View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18974_low_111 (Length: 248)

Name: NF18974_low_111
Description: NF18974
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18974_low_111
NF18974_low_111
[»] chr3 (15 HSPs)
chr3 (18-248)||(46236863-46237093)
chr3 (18-225)||(46479642-46479849)
chr3 (21-225)||(5156097-5156301)
chr3 (21-219)||(46473787-46473985)
chr3 (21-233)||(5160119-5160330)
chr3 (41-151)||(51943816-51943926)
chr3 (21-151)||(46483974-46484104)
chr3 (18-149)||(45902882-45903013)
chr3 (18-222)||(46497800-46498007)
chr3 (28-225)||(46549063-46549260)
chr3 (35-88)||(47414276-47414329)
chr3 (54-233)||(45883837-45884016)
chr3 (103-233)||(46526576-46526706)
chr3 (104-218)||(46490568-46490682)
chr3 (172-225)||(51942982-51943035)
[»] chr4 (3 HSPs)
chr4 (125-233)||(15555856-15555964)
chr4 (23-88)||(35162428-35162493)
chr4 (23-87)||(35155408-35155472)
[»] chr8 (1 HSPs)
chr8 (18-88)||(9692784-9692854)
[»] chr7 (4 HSPs)
chr7 (26-72)||(16722155-16722201)
chr7 (26-72)||(17699169-17699215)
chr7 (32-76)||(17708274-17708318)
chr7 (32-76)||(17718098-17718142)
[»] chr2 (3 HSPs)
chr2 (176-224)||(20144470-20144518)
chr2 (176-224)||(20169256-20169304)
chr2 (176-224)||(20358982-20359030)


Alignment Details
Target: chr3 (Bit Score: 203; Significance: 1e-111; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 18 - 248
Target Start/End: Original strand, 46236863 - 46237093
Alignment:
Q  18 attgacgctcatctttgccttgattataaggaagataaagaactttaaaaccatcaaaatctccaataaaccgtttcttataggaggtcatgaagggaac 117  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  46236863 attgacactcatctttgccttgattataaggaagataaagaactttataaccatcaaaatctccaatataccgtttcttataggaggtcatgaagggaac 46236962  T
Q  118 tttgacggagctaccatttaaaaggtaaaaatcactgtctttcgttaccgaagtatcaaacttctcattccatgttcctttaaagtacattgcatttgca 217  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  46236963 tttgacggagctaccatttaaaaggtaacagtcactgtctttcgttaccgaagtatcaaacttctcattccatattcctttaaagtacattgcatttgca 46237062  T
Q  218 aatatgagtttggttaccactcacttatttt 248  Q
    |||||||||||||||||||||||| ||||||    
T  46237063 aatatgagtttggttaccactcacctatttt 46237093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 225
Target Start/End: Complemental strand, 46479849 - 46479642
Alignment:
Q  18 attgacgctcatctttgccttgattataaggaagataaagaactttaaaaccatcaaaatctccaataaaccgtttcttataggaggtcatgaagggaac 117  Q
    ||||||||| ||||| |||||| ||||||||||||   ||||||||||||||||||||| ||| ||||||| | ||||| | |  |||||||||||||||    
T  46479849 attgacgcttatcttcgccttgcttataaggaagaccgagaactttaaaaccatcaaaagctctaataaactgcttcttcttgctggtcatgaagggaac 46479750  T
Q  118 tttgacggagctaccatttaaaaggtaaaaatcactgtctttcgttaccgaagtatcaaacttctcattccatgttcctttaaagtacattgcatttgca 217  Q
     ||||| | ||||||||| ||||||| ||| ||   ||||| ||||   |||| ||||||||| |||||||| | |||||| ||||| | |||||| |||    
T  46479749 cttgactgggctaccattcaaaaggtgaaactcgtagtcttccgtttttgaagcatcaaacttatcattccacgctcctttgaagtatagtgcattggca 46479650  T
Q  218 aatatgag 225  Q
    || |||||    
T  46479649 aagatgag 46479642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 225
Target Start/End: Complemental strand, 5156301 - 5156097
Alignment:
Q  21 gacgctcatctttgccttgattataaggaagataaagaactttaaaaccatcaaaatctccaataaaccgtttcttataggaggtcatgaagggaacttt 120  Q
    |||||| |||||||||||  ||||| ||||||  |||||||||||| ||| || || || |||||||| | ||||  | |  ||||||||||||||| ||    
T  5156301 gacgcttatctttgccttttttatacggaagacgaagaactttaaagccaccataagcttcaataaactgattctcctcgctggtcatgaagggaacctt 5156202  T
Q  121 gacggagctaccatttaaaaggtaaaaatcactgtctttcgttaccgaagtatcaaacttctcattccatgttcctttaaagtacattgcatttgcaaat 220  Q
    ||| ||||| ||||| ||||||| |||||||  ||||||||||  | ||  ||||||||||||| |||||| |||||||||||| | |||||| |||||     
T  5156201 gaccgagctgccattcaaaaggtgaaaatcatagtctttcgttttcaaaacatcaaacttctcactccatgctcctttaaagtagagtgcattagcaaag 5156102  T
Q  221 atgag 225  Q
    |||||    
T  5156101 atgag 5156097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 219
Target Start/End: Complemental strand, 46473985 - 46473787
Alignment:
Q  21 gacgctcatctttgccttgattataaggaagataaagaactttaaaaccatcaaaatctccaataaaccgtttcttataggaggtcatgaagggaacttt 120  Q
    |||||| ||||| |||||| ||||||||||||  |||||||||||||||||||||| ||| ||||||| | ||||| | |   ||||| |||| ||| ||    
T  46473985 gacgcttatcttcgccttgcttataaggaagaccaagaactttaaaaccatcaaaagctctaataaactgcttcttcttgctagtcataaaggaaacctt 46473886  T
Q  121 gacggagctaccatttaaaaggtaaaaatcactgtctttcgttaccgaagtatcaaacttctcattccatgttcctttaaagtacattgcatttgcaaa 219  Q
     || ||||| ||||| | |||||||||||||  |||||| |||   |||| ||||| ||||| |||||||| ||||||||| |||| |||||| |||||    
T  46473885 aactgagctgccattgagaaggtaaaaatcatagtcttttgttgttgaagcatcaatcttctgattccatgatcctttaaaatacaatgcattagcaaa 46473787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 233
Target Start/End: Complemental strand, 5160330 - 5160119
Alignment:
Q  21 gacgctcatctttgccttgattataaggaagataaagaactttaaaaccatcaaaatctccaataaaccgtttcttataggaggtcatgaagggaacttt 120  Q
    |||||| |||||||||||  ||||| ||||||  ||||||||||||  | ||| || || |||||||| | ||||  | |  ||||||||||||||| ||    
T  5160330 gacgcttatctttgcctttcttatacggaagacgaagaactttaaagtcgtcataagcttcaataaactgattctcctcgctggtcatgaagggaacctt 5160231  T
Q  121 gacggagctaccatttaaaaggtaaaaatcactgtctttcgttaccgaagtatcaaacttctcattccatgttcctttaaagtacattgcatttgcaaat 220  Q
    ||| ||||| ||||| ||||||| |||||||  ||||||||||  ||||  ||||||||| ||| |||||| |||||||||||| | |||||| |||||     
T  5160230 gactgagct-ccattcaaaaggtgaaaatcatagtctttcgttttcgaaacatcaaacttatcactccatgctcctttaaagtagagtgcattagcaaag 5160132  T
Q  221 atgagtttggtta 233  Q
    |||||| ||||||    
T  5160131 atgagtctggtta 5160119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 51943926 - 51943816
Alignment:
Q  41 ttataaggaagataaagaactttaaaaccatcaaaatctccaataaaccgtttcttataggaggtcatgaagggaactttgacggagctaccatttaaaa 140  Q
    ||||||||||||| ||||||||||||| ||||| || || |||||||| | ||||||| |  ||||||||||||||| ||||| ||||||||||||| ||    
T  51943926 ttataaggaagatgaagaactttaaaatcatcataaacttcaataaactgcttcttattgctggtcatgaagggaaccttgactgagctaccatttagaa 51943827  T
Q  141 ggtaaaaatca 151  Q
    ||| |||||||    
T  51943826 ggtgaaaatca 51943816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 151
Target Start/End: Complemental strand, 46484104 - 46483974
Alignment:
Q  21 gacgctcatctttgccttgattataaggaagataaagaactttaaaaccatcaaaatctccaataaaccgtttcttataggaggtcatgaagggaacttt 120  Q
    |||||| ||||| |||||| ||||||||||||  |||||||||||||||||||||| ||| ||||||| | ||||| | |   ||||| |||||||| ||    
T  46484104 gacgcttatcttcgccttgcttataaggaagaccaagaactttaaaaccatcaaaagctctaataaactgcttcttcttgctagtcataaagggaacctt 46484005  T
Q  121 gacggagctaccatttaaaaggtaaaaatca 151  Q
    ||| ||||| ||||| | ||||| |||||||    
T  46484004 gactgagctgccattgagaaggtgaaaatca 46483974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 45903013 - 45902882
Alignment:
Q  18 attgacgctcatctttgccttgattataaggaagataaagaactttaaaaccatcaaaatctccaataaaccgtttcttataggaggtcatgaagggaac 117  Q
    ||||||||| |||||  ||||| | ||||||||||  ||| ||||| |||||||| ||| | |  |||||| |  |||| | |  |||||||||||||||    
T  45903013 attgacgcttatcttctccttgctcataaggaagacgaagtactttgaaaccatcgaaaacgcggataaactgcctcttctcgctggtcatgaagggaac 45902914  T
Q  118 tttgacggagctaccatttaaaaggtaaaaat 149  Q
     ||||| ||||||||||||| |||||||||||    
T  45902913 cttgactgagctaccatttagaaggtaaaaat 45902882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 222
Target Start/End: Complemental strand, 46498007 - 46497800
Alignment:
Q  18 attgacgctcatctttgccttgattataaggaagataaagaactttaaaaccatcaaaatctccaataaaccgtttctt---ataggaggtcatgaaggg 114  Q
    |||||||||  |||| |||||| |||||||||||   ||||||||||||| |||| ||||||| ||||||| | |||||   ||     |||||||||      
T  46498007 attgacgcttgtcttcgccttgcttataaggaaggccaagaactttaaaatcatcgaaatctctaataaactgcttcttctcatcactagtcatgaagtc 46497908  T
Q  115 aactttgacggagctaccatttaaaaggtaaaaatcactgtctttcgttaccgaagtatcaaacttctcattccatgttcctttaaagtacattgcattt 214  Q
    ||| || || ||| | ||||| ||||||| |||||||  | | |||||| |||||| |||||| || ||||||||   |||||||||||| | ||||||     
T  46497907 aaccttaactgagtttccattcaaaaggtgaaaatcatagacattcgtttccgaagcatcaaaattatcattccactctcctttaaagtatagtgcatta 46497808  T
Q  215 gcaaatat 222  Q
    ||||||||    
T  46497807 gcaaatat 46497800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 225
Target Start/End: Original strand, 46549063 - 46549260
Alignment:
Q  28 atctttgccttgattataaggaagataaagaactttaaaaccatcaaaatctccaataaaccgtttcttataggaggtcatgaagggaactttgacggag 127  Q
    |||||| ||||  ||||||||||||||||||||||| |||||||||||| | |  |||||| | |  ||   |  ||| ||||||||||| ||||| |||    
T  46549063 atcttttccttatttataaggaagataaagaactttgaaaccatcaaaaacactgataaactgatcattcctgctggttatgaagggaaccttgaccgag 46549162  T
Q  128 ctaccatttaaaaggtaaaaatcactgtctttcgttaccgaagtatcaaacttctcattccatgttcctttaaagtacattgcatttgcaaatatgag 225  Q
    || ||||| | ||||| |||||||    ||| | |  ||  ||||| ||||||||||| ||||| |||||| ||||| | |||||||||||| |||||    
T  46549163 ctgccattgagaaggtgaaaatcatatccttccatgtccatagtattaaacttctcatcccatgctcctttgaagtataatgcatttgcaaagatgag 46549260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 47414276 - 47414329
Alignment:
Q  35 ccttgattataaggaagataaagaactttaaaaccatcaaaatctccaataaac 88  Q
    |||| ||||||||||||  |||||||||||||| |||||||| |||||||||||    
T  47414276 cctttattataaggaaggcaaagaactttaaaatcatcaaaagctccaataaac 47414329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 233
Target Start/End: Original strand, 45883837 - 45884016
Alignment:
Q  54 aaagaactttaaaaccatcaaaatctccaataaaccgtttcttataggaggtcatgaagggaactttgacggagctaccatttaaaaggtaaaaatcact 153  Q
    |||| |||||||||||||||||| ||| ||||||  | |  || | |  ||||||||||||||||||||| || ||||||||   ||  | ||||||       
T  45883837 aaagcactttaaaaccatcaaaagctctaataaattgatctttcttgctggtcatgaagggaactttgactgaactaccattatgaatatgaaaatcgta 45883936  T
Q  154 gtctttcgttaccgaagtatcaaacttctcattccatgttcctttaaagtacattgcatttgcaaatatgagtttggtta 233  Q
    || ||| |||  ||||| |||||||   | |||||||| ||| |||||||||| |||||| |||||||||||| ||||||    
T  45883937 gtattttgttttcgaaggatcaaacggttgattccatgctcccttaaagtacaatgcattagcaaatatgagtctggtta 45884016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 233
Target Start/End: Original strand, 46526576 - 46526706
Alignment:
Q  103 ggtcatgaagggaactttgacggagctaccatttaaaaggtaaaaatcactgtctttcgttaccgaagtatcaaacttctcattccatgttccttt-aaa 201  Q
    ||||||||||||||| ||||| ||||| |||||| |||||| |||||||  || ||| |||  ||||| |  ||||||||  ||||||| |||||| |||    
T  46526576 ggtcatgaagggaaccttgactgagctgccattt-aaaggtgaaaatcatagttttttgttctcgaagcaggaaacttctttttccatgctcctttaaaa 46526674  T
Q  202 gtacattgcatttgcaaatatgagtttggtta 233  Q
     |||| ||| |||||||| |||||| ||||||    
T  46526675 atacagtgcgtttgcaaagatgagtctggtta 46526706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 218
Target Start/End: Complemental strand, 46490682 - 46490568
Alignment:
Q  104 gtcatgaagggaactttgacggagctaccatttaaaaggtaaaaatcactgtctttcgttaccgaagtatcaaacttctcattccatgttcctttaaagt 203  Q
    |||||||||||||| || |  ||||| ||||| ||||||| |||||||  ||||||||||   |||| ||||||||| ||||||||   |||||| ||||    
T  46490682 gtcatgaagggaaccttaattgagctgccattcaaaaggtgaaaatcatagtctttcgtttttgaagcatcaaacttatcattccacactcctttgaagt 46490583  T
Q  204 acattgcatttgcaa 218  Q
    | | |||||| ||||    
T  46490582 atagtgcattagcaa 46490568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 51943035 - 51942982
Alignment:
Q  172 atcaaacttctcattccatgttcctttaaagtacattgcatttgcaaatatgag 225  Q
    |||||||||||||||||||| |||| |||||||||  ||||| ||||| |||||    
T  51943035 atcaaacttctcattccatgctcctctaaagtacaacgcattagcaaagatgag 51942982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 9e-17; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 125 - 233
Target Start/End: Complemental strand, 15555964 - 15555856
Alignment:
Q  125 gagctaccatttaaaaggtaaaaatcactgtctttcgttaccgaagtatcaaacttctcattccatgttcctttaaagtacattgcatttgcaaatatga 224  Q
    ||||||||||| | ||||| |||||||  ||||||||||   |||| ||||||||||| || ||||  |||||||||||||| |||||||||||| ||||    
T  15555964 gagctaccattgagaaggtgaaaatcatagtctttcgttttggaagcatcaaacttctgataccatagtcctttaaagtacagtgcatttgcaaagatga 15555865  T
Q  225 gtttggtta 233  Q
    || ||||||    
T  15555864 gtctggtta 15555856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 35162493 - 35162428
Alignment:
Q  23 cgctcatctttgccttgattataaggaagataaagaactttaaaaccatcaaaatctccaataaac 88  Q
    ||||||||||| ||||| ||||||||||||  |||||||||||||||||||||| ||| |||||||    
T  35162493 cgctcatcttttccttgcttataaggaagacgaagaactttaaaaccatcaaaagctctaataaac 35162428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 35155472 - 35155408
Alignment:
Q  23 cgctcatctttgccttgattataaggaagataaagaactttaaaaccatcaaaatctccaataaa 87  Q
    ||||||||||| ||||| ||||| ||||||  |||||||||||||||||||||| ||| ||||||    
T  35155472 cgctcatcttttccttgcttatacggaagacgaagaactttaaaaccatcaaaagctctaataaa 35155408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 9692784 - 9692854
Alignment:
Q  18 attgacgctcatctttgccttgattataaggaagataaagaactttaaaaccatcaaaatctccaataaac 88  Q
    |||| |||| || ||| |||| |||||||||||||  |||||||||||||||||||||| ||| |||||||    
T  9692784 attgtcgcttattttttccttaattataaggaagacgaagaactttaaaaccatcaaaagctctaataaac 9692854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 31; Significance: 0.00000002; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 16722201 - 16722155
Alignment:
Q  26 tcatctttgccttgattataaggaagataaagaactttaaaaccatc 72  Q
    |||||||||||||| ||||||||||||  ||| ||||||||||||||    
T  16722201 tcatctttgccttgtttataaggaagaccaaggactttaaaaccatc 16722155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 17699215 - 17699169
Alignment:
Q  26 tcatctttgccttgattataaggaagataaagaactttaaaaccatc 72  Q
    |||||||||||||| ||||||||||||  ||| ||||||||||||||    
T  17699215 tcatctttgccttgtttataaggaagaccaaggactttaaaaccatc 17699169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 17708318 - 17708274
Alignment:
Q  32 ttgccttgattataaggaagataaagaactttaaaaccatcaaaa 76  Q
    |||||||| || |||||||||  ||||||||||||||||||||||    
T  17708318 ttgccttgtttgtaaggaagaccaagaactttaaaaccatcaaaa 17708274  T

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Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 17718142 - 17718098
Alignment:
Q  32 ttgccttgattataaggaagataaagaactttaaaaccatcaaaa 76  Q
    |||||||| || |||||||||  ||||||||||||||||||||||    
T  17718142 ttgccttgtttgtaaggaagaccaagaactttaaaaccatcaaaa 17718098  T

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Target: chr2 (Bit Score: 29; Significance: 0.0000003; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 20144518 - 20144470
Alignment:
Q  176 aacttctcattccatgttcctttaaagtacattgcatttgcaaatatga 224  Q
    |||||||||||||||| |||| ||||||||| |||||| ||||| ||||    
T  20144518 aacttctcattccatgctcctataaagtacaatgcattagcaaagatga 20144470  T

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Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 20169256 - 20169304
Alignment:
Q  176 aacttctcattccatgttcctttaaagtacattgcatttgcaaatatga 224  Q
    |||||||||||||||| |||| ||||||||| |||||| ||||| ||||    
T  20169256 aacttctcattccatgctcctataaagtacaatgcattagcaaagatga 20169304  T

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Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 20359030 - 20358982
Alignment:
Q  176 aacttctcattccatgttcctttaaagtacattgcatttgcaaatatga 224  Q
    |||||||||||||||| |||| ||||||||| |||||| ||||| ||||    
T  20359030 aacttctcattccatgctcctataaagtacaatgcattagcaaagatga 20358982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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