View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18974_low_133 (Length: 210)
Name: NF18974_low_133
Description: NF18974
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18974_low_133 |
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Alignment Details
Target: chr3 (Bit Score: 141; Significance: 4e-74; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 38091211 - 38091067
Alignment:
| Q |
17 |
cataggaatacaattttcttgagagaatatgaatgcatcctattttgatcctaatatagtctcgaccttacatatcaagaaaaacatgaaacaaacacat |
116 |
Q |
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| T |
38091211 |
cataggaatacaattttcttgagagaatatgaatgcatcctattttgatcctaatatagtctcgaccttacgtatcaagaaaaacatgaaacaaacacat |
38091112 |
T |
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| Q |
117 |
cctatttcttatcctaattaatgttgacaactatcaagcaaaaac |
161 |
Q |
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| T |
38091111 |
cctatttcttatcctaattaatgttgacaactatcaagcaaaaac |
38091067 |
T |
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