgtcgataagcgagtccat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
21773495 |
aaagttcagcaacttcctcatcactcccaagggaattgagcaaaatctcttttgatctcagtaacttcacatcttcaggattgtcgataagcgagtccat |
21773396 |
T |
|
| Q |
201 |
gaaagctgcaaaagaacaaatcccgtagtcgttgtcaaaatctggacacatctcatatgctatcaggttaaggaaagtagcggctgatgtgtcgtccaca |
300 |
Q |
| |
|
||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||| |||| |||||||| |||||||||| |
|
|
| T |
21773395 |
gaacgctgcaaaagaacaaatcccgtagtcgttatgaaaatctggacacatctcatatgctatcaggttgaggaatgtagtggctgatgagtcgtccaca |
21773296 |
T |
|
| Q |
301 |
acgatctcaggaagagtcagttctg |
325 |
Q |
| |
|
|| |||||||||||||||||||||| |
|
|
| T |
21773295 |
acaatctcaggaagagtcagttctg |
21773271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 24 - 325
Target Start/End: Complemental strand, 21683361 - 21683060
Alignment:
| Q |
24 |
gtaatgatcatgtattttggctctaacttcaaaatatgtttctgagttaggtaccaagtcagtacttatgatattgaaaagttcagcaacttcctcatca |
123 |
Q |
| |
|
|||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |
|
|
| T |
21683361 |
gtaatgatcaatcattttggctttaacttcaaaatatgtttctgggttaggtaccaagtcagtacctatgatattgaaaagttcggcaacttcctcatca |
21683262 |
T |
|
| Q |
124 |
ctcccaagggaattgagcaaaatcccttttgatcttagtaacttgacatcttcaggattgtcgataagcgagtccatgaaagctgcaaaagaacaaatcc |
223 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| |||| ||| ||||||||||||| |||||| ||||||||||| |||||| ||||||||||||| | |
|
|
| T |
21683261 |
ctcccaagggaattgagcaaaattccttttgatctcagtaccttcacatcttcaggatggtcgatgagcgagtccataaaagctacaaaagaacaaattc |
21683162 |
T |
|
| Q |
224 |
cgtagtcgttgtcaaaatctggacacatctcatatgctatcaggttaaggaaagtagcggctgatgtgtcgtccacaacgatctcaggaagagtcagttc |
323 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
21683161 |
cgtagtcgttgtcaaaatttggacacatctcatatgctatcaggttgaggaaagtagtggctgatgtgtcgtccacaacgatctcaggaagagttagttc |
21683062 |
T |
|
| Q |
324 |
tg |
325 |
Q |
| |
|
|| |
|
|
| T |
21683061 |
tg |
21683060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 24 - 323
Target Start/End: Complemental strand, 21717434 - 21717135
Alignment:
| Q |
24 |
gtaatgatcatgtattttggctctaacttcaaaatatgtttctgagttaggtaccaagtcagtacttatgatattgaaaagttcagcaacttcctcatca |
123 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||| ||||||||||||||| |
|
|
| T |
21717434 |
gtaatgatcattcattttggctttaacttcaaaatatgtttctgagttcggtaccaagtcagaacctatgatattgaaaagttcggcaacttcctcatca |
21717335 |
T |
|
| Q |
124 |
ctcccaagggaattgagcaaaatcccttttgatcttagtaacttgacatcttcaggattgtcgataagcgagtccatgaaagctgcaaaagaacaaatcc |
223 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||| || |||||||||| ||| ||||||||||||||||||| || |
|
|
| T |
21717334 |
ctcccaagggaattgagcaaaatcccttttgatctcagtaccttcacatcttcaggatggttgataagcgagcacataaaagctgcaaaagaacaaaacc |
21717235 |
T |
|
| Q |
224 |
cgtagtcgttgtcaaaatctggacacatctcatatgctatcaggttaaggaaagtagcggctgatgtgtcgtccacaacgatctcaggaagagtcagttc |
323 |
Q |
| |
|
| |||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
21717234 |
catagtcgttgttaaaatctggacacatctcatatgcaatcaggttgaggaaagtagcggctgaagtgtcgtccacaacgatctcaggaagagtcagttc |
21717135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 24 - 325
Target Start/End: Complemental strand, 21728134 - 21727833
Alignment:
| Q |
24 |
gtaatgatcatgtattttggctctaacttcaaaatatgtttctgagttaggtaccaagtcagtacttatgatattgaaaagttcagcaacttcctcatca |
123 |
Q |
| |
|
|||||||||| | |||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||| |
|
|
| T |
21728134 |
gtaatgatcaagcattttgtctttaacttcaaaatatgtttctgtgttaggtaccaagtcagtacttatgatattgaaaagttcaaccacttcctcatca |
21728035 |
T |
|
| Q |
124 |
ctcccaagggaattgagcaaaatcccttttgatcttagtaacttgacatcttcaggattgtcgataagcgagtccatgaaagctgcaaaagaacaaatcc |
223 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| | | ||| ||||||||||||| ||||||||| |||||||| |||| | ||||||||||||| | |
|
|
| T |
21728034 |
ctcccaagggaattgagcgaaatcccttttgatctcatttccttcacatcttcaggatggtcgataagtgagtccataaaagatacaaaagaacaaattc |
21727935 |
T |
|
| Q |
224 |
cgtagtcgttgtcaaaatctggacacatctcatatgctatcaggttaaggaaagtagcggctgatgtgtcgtccacaacgatctcaggaagagtcagttc |
323 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||| |||||||| ||||| |
|
|
| T |
21727934 |
cgtaatcgttgtcaaaatctggacacatctcatatgctatcaggttgaggaaagtagcggctgatatgttgtccacaacgatctcgggaagagttagttc |
21727835 |
T |
|
| Q |
324 |
tg |
325 |
Q |
| |
|
|| |
|
|
| T |
21727834 |
tg |
21727833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 21789881 - 21789560
Alignment:
| Q |
1 |
atccatgtattgcatctattacggtaatgatcatgtattttggctctaacttcaaaatatgtttctgagttaggtaccaagtcagtacttatgatattga |
100 |
Q |
| |
|
||||| || |||||| |||||| |||||| ||||||||||| |||| |||||||||||| ||| || ||||||||||||||||||||||||||||||| |
|
|
| T |
21789881 |
atccaagtcttgcatttattacagtaatgctcatgtattttttctctgacttcaaaatatatttttgtattaggtaccaagtcagtacttatgatattga |
21789782 |
T |
|
| Q |
101 |
aaagttcagcaacttcctcatcactcccaagggaattgagcaaaatcccttttgatcttagtaacttgacatcttcaggattgtcgataagcgagtccat |
200 |
Q |
| |
|
||| || |||||||||||||||||||||||||||||||||||||||||||||||||| | | ||| |||||||||||| ||| || || |||||||| |
|
|
| T |
21789781 |
aaaaatcggcaacttcctcatcactcccaagggaattgagcaaaatcccttttgatctcaattccttcacatcttcaggacggtcaatgagtgagtccat |
21789682 |
T |
|
| Q |
201 |
gaaagctgcaaaagaacaaatcccgtagtcgttgtcaaaatctggacacatctcatatgctatcaggttaaggaaagtagcggctgatgtgtcgtccaca |
300 |
Q |
| |
|
|||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||| |
|
|
| T |
21789681 |
gaaagctgcaaacgaacaaattccgtagtcgttctcaaaatctggacacatctcatatgctatcaggttgaggaaagttgcggctgaagtgtcgtccaca |
21789582 |
T |
|
| Q |
301 |
acgatctcaggaagagtcagtt |
322 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
21789581 |
acgatctcaggaagagtcagtt |
21789560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 1 - 319
Target Start/End: Complemental strand, 21994955 - 21994637
Alignment:
| Q |
1 |
atccatgtattgcatctattacggtaatgatcatgtattttggctctaacttcaaaatatgtttctgagttaggtaccaagtcagtacttatgatattga |
100 |
Q |
| |
|
|||||||| || |||||||||| |||||| |||| ||||||||||||||||| ||||||| |||||| || ||||| |||| ||||| |||| |||||| |
|
|
| T |
21994955 |
atccatgtcttccatctattacagtaatgttcatctattttggctctaactttaaaatatatttctgtgtcaggtataaagttagtacgtatgctattga |
21994856 |
T |
|
| Q |
101 |
aaagttcagcaacttcctcatcactcccaagggaattgagcaaaatcccttttgatcttagtaacttgacatcttcaggattgtcgataagcgagtccat |
200 |
Q |
| |
|
|||| | ||||||||||||||||||| | | |||||||||||||||||||||||||| | |||||| ||||||||||||| |||||| || |||||||| |
|
|
| T |
21994855 |
aaagattggcaacttcctcatcactccaaggtgaattgagcaaaatcccttttgatctcaataacttcacatcttcaggatggtcgatgagtgagtccat |
21994756 |
T |
|
| Q |
201 |
gaaagctgcaaaagaacaaatcccgtagtcgttgtcaaaatctggacacatctcatatgctatcaggttaaggaaagtagcggctgatgtgtcgtccaca |
300 |
Q |
| |
|
||||| ||||||||||||||| || |||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||| | ||||||||| |
|
|
| T |
21994755 |
gaaagttgcaaaagaacaaattccatagtcgttctcaaaatctggacacatctcgtatgctatcaggttaaggatagtagcggctgatctatcgtccaca |
21994656 |
T |
|
| Q |
301 |
acgatctcaggaagagtca |
319 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
21994655 |
acgatctcaggaagagtca |
21994637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 1 - 317
Target Start/End: Complemental strand, 21648266 - 21647950
Alignment:
| Q |
1 |
atccatgtattgcatctattacggtaatgatcatgtattttggctctaacttcaaaatatgtttctgagttaggtaccaagtcagtacttatgatattga |
100 |
Q |
| |
|
||||| || |||||| ||||||||||||||| || |||||||||||||||| ||||||||||||| ||||||| |||||| |||| |||||| |||| |
|
|
| T |
21648266 |
atccaagtcttgcatttattacggtaatgataatctattttggctctaactctgaaatatgtttctgtattaggtatcaagtcggtacctatgattttga |
21648167 |
T |
|
| Q |
101 |
aaagttcagcaacttcctcatcactcccaagggaattgagcaaaatcccttttgatcttagtaacttgacatcttcaggattgtcgataagcgagtccat |
200 |
Q |
| |
|
|||| || |||| ||||||||| |||||||||||||||||||||||| |||||||||| | || ||| ||| ||||||||| |||||| || |||||||| |
|
|
| T |
21648166 |
aaagatcggcaatttcctcatcgctcccaagggaattgagcaaaatctcttttgatctcaatagcttcacaacttcaggatggtcgatgagtgagtccat |
21648067 |
T |
|
| Q |
201 |
gaaagctgcaaaagaacaaatcccgtagtcgttgtcaaaatctggacacatctcatatgctatcaggttaaggaaagtagcggctgatgtgtcgtccaca |
300 |
Q |
| |
|
||||||||||||||||||||| | ||||| ||| | ||||||||||||||||||||||||||||||||| || |||||| ||||||| |||||||||| |
|
|
| T |
21648066 |
gaaagctgcaaaagaacaaattctgtagttgttcttaaaatctggacacatctcatatgctatcaggttgagataagtagtagctgatgagtcgtccaca |
21647967 |
T |
|
| Q |
301 |
acgatctcaggaagagt |
317 |
Q |
| |
|
||||||||||| ||||| |
|
|
| T |
21647966 |
acgatctcaggtagagt |
21647950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 24 - 315
Target Start/End: Complemental strand, 21653570 - 21653279
Alignment:
| Q |
24 |
gtaatgatcatgtattttggctctaacttcaaaatatgtttctgagttaggtaccaagtcagtacttatgatattgaaaagttcagcaacttcctcatca |
123 |
Q |
| |
|
|||||| |||| ||||||| |||||||||| ||||| ||||| |||||| |||| ||||||||||||||| ||||||| | | | |||||||||| |
|
|
| T |
21653570 |
gtaatgctcatttattttgcgtctaacttcataatatatttctctgttaggaaccacgtcagtacttatgattttgaaaaaattgacgagttcctcatca |
21653471 |
T |
|
| Q |
124 |
ctcccaagggaattgagcaaaatcccttttgatcttagtaacttgacatcttcaggattgtcgataagcgagtccatgaaagctgcaaaagaacaaatcc |
223 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| || ||||| ||||| ||||||||||||||||||||||| | |
|
|
| T |
21653470 |
ctcccaagggaattgagcaaaatcccttttgatcttagtaccttcacatcttcaggatcttcaataagtgagtcaatgaaagctgcaaaagaacaaattc |
21653371 |
T |
|
| Q |
224 |
cgtagtcgttgtcaaaatctggacacatctcatatgctatcaggttaaggaaagtagcggctgatgtgtcgtccacaacgatctcaggaaga |
315 |
Q |
| |
|
| |||||||| |||||||| |||||||||||||||||||||| ||| |||||||||| |||||| ||||||||||||||||||||||||||| |
|
|
| T |
21653370 |
catagtcgttctcaaaatcaggacacatctcatatgctatcaagttgaggaaagtagtggctgaagtgtcgtccacaacgatctcaggaaga |
21653279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 24 - 311
Target Start/End: Complemental strand, 21711413 - 21711126
Alignment:
| Q |
24 |
gtaatgatcatgtattttggctctaacttcaaaatatgtttctgagttaggtaccaagtcagtacttatgatattgaaaagttcagcaacttcctcatca |
123 |
Q |
| |
|
|||||| |||| |||||||||||| |||||||| |||||||| | ||||||| ||||||||||| |||||| |||||||| || |||| |||||||||| |
|
|
| T |
21711413 |
gtaatgttcatctattttggctcttacttcaaagtatgtttcagtattaggtatcaagtcagtacctatgattttgaaaagatcggcaatttcctcatca |
21711314 |
T |
|
| Q |
124 |
ctcccaagggaattgagcaaaatcccttttgatcttagtaacttgacatcttcaggattgtcgataagcgagtccatgaaagctgcaaaagaacaaatcc |
223 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | || ||| || |||||||||| || || || |||||||||||||||||||||||||||| | |
|
|
| T |
21711313 |
ctcccaagggaattgagcaaaatcccttttgatctcaatagcttcacttcttcaggatgctcaatgagtgagtccatgaaagctgcaaaagaacaaaatc |
21711214 |
T |
|
| Q |
224 |
cgtagtcgttgtcaaaatctggacacatctcatatgctatcaggttaaggaaagtagcggctgatgtgtcgtccacaacgatctcagg |
311 |
Q |
| |
|
| |||||||| | ||||||||||||||||||||| ||||| | ||| ||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
21711213 |
catagtcgttcttaaaatctggacacatctcatacgctattaagttgaggaaagtagcagctgatgtgtcgtccacaacgatctcagg |
21711126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 89 - 322
Target Start/End: Complemental strand, 21666939 - 21666706
Alignment:
| Q |
89 |
ttatgatattgaaaagttcagcaacttcctcatcactcccaagggaattgagcaaaatcccttttgatcttagtaacttgacatcttcaggattgtcgat |
188 |
Q |
| |
|
||||||||||||||| | |||||||||||||||||||||| | ||||||||||||||||||||||||| | | | | ||||||||||||| |||||| |
|
|
| T |
21666939 |
ttatgatattgaaaatattggcaacttcctcatcactcccaaagcaattgagcaaaatcccttttgatctcaattccctcacatcttcaggatggtcgat |
21666840 |
T |
|
| Q |
189 |
aagcgagtccatgaaagctgcaaaagaacaaatcccgtagtcgttgtcaaaatctggacacatctcatatgctatcaggttaaggaaagtagcggctgat |
288 |
Q |
| |
|
||| || || |||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||| || |||||| ||| ||||||| |
|
|
| T |
21666839 |
aagtgactcgatgaaagctgcaaaagaacaaatcccgtagtcattcttaaaatctggacacatctcatatgctatcttattgaggaaaatagtggctgat |
21666740 |
T |
|
| Q |
289 |
gtgtcgtccacaacgatctcaggaagagtcagtt |
322 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
21666739 |
gtgtcgtccacaacgatctcaggaagagtcagtt |
21666706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 25 - 322
Target Start/End: Complemental strand, 15715318 - 15715021
Alignment:
| Q |
25 |
taatgatcatgtattttggctctaacttcaaaatatgtttctgagttaggtaccaagtcagtacttatgatattgaaaagttcagcaacttcctcatcac |
124 |
Q |
| |
|
||||| |||||||| ||| |||||||||| || |||||| | || | |||||| || ||||||||||||||||||||| | ||||||||||||||| |
|
|
| T |
15715318 |
taatgctcatgtatcttgcgtctaacttcataaaatgtttttccgtaatgtaccacgttagtacttatgatattgaaaagattgacaacttcctcatcac |
15715219 |
T |
|
| Q |
125 |
tcccaagggaattgagcaaaatcccttttgatcttagtaacttgacatcttcaggattgtcgataagcgagtccatgaaagctgcaaaagaacaaatccc |
224 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| | | ||| |||||||||||| |||||| |||||| ||| |||||||| ||||||||| ||| | |
|
|
| T |
15715218 |
tcccaagtaaattgagcaaaatcccttttgatctcaattccttcacatcttcaggacggtcgatgagcgaggccaagaaagctgaaaaagaacagatctc |
15715119 |
T |
|
| Q |
225 |
gtagtcgttgtcaaaatctggacacatctcatatgctatcaggttaaggaaagtagcggctgatgtgtcgtccacaacgatctcaggaagagtcagtt |
322 |
Q |
| |
|
||||||||| |||||||||||||| ||||||||||||||| |||| |||||||||||||||| |||| ||||||| |||| |||||||||||||| |
|
|
| T |
15715118 |
gtagtcgttatcaaaatctggacaaatctcatatgctatctggttgaggaaagtagcggctgtagtgttgtccacacggatccgaggaagagtcagtt |
15715021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 325
Target Start/End: Complemental strand, 21658171 - 21657847
Alignment:
| Q |
1 |
atccatgtattgcatctattacggtaatgatcatgtattttggctctaacttcaaaatatgtttctgagttaggtaccaagtcagtacttatgatattga |
100 |
Q |
| |
|
||||| |||||| || |||||| |||||||||||||||||| |||||||||||| ||| |||| | || || |||||||||||||| ||||||||||| |
|
|
| T |
21658171 |
atccaagtattgtatttattacagtaatgatcatgtattttcaatctaacttcaaagtatatttccgggtcagctaccaagtcagtacatatgatattga |
21658072 |
T |
|
| Q |
101 |
aaagttcagcaacttcctcatcactcccaagggaattgagcaaaatcccttttgatcttagtaacttgacatcttcaggattgtcgataagcgagtccat |
200 |
Q |
| |
|
|||| | ||||| ||||||||||| |||||| | ||| |||||||||||||||||| | | ||| || |||||||||| |||||| ||||||||||| |
|
|
| T |
21658071 |
aaagattggcaacatcctcatcactgccaaggcatttggccaaaatcccttttgatctcaattccttcacgtcttcaggatggtcgatgagcgagtccat |
21657972 |
T |
|
| Q |
201 |
gaaagctgcaaaagaacaaatcccgtagtcgttgtcaaaatctggacacatctcatatgctatcaggttaaggaaagtagcggctgatgtgtcgtccaca |
300 |
Q |
| |
|
||||| | ||||||||||||| || || ||||| ||||||||||||||||||||||||||||||||||| |||| ||| |||||| ||| | |||| |
|
|
| T |
21657971 |
gaaagttacaaaagaacaaattccataatcgttctcaaaatctggacacatctcatatgctatcaggttgcggaacgtatgggctgaactgttggacaca |
21657872 |
T |
|
| Q |
301 |
acgatctcaggaagagtcagttctg |
325 |
Q |
| |
|
| |||| ||||||||||||||||| |
|
|
| T |
21657871 |
atgatcataggaagagtcagttctg |
21657847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 78 - 321
Target Start/End: Complemental strand, 21698075 - 21697832
Alignment:
| Q |
78 |
caagtcagtacttatgatattgaaaagttcagcaacttcctcatcactcccaagggaattgagcaaaatcccttttgatcttagtaacttgacatcttca |
177 |
Q |
| |
|
||||||||| | ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||| | | ||| ||||||||| |
|
|
| T |
21698075 |
caagtcagtgcctatgatattgaaaagtttggcaacttcctcatcactcccaaggcaattgagcaaaatccgttttgatctcaattccttcacatcttca |
21697976 |
T |
|
| Q |
178 |
ggattgtcgataagcgagtccatgaaagctgcaaaagaacaaatcccgtagtcgttgtcaaaatctggacacatctcatatgctatcaggttaaggaaag |
277 |
Q |
| |
|
|||| ||| || || || |||||||||||| || |||||||||| |||||||||| | |||||| ||||||||||||||||||||||| || || ||| |
|
|
| T |
21697975 |
ggatggtcaatgagtgactccatgaaagctacataagaacaaattacgtagtcgttcttaaaatcgggacacatctcatatgctatcagattgagataag |
21697876 |
T |
|
| Q |
278 |
tagcggctgatgtgtcgtccacaacgatctcaggaagagtcagt |
321 |
Q |
| |
|
|| |||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
21697875 |
taaaggctaatgtgtcgtccacaacgatctcaggtagagtcagt |
21697832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 74 - 275
Target Start/End: Complemental strand, 21630415 - 21630214
Alignment:
| Q |
74 |
gtaccaagtcagtacttatgatattgaaaagttcagcaacttcctcatcactcccaagggaattgagcaaaatcccttttgatcttagtaacttgacatc |
173 |
Q |
| |
|
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||| |||||||| | | ||| || || |
|
|
| T |
21630415 |
gtaccaagtcagtacttatgatattgaaaagatgggcaacttcctcatcactcccaagtttattgagcaaaatcccatttgatctcaattccttcacgtc |
21630316 |
T |
|
| Q |
174 |
ttcaggattgtcgataagcgagtccatgaaagctgcaaaagaacaaatcccgtagtcgttgtcaaaatctggacacatctcatatgctatcaggttaagg |
273 |
Q |
| |
|
|||||||| |||||| |||||||||||||||||| |||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
21630315 |
ttcaggatggtcgatgagcgagtccatgaaagctagaaaagaacaaatttcgtaatcgttctcaaaatctggacacatctcatatgctatcaggttgagg |
21630216 |
T |
|
| Q |
274 |
aa |
275 |
Q |
| |
|
|| |
|
|
| T |
21630215 |
aa |
21630214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 78 - 325
Target Start/End: Complemental strand, 21793445 - 21793198
Alignment:
| Q |
78 |
caagtcagtacttatgatattgaaaagttcagcaacttcctcatcactcccaagggaattgagcaaaatcccttttgatcttagtaacttgacatcttca |
177 |
Q |
| |
|
|||||| |||||||||||||||||||| | ||||||||||||||||||||||| |||| ||||||||||||||||||| | | ||| ||||||||| |
|
|
| T |
21793445 |
caagtcggtacttatgatattgaaaagatgggcaacttcctcatcactcccaagtttattgcgcaaaatcccttttgatctcaattccttcacatcttca |
21793346 |
T |
|
| Q |
178 |
ggattgtcgataagcgagtccatgaaagctgcaaaagaacaaatcccgtagtcgttgtcaaaatctggacacatctcatatgctatcaggttaaggaaag |
277 |
Q |
| |
|
|||| |||||| || || ||||||||| || ||||||||||||| |||| | ||| ||||||||||||||||||||||||||| ||||||| | ||||| |
|
|
| T |
21793345 |
ggatggtcgatgagtgactccatgaaaactacaaaagaacaaatttcgtatttgttctcaaaatctggacacatctcatatgctgtcaggttgaagaaag |
21793246 |
T |
|
| Q |
278 |
tagcggctgatgtgtcgtccacaacgatctcaggaagagtcagttctg |
325 |
Q |
| |
|
||| |||||| ||||| ||||| |||| ||||||||||||||||| |
|
|
| T |
21793245 |
tagaggctgaactgtcggtcacaatgatcataggaagagtcagttctg |
21793198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 69 - 286
Target Start/End: Complemental strand, 21705944 - 21705730
Alignment:
| Q |
69 |
gttaggtaccaagtcagtacttatgatattgaaaagttcagcaacttcctcatcactcccaagggaattgagcaaaatcccttttgatcttagtaacttg |
168 |
Q |
| |
|
||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||| || | || |||||||||||||||||| | || ||| |
|
|
| T |
21705944 |
gttagctaccaagtcagtacctatgatattgaaaagactggcaacttcctcatcactccaaaccg---tgcacaaaatcccttttgatctcaataccttc |
21705848 |
T |
|
| Q |
169 |
acatcttcaggattgtcgataagcgagtccatgaaagctgcaaaagaacaaatcccgtagtcgttgtcaaaatctggacacatctcatatgctatcaggt |
268 |
Q |
| |
|
|||||||| |||| |||||| || |||||||| |||||| || ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21705847 |
acatcttccggatggtcgatgagtgagtccatcaaagctacataagaacagatcccacagtcgttgtcaaaatctggacacatctcatatgctatcaggt |
21705748 |
T |
|
| Q |
269 |
taaggaaagtagcggctg |
286 |
Q |
| |
|
| || ||||||| ||||| |
|
|
| T |
21705747 |
tgagtaaagtagaggctg |
21705730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 282
Target Start/End: Original strand, 21803636 - 21803898
Alignment:
| Q |
17 |
tattacggtaatgatcatgtattttggctctaacttcaaaatatgtttctgagttaggtaccaagtcagtacttatgatattgaaaagttcagcaacttc |
116 |
Q |
| |
|
||||||| |||| |||| ||||||| || | | |||||||||| |||| ||||| | ||||| |||||| ||||||||||||||| | |||||||| |
|
|
| T |
21803636 |
tattacgataattttcatctattttgactttgatttcaaaatataattctatgttagattccaagccagtacctatgatattgaaaagattggcaacttc |
21803735 |
T |
|
| Q |
117 |
ctcatcactcccaagggaattgagcaaaatcccttttgatcttagtaacttgacatcttcaggattgtcgataagcgagtccatgaaagctgcaaaagaa |
216 |
Q |
| |
|
||||||||||| || || || |||||||||||||||||| | | ||| ||||||||||||| ||| || || ||||||||||||||| || ||||| |
|
|
| T |
21803736 |
ctcatcactccaaaagg---tgcacaaaatcccttttgatctcaatgccttcacatcttcaggatggtcaatgagagagtccatgaaagctacataagaa |
21803832 |
T |
|
| Q |
217 |
caaatcccgtagtcgttgtcaaaatctggacacatctcatatgctatcaggttaaggaaagtagcg |
282 |
Q |
| |
|
|||| | | |||||||| | |||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
21803833 |
caaaactcatagtcgttcttaaaatctggacacatctcatatgcaatcaggttaaggaaagtagcg |
21803898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 75 - 286
Target Start/End: Complemental strand, 21765564 - 21765356
Alignment:
| Q |
75 |
taccaagtcagtacttatgatattgaaaagttcagcaacttcctcatcactcccaagggaattgagcaaaatcccttttgatcttagtaacttgacatct |
174 |
Q |
| |
|
|||||||||||||| ||||||||||||||| ||||||||||||||||||| || | || |||||||||||||||||| | || ||| |||||| |
|
|
| T |
21765564 |
taccaagtcagtacctatgatattgaaaagactggcaacttcctcatcactccaaaccg---tgcacaaaatcccttttgatctcaataccttcacatct |
21765468 |
T |
|
| Q |
175 |
tcaggattgtcgataagcgagtccatgaaagctgcaaaagaacaaatcccgtagtcgttgtcaaaatctggacacatctcatatgctatcaggttaagga |
274 |
Q |
| |
|
|| |||| |||||| || |||||||| |||||| || ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| || | |
|
|
| T |
21765467 |
tccggatggtcgatgagtgagtccatcaaagctacataagaacagatcccacagtcgttgtcaaaatctggacacatctcatatgctatcaggttgagta |
21765368 |
T |
|
| Q |
275 |
aagtagcggctg |
286 |
Q |
| |
|
|| ||| ||||| |
|
|
| T |
21765367 |
aattagaggctg |
21765356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 155
Target Start/End: Complemental strand, 21639255 - 21639226
Alignment:
| Q |
126 |
cccaagggaattgagcaaaatcccttttga |
155 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
21639255 |
cccaagggaattgagcaaaatcccttttga |
21639226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0182 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0182
Description:
Target: scaffold0182; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 69 - 286
Target Start/End: Complemental strand, 26914 - 26700
Alignment:
| Q |
69 |
gttaggtaccaagtcagtacttatgatattgaaaagttcagcaacttcctcatcactcccaagggaattgagcaaaatcccttttgatcttagtaacttg |
168 |
Q |
| |
|
||||| ||||| ||| |||| ||||||||||||||| | ||||||||||||||||||| | || || |||||||| ||||||||| |||| ||| |
|
|
| T |
26914 |
gttagctaccaggtcggtacctatgatattgaaaaggttggcaacttcctcatcactccataagg---tggacaaaatcctttttgatctcagtaccttc |
26818 |
T |
|
| Q |
169 |
acatcttcaggattgtcgataagcgagtccatgaaagctgcaaaagaacaaatcccgtagtcgttgtcaaaatctggacacatctcatatgctatcaggt |
268 |
Q |
| |
|
||||||||||||| |||||| ||||||||||||| |||| || ||||||||||| ||||||||||||||||||||||||||||||||||| | ||||| |
|
|
| T |
26817 |
acatcttcaggatggtcgatgagcgagtccatgagagctacataagaacaaatctgatagtcgttgtcaaaatctggacacatctcatatgccaccaggt |
26718 |
T |
|
| Q |
269 |
taaggaaagtagcggctg |
286 |
Q |
| |
|
| |||||| ||||||||| |
|
|
| T |
26717 |
tgaggaaaatagcggctg |
26700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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