View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18974_low_120 (Length: 230)

Name: NF18974_low_120
Description: NF18974
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18974_low_120
NF18974_low_120
[»] chr6 (29 HSPs)
chr6 (1-230)||(30945675-30945904)
chr6 (1-228)||(30955932-30956162)
chr6 (1-59)||(17551359-17551415)
chr6 (12-84)||(16352152-16352222)
chr6 (1-59)||(2689046-2689100)
chr6 (45-81)||(15722537-15722573)
chr6 (45-81)||(31417330-31417366)
chr6 (14-81)||(32644624-32644689)
chr6 (23-81)||(1196059-1196115)
chr6 (23-81)||(2163703-2163759)
chr6 (23-81)||(2175336-2175392)
chr6 (1-59)||(8645343-8645399)
chr6 (1-59)||(13423003-13423059)
chr6 (1-59)||(22079544-22079600)
chr6 (1-59)||(25811819-25811875)
chr6 (45-84)||(32621799-32621838)
chr6 (49-83)||(1246397-1246431)
chr6 (16-81)||(3179999-3180062)
chr6 (24-81)||(5028269-5028324)
chr6 (43-81)||(7611496-7611534)
chr6 (16-81)||(33527436-33527499)
chr6 (12-81)||(16328691-16328760)
chr6 (8-59)||(1376399-1376448)
chr6 (8-59)||(1384147-1384196)
chr6 (45-81)||(3339533-3339569)
chr6 (26-81)||(12441539-12441592)
chr6 (1-59)||(24842403-24842457)
chr6 (45-81)||(29376749-29376785)
chr6 (45-81)||(30714681-30714717)
[»] chr1 (74 HSPs)
chr1 (1-81)||(41507175-41507253)
chr1 (16-81)||(16836111-16836174)
chr1 (1-81)||(18336159-18336236)
chr1 (26-81)||(50797792-50797845)
chr1 (23-81)||(40596057-40596113)
chr1 (1-59)||(50775137-50775193)
chr1 (8-81)||(33358146-33358217)
chr1 (1-81)||(48220125-48220202)
chr1 (23-81)||(21446221-21446277)
chr1 (23-81)||(27687522-27687578)
chr1 (42-81)||(34974780-34974819)
chr1 (23-81)||(40139127-40139183)
chr1 (23-81)||(49453492-49453548)
chr1 (1-59)||(52437529-52437585)
chr1 (2-59)||(5771729-5771784)
chr1 (16-81)||(19427522-19427585)
chr1 (12-81)||(42539419-42539486)
chr1 (16-81)||(46903482-46903545)
chr1 (8-81)||(47398439-47398510)
chr1 (23-79)||(5477166-5477220)
chr1 (9-81)||(8200088-8200157)
chr1 (1-81)||(11597649-11597727)
chr1 (1-81)||(14983785-14983863)
chr1 (1-81)||(44632541-44632618)
chr1 (1-81)||(49241486-49241563)
chr1 (45-82)||(52714978-52715015)
chr1 (9-76)||(1603011-1603076)
chr1 (12-59)||(9566952-9566997)
chr1 (1-84)||(19969543-19969623)
chr1 (8-59)||(24806209-24806258)
chr1 (23-81)||(30196725-30196782)
chr1 (45-81)||(30530608-30530644)
chr1 (16-79)||(41558007-41558068)
chr1 (8-59)||(42468627-42468676)
chr1 (1-59)||(649803-649859)
chr1 (1-59)||(3851192-3851248)
chr1 (45-84)||(18959002-18959041)
chr1 (1-59)||(30745021-30745077)
chr1 (1-59)||(30766472-30766528)
chr1 (23-81)||(32319311-32319367)
chr1 (23-81)||(37690430-37690486)
chr1 (23-81)||(45272163-45272219)
chr1 (1-59)||(46281471-46281526)
chr1 (1-59)||(47214243-47214298)
chr1 (1-59)||(47642587-47642643)
chr1 (23-81)||(48325781-48325837)
chr1 (13-59)||(48858858-48858902)
chr1 (1-83)||(50882091-50882170)
chr1 (1-59)||(52362517-52362572)
chr1 (12-81)||(36954672-36954737)
chr1 (16-81)||(43757600-43757663)
chr1 (12-81)||(44517953-44518020)
chr1 (26-83)||(45065907-45065962)
chr1 (1-57)||(16986975-16987028)
chr1 (16-81)||(30596724-30596789)
chr1 (1-81)||(34818025-34818103)
chr1 (3-59)||(49931588-49931642)
chr1 (1-81)||(50781551-50781628)
chr1 (48-81)||(51037978-51038011)
chr1 (45-81)||(3558847-3558883)
chr1 (1-59)||(7171218-7171272)
chr1 (45-81)||(9011646-9011682)
chr1 (45-81)||(19442507-19442543)
chr1 (12-59)||(30536026-30536071)
chr1 (12-59)||(37685365-37685410)
chr1 (12-59)||(37700108-37700153)
chr1 (45-81)||(40238439-40238475)
chr1 (45-81)||(42256461-42256497)
chr1 (22-81)||(48872030-48872087)
chr1 (45-81)||(48872984-48873020)
chr1 (45-81)||(50528091-50528127)
chr1 (8-59)||(51436759-51436808)
chr1 (23-82)||(51571415-51571472)
chr1 (1-59)||(52267238-52267292)
[»] chr8 (40 HSPs)
chr8 (23-79)||(14710896-14710950)
chr8 (1-81)||(5740766-5740844)
chr8 (1-81)||(30439487-30439564)
chr8 (12-84)||(32020457-32020527)
chr8 (1-81)||(39211054-39211132)
chr8 (8-79)||(157070-157139)
chr8 (1-84)||(26000547-26000628)
chr8 (23-81)||(37392131-37392187)
chr8 (23-81)||(40413352-40413408)
chr8 (45-83)||(6806907-6806945)
chr8 (45-81)||(6849295-6849331)
chr8 (26-81)||(7010686-7010739)
chr8 (1-60)||(12898910-12898967)
chr8 (45-81)||(36064031-36064067)
chr8 (12-59)||(44061752-44061797)
chr8 (23-81)||(5502372-5502428)
chr8 (23-81)||(6243046-6243102)
chr8 (1-59)||(25830226-25830282)
chr8 (1-59)||(25987767-25987823)
chr8 (1-59)||(35067195-35067251)
chr8 (23-81)||(37524431-37524487)
chr8 (45-84)||(39719282-39719321)
chr8 (1-59)||(41159870-41159925)
chr8 (1-59)||(43715909-43715965)
chr8 (16-81)||(45405815-45405878)
chr8 (25-81)||(1796497-1796551)
chr8 (46-83)||(24319339-24319376)
chr8 (1-81)||(34873849-34873927)
chr8 (1-81)||(41541870-41541947)
chr8 (42-83)||(44607700-44607741)
chr8 (1-59)||(2733023-2733077)
chr8 (12-59)||(6440116-6440161)
chr8 (47-79)||(6877586-6877618)
chr8 (12-59)||(7598743-7598788)
chr8 (29-84)||(11138905-11138958)
chr8 (45-81)||(13884194-13884230)
chr8 (45-81)||(17775463-17775499)
chr8 (45-81)||(38844824-38844860)
chr8 (45-81)||(42443105-42443141)
chr8 (12-59)||(43285954-43285999)
[»] chr7 (51 HSPs)
chr7 (1-84)||(7817647-7817726)
chr7 (23-81)||(41985103-41985159)
chr7 (1-59)||(36352565-36352623)
chr7 (8-80)||(237026-237096)
chr7 (23-81)||(22330634-22330690)
chr7 (23-81)||(37351993-37352049)
chr7 (1-59)||(42584837-42584893)
chr7 (8-81)||(3937109-3937180)
chr7 (23-76)||(36990058-36990109)
chr7 (25-81)||(2469704-2469758)
chr7 (1-81)||(45420041-45420119)
chr7 (49-81)||(32919018-32919050)
chr7 (45-81)||(34654568-34654604)
chr7 (45-81)||(41080127-41080163)
chr7 (45-81)||(41227068-41227104)
chr7 (1-59)||(1471272-1471327)
chr7 (1-59)||(13152627-13152683)
chr7 (1-59)||(18111592-18111648)
chr7 (1-79)||(23680019-23680095)
chr7 (1-59)||(34978331-34978387)
chr7 (23-81)||(37856168-37856224)
chr7 (1-59)||(38340363-38340419)
chr7 (1-59)||(41430132-41430188)
chr7 (8-82)||(46725617-46725688)
chr7 (1-59)||(46829514-46829569)
chr7 (1-82)||(3062342-3062420)
chr7 (24-81)||(5905969-5906024)
chr7 (1-82)||(22816950-22817029)
chr7 (16-81)||(25887595-25887658)
chr7 (16-81)||(34264595-34264658)
chr7 (1-81)||(3293142-3293219)
chr7 (23-79)||(21839136-21839190)
chr7 (1-59)||(39029895-39029949)
chr7 (1-81)||(47078232-47078309)
chr7 (26-81)||(2323305-2323358)
chr7 (45-81)||(2347093-2347129)
chr7 (1-59)||(4292463-4292518)
chr7 (45-81)||(4971291-4971327)
chr7 (45-81)||(19426581-19426617)
chr7 (26-81)||(24044753-24044806)
chr7 (45-81)||(24700122-24700158)
chr7 (45-81)||(27164871-27164907)
chr7 (45-81)||(29162313-29162349)
chr7 (12-59)||(30941420-30941465)
chr7 (45-81)||(33050184-33050220)
chr7 (49-81)||(38218378-38218410)
chr7 (23-82)||(38547293-38547350)
chr7 (12-59)||(47448861-47448906)
chr7 (45-81)||(47530325-47530361)
chr7 (42-82)||(49025334-49025374)
chr7 (45-81)||(49128724-49128760)
[»] chr4 (63 HSPs)
chr4 (1-81)||(42490921-42490999)
chr4 (16-81)||(37731927-37731990)
chr4 (1-81)||(5386385-5386463)
chr4 (1-81)||(28657422-28657499)
chr4 (12-74)||(1627550-1627610)
chr4 (23-81)||(28676155-28676211)
chr4 (23-81)||(39241304-39241360)
chr4 (12-81)||(2109444-2109511)
chr4 (1-58)||(5249904-5249959)
chr4 (12-81)||(12387657-12387724)
chr4 (8-81)||(43769724-43769794)
chr4 (16-81)||(46686246-46686308)
chr4 (12-81)||(50980603-50980670)
chr4 (12-80)||(17367091-17367156)
chr4 (1-81)||(31657659-31657736)
chr4 (8-81)||(45143659-45143731)
chr4 (8-81)||(45152428-45152500)
chr4 (23-81)||(51359800-51359860)
chr4 (45-81)||(8026787-8026823)
chr4 (45-81)||(9162067-9162103)
chr4 (45-81)||(18568849-18568885)
chr4 (12-79)||(22072263-22072328)
chr4 (26-81)||(32365673-32365726)
chr4 (1-59)||(2268488-2268544)
chr4 (23-81)||(4511826-4511882)
chr4 (8-81)||(4949519-4949588)
chr4 (23-81)||(5234474-5234530)
chr4 (1-59)||(10250496-10250552)
chr4 (1-59)||(23369313-23369369)
chr4 (1-59)||(28458358-28458413)
chr4 (23-81)||(28899218-28899274)
chr4 (1-59)||(30170001-30170056)
chr4 (23-81)||(30778267-30778323)
chr4 (1-59)||(37514113-37514168)
chr4 (42-81)||(41262649-41262688)
chr4 (1-59)||(42815439-42815494)
chr4 (1-59)||(44257710-44257766)
chr4 (23-81)||(46173551-46173607)
chr4 (1-59)||(51577649-51577705)
chr4 (1-59)||(51986076-51986132)
chr4 (23-81)||(54036532-54036588)
chr4 (45-79)||(925096-925130)
chr4 (43-81)||(40590613-40590651)
chr4 (1-81)||(17683237-17683314)
chr4 (1-73)||(29891865-29891935)
chr4 (25-81)||(32621639-32621693)
chr4 (23-79)||(48326555-48326609)
chr4 (24-84)||(52846230-52846288)
chr4 (45-81)||(169536-169572)
chr4 (45-81)||(3078942-3078978)
chr4 (45-81)||(3222990-3223026)
chr4 (12-59)||(6520823-6520868)
chr4 (45-81)||(9032781-9032817)
chr4 (45-81)||(15638162-15638198)
chr4 (45-81)||(23094377-23094413)
chr4 (45-81)||(31221414-31221450)
chr4 (1-59)||(33860682-33860736)
chr4 (45-81)||(38864770-38864806)
chr4 (45-81)||(39010171-39010207)
chr4 (45-81)||(44368236-44368272)
chr4 (45-81)||(48099812-48099848)
chr4 (1-52)||(54000740-54000789)
chr4 (1-60)||(55601682-55601738)
[»] chr2 (41 HSPs)
chr2 (1-81)||(14891070-14891148)
chr2 (22-81)||(22353177-22353234)
chr2 (23-81)||(29795448-29795504)
chr2 (16-81)||(24727427-24727490)
chr2 (42-80)||(33417236-33417274)
chr2 (42-84)||(44105122-44105164)
chr2 (17-81)||(7121391-7121453)
chr2 (16-80)||(17264071-17264133)
chr2 (1-81)||(40700208-40700286)
chr2 (1-81)||(42678762-42678839)
chr2 (8-81)||(25086336-25086404)
chr2 (1-60)||(42372513-42372570)
chr2 (26-81)||(42607536-42607589)
chr2 (1-59)||(9207624-9207680)
chr2 (1-59)||(9760052-9760108)
chr2 (1-59)||(18254190-18254246)
chr2 (23-81)||(25801816-25801872)
chr2 (1-59)||(28245763-28245818)
chr2 (1-59)||(31578469-31578525)
chr2 (1-59)||(42532719-42532775)
chr2 (8-81)||(3012834-3012904)
chr2 (12-81)||(4138177-4138244)
chr2 (16-81)||(9834077-9834140)
chr2 (12-81)||(13538242-13538309)
chr2 (45-79)||(19529545-19529579)
chr2 (8-61)||(23352893-23352943)
chr2 (16-81)||(27329105-27329168)
chr2 (12-81)||(33737325-33737392)
chr2 (1-81)||(26277108-26277185)
chr2 (1-61)||(40937045-40937102)
chr2 (1-61)||(42866783-42866840)
chr2 (45-81)||(3196121-3196157)
chr2 (26-81)||(6646836-6646889)
chr2 (45-81)||(21805820-21805856)
chr2 (8-59)||(25881579-25881627)
chr2 (45-81)||(27307265-27307301)
chr2 (45-81)||(30974023-30974059)
chr2 (45-81)||(36909877-36909913)
chr2 (26-81)||(37966368-37966421)
chr2 (45-81)||(39233736-39233772)
chr2 (12-59)||(44050050-44050095)
[»] chr3 (52 HSPs)
chr3 (1-79)||(55322697-55322773)
chr3 (16-81)||(1765405-1765468)
chr3 (1-81)||(9753231-9753309)
chr3 (1-81)||(28700473-28700551)
chr3 (25-81)||(47683802-47683856)
chr3 (1-81)||(49761320-49761397)
chr3 (1-81)||(26672413-26672488)
chr3 (1-59)||(42358619-42358675)
chr3 (23-81)||(43169756-43169812)
chr3 (13-81)||(52564640-52564704)
chr3 (12-81)||(30580134-30580201)
chr3 (1-82)||(46966081-46966160)
chr3 (1-81)||(48893355-48893433)
chr3 (1-81)||(55361214-55361292)
chr3 (1-59)||(20080108-20080162)
chr3 (23-82)||(35554118-35554175)
chr3 (22-81)||(46952950-46953007)
chr3 (1-59)||(288760-288816)
chr3 (1-59)||(5244263-5244319)
chr3 (1-59)||(6178406-6178462)
chr3 (1-59)||(26014846-26014902)
chr3 (1-59)||(26550272-26550328)
chr3 (1-59)||(29573337-29573392)
chr3 (1-59)||(39629819-39629875)
chr3 (1-59)||(41505525-41505581)
chr3 (1-59)||(49167785-49167841)
chr3 (23-81)||(50745561-50745617)
chr3 (23-81)||(52431203-52431259)
chr3 (12-81)||(9719444-9719511)
chr3 (12-84)||(35377073-35377144)
chr3 (1-58)||(38926663-38926718)
chr3 (42-83)||(39928978-39929019)
chr3 (1-81)||(50876343-50876421)
chr3 (1-81)||(54195352-54195430)
chr3 (45-81)||(7248-7284)
chr3 (45-81)||(462435-462471)
chr3 (45-81)||(8254028-8254064)
chr3 (45-81)||(11327109-11327145)
chr3 (13-84)||(14771576-14771648)
chr3 (26-81)||(23906993-23907046)
chr3 (26-81)||(28884492-28884545)
chr3 (12-59)||(29917015-29917060)
chr3 (12-59)||(29966168-29966213)
chr3 (49-81)||(31206889-31206921)
chr3 (45-81)||(34021497-34021533)
chr3 (45-81)||(35074124-35074160)
chr3 (45-81)||(47101523-47101559)
chr3 (45-81)||(48405411-48405447)
chr3 (12-59)||(48405445-48405490)
chr3 (45-81)||(49196697-49196733)
chr3 (26-81)||(50146489-50146542)
chr3 (45-81)||(52454128-52454164)
[»] scaffold0054 (1 HSPs)
scaffold0054 (23-81)||(31603-31659)
[»] chr5 (41 HSPs)
chr5 (1-79)||(1839326-1839401)
chr5 (23-81)||(14206401-14206457)
chr5 (1-59)||(38493659-38493715)
chr5 (23-84)||(33910091-33910150)
chr5 (1-58)||(29463029-29463086)
chr5 (23-79)||(33567226-33567280)
chr5 (26-81)||(372726-372779)
chr5 (26-81)||(6865793-6865846)
chr5 (45-81)||(27440480-27440516)
chr5 (45-81)||(41460117-41460153)
chr5 (8-79)||(41865607-41865676)
chr5 (1-59)||(6940131-6940186)
chr5 (1-59)||(13089762-13089818)
chr5 (23-81)||(13734363-13734419)
chr5 (1-59)||(18695353-18695408)
chr5 (1-59)||(20770166-20770221)
chr5 (1-59)||(22098290-22098346)
chr5 (1-59)||(41175687-41175742)
chr5 (43-81)||(7927356-7927394)
chr5 (1-81)||(9226314-9226390)
chr5 (43-81)||(16143391-16143429)
chr5 (12-81)||(19952012-19952079)
chr5 (1-74)||(42211538-42211609)
chr5 (3-59)||(611899-611953)
chr5 (1-81)||(3640178-3640255)
chr5 (44-81)||(13461765-13461802)
chr5 (12-80)||(34080293-34080359)
chr5 (1-57)||(36738984-36739038)
chr5 (1-81)||(42267358-42267436)
chr5 (1-60)||(884475-884532)
chr5 (45-81)||(3109621-3109657)
chr5 (45-81)||(6420673-6420709)
chr5 (12-59)||(7552957-7553002)
chr5 (12-59)||(11148546-11148591)
chr5 (12-59)||(14532539-14532584)
chr5 (45-81)||(14914373-14914409)
chr5 (45-81)||(17063866-17063902)
chr5 (45-81)||(27546929-27546965)
chr5 (23-78)||(29227721-29227774)
chr5 (1-60)||(35649968-35650025)
chr5 (45-81)||(42699058-42699094)
[»] scaffold0532 (1 HSPs)
scaffold0532 (1-59)||(10999-11054)
[»] scaffold0286 (1 HSPs)
scaffold0286 (23-81)||(18650-18706)
[»] scaffold0128 (1 HSPs)
scaffold0128 (14-59)||(10971-11014)
[»] scaffold0174 (1 HSPs)
scaffold0174 (12-59)||(34785-34830)


Alignment Details
Target: chr6 (Bit Score: 222; Significance: 1e-122; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 30945904 - 30945675
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttcttttccatgatatagtcaca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  30945904 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttctcttccatgatatagtcaca 30945805  T
Q  101 aagcttgggacattttccaccctctaacttgtgtgtgtgtttgtgaaatcaagtgacaatacaaaaagtcaggatagtaaaaatgaacttcataaaaatc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30945804 aagcttgggacattttccaccctctaacttgtgtgtgtgtttgtgaaatcaagtgacaatacaaaaagtcaggatagtaaaaatgaacttcataaaaatc 30945705  T
Q  201 aataacagtacaaacttctactcttctttg 230  Q
    ||||||| ||||||||||||||||||||||    
T  30945704 aataacaatacaaacttctactcttctttg 30945675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 30956162 - 30955932
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttcttttccatgatatagtcaca 100  Q
    |||||| |||||||||||||| ||||||||| ||| ||||  |  |||||||||||||||| | ||||||| ||||||||| ||||||||| ||||||||    
T  30956162 aatagagagataaagtaaaatgataatgtgaatataagagtta--aagttgtcacaaaatggtggtataaacatcatttctcttccatgatttagtcaca 30956065  T
Q  101 aagcttgggacattttccaccctctaacttgtgtgtgtgtttgtgaaatcaagtgacaatac-----aaaaagtcaggatagtaaaaatgaacttcataa 195  Q
    ||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||     |||||||||||||||||||||||||||||||||    
T  30956064 aagcttgggacattttcgaccctccaacttgtgtgtgtgtttatgaaatcaagtgacaatacaaattaaaaagtcaggatagtaaaaatgaacttcataa 30955965  T
Q  196 aaatcaataacagtacaaacttctactcttctt 228  Q
    |||||||| |||  |||| ||| ||| ||||||    
T  30955964 aaatcaatgacaaaacaaccttttacacttctt 30955932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 17551359 - 17551415
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||||||||||||| ||||||||||||||||||  ||||||||||| ||||||    
T  17551359 aatagagagataaagtaaaaacataatgtgagtatgaga--gagaaagttgttacaaaa 17551415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 16352152 - 16352222
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttctttt 84  Q
    |||||||||  ||||||||| ||||||||  ||||| |||| | |||||| ||||||||||||||||||||||    
T  16352152 aaagtaaaaatataatgtgattatgagag--agaaaattgttataaaatggttgtataaatatcatttctttt 16352222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 2689046 - 2689100
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| |||||||||||||  |||||||||||||||||  ||||||||||||||||||    
T  2689046 aatagagagataaagtaaaa--ataatgtgagtatgaga--gagaaagttgtcacaaaa 2689100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 15722537 - 15722573
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||||||||| |||||||||||||    
T  15722537 aaagttgtcacaaaatgattgtacaaatatcatttct 15722573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 31417330 - 31417366
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||| ||||||||||||||||||||||||||    
T  31417330 aaagttgtcataaaatgattgtataaatatcatttct 31417366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 32644689 - 32644624
Alignment:
Q  14 agtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||  ||||||||||||||||||  |||||||||||| |||||  ||||| |||||||||||||    
T  32644689 agtaaaaatataatgtgagtatgagag--agaaagttgtcaaaaaatagttgtacaaatatcatttct 32644624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 1196115 - 1196059
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||| ||||  |||||||||||| ||| |||||||| |||||||||||||    
T  1196115 ataatgtgagtattagag--agaaagttgtcaaaaagtgattgtacaaatatcatttct 1196059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 2163759 - 2163703
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||| ||||||||||  ||||| |||||||||| |||||||| |||||||||||||    
T  2163759 ataatgtaagtatgagag--agaaaattgtcacaaattgattgtacaaatatcatttct 2163703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 2175392 - 2175336
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||| ||||||||||  ||||| |||||||||| |||||||| |||||||||||||    
T  2175392 ataatgtaagtatgagag--agaaaattgtcacaaattgattgtacaaatatcatttct 2175336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 8645399 - 8645343
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||| |||||||||  |||||||||||||||||  ||||||||||||||||||    
T  8645399 aatagagagagaaagtaaaaggataatgtgagtatgaga--gagaaagttgtcacaaaa 8645343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 13423059 - 13423003
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||| |||||||||  |||||||||||||||||  ||||||||||||||||||    
T  13423059 aatagagagagaaagtaaaaatataatgtgagtatgaga--gagaaagttgtcacaaaa 13423003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 22079544 - 22079600
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||| ||||||||| |||||||||||| |||||  ||||||||||||||||||    
T  22079544 aatagagagagaaagtaaaaacataatgtgagtgtgaga--gagaaagttgtcacaaaa 22079600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 25811819 - 25811875
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||| |||||||||  |||||||||||||||||  ||||||||||||||||||    
T  25811819 aatagagagagaaagtaaaaagataatgtgagtatgaga--gagaaagttgtcacaaaa 25811875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 32621838 - 32621799
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttctttt 84  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  32621838 aaagttgtcataaaatggttgtataaatatcatttctttt 32621799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 83
Target Start/End: Original strand, 1246397 - 1246431
Alignment:
Q  49 ttgtcacaaaatgattgtataaatatcatttcttt 83  Q
    ||||||||||||||||||| |||||||||||||||    
T  1246397 ttgtcacaaaatgattgtaaaaatatcatttcttt 1246431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 3179999 - 3180062
Alignment:
Q  16 taaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| ||||||||| ||| ||||  | |||||||||| |||||||||||| |||||||||||||    
T  3179999 taaaatgataatgtgaatataagag--ataaagttgtcaaaaaatgattgtacaaatatcatttct 3180062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 5028269 - 5028324
Alignment:
Q  24 taatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||| ||||  |||||||||||||||||||  ||| ||||||||||||||    
T  5028269 taatgtgagtataagag--agaaagttgtcacaaaatggatgtttaaatatcatttct 5028324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 7611534 - 7611496
Alignment:
Q  43 agaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  7611534 agaaagttgtcacaaaatgattgttcaaatatcatttct 7611496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 33527499 - 33527436
Alignment:
Q  16 taaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| |||||||||| |||||||  |||||||| ||||||| |  |||||||||||||||||||    
T  33527499 taaaatgataatgtgaggatgagag--agaaagttatcacaaagtagttgtataaatatcatttct 33527436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 16328691 - 16328760
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||  |||||||||||||  ||| || |||||||| | |||||| ||||| |||||||||||||    
T  16328691 aaagtaaaaatataatgtgagtatatgagagataaagttgttataaaatggttgtacaaatatcatttct 16328760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 1376448 - 1376399
Alignment:
Q  8 agataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||||||||||  ||||||||||||| |||  ||||||||||||||||||    
T  1376448 agataaagtaaaaatataatgtgagtataaga--gagaaagttgtcacaaaa 1376399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 1384196 - 1384147
Alignment:
Q  8 agataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||||||||||  ||||||||||||| |||  ||||||||||||||||||    
T  1384196 agataaagtaaaaatataatgtgagtataaga--gagaaagttgtcacaaaa 1384147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 3339533 - 3339569
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  3339533 aaagttgtcacaaaatggttgtacaaatatcatttct 3339569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 12441592 - 12441539
Alignment:
Q  26 atgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||||  |||||||||||||||| |  ||||| |||||||||||||    
T  12441592 atgtgagtatgagag--agaaagttgtcacaaagtagttgtacaaatatcatttct 12441539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 24842457 - 24842403
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| |||||||||||||  |||||||||||||||||  ||||||| ||||||||||    
T  24842457 aatagagagataaagtaaaa--ataatgtgagtatgaga--gagaaagctgtcacaaaa 24842403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 29376749 - 29376785
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  29376749 aaagttgtcacaaaatggttgtaaaaatatcatttct 29376785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 30714717 - 30714681
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||| |||||||||||||||||| |||||||||||||    
T  30714717 aaagctgtcacaaaatgattgtacaaatatcatttct 30714681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 4e-22; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 41507175 - 41507253
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||||||| | ||||||||||||||||||  |||||||||||||||||||| ||||| |||||||||||||    
T  41507175 aatagatagataaagtaagaacataatgtgagtatgaga--gagaaagttgtcacaaaatggttgtacaaatatcatttct 41507253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 16836111 - 16836174
Alignment:
Q  16 taaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||| |||||||||||||||||||  | ||||||||||||||||||||||| |||||||||||||    
T  16836111 taaaaacataatgtgagtatgagag--aaaaagttgtcacaaaatgattgtacaaatatcatttct 16836174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 18336236 - 18336159
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| ||||||||||||| | |||||||||||||||||  |||||||||||||||||||| |||  |||||||||||||    
T  18336236 aatagagagataaagtaaaaac-taatgtgagtatgagag--agaaagttgtcacaaaatgaatgttcaaatatcatttct 18336159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 50797845 - 50797792
Alignment:
Q  26 atgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||||  ||||||||||||||||||||||||| |||||||||||||    
T  50797845 atgtgagtatgagag--agaaagttgtcacaaaatgattgtacaaatatcatttct 50797792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 40596057 - 40596113
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||||  ||||||||||||||||||| ||||| |||||||||||||    
T  40596057 ataatgtgagtatgagag--agaaagttgtcacaaaatggttgtacaaatatcatttct 40596113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 50775137 - 50775193
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||||||||||||| ||||||||||||||||||  ||||||||||||||||||    
T  50775137 aatagagagataaagtaaaaacataatgtgagtatgaga--gagaaagttgtcacaaaa 50775193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 33358146 - 33358217
Alignment:
Q  8 agataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||  |||||||||||||||||  ||||||||||||||||||||  |||  |||||||||||||    
T  33358146 agataaagtaaaaaaataatgtgagtatgaga--gagaaagttgtcacaaaatggatgttcaaatatcatttct 33358217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 48220125 - 48220202
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| |||||||||||||  ||||||||||||||||||  |||||||||||||||||||  |||  |||||||||||||    
T  48220125 aatagagagataaagtaaaaa-ataatgtgagtatgagag--agaaagttgtcacaaaatggatgttcaaatatcatttct 48220202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 21446221 - 21446277
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||||  ||||||||||   ||||||||||||||||||||||||||    
T  21446221 ataatgtgagtatgagag--agaaagttgtactaaaatgattgtataaatatcatttct 21446277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 27687522 - 27687578
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||||  | ||||||||||||||||| ||||| |||||||||||||    
T  27687522 ataatgtgagtatgagag--ataaagttgtcacaaaatggttgtacaaatatcatttct 27687578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 81
Target Start/End: Original strand, 34974780 - 34974819
Alignment:
Q  42 gagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  34974780 gagaaagttgtcacaaaatggttgtataaatatcatttct 34974819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 40139183 - 40139127
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||||  |||||||||||| |||||| ||||| |||||||||||||    
T  40139183 ataatgtgagtatgagag--agaaagttgtcataaaatggttgtacaaatatcatttct 40139127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 49453548 - 49453492
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||||  |||||||||||||||| || ||||| |||||||||||||    
T  49453548 ataatgtgagtatgagag--agaaagttgtcacaaagtggttgtacaaatatcatttct 49453492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 52437585 - 52437529
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| |||||||||||||  |||||||||||||||||  ||||||||||||||||||    
T  52437585 aatagaaagataaagtaaaaatataatgtgagtatgaga--gagaaagttgtcacaaaa 52437529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 5771729 - 5771784
Alignment:
Q  2 atagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    ||||| ||| |||||||||| |||||||||||||||||  ||||||||||||||||||    
T  5771729 atagagagagaaagtaaaatgataatgtgagtatgaga--gagaaagttgtcacaaaa 5771784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 19427585 - 19427522
Alignment:
Q  16 taaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| |||||||||||||| |||  ||||||||||  ||||||| |||||||||||||||||||    
T  19427585 taaaattataatgtgagtatgtgag--agaaagttgtaccaaaatggttgtataaatatcatttct 19427522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 42539486 - 42539419
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||| |||| |||||||||||| ||||||  |||||||||||||| |||| ||||| |||||||||||||    
T  42539486 aaagcaaaaacataatgtgagtctgagag--agaaagttgtcacataatggttgtacaaatatcatttct 42539419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 46903545 - 46903482
Alignment:
Q  16 taaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||| |||||||||||||||||||  ||||||||||  ||||||| ||||| |||||||||||||    
T  46903545 taaaaacataatgtgagtatgagag--agaaagttgtatcaaaatggttgtacaaatatcatttct 46903482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 47398439 - 47398510
Alignment:
Q  8 agataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||| ||| ||||||||||||||||||  |||||| |||||| ||||||| |||  |||||||||||||    
T  47398439 agataaagtgaaaacataatgtgagtatgaga--gagaaaattgtcaaaaaatgaatgttcaaatatcatttct 47398510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 5477166 - 5477220
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcattt 79  Q
    ||||||||||||||||||  |||||||||||||||| || ||||| |||||||||||    
T  5477166 ataatgtgagtatgagag--agaaagttgtcacaaagtggttgtacaaatatcattt 5477220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 8200157 - 8200088
Alignment:
Q  9 gataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||  ||||||||||||||||||  |||||||||||||||||||  |||  |||||||||||||    
T  8200157 gataaagtaaaaa-ataatgtgagtatgagag--agaaagttgtcacaaaatggatgttcaaatatcatttct 8200088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 11597727 - 11597649
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| ||| ||||||||| |||||||||||||||  ||  |||||||||||||||| || ||||| | |||||||||||    
T  11597727 aatagagagagaaagtaaaaacataatgtgagtatggcag--agaaagttgtcacaaattggttgtacagatatcatttct 11597649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 14983863 - 14983785
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| ||| ||||||||| |||||||||| ||||||||  |||||||||| | ||| || ||||| |||||||||||||    
T  14983863 aatagagagagaaagtaaaaacataatgtgaatatgagag--agaaagttgttaaaaagtggttgtacaaatatcatttct 14983785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 44632618 - 44632541
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| |||||||||||||  ||||||||||||||||||  ||||||||||||| |||||  |||  |||||||||||||    
T  44632618 aatagagagataaagtaaaaa-ataatgtgagtatgagag--agaaagttgtcaccaaatggatgttcaaatatcatttct 44632541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 49241486 - 49241563
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| |||||||||||||  ||||||||||||||||||  |||||||||||||||| ||  |||  |||||||||||||    
T  49241486 aatagacagataaagtaaaaa-ataatgtgagtatgagag--agaaagttgtcacaaagtggatgttcaaatatcatttct 49241563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 52715015 - 52714978
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttctt 82  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  52715015 aaagttgtcacaaaatgattgtacaaatatcatttctt 52714978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 1603076 - 1603011
Alignment:
Q  9 gataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatca 76  Q
    |||||||||||| || |||||||||||||||  ||||||||||| | ||||| |||||| ||||||||    
T  1603076 gataaagtaaaaacacaatgtgagtatgaga--gagaaagttgttaaaaaataattgtacaaatatca 1603011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 59
Target Start/End: Original strand, 9566952 - 9566997
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    ||||||||| ||||||||||||||||||  ||||||||||||||||||    
T  9566952 aaagtaaaaacataatgtgagtatgaga--gagaaagttgtcacaaaa 9566997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 19969543 - 19969623
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttctttt 84  Q
    |||||| |||||||||||||   |||||||||||||||||  |||||||||||| ||||||  |||  ||||||||||||||||    
T  19969543 aatagagagataaagtaaaaag-taatgtgagtatgagag--agaaagttgtcataaaatggatgttcaaatatcatttctttt 19969623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 24806209 - 24806258
Alignment:
Q  8 agataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||||||||||| ||||| |||||||||||  ||||||||||||||||||    
T  24806209 agataaagtaaaatgataatatgagtatgaga--gagaaagttgtcacaaaa 24806258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 30196782 - 30196725
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaat-gattgtataaatatcatttct 81  Q
    ||||||||||||||||||  |||||||||||| ||||| ||||||| |||||||||||||    
T  30196782 ataatgtgagtatgagag--agaaagttgtcaaaaaattgattgtagaaatatcatttct 30196725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 30530608 - 30530644
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||| |||||||||||||||||||    
T  30530608 aaagttgtcacaaaatggttgtataaatatcatttct 30530644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 41558068 - 41558007
Alignment:
Q  16 taaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcattt 79  Q
    ||||| ||||||||||||||||||| | ||  |||||||||||||| ||||| |||||||||||    
T  41558068 taaaaacataatgtgagtatgagagagtga--gttgtcacaaaatggttgtacaaatatcattt 41558007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 42468676 - 42468627
Alignment:
Q  8 agataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||||||||||| ||||||| |||||||||  ||||||||||||||||||    
T  42468676 agataaagtaaaataataatgtaagtatgaga--gagaaagttgtcacaaaa 42468627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 649859 - 649803
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||| |||||||||  |||||||||||||||||  ||||||||||||||||||    
T  649859 aatagagagagaaagtaaaaagataatgtgagtatgaga--gagaaagttgtcacaaaa 649803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 3851248 - 3851192
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| |||| ||||||||  |||||||||||||||||  ||||||||||||||||||    
T  3851248 aatagagagatcaagtaaaaagataatgtgagtatgaga--gagaaagttgtcacaaaa 3851192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 18959041 - 18959002
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttctttt 84  Q
    |||||||| |||||||| ||||||||||||||||||||||    
T  18959041 aaagttgtaacaaaatggttgtataaatatcatttctttt 18959002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 30745077 - 30745021
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| |||||||||||||| ||||| ||||||||| |  ||||||||||||||||||    
T  30745077 aatagagagataaagtaaaattataatatgagtatgata--gagaaagttgtcacaaaa 30745021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 30766528 - 30766472
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| |||||||||||||| ||||| ||||||||| |  ||||||||||||||||||    
T  30766528 aatagagagataaagtaaaattataatatgagtatgata--gagaaagttgtcacaaaa 30766472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 32319311 - 32319367
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||||  ||||||||||||| |||||  ||| ||||||||||||||    
T  32319311 ataatgtgagtatgagag--agaaagttgtcaccaaatggatgtttaaatatcatttct 32319367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 37690486 - 37690430
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||||  ||||| |||||| ||| |||||||| |||||||||||||    
T  37690486 ataatgtgagtatgagag--agaaaattgtcataaagtgattgtacaaatatcatttct 37690430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 45272163 - 45272219
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||||  |||||||||||| ||| || ||||| |||||||||||||    
T  45272163 ataatgtgagtatgagag--agaaagttgtcaaaaagtggttgtacaaatatcatttct 45272219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 46281526 - 46281471
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||||||||||||| |||| ||||||||||||||  |||||||||||||||||    
T  46281526 aatagagagataaagtaaaaacata-tgtgagtatgagag--agaaagttgtcacaaaa 46281471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 47214298 - 47214243
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| |||||||||||||  ||||||||||||||||||  |||||||||||||||||    
T  47214298 aatagagagataaagtaaaaa-ataatgtgagtatgagag--agaaagttgtcacaaaa 47214243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 47642587 - 47642643
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||| ||||||| || |||||||||||||||||  ||||||||||||||||||    
T  47642587 aatagaaagagaaagtaatatgataatgtgagtatgaga--gagaaagttgtcacaaaa 47642643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 48325781 - 48325837
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||||||   ||||| ||||||||||||| ||||| |||||||||||||    
T  48325781 ataatgtgagtatgagat--agaaaattgtcacaaaatggttgtacaaatatcatttct 48325837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 48858902 - 48858858
Alignment:
Q  13 aagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    ||||||||| |||||||||||||||||  ||||||||||||||||||    
T  48858902 aagtaaaatgataatgtgagtatgaga--gagaaagttgtcacaaaa 48858858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 50882091 - 50882170
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttcttt 83  Q
    |||||| |||||||||||||  ||||||| | ||||||||  ||||| |||||||||||||| |||  |||||||||||||||    
T  50882091 aatagagagataaagtaaaaa-ataatgtaaatatgagag--agaaaattgtcacaaaatgaatgttcaaatatcatttcttt 50882170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 52362572 - 52362517
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| |||||||||||||  ||||||||||||||||||  |||||||||||||||||    
T  52362572 aatagagagataaagtaaaaa-ataatgtgagtatgagag--agaaagttgtcacaaaa 52362517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 36954737 - 36954672
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||| ||||||||||||||||||   |||||||||||| |||||| ||||| |||||||||||||    
T  36954737 aaagtaaaaacataatgtgagtatgaga--aagaaagttgtca-aaaatg-ttgtacaaatatcatttct 36954672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 43757663 - 43757600
Alignment:
Q  16 taaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||| |||||||||||||||| ||  ||||||||||  ||||||| ||||| |||||||||||||    
T  43757663 taaaaacataatgtgagtatgaaag--agaaagttgtatcaaaatggttgtacaaatatcatttct 43757600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 44517953 - 44518020
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||| || ||||||| ||||||||  ||||| |||||||||||||||| || |||||| ||||||    
T  44517953 aaagtaaaaacaaaatgtgaatatgagag--agaaaattgtcacaaaatgattatacaaatatgatttct 44518020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 45065907 - 45065962
Alignment:
Q  26 atgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttcttt 83  Q
    |||||||||||||||  |||||||||||||||||||  |||  |||||||||||||||    
T  45065907 atgtgagtatgagag--agaaagttgtcacaaaatggatgttcaaatatcatttcttt 45065962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 16987028 - 16986975
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaa 57  Q
    |||||| |||||||||||||  |||||||||||||||||  ||||||||||||||||    
T  16987028 aatagaaagataaagtaaaaa-ataatgtgagtatgaga--gagaaagttgtcacaa 16986975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 30596789 - 30596724
Alignment:
Q  16 taaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||| |||||| |||||||||||  |||||||||||  ||||||| ||||| | |||||||||||    
T  30596789 taaaaacataatatgagtatgagaaagagaaagttgtaccaaaatggttgtacatatatcatttct 30596724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 34818025 - 34818103
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| ||| |||||||||  ||||| |||||||||||  ||||||||||| |  |||||| |||| |||||||||||||    
T  34818025 aatagaaagagaaagtaaaaatataatatgagtatgaga--gagaaagttgttaggaaatgaatgtacaaatatcatttct 34818103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 49931642 - 49931588
Alignment:
Q  3 tagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||| |||||||||||||  ||||||||| |||||||  ||||||||||||||||||    
T  49931642 tagagagataaagtaaaaatataatgtgaatatgaga--gagaaagttgtcacaaaa 49931588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 50781551 - 50781628
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| |||||||||||||   |||||||||||||||||  |||||||||||| ||||||  |||  |||||||||||||    
T  50781551 aatagagagataaagtaaaaag-taatgtgagtatgagag--agaaagttgtcataaaatggatgttcaaatatcatttct 50781628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 51038011 - 51037978
Alignment:
Q  48 gttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||| ||||||||||||||||||||||||||    
T  51038011 gttgtcaaaaaatgattgtataaatatcatttct 51037978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 3558883 - 3558847
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||| ||| ||||||||||||||||||||||    
T  3558883 aaagttgtcaaaaattgattgtataaatatcatttct 3558847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 7171218 - 7171272
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| |||||||||||||  |||||||||||||||||  || |||||||||||||||    
T  7171218 aatagagagataaagtaaaa--ataatgtgagtatgaga--gataaagttgtcacaaaa 7171272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 9011682 - 9011646
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  9011682 aaagttgtcacaaaatggttgtacaaatatcatttct 9011646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 19442543 - 19442507
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||||||||  |||||||||||||    
T  19442543 aaagttgtcacaaaatgattgttcaaatatcatttct 19442507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 30536071 - 30536026
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||||||  |||||||||||||||||  ||||||||||||||||||    
T  30536071 aaagtaaaaatataatgtgagtatgaga--gagaaagttgtcacaaaa 30536026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 37685410 - 37685365
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||||||  |||||||||||||||||  ||||||||||||||||||    
T  37685410 aaagtaaaaagataatgtgagtatgaga--gagaaagttgtcacaaaa 37685365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 59
Target Start/End: Original strand, 37700108 - 37700153
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||||||  |||||||||||||||||  ||||||||||||||||||    
T  37700108 aaagtaaaaagataatgtgagtatgaga--gagaaagttgtcacaaaa 37700153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 40238475 - 40238439
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||| |||||||||||| |||||||||||||    
T  40238475 aaagttgtcaaaaaatgattgtacaaatatcatttct 40238439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 42256497 - 42256461
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  42256497 aaagttgtcacaaaatggttgtacaaatatcatttct 42256461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 48872030 - 48872087
Alignment:
Q  22 cataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||| || ||||||  |||||||||||| |||||| ||||| |||||||||||||    
T  48872030 cataatgtgggtgtgagag--agaaagttgtcaaaaaatggttgtacaaatatcatttct 48872087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 48872984 - 48873020
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||| || |||||||||||||||||||    
T  48872984 aaagttgtcacaaagtggttgtataaatatcatttct 48873020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 50528091 - 50528127
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||| |||||||| |||||||||||||    
T  50528091 aaagttgtcacaaattgattgtacaaatatcatttct 50528127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 51436759 - 51436808
Alignment:
Q  8 agataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    ||||||||||||| || |||||||||||||||  || |||||||||||||||    
T  51436759 agataaagtaaaaacaaaatgtgagtatgaga--gataaagttgtcacaaaa 51436808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 51571472 - 51571415
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttctt 82  Q
    ||||||||| ||||||||  |||||||||||| ||| || ||||| ||||||||||||||    
T  51571472 ataatgtgaatatgagag--agaaagttgtcaaaaagtggttgtacaaatatcatttctt 51571415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 52267292 - 52267238
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||||||| |||||  ||||||||||||||||||  |||||||||||||||||    
T  52267292 aatagagagataaaataaaa--ataatgtgagtatgagag--agaaagttgtcacaaaa 52267238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 14710896 - 14710950
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcattt 79  Q
    ||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||    
T  14710896 ataatgtgagtatgagag--agaaagttgtcacaaaatgattgtacaaatatcattt 14710950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 5740766 - 5740844
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| ||| ||||||||| ||||||||||||||||||  || |||||||||| ||| || ||||| |||||||||||||    
T  5740766 aatagagagagaaagtaaaaacataatgtgagtatgaga--gaaaaagttgtcaaaaagtggttgtacaaatatcatttct 5740844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 30439487 - 30439564
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| |||||||||||||  ||||||||||||||||||  |||||||||||||||||||  |||  |||||||||||||    
T  30439487 aatagagagataaagtaaaaa-ataatgtgagtatgagag--agaaagttgtcacaaaatggatgttcaaatatcatttct 30439564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 32020457 - 32020527
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttctttt 84  Q
    ||||||||| ||||||| |||||||||||  |||||||| ||| |||||| ||||| ||||||||||||||||    
T  32020457 aaagtaaaaacataatgcgagtatgagag--agaaagttatcaaaaaatggttgtacaaatatcatttctttt 32020527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 39211132 - 39211054
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| ||| ||||||||| || ||||||||||||||||  |||||||||||| |||||| ||||  |||||||||||||    
T  39211132 aatagagagaaaaagtaaaaacaaaatgtgagtatgagag--agaaagttgtcaaaaaatggttgttcaaatatcatttct 39211054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 157139 - 157070
Alignment:
Q  8 agataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcattt 79  Q
    |||||||||||||  ||||||| ||||||||||  ||||||||||| ||||||| ||||| |||||||||||    
T  157139 agataaagtaaaaatataatgtaagtatgagag--agaaagttgtcgcaaaatggttgtacaaatatcattt 157070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 26000628 - 26000547
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttctttt 84  Q
    |||||| ||||||| ||||| ||||| |||||||||||||  | |||||||||| |||||| ||||| ||||||||||| ||||    
T  26000628 aatagagagataaaataaaaacataacgtgagtatgagag--ataaagttgtcataaaatggttgtaaaaatatcatttttttt 26000547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 37392131 - 37392187
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||||  |||||||||||| |||||| ||||| |||||||||||||    
T  37392131 ataatgtgagtatgagag--agaaagttgtcaaaaaatggttgtacaaatatcatttct 37392187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 40413352 - 40413408
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||| |||||||||||||  |||||||||||||||||| |||||| |||||||||||||    
T  40413352 ataacgtgagtatgagag--agaaagttgtcacaaaataattgtacaaatatcatttct 40413408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 83
Target Start/End: Complemental strand, 6806945 - 6806907
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttcttt 83  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  6806945 aaagttgtcacaaaatgattgtacaaatatcatttcttt 6806907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 6849295 - 6849331
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||| |||||||||||||||||||    
T  6849295 aaagttgtcacaaaatggttgtataaatatcatttct 6849331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 7010739 - 7010686
Alignment:
Q  26 atgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||||  ||||| |||||| |||||||||||| |||||||||||||    
T  7010739 atgtgagtatgagag--agaaaattgtcaaaaaatgattgtacaaatatcatttct 7010686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 12898910 - 12898967
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaat 60  Q
    |||||| |||||||||||||  |||||||||||||||||  || ||||||||||||||||    
T  12898910 aatagagagataaagtaaaaagataatgtgagtatgaga--gaaaaagttgtcacaaaat 12898967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 36064067 - 36064031
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||||||||| |||||||||||||    
T  36064067 aaagttgtcacaaaatgattgtacaaatatcatttct 36064031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 44061797 - 44061752
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||||||| |||||||||||||||||  ||||||||||||||||||    
T  44061797 aaagtaaaatgataatgtgagtatgaga--gagaaagttgtcacaaaa 44061752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 5502428 - 5502372
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||| ||||||||  |||||||||||||||| || ||||| |||||||||||||    
T  5502428 ataatgtgaatatgagag--agaaagttgtcacaaagtggttgtacaaatatcatttct 5502372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 6243102 - 6243046
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||||  ||||||||||   |||||||||||| |||||||||||||    
T  6243102 ataatgtgagtatgagag--agaaagttgtacaaaaatgattgtacaaatatcatttct 6243046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 25830226 - 25830282
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||| |||||||||  |||||||||||||||||  ||||||||||||||||||    
T  25830226 aatagagagagaaagtaaaaatataatgtgagtatgaga--gagaaagttgtcacaaaa 25830282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 25987767 - 25987823
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| |||||||||| ||| |||||||||||||||||  || |||||||||||||||    
T  25987767 aatagagagataaagtagaatgataatgtgagtatgaga--gataaagttgtcacaaaa 25987823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 35067251 - 35067195
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||| |||||||||  |||||||||||||||||  ||||||||||||||||||    
T  35067251 aatagagagagaaagtaaaaatataatgtgagtatgaga--gagaaagttgtcacaaaa 35067195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 37524431 - 37524487
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||| |||  |||||||||||||||| || ||||| |||||||||||||    
T  37524431 ataatgtgagtatgtgag--agaaagttgtcacaaagtgcttgtacaaatatcatttct 37524487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 84
Target Start/End: Original strand, 39719282 - 39719321
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttctttt 84  Q
    |||||||||||||| |||||||| ||||||||||||||||    
T  39719282 aaagttgtcacaaattgattgtacaaatatcatttctttt 39719321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 41159870 - 41159925
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| |||||||||||||  |||||||||||||||||  ||||||||||||||||||    
T  41159870 aatagagagataaagtaaaaa-ataatgtgagtatgaga--gagaaagttgtcacaaaa 41159925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 43715965 - 43715909
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||| |||||||||  |||||||||||||||||  ||||||||||||||||||    
T  43715965 aatagagagagaaagtaaaaatataatgtgagtatgaga--gagaaagttgtcacaaaa 43715909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 45405815 - 45405878
Alignment:
Q  16 taaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||| ||||||||||||||||||  || ||||||||  ||||||| ||||| |||||||||||||    
T  45405815 taaaaacataatgtgagtatgaga--gaaaaagttgtatcaaaatggttgtacaaatatcatttct 45405878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 1796551 - 1796497
Alignment:
Q  25 aatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||||   |||||||||||||||| || ||||| |||||||||||||    
T  1796551 aatgtgagtatgagaa--agaaagttgtcacaaagtggttgtacaaatatcatttct 1796497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 24319376 - 24319339
Alignment:
Q  46 aagttgtcacaaaatgattgtataaatatcatttcttt 83  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  24319376 aagttgtcacaaaatgattgtacaaatatcattacttt 24319339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 34873927 - 34873849
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| ||| |||||||||  ||||||| |||||||||   | |||||||||||||||| |||||  |||||||||||||    
T  34873927 aatagagagagaaagtaaaaaaataatgttagtatgagaa--ataaagttgtcacaaaataattgttaaaatatcatttct 34873849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 41541947 - 41541870
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| ||||||| |||||  ||||||||||||| ||||  |||||||||||||||||||  |||  |||||||||||||    
T  41541947 aatagagagataaaataaaaa-ataatgtgagtataagag--agaaagttgtcacaaaatggatgttcaaatatcatttct 41541870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 83
Target Start/End: Complemental strand, 44607741 - 44607700
Alignment:
Q  42 gagaaagttgtcacaaaatgattgtataaatatcatttcttt 83  Q
    |||||||||||||| ||||| ||||| |||||||||||||||    
T  44607741 gagaaagttgtcaccaaatggttgtacaaatatcatttcttt 44607700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 2733077 - 2733023
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| |||||||||||||  |||||||||||||||||  || |||||||||||||||    
T  2733077 aatagagagataaagtaaaa--ataatgtgagtatgaga--gaaaaagttgtcacaaaa 2733023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 6440161 - 6440116
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||||||  |||||||||||||||||  ||||||||||||||||||    
T  6440161 aaagtaaaaatataatgtgagtatgaga--gagaaagttgtcacaaaa 6440116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 79
Target Start/End: Complemental strand, 6877618 - 6877586
Alignment:
Q  47 agttgtcacaaaatgattgtataaatatcattt 79  Q
    |||||||||||||||| ||||||||||||||||    
T  6877618 agttgtcacaaaatgaatgtataaatatcattt 6877586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 7598788 - 7598743
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    ||||||||| ||||||||||||||||||  |||||||| |||||||||    
T  7598788 aaagtaaaaacataatgtgagtatgaga--gagaaagtggtcacaaaa 7598743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 84
Target Start/End: Complemental strand, 11138958 - 11138905
Alignment:
Q  29 tgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttctttt 84  Q
    ||||||||||||  ||||||||||||||||||  ||||| ||||||||||| ||||    
T  11138958 tgagtatgagag--agaaagttgtcacaaaatagttgtacaaatatcatttttttt 11138905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 13884194 - 13884230
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||| |||||||||||| |||||||||||||    
T  13884194 aaagttgtcaaaaaatgattgtacaaatatcatttct 13884230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 17775463 - 17775499
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||||||||  |||||||||||||    
T  17775463 aaagttgtcacaaaatgattgttcaaatatcatttct 17775499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 38844824 - 38844860
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  38844824 aaagttgtcacaaaatggttgtacaaatatcatttct 38844860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 42443141 - 42443105
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||| ||||||||||| |||||||||||||    
T  42443141 aaagttgtcactaaatgattgtacaaatatcatttct 42443105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 59
Target Start/End: Original strand, 43285954 - 43285999
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||||||  |||||||||||||||||  ||||||||||||||||||    
T  43285954 aaagtaaaaatataatgtgagtatgaga--gagaaagttgtcacaaaa 43285999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 7817726 - 7817647
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttctttt 84  Q
    |||||| |||||||||||||  ||||||||||||||||||  |||||||||||||||||||  |||  ||||||||||||||||    
T  7817726 aatagagagataaagtaaaa--ataatgtgagtatgagag--agaaagttgtcacaaaatggatgttcaaatatcatttctttt 7817647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 41985103 - 41985159
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||||  |||||||||||||||| |||||||| |||||||||||||    
T  41985103 ataatgtgagtatgagag--agaaagttgtcacaaattgattgtacaaatatcatttct 41985159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 36352565 - 36352623
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| |||||||||||||  ||||||| |||||||||| ||||||||||||||||||    
T  36352565 aatagagagataaagtaaaaatataatgtaagtatgagagagagaaagttgtcacaaaa 36352623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 237096 - 237026
Alignment:
Q  8 agataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttc 80  Q
    |||| ||||||||  ||||||||||||||||||  | |||||||||||||| |||||||| ||||||||||||    
T  237096 agattaagtaaaagtataatgtgagtatgagag--ataaagttgtcacaaattgattgtacaaatatcatttc 237026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 22330634 - 22330690
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||||  |||||||||||||||| || ||||| |||||||||||||    
T  22330634 ataatgtgagtatgagag--agaaagttgtcacaaagtggttgtacaaatatcatttct 22330690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 37351993 - 37352049
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||||  |||||||||||||||| || ||||| |||||||||||||    
T  37351993 ataatgtgagtatgagag--agaaagttgtcacaaagtggttgtacaaatatcatttct 37352049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 42584893 - 42584837
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| |||||||||||||  |||||||||||||||||  ||||||||||||||||||    
T  42584893 aatagagagataaagtaaaaatataatgtgagtatgaga--gagaaagttgtcacaaaa 42584837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 3937109 - 3937180
Alignment:
Q  8 agataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||  |||||||||||||||||  |||||||||||||||||||   |||  |||||||||||||    
T  3937109 agataaagtaaaaagataatgtgagtatgaga--gagaaagttgtcacaaaatagatgttcaaatatcatttct 3937180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 36990109 - 36990058
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatca 76  Q
    ||||||||||||||||||  |||||||||||| ||||| |||||||||||||||    
T  36990109 ataatgtgagtatgagag--agaaagttgtcataaaattattgtataaatatca 36990058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 2469758 - 2469704
Alignment:
Q  25 aatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||  |||||||||||||||| || ||||| |||||||||||||    
T  2469758 aatgtgagtatgagag--agaaagttgtcacaaagtggttgtacaaatatcatttct 2469704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 45420041 - 45420119
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| ||| |||||||||| ||||||||| ||||||||  |||||||||||| |||||  ||||  |||||||||||||    
T  45420041 aatagagagagaaagtaaaatgataatgtgaatatgagag--agaaagttgtcaaaaaatagttgttcaaatatcatttct 45420119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 81
Target Start/End: Original strand, 32919018 - 32919050
Alignment:
Q  49 ttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||||||||||||||||||||||    
T  32919018 ttgtcacaaaatgattgtataaatatcatttct 32919050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 34654604 - 34654568
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||| ||||||||||||||||||||||||||||||||    
T  34654604 aaagatgtcacaaaatgattgtataaatatcatttct 34654568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 41080163 - 41080127
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||||||||| |||||||||||||    
T  41080163 aaagttgtcacaaaatgattgtacaaatatcatttct 41080127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 41227104 - 41227068
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||||| ||||||||||||||||||||    
T  41227104 aaagttgtcacaaaataattgtataaatatcatttct 41227068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 1471272 - 1471327
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||||||||||||| |||| ||||||||||||||  |||||||||||||||||    
T  1471272 aatagagagataaagtaaaaacata-tgtgagtatgagag--agaaagttgtcacaaaa 1471327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 13152683 - 13152627
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||| |||||||||  |||||||||||||||||  ||||||||||||||||||    
T  13152683 aatagagagagaaagtaaaaggataatgtgagtatgaga--gagaaagttgtcacaaaa 13152627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 18111592 - 18111648
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| |||||||||||||  |||||||||||||||||  |||||| |||||||||||    
T  18111592 aatagagagataaagtaaaaatataatgtgagtatgaga--gagaaaattgtcacaaaa 18111648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 23680019 - 23680095
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcattt 79  Q
    |||||| ||| ||||||||| ||||||||| |||||| |   ||||||||||||||||||  ||||| |||||||||||    
T  23680019 aatagagagacaaagtaaaaacataatgtgtgtatgaaaa--agaaagttgtcacaaaatagttgtacaaatatcattt 23680095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 34978387 - 34978331
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||| |||||||||  |||||||||||||||||  ||||||||||||||||||    
T  34978387 aatagagagagaaagtaaaaggataatgtgagtatgaga--gagaaagttgtcacaaaa 34978331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 37856168 - 37856224
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||| |||  | ||||||||||||||||| ||||| |||||||||||||    
T  37856168 ataatgtgagtatgtgag--ataaagttgtcacaaaatggttgtacaaatatcatttct 37856224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 38340363 - 38340419
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||| ||||||||| ||||||||||||||||||  || |||||||||||||||    
T  38340363 aatagagagaaaaagtaaaaacataatgtgagtatgaga--gataaagttgtcacaaaa 38340419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 41430132 - 41430188
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| |||||||||||||  ||||||||||||| |||  ||||||||||||||||||    
T  41430132 aatagagagataaagtaaaaatataatgtgagtataaga--gagaaagttgtcacaaaa 41430188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 46725688 - 46725617
Alignment:
Q  8 agataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttctt 82  Q
    ||||||||||||| ||| |||  ||||||||||  | ||||||||||||||||  ||||||||||||||||||||    
T  46725688 agataaagtaaaa-catgatggaagtatgagag--aaaaagttgtcacaaaatagttgtataaatatcatttctt 46725617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 46829569 - 46829514
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||||||||||||| |||| ||||||||||||||  |||||||||||||||||    
T  46829569 aatagagagataaagtaaaaacata-tgtgagtatgagag--agaaagttgtcacaaaa 46829514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 3062420 - 3062342
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttctt 82  Q
    |||||| |||||||||||||   |||||||||||| ||||  |||||||||||||||||||  |||  ||||||||||||||    
T  3062420 aatagagagataaagtaaaaag-taatgtgagtataagag--agaaagttgtcacaaaatggatgttcaaatatcatttctt 3062342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 5905969 - 5906024
Alignment:
Q  24 taatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||||||  |||||||| |  ||||||||||||| |||||||||||||    
T  5905969 taatgtgagtatgagag--agaaagttataccaaaatgattgtacaaatatcatttct 5906024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 22817029 - 22816950
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttctt 82  Q
    |||||| ||| |||||||||  ||||||||||| |||||   | ||||||||||||||||| ||||  ||||||||||||||    
T  22817029 aatagagagagaaagtaaaaaaataatgtgagtgtgagaa--ataaagttgtcacaaaatggttgtcaaaatatcatttctt 22816950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 25887658 - 25887595
Alignment:
Q  16 taaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||| |||| ||||||||||||||  |||||||||||||||| ||  |||| |||||||||||||    
T  25887658 taaaaacatattgtgagtatgagag--agaaagttgtcacaaagtggatgtacaaatatcatttct 25887595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 34264658 - 34264595
Alignment:
Q  16 taaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||| |||||||||||||| |||| ||  |||||||||||||||| | ||| |||||||||||||    
T  34264658 taaaaacataatgtgagtataagagcga--aagttgtcacaaaatggtcgtacaaatatcatttct 34264595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 3293219 - 3293142
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| |||||||||||||  || |||||| ||||||||  ||||||||||||| |||||| |||  |||||||||||||    
T  3293219 aatagagagataaagtaaaaa-attatgtgaatatgagag--agaaagttgtcaccaaatgaatgttcaaatatcatttct 3293142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 21839136 - 21839190
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcattt 79  Q
    ||||||||||||||||||  | |||||||||| ||| || |||||||||||||||||    
T  21839136 ataatgtgagtatgagag--ataaagttgtcaaaaagtggttgtataaatatcattt 21839190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 39029949 - 39029895
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||||||| ||||| ||||||||||||||||    ||||||||||||||||||    
T  39029949 aatagagagataaattaaaaacataatgtgagtatga----gagaaagttgtcacaaaa 39029895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 47078232 - 47078309
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| |||||||||||||  |||||||||||||||||  ||||||||||||| |||||   |||  |||||||||||||    
T  47078232 aatagagagataaagtaaaaa-ataatgtgagtatgaga--gagaaagttgtcataaaatagatgttcaaatatcatttct 47078309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 2323358 - 2323305
Alignment:
Q  26 atgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||||  |||||||||||| |||||  ||||| |||||||||||||    
T  2323358 atgtgagtatgagag--agaaagttgtcataaaattgttgtacaaatatcatttct 2323305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 2347093 - 2347129
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  2347093 aaagttgtcacaaaatggttgtacaaatatcatttct 2347129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 4292518 - 4292463
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||| ||||||||| ||||||||||||||||||| |   ||||||||||||||    
T  4292518 aatagagagagaaagtaaaaacataatgtgagtatgagagag---aagttgtcacaaaa 4292463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 4971327 - 4971291
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  4971327 aaagttgtcacaaaatggttgtacaaatatcatttct 4971291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 19426617 - 19426581
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  19426617 aaagttgtcacaaaatggttgtacaaatatcatttct 19426581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 24044753 - 24044806
Alignment:
Q  26 atgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||| || ||||  ||||||||||||| |||||| |||||||||||||    
T  24044753 atgtgagtatgaaagagaga--gttgtcacaaaataattgtacaaatatcatttct 24044806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 24700158 - 24700122
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||| |||||||||||||| |||||||||||||    
T  24700158 aaagttgttacaaaatgattgtacaaatatcatttct 24700122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 27164871 - 27164907
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||| |||||||| |||||||||||||    
T  27164871 aaagttgtcacaaattgattgtacaaatatcatttct 27164907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 29162313 - 29162349
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||| |||||||| |||||||||||||    
T  29162313 aaagttgtcacaaattgattgtacaaatatcatttct 29162349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 30941465 - 30941420
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||||||  |||||||||||||||||  ||||||||||||||||||    
T  30941465 aaagtaaaaagataatgtgagtatgaga--gagaaagttgtcacaaaa 30941420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 33050220 - 33050184
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  33050220 aaagttgtcacaaaatggttgtacaaatatcatttct 33050184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 81
Target Start/End: Original strand, 38218378 - 38218410
Alignment:
Q  49 ttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||||| |||||||||||||    
T  38218378 ttgtcacaaaatgattgtacaaatatcatttct 38218410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 38547293 - 38547350
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttctt 82  Q
    |||||||||||||||||   |||||||||||| |||||  ||||| ||||||||||||||    
T  38547293 ataatgtgagtatgagaa--agaaagttgtcaaaaaatagttgtacaaatatcatttctt 38547350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 47448906 - 47448861
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    ||||||||| || |||||||||||||||  ||||||||||||||||||    
T  47448906 aaagtaaaaacacaatgtgagtatgaga--gagaaagttgtcacaaaa 47448861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 47530325 - 47530361
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||| |||||| |||||||||||||||||||    
T  47530325 aaagttgtcataaaatggttgtataaatatcatttct 47530361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 49025334 - 49025374
Alignment:
Q  42 gagaaagttgtcacaaaatgattgtataaatatcatttctt 82  Q
    ||||||||||||| ||||| |||||| ||||||||||||||    
T  49025334 gagaaagttgtcataaaataattgtacaaatatcatttctt 49025374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 49128760 - 49128724
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||| |||||||| |||||||||||||||||||    
T  49128760 aaagttgttacaaaatggttgtataaatatcatttct 49128724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 42490999 - 42490921
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| ||| ||||||||| ||||||||||||||||||  ||||||||||||| ||| || ||||| |||||||||||||    
T  42490999 aatagagagagaaagtaaaaacataatgtgagtatgaga--gagaaagttgtcaaaaagtggttgtacaaatatcatttct 42490921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 37731990 - 37731927
Alignment:
Q  16 taaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||| |||||||||||||||||||  ||||||||||  ||||||||||||| |||||||||||||    
T  37731990 taaaaacataatgtgagtatgagag--agaaagttgtaccaaaatgattgtacaaatatcatttct 37731927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 5386463 - 5386385
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| ||| |||||||||  ||||||||||||||||||  |||||||||||| |||||| ||||  |||||||||||||    
T  5386463 aatagagagagaaagtaaaagaataatgtgagtatgagag--agaaagttgtcaaaaaatggttgttcaaatatcatttct 5386385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 28657422 - 28657499
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| |||||||||||||  ||||||||||||||||||  |||||||||||||||||||  |||  |||||||||||||    
T  28657422 aatagagagataaagtaaaaa-ataatgtgagtatgagag--agaaagttgtcacaaaatggatgttcaaatatcatttct 28657499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 1627550 - 1627610
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatat 74  Q
    ||||||||| ||||||| |||||||||||  |||||||||||| |||||||||||| ||||||    
T  1627550 aaagtaaaaacataatgcgagtatgagag--agaaagttgtcaaaaaatgattgtacaaatat 1627610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 28676155 - 28676211
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||| ||  ||||||||||||||||||| ||||| |||||||||||||    
T  28676155 ataatgtgagtatgaaag--agaaagttgtcacaaaatggttgtacaaatatcatttct 28676211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 39241304 - 39241360
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||||  |||||||||||||||| || ||||| |||||||||||||    
T  39241304 ataatgtgagtatgagag--agaaagttgtcacaaattggttgtacaaatatcatttct 39241360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 2109511 - 2109444
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||| |||||||||||||||| ||  |||||||||||| || ||| ||||| |||||||||||||    
T  2109511 aaagtaaaaacataatgtgagtatgaaag--agaaagttgtcaaaagatggttgtacaaatatcatttct 2109444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 5249959 - 5249904
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaa 58  Q
    |||||| ||| ||||||||| ||||||||||||||||||  |||||||||||||||||    
T  5249959 aatagagagagaaagtaaaaacataatgtgagtatgaga--gagaaagttgtcacaaa 5249904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 12387657 - 12387724
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||  ||||||||| |||||   |||||||||||||| |||||||||||| |||||||||||||    
T  12387657 aaagtaaaaatataatgtgattatgaa--ggagaaagttgtcaaaaaatgattgtacaaatatcatttct 12387724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 43769794 - 43769724
Alignment:
Q  8 agataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||  ||||||||||||||||||  |||||||||||||||||||  |||  |||||||||||||    
T  43769794 agataaagtaaaaa-ataatgtgagtatgagag--agaaagttgtcacaaaatggatgttcaaatatcatttct 43769724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 46686308 - 46686246
Alignment:
Q  16 taaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||| ||||||||||||||||||  ||||||||||| |||||||| ||||| |||||||||||||    
T  46686308 taaaaacataatgtgagtatgaga--gagaaagttgt-acaaaatggttgtacaaatatcatttct 46686246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 50980670 - 50980603
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||  ||||||||||||||||||  |||| ||||| | |||||||||||| |||||||||||||    
T  50980670 aaagtaaaaatataatgtgagtatgagag--agaaggttgttagaaaatgattgtacaaatatcatttct 50980603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 80
Target Start/End: Complemental strand, 17367156 - 17367091
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttc 80  Q
    ||||||||| ||||||| |||||| ||||  |||||||||||||||||||| |||| ||||||||||||    
T  17367156 aaagtaaaaacataatgcgagtataagag--agaaagttgtcacaaaatga-tgtacaaatatcatttc 17367091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 31657736 - 31657659
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| |||||||||||||   |||||||||||||||||  |||||||||||||||||||  |||  |||||||||||||    
T  31657736 aatagagagataaagtaaaaag-taatgtgagtatgagag--agaaagttgtcacaaaatggatgttcaaatatcatttct 31657659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 45143659 - 45143731
Alignment:
Q  8 agataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||  ||||||||| |||||||| ||||||||||||| ||||||  |||  |||||||||||||    
T  45143659 agataaagtaaaaa-ataatgtgattatgagagagagaaagttgtcataaaatggatgttcaaatatcatttct 45143731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 45152428 - 45152500
Alignment:
Q  8 agataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||  ||||||||| |||||||| ||||||||||||| ||||||  |||  |||||||||||||    
T  45152428 agataaagtaaaaa-ataatgtgattatgagagagagaaagttgtcataaaatggatgttcaaatatcatttct 45152500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 51359800 - 51359860
Alignment:
Q  23 ataatgtgagtatgagagggag--aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||||||| ||   ||||||||||||||||| ||||| |||||||||||||    
T  51359800 ataatgtgagtatgagagagaacaaaagttgtcacaaaatggttgtacaaatatcatttct 51359860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 8026787 - 8026823
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||| ||||||||||||||||||||||    
T  8026787 aaagttgtcacaaattgattgtataaatatcatttct 8026823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 9162103 - 9162067
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||||||||| |||||||||||||    
T  9162103 aaagttgtcacaaaatgattgtacaaatatcatttct 9162067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 18568849 - 18568885
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||| |||||||||||||||||||    
T  18568849 aaagttgtcacaaaatggttgtataaatatcatttct 18568885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 22072328 - 22072263
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcattt 79  Q
    ||||||||| || ||||||||||||||||  | |||||||| |||||||||||||  |||||||||||    
T  22072328 aaagtaaaaacacaatgtgagtatgagag--aaaaagttgtaacaaaatgattgttcaaatatcattt 22072263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 32365673 - 32365726
Alignment:
Q  26 atgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| ||||||||  ||||||||||||||||||| ||||| |||||||||||||    
T  32365673 atgtgaatatgagag--agaaagttgtcacaaaatggttgtacaaatatcatttct 32365726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 2268488 - 2268544
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||| |||||||||  |||||||||||||||||  ||||||||||||||||||    
T  2268488 aatagaaagaaaaagtaaaaagataatgtgagtatgaga--gagaaagttgtcacaaaa 2268544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 4511882 - 4511826
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||||  |||||||||||| |||||| || || |||||||||||||    
T  4511882 ataatgtgagtatgagag--agaaagttgtcataaaatggttatacaaatatcatttct 4511826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 4949588 - 4949519
Alignment:
Q  8 agataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||  || |||||||||||||||  ||||||||||||| |||||| |||  |||||||||||||    
T  4949588 agataaagtaaaa--atgatgtgagtatgagag--agaaagttgtcaccaaatgaatgttcaaatatcatttct 4949519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 5234474 - 5234530
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||| ||||||||||||  |||||||| ||||||| |||||||| |||||||||||||    
T  5234474 ataatatgagtatgagag--agaaagttatcacaaagtgattgtacaaatatcatttct 5234530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 10250496 - 10250552
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||| |||||||||  |||||||||||||||||  ||||||||||||||||||    
T  10250496 aatagagagagaaagtaaaaagataatgtgagtatgaga--gagaaagttgtcacaaaa 10250552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 23369313 - 23369369
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| |||||||||||||  ||||||||||||  |||| ||||||||||||||||||    
T  23369313 aatagagagataaagtaaaaagataatgtgagta--agagagagaaagttgtcacaaaa 23369369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 28458358 - 28458413
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| |||||||||||||  |||||||||||||||||  ||||||||||||||||||    
T  28458358 aatagagagataaagtaaaaa-ataatgtgagtatgaga--gagaaagttgtcacaaaa 28458413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 28899218 - 28899274
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||| ||||||||  ||||||||||  ||||||||||||| |||||||||||||    
T  28899218 ataatgtgaatatgagag--agaaagttgtaccaaaatgattgtacaaatatcatttct 28899274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 30170001 - 30170056
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| |||||||||||||  |||||||||||||||||  ||||||||||||||||||    
T  30170001 aatagagagataaagtaaaaa-ataatgtgagtatgaga--gagaaagttgtcacaaaa 30170056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 30778267 - 30778323
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||||  |||||||||||||||| ||  |||| |||||||||||||    
T  30778267 ataatgtgagtatgagag--agaaagttgtcacaaattggctgtacaaatatcatttct 30778323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 37514113 - 37514168
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||||||||||||| |||| ||||||||||||||  |||||||||||||||||    
T  37514113 aatagagagataaagtaaaaacata-tgtgagtatgagag--agaaagttgtcacaaaa 37514168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 81
Target Start/End: Original strand, 41262649 - 41262688
Alignment:
Q  42 gagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||||| |||||| |||||||||||||    
T  41262649 gagaaagttgtcacaaaataattgtacaaatatcatttct 41262688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 42815494 - 42815439
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||||||||||||| |||| ||||||||||||||  |||||||||||||||||    
T  42815494 aatagagagataaagtaaaaacata-tgtgagtatgagag--agaaagttgtcacaaaa 42815439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 44257710 - 44257766
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||| |||||||||  |||||||||||||||||  ||||||||||||||||||    
T  44257710 aatagagagagaaagtaaaaatataatgtgagtatgaga--gagaaagttgtcacaaaa 44257766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 46173607 - 46173551
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||| |||||  |||||||||||||||| || ||||| |||||||||||||    
T  46173607 ataatgtgagtacgagag--agaaagttgtcacaaagtggttgtacaaatatcatttct 46173551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 51577705 - 51577649
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||| |||||||||| ||||| |||||||||||  ||||||||||||||||||    
T  51577705 aatagagagagaaagtaaaatgataatatgagtatgaga--gagaaagttgtcacaaaa 51577649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 51986132 - 51986076
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||||||| |||||||||  |||||||||||||||||  ||||||||||||| ||||    
T  51986132 aatagatagagaaagtaaaaagataatgtgagtatgaga--gagaaagttgtcataaaa 51986076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 54036532 - 54036588
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||| ||||||||||||  | ||||||||||||||||| ||||| |||||||||||||    
T  54036532 ataatttgagtatgagag--ataaagttgtcacaaaatggttgtacaaatatcatttct 54036588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 79
Target Start/End: Original strand, 925096 - 925130
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcattt 79  Q
    ||||||||||||||||| |||||||||||||||||    
T  925096 aaagttgtcacaaaatggttgtataaatatcattt 925130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 40590651 - 40590613
Alignment:
Q  43 agaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  40590651 agaaagttgtcacaaaataattgtttaaatatcatttct 40590613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 17683314 - 17683237
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| |||||||||||||   |||||||||||| ||||  |||||||||||| ||||||| |||  |||||||||||||    
T  17683314 aatagagagataaagtaaaaag-taatgtgagtataagag--agaaagttgtcataaaatgaatgttcaaatatcatttct 17683237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 29891935 - 29891865
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaata 73  Q
    |||||| ||| ||| ||||| ||||||||||||||||||  ||||||||||||| ||||| ||| || |||||    
T  29891935 aatagaaagagaaactaaaaacataatgtgagtatgaga--gagaaagttgtcaaaaaataattatacaaata 29891865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 32621693 - 32621639
Alignment:
Q  25 aatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||| ||||  ||||||||||||||||||| ||||  |||||||||||||    
T  32621693 aatgtgagtattagag--agaaagttgtcacaaaatggttgtgcaaatatcatttct 32621639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 48326609 - 48326555
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcattt 79  Q
    ||||||||||||||||||  | |||||||||||||| || ||||| |||||||||||    
T  48326609 ataatgtgagtatgagag--aaaaagttgtcacaaagtggttgtacaaatatcattt 48326555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 84
Target Start/End: Original strand, 52846230 - 52846288
Alignment:
Q  24 taatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttctttt 84  Q
    |||||||||||||||||  |||||||||||| |||||   ||| |||||||||||||||||    
T  52846230 taatgtgagtatgagag--agaaagttgtcataaaatagatgtttaaatatcatttctttt 52846288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 169536 - 169572
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  169536 aaagttgtcacaaaatggttgtacaaatatcatttct 169572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 3078942 - 3078978
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||| |||||||||||||| |||||||||||||    
T  3078942 aaagttgttacaaaatgattgtacaaatatcatttct 3078978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 3223026 - 3222990
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||| |||||||| |||||||||||||    
T  3223026 aaagttgtcacaaattgattgtacaaatatcatttct 3222990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 59
Target Start/End: Original strand, 6520823 - 6520868
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    ||||||||| ||||||||||||||||||  ||||||||||| ||||||    
T  6520823 aaagtaaaaacataatgtgagtatgaga--gagaaagttgttacaaaa 6520868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 9032817 - 9032781
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||| |||||||| |||||||||||||    
T  9032817 aaagttgtcacaaattgattgtacaaatatcatttct 9032781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 15638198 - 15638162
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||| |||||||||||| |||||||||||||    
T  15638198 aaagttgtcaaaaaatgattgtacaaatatcatttct 15638162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 23094413 - 23094377
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| |||||||||||||||| |||||||||||||    
T  23094413 aaagttatcacaaaatgattgtacaaatatcatttct 23094377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 31221450 - 31221414
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||| |||||||| |||||||||||||    
T  31221450 aaagttgtcacaaattgattgtacaaatatcatttct 31221414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 33860736 - 33860682
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| |||||||||||||  || |||||||||||||||  |||||||||||||||||    
T  33860736 aatagagagataaagtaaaa--atgatgtgagtatgagag--agaaagttgtcacaaaa 33860682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 38864770 - 38864806
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||||| |||||| |||||||||||||    
T  38864770 aaagttgtcacaaaataattgtacaaatatcatttct 38864806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 39010171 - 39010207
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  39010171 aaagttgtcacaaaatggttgtacaaatatcatttct 39010207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 44368236 - 44368272
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||| |||||||| |||||||||||||    
T  44368236 aaagttgtcacaaattgattgtacaaatatcatttct 44368272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 48099848 - 48099812
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||| || |||||||||||||||||||    
T  48099848 aaagttgtcacaaagtggttgtataaatatcatttct 48099812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 54000789 - 54000740
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgt 52  Q
    |||||| ||| |||||||||| |||||||||||||||||  |||||||||||    
T  54000789 aatagagagagaaagtaaaatgataatgtgagtatgaga--gagaaagttgt 54000740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 55601682 - 55601738
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaat 60  Q
    |||||| ||||| |||||||| |||||||||||||||||  ||||||||||||| |||||    
T  55601682 aatagagagatatagtaaaat-ataatgtgagtatgaga--gagaaagttgtcataaaat 55601738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 14891070 - 14891148
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| |||||||||||||||||||||||| |||||||   |||||||| |||||||||  ||||| |||||||||||||    
T  14891070 aatagaaagataaagtaaaatcataatgtgaatatgaga--aagaaagttatcacaaaatagttgtacaaatatcatttct 14891148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 22353177 - 22353234
Alignment:
Q  22 cataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| |||||||||||||    
T  22353177 cataatgtgagtatgagaa--agaaagttgtcacaaaatgattgtacaaatatcatttct 22353234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 29795504 - 29795448
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||| |||  ||||||||||||||||||| ||||| |||||||||||||    
T  29795504 ataatgtgagtatgtgag--agaaagttgtcacaaaatggttgtacaaatatcatttct 29795448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 24727490 - 24727427
Alignment:
Q  16 taaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||| |||||||||||||||||||  ||||||||||  ||||||| ||||| |||||||||||||    
T  24727490 taaaaacataatgtgagtatgagag--agaaagttgtaccaaaatggttgtacaaatatcatttct 24727427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 80
Target Start/End: Original strand, 33417236 - 33417274
Alignment:
Q  42 gagaaagttgtcacaaaatgattgtataaatatcatttc 80  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  33417236 gagagagttgtcacaaaatgattgtataaatatcatttc 33417274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 44105122 - 44105164
Alignment:
Q  42 gagaaagttgtcacaaaatgattgtataaatatcatttctttt 84  Q
    |||||| |||||||||||||||||||||||||| |||||||||    
T  44105122 gagaaaattgtcacaaaatgattgtataaatataatttctttt 44105164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 7121453 - 7121391
Alignment:
Q  17 aaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||| |||||||||||||||||||  |||||||||| |||||||| || || |||||||||||||    
T  7121453 aaaaacataatgtgagtatgagag--agaaagttgttacaaaatggttatacaaatatcatttct 7121391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 17264071 - 17264133
Alignment:
Q  16 taaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttc 80  Q
    |||||||||||| |||||||||||   |||||||||||| |||||| || |||||||||||||||    
T  17264071 taaaatcataatatgagtatgagaa--agaaagttgtcataaaatggttatataaatatcatttc 17264133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 40700286 - 40700208
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| |||||||||||||  |||||||||||||||||  ||||||||||| | |||||  ||||| ||||| |||||||    
T  40700286 aatagagagataaagtaaaaatataatgtgagtatgaga--gagaaagttgttataaaatagttgtacaaataccatttct 40700208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 42678839 - 42678762
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| |||||||||||||  ||||||||||||||||||  ||||||||||||| |||||  |||  |||||||||||||    
T  42678839 aatagagagataaagtaaaaa-ataatgtgagtatgagag--agaaagttgtcactaaatggatgttcaaatatcatttct 42678762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 25086404 - 25086336
Alignment:
Q  8 agataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||| |||||||||||||||||||    |||||||||| |||||  ||||| |||||||||||||    
T  25086404 agataaagtaaaa-cataatgtgagtatgagag----aaagttgtcataaaattgttgtacaaatatcatttct 25086336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 42372570 - 42372513
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaat 60  Q
    |||||| |||||||||||||  |||||||||||||||||  |||||||||||||| ||||    
T  42372570 aatagagagataaagtaaaaaaataatgtgagtatgaga--gagaaagttgtcactaaat 42372513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 42607536 - 42607589
Alignment:
Q  26 atgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||||  ||||| |||||||||||| |||||| |||||||||||||    
T  42607536 atgtgagtatgagag--agaaaattgtcacaaaataattgtacaaatatcatttct 42607589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 9207680 - 9207624
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||| |||||||||  |||||||||||||||||  ||||||||||||||||||    
T  9207680 aatagagagagaaagtaaaaaaataatgtgagtatgaga--gagaaagttgtcacaaaa 9207624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 9760108 - 9760052
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||| |||||||||  |||||||||||||||||  ||||||||||||||||||    
T  9760108 aatagagagagaaagtaaaaagataatgtgagtatgaga--gagaaagttgtcacaaaa 9760052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 18254190 - 18254246
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||| |||||||||  |||||||||||||||||  ||||||||||||||||||    
T  18254190 aatagagagagaaagtaaaaagataatgtgagtatgaga--gagaaagttgtcacaaaa 18254246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 25801816 - 25801872
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||||  | |||||||||||||| || ||||| |||||||||||||    
T  25801816 ataatgtgagtatgagag--ataaagttgtcacaaattggttgtacaaatatcatttct 25801872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 28245818 - 28245763
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| |||||||||||||  ||||||||||||||||||  |||||||||||||||||    
T  28245818 aatagagagataaagtaaaaa-ataatgtgagtatgagag--agaaagttgtcacaaaa 28245763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 31578525 - 31578469
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| |||||||||||||  |||||||||||||||||  || |||||||||||||||    
T  31578525 aatagagagataaagtaaaagaataatgtgagtatgaga--gaaaaagttgtcacaaaa 31578469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 42532719 - 42532775
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| |||||||||||||  |||||||||||||||||   |||||||||||||||||    
T  42532719 aatagagagataaagtaaaaatataatgtgagtatgaga--aagaaagttgtcacaaaa 42532775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 3012834 - 3012904
Alignment:
Q  8 agataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||  ||||||| ||||||||||  |||||||||||||||||||  |||  |||||||||||||    
T  3012834 agataaagtaaaaa-ataatgtaagtatgagag--agaaagttgtcacaaaatggatgttcaaatatcatttct 3012904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 4138177 - 4138244
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||| |||||||||||||||||  ||||||||||| | |||||  || || |||||||||||||    
T  4138177 aaagtaaaattataatgtgagtatgaga--gagaaagttgttagaaaatagttatacaaatatcatttct 4138244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 9834077 - 9834140
Alignment:
Q  16 taaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||| |||||| ||||||||| ||  ||| |||||||| |||||| |||||||||||||||||||    
T  9834077 taaaaacataatatgagtatgaaag--agatagttgtcataaaatggttgtataaatatcatttct 9834140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 13538242 - 13538309
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||| |||||||||||||||| |  ||||||||||||| | |||| || ||||||||| ||||||    
T  13538242 aaagtaaaaacataatgtgagtatgata--gagaaagttgtcatataatggttatataaatattatttct 13538309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 79
Target Start/End: Complemental strand, 19529579 - 19529545
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcattt 79  Q
    ||||||||||||||||| |||||||||||||||||    
T  19529579 aaagttgtcacaaaatggttgtataaatatcattt 19529545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 23352893 - 23352943
Alignment:
Q  8 agataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatg 61  Q
    |||||||||||||  ||||||||||||||||||  |||||||||||||||||||    
T  23352893 agataaagtaaaaa-ataatgtgagtatgagag--agaaagttgtcacaaaatg 23352943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 27329105 - 27329168
Alignment:
Q  16 taaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||| ||||||||  |||||||||  ||||||||||  ||||||||||||| |||||||||||||    
T  27329105 taaaaacataatgtaggtatgagag--agaaagttgtaccaaaatgattgtacaaatatcatttct 27329168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 33737325 - 33737392
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||| ||||| ||||||||||||  |||||| ||||||||||||| | ||  |||||||||||||    
T  33737325 aaagtaaaaacataacgtgagtatgaga--gagaaatttgtcacaaaatggtagttcaaatatcatttct 33737392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 26277185 - 26277108
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| |||||||||||||  ||||||||||||| ||||  ||||||||||||| |||||  |||  |||||||||||||    
T  26277185 aatagagagataaagtaaaaa-ataatgtgagtataagag--agaaagttgtcactaaatggatgttcaaatatcatttct 26277108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 40937045 - 40937102
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatg 61  Q
    |||||| |||||||||||||  |||||||||||||||||  ||||||||| ||||||||||    
T  40937045 aatagagagataaagtaaaaa-ataatgtgagtatgaga--gagaaagttatcacaaaatg 40937102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 42866840 - 42866783
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatg 61  Q
    |||||| |||||||||||||  |||||||||||||||||  || |||||||||||||||||    
T  42866840 aatagagagataaagtaaaaa-ataatgtgagtatgaga--gaaaaagttgtcacaaaatg 42866783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 3196121 - 3196157
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||| |||||||| |||||||||||||    
T  3196121 aaagttgtcacaaattgattgtacaaatatcatttct 3196157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 6646889 - 6646836
Alignment:
Q  26 atgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||||  |||||||||||||||||||  |||  |||||||||||||    
T  6646889 atgtgagtatgagag--agaaagttgtcacaaaatggatgttcaaatatcatttct 6646836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 21805820 - 21805856
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||| ||||||||||| |||||||||||||    
T  21805820 aaagttgtcactaaatgattgtacaaatatcatttct 21805856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 25881627 - 25881579
Alignment:
Q  8 agataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||||||||||  ||||||||||||||||||  |||||||||||||||||    
T  25881627 agataaagtaaaaa-ataatgtgagtatgagag--agaaagttgtcacaaaa 25881579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 27307265 - 27307301
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||| |||||||| |||||||||||||    
T  27307265 aaagttgtcacaaattgattgtacaaatatcatttct 27307301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 30974023 - 30974059
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||| |||||||||||| |||||||||||||    
T  30974023 aaagttgtcataaaatgattgtaaaaatatcatttct 30974059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 36909877 - 36909913
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  36909877 aaagttgtcacaaaatggttgtacaaatatcatttct 36909913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 37966421 - 37966368
Alignment:
Q  26 atgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||||  | |||||||||||||| || ||||| |||||||||||||    
T  37966421 atgtgagtatgagag--aaaaagttgtcacaaattggttgtacaaatatcatttct 37966368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 39233736 - 39233772
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||| |||||||||||| |||||||||||||    
T  39233736 aaagttgtcaaaaaatgattgtaaaaatatcatttct 39233772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 44050095 - 44050050
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    ||||||||| ||||||||||||||||||  ||||| ||||||||||||    
T  44050095 aaagtaaaaacataatgtgagtatgaga--gagaaggttgtcacaaaa 44050050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 55322697 - 55322773
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcattt 79  Q
    |||||| ||| ||||||||| ||||||||||||||| |||  ||||||||||||||||||| | ||| |||||||||||    
T  55322697 aatagagagagaaagtaaaaacataatgtgagtatgggag--agaaagttgtcacaaaatgctcgtacaaatatcattt 55322773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 1765468 - 1765405
Alignment:
Q  16 taaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||| ||||||||| |||||||||  |||||||||||||||||||| |||| |||||||||||||    
T  1765468 taaaaacataatgtgcgtatgagag--agaaagttgtcacaaaatgaatgtacaaatatcatttct 1765405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 9753309 - 9753231
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||| ||| ||||| || ||||||||||||||||  | ||| ||||||||||||||||||  |||||||||||||    
T  9753309 aatagatagagaaaataaaaacacaatgtgagtatgagag--ataaaattgtcacaaaatgattgttcaaatatcatttct 9753231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 28700551 - 28700473
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| ||| ||||||||| ||||||||||||||||||  || |||||||||| |||||| ||||  |||||||||||||    
T  28700551 aatagagagagaaagtaaaaacataatgtgagtatgaga--gataaagttgtcaaaaaatggttgttcaaatatcatttct 28700473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 47683856 - 47683802
Alignment:
Q  25 aatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||  ||||||||||||||||||| ||||| |||||||||||||    
T  47683856 aatgtgagtatgagag--agaaagttgtcacaaaatggttgtacaaatatcatttct 47683802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 49761397 - 49761320
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| |||||||||||||  ||||||||||||||||||  |||||||||||||||||||  |||  |||||||||||||    
T  49761397 aatagagagataaagtaaaaa-ataatgtgagtatgagag--agaaagttgtcacaaaatggatgttcaaatatcatttct 49761320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 26672488 - 26672413
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| |||||||||||||  |||||||||||||||||| ||   |||||||||||||||| |||  |||||||||||||    
T  26672488 aatagagagataaagtaaaa--ataatgtgagtatgagagaga---agttgtcacaaaatgaatgttcaaatatcatttct 26672413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 42358619 - 42358675
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| |||||||||||||  |||||||||||||||||  ||||||||||||||||||    
T  42358619 aatagagagataaagtaaaaagataatgtgagtatgaga--gagaaagttgtcacaaaa 42358675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 43169756 - 43169812
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||||  | ||||||||||||||||| ||||| |||||||||||||    
T  43169756 ataatgtgagtatgagag--aaaaagttgtcacaaaatggttgtacaaatatcatttct 43169812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 52564640 - 52564704
Alignment:
Q  13 aagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||| |||||||||||||||||||    ||| ||||||||||||| ||||| |||||||||||||    
T  52564640 aagtaaaaacataatgtgagtatgagag----aaaattgtcacaaaatggttgtacaaatatcatttct 52564704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 30580201 - 30580134
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||| |||||| ||||||||| ||  | |||||||||| |||||| |||||||||||||||||||    
T  30580201 aaagtaaaaacataatatgagtatgaaag--ataaagttgtcataaaatggttgtataaatatcatttct 30580134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 46966081 - 46966160
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttctt 82  Q
    |||||||||| ||||||||| ||||| ||||||||||||   |||||||||| ||||||| ||||||  ||||| |||||||    
T  46966081 aatagatagagaaagtaaaaacataacgtgagtatgaga--aagaaagttgttacaaaataattgtacgaatattatttctt 46966160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 48893433 - 48893355
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| ||||||| |||||  |||||||||||||||||  || ||| |||||| ||||||| ||| ||||||||||||||    
T  48893433 aatagaaagataaaataaaaaaataatgtgagtatgaga--gaaaaaattgtcaaaaaatgaatgtttaaatatcatttct 48893355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 55361214 - 55361292
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| ||| |||||||||  ||||||||||||| ||||  ||||||||||||  ||||| ||||| |||||||||||||    
T  55361214 aatagagagagaaagtaaaaaaataatgtgagtataagag--agaaagttgtcaagaaatggttgtacaaatatcatttct 55361292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 20080162 - 20080108
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| |||||||||||||  ||||||||||||||||||  |||||||||||||||||    
T  20080162 aatagagagataaagtaaaa--ataatgtgagtatgagag--agaaagttgtcacaaaa 20080108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 35554118 - 35554175
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttctt 82  Q
    ||||||||||||||||||  |||||||||||| ||| ||||| || ||||||||||||||    
T  35554118 ataatgtgagtatgagag--agaaagttgtcaaaaagtgattatacaaatatcatttctt 35554175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 46953007 - 46952950
Alignment:
Q  22 cataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||||||||  |||||||| ||| |||||| ||||| |||||||||||||    
T  46953007 cataatgtgagtatgagag--agaaagttatcaaaaaatggttgtacaaatatcatttct 46952950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 288816 - 288760
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||| |||||||||  |||||||||||||||||  ||||||||||||||||||    
T  288816 aatagagagagaaagtaaaaaaataatgtgagtatgaga--gagaaagttgtcacaaaa 288760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 5244319 - 5244263
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||| |||||||||  |||||||||||||||||  ||||||||||||||||||    
T  5244319 aatagagagagaaagtaaaaaaataatgtgagtatgaga--gagaaagttgtcacaaaa 5244263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 6178406 - 6178462
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||| ||||||||| ||||||||||||||||||  |||||| |||||||||||    
T  6178406 aatagagagagaaagtaaaaacataatgtgagtatgaga--gagaaaattgtcacaaaa 6178462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 26014902 - 26014846
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||| |||||||||  |||||||||||||||||  ||||||||||||||||||    
T  26014902 aatagagagagaaagtaaaaagataatgtgagtatgaga--gagaaagttgtcacaaaa 26014846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 26550328 - 26550272
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||| |||||||||| ||||||||| ||||||||  |||||||||||||||||    
T  26550328 aatagagagagaaagtaaaattataatgtgaatatgagag--agaaagttgtcacaaaa 26550272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 29573337 - 29573392
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||||||||||||| |||| ||||||||||||||  |||||||||||||||||    
T  29573337 aatagagagataaagtaaaaacata-tgtgagtatgagag--agaaagttgtcacaaaa 29573392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 39629819 - 39629875
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||| ||||||||| ||||||||||||||||||  ||||| ||||||||||||    
T  39629819 aatagagagagaaagtaaaaacataatgtgagtatgaga--gagaaggttgtcacaaaa 39629875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 41505581 - 41505525
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||| |||||||||  |||||||||||||||||  ||||||||||||||||||    
T  41505581 aatagagagagaaagtaaaaagataatgtgagtatgaga--gagaaagttgtcacaaaa 41505525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 49167841 - 49167785
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| |||||||||||||  |||||||| ||||||||  ||||||||||||||||||    
T  49167841 aatagagagataaagtaaaaatataatgtgtgtatgaga--gagaaagttgtcacaaaa 49167785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 50745617 - 50745561
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||||  ||||||||||   |||||||||||| |||||||||||||    
T  50745617 ataatgtgagtatgagag--agaaagttgtacaaaaatgattgtacaaatatcatttct 50745561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 52431203 - 52431259
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||| ||||||||  |||||||| ||| ||||||||||||||||||| ||||||    
T  52431203 ataatgtgaatatgagag--agaaagttatcataaaatgattgtataaatattatttct 52431259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 9719444 - 9719511
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||  ||||||||||||||||||||  |||| |||||| ||| || ||||| |||||||||||||    
T  9719444 aaagtaaagacataatgtgagtatgagagg--gaaaattgtcaaaaagtggttgtacaaatatcatttct 9719511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 35377073 - 35377144
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa-tgattgtataaatatcatttctttt 84  Q
    ||||||||| |||||||||||| |||||  |||||||||||||||||| |  ||||  ||||||||||||||||    
T  35377073 aaagtaaaaacataatgtgagtgtgaga--gagaaagttgtcacaaaagttgttgttcaaatatcatttctttt 35377144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 38926718 - 38926663
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaa 58  Q
    |||||| ||| |||||||||  |||||||||||||||||  |||||||||||||||||    
T  38926718 aatagagagagaaagtaaaaagataatgtgagtatgaga--gagaaagttgtcacaaa 38926663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 83
Target Start/End: Complemental strand, 39929019 - 39928978
Alignment:
Q  42 gagaaagttgtcacaaaatgattgtataaatatcatttcttt 83  Q
    ||||||||| |||||||||||||||| ||||||| |||||||    
T  39929019 gagaaagttatcacaaaatgattgtacaaatatcgtttcttt 39928978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 50876343 - 50876421
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| ||| ||| ||||| |||||| ||||||||| ||  |||||||||||| |||||  ||||| |||||||||||||    
T  50876343 aatagaaagagaaaataaaaacataatatgagtatgatag--agaaagttgtcaaaaaattgttgtacaaatatcatttct 50876421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 54195430 - 54195352
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| |||||||||||||  ||||||||||||| | |  |||||||||||||| |||||  |||  |||||||||||||    
T  54195430 aatagagagataaagtaaaaaaataatgtgagtataaaa--gagaaagttgtcactaaatggatgttcaaatatcatttct 54195352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 7248 - 7284
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||| |||||||||||| |||||||||||||    
T  7248 aaagttgtcagaaaatgattgtacaaatatcatttct 7284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 462435 - 462471
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  462435 aaagttgtcacaaaatggttgtacaaatatcatttct 462471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 8254064 - 8254028
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  8254064 aaagttgtcacaaaatggttgtacaaatatcatttct 8254028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 11327145 - 11327109
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  11327145 aaagttgtcacaaaatggttgtacaaatatcatttct 11327109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 14771576 - 14771648
Alignment:
Q  13 aagtaaaatcataatgtgagtatgagagggagaaag-ttgtcacaaaatgattgtataaatatcatttctttt 84  Q
    |||||||| |||||||||||||| |||  || |||  ||||||| ||||  ||||||||||||||||||||||    
T  14771576 aagtaaaaacataatgtgagtataagatagacaaaaattgtcacgaaatagttgtataaatatcatttctttt 14771648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 23906993 - 23907046
Alignment:
Q  26 atgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||||  |||||||||| ||| |||| ||||| |||||||||||||    
T  23906993 atgtgagtatgagag--agaaagttgtaacataatggttgtacaaatatcatttct 23907046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 28884545 - 28884492
Alignment:
Q  26 atgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||||  |||||||||||||| |||| ||||| |||||| ||||||    
T  28884545 atgtgagtatgagag--agaaagttgtcacataatggttgtacaaatattatttct 28884492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 59
Target Start/End: Original strand, 29917015 - 29917060
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||||||  |||||||||||||||||  ||||||||||||||||||    
T  29917015 aaagtaaaaatataatgtgagtatgaga--gagaaagttgtcacaaaa 29917060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 59
Target Start/End: Original strand, 29966168 - 29966213
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||||||  |||||||||||||||||  ||||||||||||||||||    
T  29966168 aaagtaaaaatataatgtgagtatgaga--gagaaagttgtcacaaaa 29966213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 81
Target Start/End: Original strand, 31206889 - 31206921
Alignment:
Q  49 ttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||||| |||||||||||||    
T  31206889 ttgtcacaaaatgattgtacaaatatcatttct 31206921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 34021497 - 34021533
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||| |||||||| |||||||||||||    
T  34021497 aaagttgtcacaaattgattgtacaaatatcatttct 34021533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 35074124 - 35074160
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  35074124 aaagttgtcccaaaatgattgtacaaatatcatttct 35074160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 47101559 - 47101523
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  47101559 aaagttgtcacaaaatggttgtacaaatatcatttct 47101523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 48405447 - 48405411
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  48405447 aaagttgtcacaaaatggttgtacaaatatcatttct 48405411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 48405490 - 48405445
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    ||||||||| ||||||||||||||||||  ||||||||||| ||||||    
T  48405490 aaagtaaaaacataatgtgagtatgaga--gagaaagttgttacaaaa 48405445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 49196733 - 49196697
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  49196733 aaagttgtcacaaaatggttgtacaaatatcatttct 49196697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 50146542 - 50146489
Alignment:
Q  26 atgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||| ||||||||||  ||||| |||||||||||||||| || |||||||||||||    
T  50146542 atgtaagtatgagag--agaaaattgtcacaaaatgattatacaaatatcatttct 50146489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 52454128 - 52454164
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||| |||||||| |||||||||||||    
T  52454128 aaagttgtcacaaattgattgtacaaatatcatttct 52454164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 31603 - 31659
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||||  |||||||||||| |||||| ||||| |||||||||||||    
T  31603 ataatgtgagtatgagag--agaaagttgtcaaaaaatggttgtacaaatatcatttct 31659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000002; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 1839326 - 1839401
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcattt 79  Q
    |||||| |||||||||||||  ||||||||||||||||||  |||||||||||||||||||  |||  |||||||||||    
T  1839326 aatagaaagataaagtaaaaa-ataatgtgagtatgagag--agaaagttgtcacaaaatggatgttcaaatatcattt 1839401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 14206457 - 14206401
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||||  |||||||||||| |||||| ||||| |||||||||||||    
T  14206457 ataatgtgagtatgagag--agaaagttgtcaaaaaatggttgtacaaatatcatttct 14206401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 38493715 - 38493659
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| |||||||||||||| |||||||||||||||||  ||||||||| ||||||||    
T  38493715 aatagagagataaagtaaaattataatgtgagtatgaga--gagaaagttatcacaaaa 38493659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 33910091 - 33910150
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttctttt 84  Q
    ||||||||||||||||||  |||||||||||| |||||| ||| | ||||||||||||||||    
T  33910091 ataatgtgagtatgagag--agaaagttgtcaaaaaatggttgaacaaatatcatttctttt 33910150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 29463086 - 29463029
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaa 58  Q
    |||||| ||| ||| ||||| || |||||||||||||||| |||||||||||||||||    
T  29463086 aatagagagagaaaataaaaacaaaatgtgagtatgagagagagaaagttgtcacaaa 29463029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 33567226 - 33567280
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcattt 79  Q
    ||||||||||||||||||  |||||||||||||||| || ||||| |||||||||||    
T  33567226 ataatgtgagtatgagag--agaaagttgtcacaaagtggttgtacaaatatcattt 33567280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 372726 - 372779
Alignment:
Q  26 atgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||||  ||||||||||||||||||| ||||| ||| |||||||||    
T  372726 atgtgagtatgagag--agaaagttgtcacaaaatggttgtacaaaaatcatttct 372779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 6865793 - 6865846
Alignment:
Q  26 atgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||||  |||||||||||||||| || ||||| |||||||||||||    
T  6865793 atgtgagtatgagag--agaaagttgtcacaaagtggttgtacaaatatcatttct 6865846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 27440516 - 27440480
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||||||||| |||||||||||||    
T  27440516 aaagttgtcacaaaatgattgtacaaatatcatttct 27440480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 41460153 - 41460117
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||| ||||||||||||||||||||||||||    
T  41460153 aaagttgtcaaaaaatgattgtataaatatcatttct 41460117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 41865607 - 41865676
Alignment:
Q  8 agataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcattt 79  Q
    |||||||||||||  ||||||||||||||| ||  | ||| ||||||||||||  |||||||||||||||||    
T  41865607 agataaagtaaaaatataatgtgagtatgaaag--ataaaattgtcacaaaatagttgtataaatatcattt 41865676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 6940131 - 6940186
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||||||||||||| |||| ||||||||||||||  |||||||||||||||||    
T  6940131 aatagagagataaagtaaaaacata-tgtgagtatgagag--agaaagttgtcacaaaa 6940186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 13089762 - 13089818
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| |||||||||| ||| ||||||||||||||| |  ||||||||||||||||||    
T  13089762 aatagagagataaagtagaatgataatgtgagtatgaaa--gagaaagttgtcacaaaa 13089818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 13734363 - 13734419
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||||  |||||||||||| ||| || ||||| |||||||||||||    
T  13734363 ataatgtgagtatgagag--agaaagttgtcataaagtggttgtacaaatatcatttct 13734419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 18695408 - 18695353
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||||||||||||| |||| ||||||||||||||  |||||||||||||||||    
T  18695408 aatagagagataaagtaaaaacata-tgtgagtatgagag--agaaagttgtcacaaaa 18695353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 20770221 - 20770166
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| |||||||||||||  ||||||||||||||||||  |||||||||||||||||    
T  20770221 aatagagagataaagtaaaaa-ataatgtgagtatgagag--agaaagttgtcacaaaa 20770166  T

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Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 22098346 - 22098290
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| ||| |||||||||  |||||||||||||||||  ||||||||||||||||||    
T  22098346 aatagagagagaaagtaaaaatataatgtgagtatgaga--gagaaagttgtcacaaaa 22098290  T

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Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 41175687 - 41175742
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| |||||||||||||  |||||||||||||||||  ||||||||||||||||||    
T  41175687 aatagagagataaagtaaaaa-ataatgtgagtatgaga--gagaaagttgtcacaaaa 41175742  T

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Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 7927394 - 7927356
Alignment:
Q  43 agaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||| || ||||||||||||||||||||||||||||||    
T  7927394 agaaaattatcacaaaatgattgtataaatatcatttct 7927356  T

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Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 9226390 - 9226314
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| |||||||||||||  |||||||||||||||||  |||||||||||||  |||||  |||  |||||||||||||    
T  9226390 aatagagagataaagtaaaa--ataatgtgagtatgaga--gagaaagttgtcattaaatggatgttcaaatatcatttct 9226314  T

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Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 16143429 - 16143391
Alignment:
Q  43 agaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  16143429 agaaagttgtcacaaaatggttgtacaaatatcatttct 16143391  T

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Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 19952079 - 19952012
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||| |||||| ||||||||||||  | ||| ||||||||||||| || || |||||||||||||    
T  19952079 aaagtaaaaacataatatgagtatgagag--acaaatttgtcacaaaatggttttacaaatatcatttct 19952012  T

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Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 42211609 - 42211538
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatat 74  Q
    |||||| ||| ||||||||| |||||||||||| |||||  |||||| |||||| ||||||||| || ||||||    
T  42211609 aatagacagagaaagtaaaaacataatgtgagtttgaga--gagaaaattgtcaaaaaatgattttacaaatat 42211538  T

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Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 611953 - 611899
Alignment:
Q  3 tagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||| ||| ||| |||||| |||||||||||||||||  ||||||||||||||||||    
T  611953 tagagagagaaaataaaatgataatgtgagtatgaga--gagaaagttgtcacaaaa 611899  T

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Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 3640178 - 3640255
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| |||||||||||||  |||||||||||||||||  |||||||||||| ||||||   |||  |||||||||||||    
T  3640178 aatagaaagataaagtaaaaa-ataatgtgagtatgaga--gagaaagttgtctcaaaatagatgttcaaatatcatttct 3640255  T

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Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 13461802 - 13461765
Alignment:
Q  44 gaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||| ||||||||||||||||||||| ||||||||    
T  13461802 gaaagttatcacaaaatgattgtataaatttcatttct 13461765  T

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Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 34080293 - 34080359
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttc 80  Q
    ||||||||| |||||| | | ||||||||  | ||| |||||| |||||||||||||||||||||||||    
T  34080293 aaagtaaaaacataatataaatatgagag--acaaaattgtcataaaatgattgtataaatatcatttc 34080359  T

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Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 36739038 - 36738984
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaa 57  Q
    |||||| ||| |||||||||  |||||||||||||||||  ||||||||||||||||    
T  36739038 aatagagagagaaagtaaaaagataatgtgagtatgaga--gagaaagttgtcacaa 36738984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 42267436 - 42267358
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||| |||||||||||||  |||||||| ||||||||  || ||||||||||| |||||| ||   |||||||||||||    
T  42267436 aatagagagataaagtaaaaatataatgtgtgtatgaga--gaaaaagttgtcactaaatgaatgatcaaatatcatttct 42267358  T

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Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 884532 - 884475
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaat 60  Q
    |||||| ||| |||||||||  |||||||||||||||||  || ||||||||||||||||    
T  884532 aatagaaagagaaagtaaaaatataatgtgagtatgaga--gataaagttgtcacaaaat 884475  T

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Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 3109621 - 3109657
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||||||| |||||||| |||||||||||||    
T  3109621 aaagttgtcacaaattgattgtacaaatatcatttct 3109657  T

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Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 6420709 - 6420673
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  6420709 aaagttgtcacaaaatggttgtagaaatatcatttct 6420673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 59
Target Start/End: Original strand, 7552957 - 7553002
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    ||||||||| |||||||||||| |||||  ||||||||||||||||||    
T  7552957 aaagtaaaaacataatgtgagtgtgaga--gagaaagttgtcacaaaa 7553002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 11148591 - 11148546
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    ||||||||| ||||||||||||||||||  ||||| ||||||||||||    
T  11148591 aaagtaaaaacataatgtgagtatgaga--gagaatgttgtcacaaaa 11148546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 14532584 - 14532539
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    ||||||||| || |||||||||||||||  ||||||||||||||||||    
T  14532584 aaagtaaaaacaaaatgtgagtatgaga--gagaaagttgtcacaaaa 14532539  T

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Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 14914409 - 14914373
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  14914409 aaagttgtcacaaaatggttgtacaaatatcatttct 14914373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 17063902 - 17063866
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    |||||||||| |||||||||||| |||||||||||||    
T  17063902 aaagttgtcaaaaaatgattgtacaaatatcatttct 17063866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 27546965 - 27546929
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  27546965 aaagttgtcacaaaatgattgtatagataccatttct 27546929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 29227774 - 29227721
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatt 78  Q
    ||||||||||||||||||  |||||||||||||||| |  ||||| ||||||||||    
T  29227774 ataatgtgagtatgagag--agaaagttgtcacaaagtagttgtacaaatatcatt 29227721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 35649968 - 35650025
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaat 60  Q
    |||||| ||| ||||||||| ||||||||||||||||||  || |||||||||| |||||    
T  35649968 aatagagagagaaagtaaaaacataatgtgagtatgaga--gaaaaagttgtcaaaaaat 35650025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 42699094 - 42699058
Alignment:
Q  45 aaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  42699094 aaagttgtcacaaaatggttgtacaaatatcatttct 42699058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0532 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 11054 - 10999
Alignment:
Q  1 aatagatagataaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||| |||||||||||||  ||||||||||||||||||  |||||||||||||||||    
T  11054 aatagagagataaagtaaaaa-ataatgtgagtatgagag--agaaagttgtcacaaaa 10999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 18650 - 18706
Alignment:
Q  23 ataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttct 81  Q
    ||||||| ||||||||||  ||||| |||||||||| |||||||| |||||||||||||    
T  18650 ataatgtaagtatgagag--agaaaattgtcacaaattgattgtacaaatatcatttct 18706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 11014 - 10971
Alignment:
Q  14 agtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    |||||||| |||||||||||||||||  ||||||||||||||||||    
T  11014 agtaaaatgataatgtgagtatgaga--gagaaagttgtcacaaaa 10971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 59
Target Start/End: Original strand, 34785 - 34830
Alignment:
Q  12 aaagtaaaatcataatgtgagtatgagagggagaaagttgtcacaaaa 59  Q
    ||||||||| ||||||||||||||||||  ||||||||||||| ||||    
T  34785 aaagtaaaaacataatgtgagtatgaga--gagaaagttgtcataaaa 34830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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