View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18974_high_90 (Length: 266)
Name: NF18974_high_90
Description: NF18974
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18974_high_90 |
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Alignment Details
Target: chr7 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 43535838 - 43536088
Alignment:
| Q |
1 |
ataaggtttggactaagaaattaatgtttaaatatcaataaatatttctattccattttctaacacttttgcatcatgatcagataaaaagttacatatt |
100 |
Q |
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| T |
43535838 |
ataaggtttggactaagaaattaatgtttaaatatcaataaatatttatattccattttctaacacttttgcatcatgatcagataaaaagttacatatt |
43535937 |
T |
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| Q |
101 |
tttactctaaaaaggggttgcatacaatattttgaaacaattgcatgttaatattgagtttattgagcactcaccaaccgtgtaaagtagttttagactg |
200 |
Q |
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| T |
43535938 |
tttactctaaaaaggggttgcatacaatattttgaaacaattgcatgttaatattgagtttattgagcactca-caaccgtgtaaagtagttttagactg |
43536036 |
T |
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| Q |
201 |
ttatctaataaaatcaatcaatttaccatgtcatgcaaataaatgtggaaga |
252 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43536037 |
ttatctaataaaatcaatcaatttaccatgtcatgcaaataaatgtggaaga |
43536088 |
T |
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