View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18974_low_91 (Length: 286)

Name: NF18974_low_91
Description: NF18974
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18974_low_91
NF18974_low_91
[»] chr6 (33 HSPs)
chr6 (19-276)||(14737403-14737660)
chr6 (19-279)||(22010520-22010781)
chr6 (19-279)||(11856975-11857236)
chr6 (19-276)||(14742263-14742520)
chr6 (19-267)||(28184506-28184757)
chr6 (19-261)||(28155412-28155653)
chr6 (19-261)||(6438502-6438743)
chr6 (19-248)||(16838745-16838977)
chr6 (19-248)||(6005418-6005650)
chr6 (19-248)||(33330297-33330529)
chr6 (19-248)||(33335794-33336026)
chr6 (20-197)||(5674685-5674865)
chr6 (197-276)||(5674554-5674633)
chr6 (18-113)||(5757479-5757576)
chr6 (18-113)||(21356035-21356132)
chr6 (14-103)||(4629949-4630040)
chr6 (19-103)||(10077176-10077262)
chr6 (19-113)||(5572241-5572338)
chr6 (19-102)||(31086485-31086570)
chr6 (50-101)||(22709050-22709102)
chr6 (19-64)||(5343482-5343527)
chr6 (31-113)||(21801344-21801429)
chr6 (19-113)||(31979513-31979610)
chr6 (168-248)||(5343628-5343710)
chr6 (40-113)||(18232867-18232942)
chr6 (58-113)||(22963739-22963796)
chr6 (58-113)||(23824597-23824654)
chr6 (197-259)||(5017304-5017364)
chr6 (199-276)||(22709241-22709316)
chr6 (124-197)||(22709116-22709188)
chr6 (19-101)||(5017482-5017566)
chr6 (23-82)||(12195515-12195575)
chr6 (19-82)||(31936587-31936651)
[»] chr1 (43 HSPs)
chr1 (19-279)||(41398237-41398498)
chr1 (19-279)||(41390582-41390843)
chr1 (19-261)||(25444931-25445173)
chr1 (19-261)||(39445501-39445742)
chr1 (19-261)||(44023716-44023957)
chr1 (19-261)||(1054854-1055095)
chr1 (19-248)||(43988314-43988548)
chr1 (19-197)||(24787280-24787460)
chr1 (123-261)||(25439738-25439875)
chr1 (18-197)||(24202686-24202866)
chr1 (18-197)||(19358760-19358940)
chr1 (198-276)||(24787148-24787226)
chr1 (18-197)||(19361349-19361529)
chr1 (18-197)||(19379989-19380169)
chr1 (197-276)||(24202556-24202635)
chr1 (18-113)||(26644898-26644995)
chr1 (17-113)||(19072926-19073025)
chr1 (17-113)||(19120816-19120915)
chr1 (19-104)||(47703946-47704033)
chr1 (49-113)||(27104372-27104438)
chr1 (18-113)||(3281707-3281804)
chr1 (19-113)||(16124516-16124613)
chr1 (19-104)||(9476261-9476348)
chr1 (19-104)||(13598398-13598485)
chr1 (19-104)||(29651811-29651898)
chr1 (18-111)||(37069769-37069864)
chr1 (49-113)||(21536570-21536635)
chr1 (19-104)||(775672-775759)
chr1 (197-276)||(19366095-19366174)
chr1 (49-113)||(13604624-13604689)
chr1 (19-101)||(47098837-47098921)
chr1 (197-276)||(19361220-19361298)
chr1 (197-276)||(19358631-19358709)
chr1 (130-197)||(19366225-19366292)
chr1 (197-259)||(47098633-47098693)
chr1 (197-259)||(47102647-47102707)
chr1 (197-258)||(3281936-3281995)
chr1 (40-101)||(32889461-32889523)
chr1 (23-82)||(9459419-9459479)
chr1 (23-82)||(9463246-9463306)
chr1 (197-276)||(13604413-13604490)
chr1 (23-82)||(16226386-16226446)
chr1 (199-258)||(37069998-37070055)
[»] chr5 (49 HSPs)
chr5 (19-279)||(1456985-1457246)
chr5 (19-279)||(15044687-15044948)
chr5 (19-279)||(43592280-43592541)
chr5 (19-279)||(27449815-27450076)
chr5 (19-279)||(27444971-27445232)
chr5 (31-279)||(43598737-43598986)
chr5 (31-279)||(43604229-43604478)
chr5 (31-279)||(43609721-43609970)
chr5 (19-248)||(28807429-28807656)
chr5 (19-248)||(37556478-37556706)
chr5 (19-248)||(37561300-37561528)
chr5 (19-248)||(2785376-2785608)
chr5 (19-248)||(33791317-33791549)
chr5 (19-196)||(30631407-30631586)
chr5 (19-197)||(31180215-31180394)
chr5 (19-248)||(31396843-31397077)
chr5 (19-248)||(31401700-31401934)
chr5 (19-248)||(33768180-33768417)
chr5 (18-197)||(38192173-38192353)
chr5 (18-197)||(38219398-38219578)
chr5 (19-197)||(24135849-24136028)
chr5 (197-276)||(30631640-30631719)
chr5 (197-276)||(31180447-31180526)
chr5 (18-197)||(35387662-35387842)
chr5 (197-276)||(24136080-24136159)
chr5 (18-113)||(9353333-9353430)
chr5 (18-113)||(36932351-36932448)
chr5 (17-113)||(10281749-10281848)
chr5 (197-276)||(35387893-35387972)
chr5 (18-113)||(15464531-15464628)
chr5 (20-113)||(11916972-11917068)
chr5 (197-276)||(38219629-38219708)
chr5 (18-113)||(14520229-14520326)
chr5 (16-113)||(19588743-19588843)
chr5 (40-113)||(3880321-3880396)
chr5 (19-104)||(17003970-17004057)
chr5 (49-113)||(12084176-12084241)
chr5 (19-101)||(28832259-28832343)
chr5 (23-82)||(4410241-4410301)
chr5 (197-276)||(24553318-24553395)
chr5 (19-101)||(42127423-42127507)
chr5 (197-258)||(11181641-11181700)
chr5 (199-259)||(7160712-7160770)
chr5 (199-259)||(14520461-14520519)
chr5 (197-257)||(28832486-28832544)
chr5 (23-82)||(15552464-15552524)
chr5 (23-82)||(31179371-31179431)
chr5 (23-82)||(31542953-31543013)
chr5 (23-82)||(31545299-31545359)
[»] chr7 (50 HSPs)
chr7 (19-279)||(24024150-24024410)
chr7 (19-279)||(31109406-31109667)
chr7 (19-279)||(12396912-12397173)
chr7 (19-271)||(12406332-12406585)
chr7 (19-248)||(19992314-19992544)
chr7 (19-248)||(21812092-21812322)
chr7 (19-248)||(24266054-24266286)
chr7 (19-248)||(24261175-24261407)
chr7 (19-197)||(20357463-20357643)
chr7 (19-248)||(16884930-16885162)
chr7 (19-248)||(16880074-16880306)
chr7 (19-197)||(1533359-1533540)
chr7 (19-197)||(2057966-2058147)
chr7 (18-197)||(21639808-21639988)
chr7 (19-108)||(4866731-4866820)
chr7 (18-197)||(18408763-18408943)
chr7 (199-276)||(4873310-4873387)
chr7 (18-197)||(21646006-21646186)
chr7 (197-276)||(20357331-20357410)
chr7 (18-197)||(18413640-18413819)
chr7 (197-276)||(1533228-1533307)
chr7 (197-276)||(2058202-2058281)
chr7 (20-103)||(21983285-21983370)
chr7 (19-113)||(29159803-29159900)
chr7 (197-276)||(21640039-21640118)
chr7 (197-259)||(21646237-21646299)
chr7 (18-113)||(44848685-44848782)
chr7 (19-113)||(46516310-46516407)
chr7 (19-113)||(49091661-49091758)
chr7 (197-276)||(18408993-18409072)
chr7 (19-113)||(2647696-2647793)
chr7 (19-113)||(33332450-33332547)
chr7 (19-101)||(9190021-9190105)
chr7 (19-101)||(20284089-20284173)
chr7 (197-276)||(18413869-18413948)
chr7 (19-159)||(2580390-2580531)
chr7 (19-113)||(55948-56044)
chr7 (49-102)||(35960847-35960901)
chr7 (19-113)||(4796667-4796764)
chr7 (22-82)||(28617258-28617319)
chr7 (19-101)||(9185178-9185262)
chr7 (197-259)||(20284318-20284378)
chr7 (197-259)||(23402821-23402881)
chr7 (18-98)||(47263677-47263757)
chr7 (18-102)||(2479336-2479421)
chr7 (197-258)||(4796477-4796536)
chr7 (199-259)||(44847933-44847991)
chr7 (197-276)||(2479565-2479642)
chr7 (197-256)||(21989137-21989194)
chr7 (23-82)||(31155911-31155971)
[»] chr2 (49 HSPs)
chr2 (19-279)||(39811811-39812072)
chr2 (19-261)||(32246789-32247031)
chr2 (19-248)||(19344422-19344655)
chr2 (19-248)||(19349280-19349513)
chr2 (19-163)||(44312563-44312708)
chr2 (19-197)||(11098843-11099023)
chr2 (19-197)||(14291489-14291669)
chr2 (19-197)||(9296317-9296497)
chr2 (18-197)||(3491750-3491930)
chr2 (18-197)||(25398495-25398675)
chr2 (18-197)||(25403633-25403813)
chr2 (197-276)||(11098711-11098790)
chr2 (197-276)||(9296186-9296265)
chr2 (197-276)||(14291722-14291801)
chr2 (49-197)||(25407653-25407802)
chr2 (19-104)||(8040060-8040147)
chr2 (22-195)||(13569331-13569506)
chr2 (18-101)||(40738843-40738926)
chr2 (19-113)||(21629944-21630040)
chr2 (18-113)||(28259178-28259275)
chr2 (197-259)||(25409860-25409922)
chr2 (19-113)||(10445444-10445541)
chr2 (19-113)||(17865203-17865300)
chr2 (19-113)||(20522220-20522317)
chr2 (19-113)||(34682334-34682431)
chr2 (20-113)||(34388859-34388955)
chr2 (19-113)||(14699008-14699104)
chr2 (20-113)||(10707252-10707348)
chr2 (197-259)||(3491981-3492043)
chr2 (49-113)||(8390150-8390216)
chr2 (17-104)||(31056042-31056131)
chr2 (40-113)||(42039670-42039744)
chr2 (18-113)||(23078471-23078568)
chr2 (19-113)||(33528621-33528718)
chr2 (19-113)||(39482931-39483028)
chr2 (40-103)||(33118158-33118222)
chr2 (197-276)||(40739063-40739140)
chr2 (19-104)||(16940219-16940306)
chr2 (19-104)||(17010884-17010971)
chr2 (197-259)||(36757570-36757630)
chr2 (18-159)||(36757718-36757860)
chr2 (197-259)||(39483162-39483222)
chr2 (197-257)||(21630174-21630232)
chr2 (219-259)||(20522471-20522511)
chr2 (197-260)||(23078278-23078339)
chr2 (197-260)||(29867780-29867840)
chr2 (23-82)||(35215586-35215646)
chr2 (23-82)||(35217963-35218023)
chr2 (197-259)||(41586358-41586419)
[»] chr8 (49 HSPs)
chr8 (19-279)||(7289749-7290010)
chr8 (19-276)||(25328105-25328362)
chr8 (19-261)||(39784665-39784906)
chr8 (19-248)||(35745392-35745624)
chr8 (19-197)||(6311298-6311477)
chr8 (19-248)||(10684116-10684348)
chr8 (19-197)||(36979378-36979558)
chr8 (19-197)||(30655647-30655827)
chr8 (19-196)||(33037724-33037902)
chr8 (19-197)||(18853083-18853264)
chr8 (19-197)||(18870477-18870658)
chr8 (19-197)||(4759991-4760171)
chr8 (19-197)||(10689058-10689239)
chr8 (197-279)||(6311532-6311614)
chr8 (18-197)||(1261871-1262051)
chr8 (197-276)||(18870345-18870424)
chr8 (185-276)||(25327979-25328070)
chr8 (197-276)||(30655880-30655959)
chr8 (197-276)||(10688924-10689003)
chr8 (197-276)||(18852951-18853030)
chr8 (197-276)||(33037592-33037671)
chr8 (18-197)||(31071146-31071327)
chr8 (18-101)||(26287901-26287985)
chr8 (18-101)||(26301158-26301242)
chr8 (18-101)||(26313152-26313236)
chr8 (197-277)||(4759857-4759938)
chr8 (197-276)||(1261741-1261820)
chr8 (197-276)||(36979611-36979689)
chr8 (19-104)||(26403240-26403327)
chr8 (40-113)||(4456050-4456124)
chr8 (22-113)||(7412344-7412437)
chr8 (18-113)||(19175755-19175852)
chr8 (14-113)||(6127216-6127318)
chr8 (19-113)||(23799577-23799674)
chr8 (19-101)||(4696609-4696693)
chr8 (197-257)||(31071035-31071095)
chr8 (21-82)||(9765852-9765914)
chr8 (197-259)||(26288121-26288183)
chr8 (197-259)||(26301378-26301440)
chr8 (197-259)||(26313372-26313434)
chr8 (19-113)||(5702483-5702580)
chr8 (197-259)||(7412569-7412629)
chr8 (19-101)||(19752407-19752491)
chr8 (197-259)||(4696416-4696476)
chr8 (17-85)||(6813681-6813750)
chr8 (49-82)||(18810982-18811015)
chr8 (200-259)||(23799384-23799441)
chr8 (23-82)||(43079877-43079937)
chr8 (23-82)||(43082248-43082308)
[»] scaffold0135 (1 HSPs)
scaffold0135 (19-279)||(34885-35146)
[»] chr4 (44 HSPs)
chr4 (19-279)||(9224230-9224491)
chr4 (19-279)||(9229017-9229278)
chr4 (19-275)||(51520458-51520715)
chr4 (19-276)||(3814025-3814281)
chr4 (19-261)||(45347658-45347901)
chr4 (19-261)||(45357138-45357380)
chr4 (19-261)||(5732666-5732907)
chr4 (19-248)||(18855728-18855956)
chr4 (19-197)||(24741941-24742121)
chr4 (31-149)||(56146664-56146783)
chr4 (19-195)||(29760642-29760821)
chr4 (191-279)||(18712589-18712677)
chr4 (197-276)||(24742174-24742253)
chr4 (197-276)||(29760874-29760954)
chr4 (18-101)||(28468542-28468626)
chr4 (18-197)||(31985552-31985731)
chr4 (19-113)||(10047379-10047476)
chr4 (19-113)||(39245994-39246091)
chr4 (19-113)||(36315230-36315326)
chr4 (19-113)||(36329439-36329535)
chr4 (18-113)||(5396672-5396769)
chr4 (19-113)||(16623293-16623390)
chr4 (17-113)||(3796519-3796618)
chr4 (19-104)||(38152449-38152536)
chr4 (20-103)||(5143260-5143345)
chr4 (19-101)||(5269204-5269288)
chr4 (19-104)||(24333809-24333896)
chr4 (20-103)||(5147678-5147763)
chr4 (51-113)||(16630680-16630744)
chr4 (20-113)||(3777550-3777645)
chr4 (197-276)||(28468325-28468404)
chr4 (24-104)||(6743425-6743507)
chr4 (197-256)||(5112466-5112523)
chr4 (197-259)||(3777778-3777838)
chr4 (197-259)||(5396479-5396539)
chr4 (197-259)||(16623101-16623161)
chr4 (197-259)||(16628680-16628740)
chr4 (199-259)||(5269008-5269066)
chr4 (197-256)||(6743226-6743283)
chr4 (23-82)||(16931789-16931849)
chr4 (23-82)||(16934143-16934203)
chr4 (23-82)||(22780373-22780433)
chr4 (200-259)||(25861841-25861898)
chr4 (23-82)||(44599838-44599898)
[»] chr3 (68 HSPs)
chr3 (19-279)||(22173018-22173279)
chr3 (19-261)||(18656436-18656677)
chr3 (19-248)||(2676939-2677171)
chr3 (19-248)||(2672783-2673015)
chr3 (19-197)||(28503780-28503960)
chr3 (19-248)||(24968108-24968340)
chr3 (19-248)||(8512218-8512450)
chr3 (19-248)||(8517098-8517330)
chr3 (19-197)||(7167245-7167425)
chr3 (62-197)||(28501613-28501750)
chr3 (19-194)||(8738982-8739159)
chr3 (19-194)||(9091220-9091397)
chr3 (19-248)||(32475486-32475717)
chr3 (19-248)||(32480344-32480575)
chr3 (19-197)||(8477363-8477545)
chr3 (19-197)||(40372712-40372891)
chr3 (19-197)||(2671502-2671682)
chr3 (18-197)||(26928507-26928688)
chr3 (197-277)||(8738846-8738926)
chr3 (197-276)||(2671370-2671449)
chr3 (197-276)||(40372580-40372659)
chr3 (197-276)||(7167478-7167558)
chr3 (197-273)||(8477598-8477674)
chr3 (197-276)||(9091085-9091164)
chr3 (18-197)||(32143320-32143501)
chr3 (197-276)||(28501480-28501560)
chr3 (197-276)||(28503647-28503727)
chr3 (18-197)||(1305948-1306128)
chr3 (18-197)||(27452957-27453138)
chr3 (18-113)||(8370477-8370574)
chr3 (18-113)||(27974943-27975040)
chr3 (18-113)||(16264349-16264446)
chr3 (19-113)||(18552873-18552970)
chr3 (18-101)||(27986449-27986534)
chr3 (19-113)||(21711223-21711319)
chr3 (20-113)||(36029094-36029190)
chr3 (22-113)||(1736295-1736389)
chr3 (18-113)||(30709780-30709878)
chr3 (18-101)||(33386669-33386754)
chr3 (19-67)||(10207935-10207983)
chr3 (40-113)||(48438236-48438311)
chr3 (40-113)||(6794704-6794778)
chr3 (19-113)||(3715992-3716089)
chr3 (19-113)||(40592772-40592869)
chr3 (197-257)||(1306179-1306239)
chr3 (17-113)||(25795779-25795878)
chr3 (19-113)||(26298988-26299085)
chr3 (19-101)||(1417493-1417577)
chr3 (14-85)||(4386947-4387019)
chr3 (18-101)||(39039995-39040080)
chr3 (19-113)||(47923896-47923993)
chr3 (200-259)||(4386774-4386831)
chr3 (197-276)||(27986236-27986313)
chr3 (19-101)||(37466291-37466375)
chr3 (197-259)||(23392106-23392166)
chr3 (197-259)||(24694963-24695023)
chr3 (197-259)||(26928396-26928456)
chr3 (197-259)||(36029322-36029382)
chr3 (197-259)||(40592579-40592639)
chr3 (40-113)||(40844674-40844748)
chr3 (49-86)||(53894082-53894119)
chr3 (19-101)||(3328359-3328443)
chr3 (200-259)||(21711454-21711511)
chr3 (200-259)||(23410529-23410586)
chr3 (197-276)||(32143552-32143629)
chr3 (23-82)||(38210569-38210629)
chr3 (197-256)||(47923704-47923761)
chr3 (23-82)||(50494198-50494258)
[»] scaffold0355 (2 HSPs)
scaffold0355 (19-232)||(9514-9726)
scaffold0355 (105-279)||(3671-3845)
[»] scaffold0464 (1 HSPs)
scaffold0464 (19-261)||(364-605)
[»] scaffold0197 (2 HSPs)
scaffold0197 (19-248)||(14161-14393)
scaffold0197 (19-248)||(19017-19249)
[»] scaffold0259 (1 HSPs)
scaffold0259 (19-248)||(2103-2335)
[»] scaffold0028 (1 HSPs)
scaffold0028 (19-248)||(148808-149040)
[»] scaffold0188 (4 HSPs)
scaffold0188 (18-197)||(17869-18049)
scaffold0188 (18-197)||(23962-24142)
scaffold0188 (197-276)||(17739-17818)
scaffold0188 (197-276)||(23832-23911)
[»] scaffold0009 (2 HSPs)
scaffold0009 (19-87)||(181980-182048)
scaffold0009 (154-248)||(176829-176925)
[»] scaffold0140 (2 HSPs)
scaffold0140 (18-113)||(8420-8517)
scaffold0140 (197-276)||(8208-8285)
[»] scaffold0036 (1 HSPs)
scaffold0036 (20-113)||(85684-85779)
[»] scaffold0087 (3 HSPs)
scaffold0087 (18-113)||(43962-44059)
scaffold0087 (18-113)||(36833-36930)
scaffold0087 (197-259)||(36640-36700)
[»] scaffold0006 (4 HSPs)
scaffold0006 (19-104)||(5683-5770)
scaffold0006 (19-104)||(2492-2579)
scaffold0006 (49-113)||(133281-133346)
scaffold0006 (197-276)||(133070-133147)
[»] scaffold0148 (1 HSPs)
scaffold0148 (19-113)||(10729-10826)
[»] scaffold0098 (1 HSPs)
scaffold0098 (49-101)||(45284-45337)
[»] scaffold0154 (1 HSPs)
scaffold0154 (49-82)||(11500-11533)
[»] scaffold0267 (1 HSPs)
scaffold0267 (23-82)||(269-329)


Alignment Details
Target: chr6 (Bit Score: 242; Significance: 1e-134; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 19 - 276
Target Start/End: Complemental strand, 14737660 - 14737403
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 118  Q
    ||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14737660 aagattgttgatccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 14737561  T
Q  119 gccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgttt 218  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14737560 gccttcaagctttacatatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgttt 14737461  T
Q  219 ttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14737460 ttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 14737403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 19 - 279
Target Start/End: Complemental strand, 22010781 - 22010520
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctct 117  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22010781 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactct 22010682  T
Q  118 agccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  22010681 agccttcaagctttacacatgaacaaaccctagattctaccctttgatatttccccactctcacaatatgaaccctaaaacccaaggtgattacaatgtt 22010582  T
Q  218 tttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgcta 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22010581 tttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgcta 22010520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 19 - 279
Target Start/End: Original strand, 11856975 - 11857236
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctct 117  Q
    ||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11856975 aagattgttgacccagttcagccaatatggcctaatatgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactct 11857074  T
Q  118 agccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  11857075 agccttcaagctttacacatgaacaaaccctagattctaccctttggtgtttccccactctcacaatatgaaccctaaaacccaaggtgattacaatgtt 11857174  T
Q  218 tttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgcta 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11857175 tttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgcta 11857236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 19 - 276
Target Start/End: Complemental strand, 14742520 - 14742263
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 118  Q
    ||||||||| |||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14742520 aagattgttgacccagttcagccaatatgacctaatttgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 14742421  T
Q  119 gccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgttt 218  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14742420 gccttcaagctttacatatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaagtgattacaatgttt 14742321  T
Q  219 ttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14742320 ttcccaacccaagagacactctcaacaaagacacttaacccattggttccctcctttg 14742263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 19 - 267
Target Start/End: Original strand, 28184506 - 28184757
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 118  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  28184506 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatctaatatgagaaagtgttacaaaaggttacaacactcta 28184605  T
Q  119 gccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgttt 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  28184606 gccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattactatgttt 28184705  T
Q  219 tt---cccaacccaagagacactctcaacaaagacactcaacccattggttc 267  Q
    ||   || ||||||||||||||||||||||||||| ||||||||||| ||||    
T  28184706 ttttcccaaacccaagagacactctcaacaaagaccctcaacccatttgttc 28184757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 28155653 - 28155412
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||    
T  28155653 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaattta 28155554  T
Q  119 gccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgttt 218  Q
    || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  28155553 gctttcaagctttacacatgaacaaaccctaga-tctaccctttggtattttcccactctcacactatgaaccctaaatcccaaggtgattacaatgttt 28155455  T
Q  219 ttcccaacccaagagacactctcaacaaagacactcaacccat 261  Q
    ||||||||| |||| ||||||||| ||||| ||| || |||||    
T  28155454 ttcccaacctaagaaacactctcatcaaaggcacacaccccat 28155412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 6438502 - 6438743
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 118  Q
    |||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  6438502 aagattgttgtcccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaa-gtgttacaaaaggttacaagactcta 6438600  T
Q  119 gcct-tcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt 217  Q
    || | |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  6438601 gcttgtcaagctttacacatgaacaaaccctagaa-ctaccctttggtattttcccactctcacactatgaacccaaaatcccaaggtgattacaatgtt 6438699  T
Q  218 tttcccaacccaagagacactctcaacaaagacactcaacccat 261  Q
    |||||||||| |||| || |||||| ||||| ||| || |||||    
T  6438700 tttcccaacctaagaaactctctcatcaaaggcacacaccccat 6438743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 19 - 248
Target Start/End: Original strand, 16838745 - 16838977
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactct 117  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||    
T  16838745 aagattgttgacccagttcagccaatgtggcttaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatct 16838844  T
Q  118 agc-cttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgt 216  Q
    |||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||    
T  16838845 agctattcaagctttacacatgaacaaaccctaga-tctaccctttggtattttcccatcctcacactatgaaccctaaatcccaaggtgattacaatgt 16838943  T
Q  217 --ttttcccaacccaagagacactctcaacaaag 248  Q
      ||||||||||| |||| ||||||||| |||||    
T  16838944 tgttttcccaacctaagatacactctcatcaaag 16838977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 19 - 248
Target Start/End: Original strand, 6005418 - 6005650
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactct 117  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||    
T  6005418 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatct 6005517  T
Q  118 agc-cttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgt 216  Q
    |||  ||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||  || |||||||||||||||||||    
T  6005518 agcttttcaagctttacacatgaacaaaccctaga-cctaccctttggtattttcccaccctcacactatgaacccataatcccaaggtgattacaatgt 6005616  T
Q  217 --ttttcccaacccaagagacactctcaacaaag 248  Q
      ||||||||||| |||| ||||||||| |||||    
T  6005617 tgttttcccaacctaagaaacactctcatcaaag 6005650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 19 - 248
Target Start/End: Complemental strand, 33330529 - 33330297
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactct 117  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||    
T  33330529 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatct 33330430  T
Q  118 agcct-tcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgt 216  Q
    ||| | |||||||||||||||||  |||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||    
T  33330429 agcttatcaagctttacacatgacaaaaccctaga-tctaccctttggtattttcccatcctcacactatgaaccctaaatcccaaggtgattacaatgt 33330331  T
Q  217 --ttttcccaacccaagagacactctcaacaaag 248  Q
      ||||||||||| |||| ||||||||| |||||    
T  33330330 tgttttcccaacctaagaaacactctcatcaaag 33330297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 19 - 248
Target Start/End: Complemental strand, 33336026 - 33335794
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactct 117  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||    
T  33336026 aagattgttgacccagttcagccaatgtgacctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatct 33335927  T
Q  118 agcct-tcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgt 216  Q
    ||| | |||||||||||||||||  |||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||    
T  33335926 agcttatcaagctttacacatgacaaaaccctaga-tctaccctttggtattttcccatcctcacactatgaaccctaaatcccaaggtgattacaatgt 33335828  T
Q  217 --ttttcccaacccaagagacactctcaacaaag 248  Q
      ||||||||||| |||| ||||||||| |||||    
T  33335827 tgttttcccaacctaagaaacactctcatcaaag 33335794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 20 - 197
Target Start/End: Complemental strand, 5674865 - 5674685
Alignment:
Q  20 agattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--actc 116  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||  ||      
T  5674865 agattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaacaa 5674766  T
Q  117 tagccttcaagctttacacatg-aacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
    |||| | ||||| ||||||| | |||||  |||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  5674765 tagcttgcaagc-ttacacaagaaacaagacctagattctaccctttggtgtttccccactctcacaatatgaaccctaaaa 5674685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 197 - 276
Target Start/End: Complemental strand, 5674633 - 5674554
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  5674633 acccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttg 5674554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 5757576 - 5757479
Alignment:
Q  18 aaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 113  Q
    |||||||||| ||||||||| | ||||| || |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  5757576 aaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 5757479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 21356035 - 21356132
Alignment:
Q  18 aaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 113  Q
    |||||||||| ||||||||| | ||||| || |||||||||| ||||||||||||||||||||||| ||||| ||||||||||| ||  |||||||||    
T  21356035 aaagattgttgacccagttcggtccaatatgacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttactaagagttacaaga 21356132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 4629949 - 4630040
Alignment:
Q  14 catcaaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaa 103  Q
    |||||||||||||| || |||||||| ||||| || |||||||| ||| ||||||||||||||||||||| || || |||||||||||||||    
T  4629949 catcaaagattgttgactcagttcagtccaatatgacctaatctagggaagagagcagctctccaatccactaagatgaaagtgttacaaaa 4630040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 10077262 - 10077176
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaa 103  Q
    ||||||||| ||||| ||| | ||||| || ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||    
T  10077262 aagattgttgacccaattcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaa 10077176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 5572338 - 5572241
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    ||||||||| ||||| ||| | ||||| || |||||||| |||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  5572338 aagattgttgacccaattcggtccaatatgacctaatctaggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaaga 5572241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 31086570 - 31086485
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaa 102  Q
    ||||||||| ||||||||||| ||||| ||  ||||||| |||||||||||| |||||||||||| ||||| ||||||||||||||    
T  31086570 aagattgttgacccagttcagtccaatatgatctaatctaggggagagagcaactctccaatccactatgatgaaagtgttacaaa 31086485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 22709050 - 22709102
Alignment:
Q  50 ctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 101  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  22709050 ctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaa 22709102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 5343482 - 5343527
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggaga 64  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||    
T  5343482 aagattgttgacccagttcagccaatgtggcctaatctaggggaga 5343527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 21801429 - 21801344
Alignment:
Q  31 ccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    ||||||||| ||||| || ||||||||||||||| |||||||||||||||||| || ||  ||||||||||||||| |||||||||    
T  21801429 ccagttcagtccaatatgacctaatctgggggagcgagcagctctccaatccactaagataaaagtgttacaaaagagttacaaga 21801344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 31979513 - 31979610
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    ||||||||| ||||||||| | ||||| || | ||||||||||||||||||||| |||||||||| || || ||||||||| |||||| |||||||||    
T  31979513 aagattgttgacccagttcggtccaatatgacataatctgggggagagagcagccctccaatccactaagatgaaagtgttgcaaaagagttacaaga 31979610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 248
Target Start/End: Original strand, 5343628 - 5343710
Alignment:
Q  168 tttcccactctcacactatgaaccctaaaacccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 248  Q
    |||||||  ||||||||||||||||  || |||||||||||||||||||  ||||||||||| ||||  |||||||| |||||    
T  5343628 tttcccaacctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagattcactctcatcaaag 5343710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 18232867 - 18232942
Alignment:
Q  40 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    ||||| || ||||||||||||||||||||| | ||||||| || ||||| |||||||||||||||| |||||||||    
T  18232867 ccaatatgacctaatctgggggagagagcaaccctccaattcactatgatgaaagtgttacaaaagagttacaaga 18232942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 113
Target Start/End: Original strand, 22963739 - 22963796
Alignment:
Q  58 ggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    |||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  22963739 ggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaaga 22963796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 23824654 - 23824597
Alignment:
Q  58 ggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    |||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  23824654 ggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaaga 23824597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 5017364 - 5017304
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 259  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  5017364 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 5017304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 276
Target Start/End: Original strand, 22709241 - 22709316
Alignment:
Q  199 ccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    |||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    |||||||||||||    
T  22709241 ccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctagagttccctcctttg 22709316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 22709116 - 22709188
Alignment:
Q  124 caagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
    ||||||| ||||| ||||||  ||||| |||||||| || || ||| |||||||||||| ||||||||||||||    
T  22709116 caagctt-acacaagaacaagtcctagtttctacccatttgtgtttccccactctcacaatatgaaccctaaaa 22709188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 5017566 - 5017482
Alignment:
Q  19 aagattgttcacccagttcagccaa-tgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 101  Q
    ||||||||| ||||||||| | ||| | || |||||||| |||||||||||| | |||||||| | ||||| |||||||||||||    
T  5017566 aagattgttgacccagttcggtcaaatatgacctaatctaggggagagagcaaccctccaatctactatgatgaaagtgttacaa 5017482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 12195515 - 12195575
Alignment:
Q  23 ttgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatcca 82  Q
    ||||| ||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  12195515 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 12195575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 31936587 - 31936651
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatcca 82  Q
    ||||||||| ||| ||||| | ||||| || |||| |||||| ||||||||||||||||||||||    
T  31936587 aagattgttgacctagttcggtccaatatgacctagtctgggagagagagcagctctccaatcca 31936651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 242; Significance: 1e-134; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 19 - 279
Target Start/End: Original strand, 41398237 - 41398498
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 118  Q
    ||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41398237 aagattgttgacccaggtcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 41398336  T
Q  119 gccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgttt 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41398337 gccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgttt 41398436  T
Q  219 ttcccaacccaagagacactctcaacaaagacactcaaccca-ttggttccctcctttgcta 279  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  41398437 ttcccaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttgcta 41398498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 19 - 279
Target Start/End: Original strand, 41390582 - 41390843
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 118  Q
    ||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41390582 aagattgttgacccagatcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 41390681  T
Q  119 gccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgttt 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41390682 gccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgttt 41390781  T
Q  219 ttcccaacccaagagacactctcaacaaagacactcaaccca-ttggttccctcctttgcta 279  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  41390782 ttcccaacccaagagacactctcaacaaagacactcaatccatttggttccctcctttgcta 41390843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 25445173 - 25444931
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 118  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25445173 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 25445074  T
Q  119 gcct-tcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt 217  Q
    || | |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25445073 gcttatcaagctttacacatgaacaaaccctaga-gctaccctttggtattttcccactctcacactatgaaccctaaatcccaaggtgattacaatgtt 25444975  T
Q  218 tttcccaacccaagagacactctcaacaaagacactcaacccat 261  Q
    |||||||||| |||| || |||||| ||||| ||| || |||||    
T  25444974 tttcccaacctaagaaactctctcatcaaaggcacacaccccat 25444931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 39445501 - 39445742
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 118  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  39445501 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaa-gtgttacaaaaggttacaagactcta 39445599  T
Q  119 gcct-tcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt 217  Q
    || | |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  39445600 gcttatcaagctttacacatgaacaaaccctagaa-ctaccctttggtattttcccactctcacactatgaacccaaaatcccaaggtgattacaatgtt 39445698  T
Q  218 tttcccaacccaagagacactctcaacaaagacactcaacccat 261  Q
    |||||||||| |||| || |||||| ||||| ||| || |||||    
T  39445699 tttcccaacctaagaaactctctcatcaaaggcacacaccccat 39445742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 44023957 - 44023716
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 118  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  44023957 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaa-gtgttacaaaaggttacaagactcta 44023859  T
Q  119 gcct-tcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt 217  Q
    || | |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  44023858 gcttgtcaagctttacacatgaacaaaccctagaa-ctaccctttggtattttcccactctcacactatgaacccaaaatcccaaggtgattacaatgtt 44023760  T
Q  218 tttcccaacccaagagacactctcaacaaagacactcaacccat 261  Q
    |||||||||| |||| || |||||| ||||| ||| || |||||    
T  44023759 tttcccaacctaagaaactctctcatcaaaggcacacaccccat 44023716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 1055095 - 1054854
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 118  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  1055095 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcaactctccaatccaatatgtgaa-gtgttacaaaaggttacaagactcta 1054997  T
Q  119 gcct-tcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt 217  Q
    || | |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  1054996 gcttatcaagctttacacatgaacaaaccctagaa-ctaccctttggtattttcccactctcacactatgaacccaaaatcccaaggtgattacaatgtt 1054898  T
Q  218 tttcccaacccaagagacactctcaacaaagacactcaacccat 261  Q
    |||||||||| |||| || |||||| ||||| ||| || |||||    
T  1054897 tttcccaacctaagaaactctctcatcaaaggcacacaccccat 1054854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 19 - 248
Target Start/End: Complemental strand, 43988548 - 43988314
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactct 117  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||    
T  43988548 aagattgtttacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatct 43988449  T
Q  118 agcct-tcaagctttacacatg--aacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaat 214  Q
    ||| | |||||||||||||| |  || |||||||||| |||||||||||| |||||||||  ||||||||||||||||  || |||||||||||||||||    
T  43988448 agcttatcaagctttacacaagacaaaaaaccctaga-tctaccctttggcattttcccatcctcacactatgaacccataatcccaaggtgattacaat 43988350  T
Q  215 gt--ttttcccaacccaagagacactctcaacaaag 248  Q
    ||  ||||||||||| |||| ||||||||| |||||    
T  43988349 gttgttttcccaacctaagaaacactctcatcaaag 43988314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 19 - 197
Target Start/End: Complemental strand, 24787460 - 24787280
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag--actc 116  Q
    ||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||  ||      
T  24787460 aagattgttgacccagttcagccaatatggcctaatctgggggggagagcagctctccaatccaatatgagaaagtgttacaaagggttacaagaaacaa 24787361  T
Q  117 tagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
    |||||||||||| ||||||| ||||||| |||||||||||||||||||| ||| || ||||||||| ||||||||||||||    
T  24787360 tagccttcaagcattacacaagaacaaatcctagattctaccctttggtgtttcccaactctcacaatatgaaccctaaaa 24787280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 123 - 261
Target Start/End: Complemental strand, 25439875 - 25439738
Alignment:
Q  123 tcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcc 222  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25439875 tcaagctttacacatgaacaaaccctagag-ctaccctttggtattttcccactctcacactatgaaccctaaatcccaaggtgattacaatgtttttcc 25439777  T
Q  223 caacccaagagacactctcaacaaagacactcaacccat 261  Q
    ||||| |||| || |||||| ||||| ||| || |||||    
T  25439776 caacctaagaaactctctcatcaaaggcacacaccccat 25439738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 18 - 197
Target Start/End: Complemental strand, 24202866 - 24202686
Alignment:
Q  18 aaagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-act 115  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| |      
T  24202866 aaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaa 24202767  T
Q  116 ctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
     |||| | ||||| ||||||| ||||||  |||||||||||||| || || ||| |||||||||||| ||||||||||||||    
T  24202766 atagcttgcaagc-ttacacaagaacaagacctagattctacccatttgtgtttccccactctcacaatatgaaccctaaaa 24202686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 18 - 197
Target Start/End: Complemental strand, 19358940 - 19358760
Alignment:
Q  18 aaagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-act 115  Q
    |||||||||| ||||||||||| |||| || |||||| ||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| |      
T  19358940 aaagattgttgacccagttcagtcaatatgacctaatatgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaa 19358841  T
Q  116 ctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
     |||| | ||||| ||||||| ||||||  |||||||||||||| || || ||| ||||||||| || ||||||||||||||    
T  19358840 atagcttgcaagc-ttacacaagaacaagacctagattctacccatttgtgtttccccactctctcaatatgaaccctaaaa 19358760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 198 - 276
Target Start/End: Complemental strand, 24787226 - 24787148
Alignment:
Q  198 cccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24787226 cccaaggtgattataatgtttttcccaacccaagagacactctcaacaaagacactcaaccctttggttccctcctttg 24787148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 197
Target Start/End: Complemental strand, 19361529 - 19361349
Alignment:
Q  18 aaagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-act 115  Q
    |||||||||| ||||||||||| |||| || |||||| ||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| |      
T  19361529 aaagattgttgacccagttcagtcaatatgacctaatatgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaa 19361430  T
Q  116 ctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
     |||  | ||||| ||||||| ||||||  |||||||||||||| || || ||| ||||||||| || ||||||||||||||    
T  19361429 atagtttgcaagc-ttacacaagaacaagacctagattctacccatttgtgtttccccactctctcaatatgaaccctaaaa 19361349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 197
Target Start/End: Complemental strand, 19380169 - 19379989
Alignment:
Q  18 aaagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-act 115  Q
    |||||||||| ||||||||||| |||| || |||||| ||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| |      
T  19380169 aaagattgttgacccagttcagtcaatatgacctaatatgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaa 19380070  T
Q  116 ctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
     |||  | ||||| ||||||| ||||||  |||||||||||||| || || ||| ||||||||| || ||||||||||||||    
T  19380069 atagtttgcaagc-ttacacaagaacaagacctagattctacccatttgtgtttccccactctctcaatatgaaccctaaaa 19379989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 197 - 276
Target Start/End: Complemental strand, 24202635 - 24202556
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    |||||||||||||    
T  24202635 acccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctaaagttccctcctttg 24202556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 26644995 - 26644898
Alignment:
Q  18 aaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 113  Q
    |||||||||| ||||||||| | ||||| || |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  26644995 aaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccattatgatgaaagtgttacaaagagttacaaga 26644898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 19072926 - 19073025
Alignment:
Q  17 caaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    ||||||||||| ||||||||| | ||||| || |||||||||||||||||||||||||||||||||| || || |||||||||||||||| |||||||||    
T  19072926 caaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactaagatgaaagtgttacaaaagagttacaaga 19073025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 19120816 - 19120915
Alignment:
Q  17 caaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    ||||||||||| ||||||||| | ||||| || |||||||||||||||||||||||||||||||||| || || |||||||||||||||| |||||||||    
T  19120816 caaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactaagatgaaagtgttacaaaagagttacaaga 19120915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 47704033 - 47703946
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 104  Q
    ||||||||| ||||||||| | ||||| || |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  47704033 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaag 47703946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 27104438 - 27104372
Alignment:
Q  49 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  27104438 cctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaaga 27104372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 3281707 - 3281804
Alignment:
Q  18 aaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 113  Q
    ||||||| || ||||||||| | ||||| || ||||||||||||||||||||||||||||||||||  |||| ||||||||||||||  |||||||||    
T  3281707 aaagattattgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccacgatgatgaaagtgttacaaagagttacaaga 3281804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 16124613 - 16124516
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    ||||||||| || |||||| | ||||| || ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  16124613 aagattgttgactcagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaaga 16124516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 9476261 - 9476348
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 104  Q
    ||||||||| ||||||||| | ||||| || |||||||| ||||||||||||||||||||||||| ||||| |||||| |||||||||    
T  9476261 aagattgttgacccagttcggtccaatatgacctaatctaggggagagagcagctctccaatccactatgatgaaagtattacaaaag 9476348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 13598398 - 13598485
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 104  Q
    ||||||||| ||||||||| | ||||| || ||||||||||||||||||||||| || ||||||| ||||| ||||||||||||||||    
T  13598398 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagcccttcaatccactatgatgaaagtgttacaaaag 13598485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 29651811 - 29651898
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 104  Q
    |||||| || ||||||||| | ||||| || ||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  29651811 aagatttttgacccagttcggtccaatatgacctaatctgggggagagagcagcactccaatccactatgatgaaagtgttacaaaag 29651898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 37069769 - 37069864
Alignment:
Q  18 aaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaa 111  Q
    |||||||||| ||||||||| | ||||| || ||||||||||||||||||||| |||||| ||||| ||||| ||||||||||||||  |||||||    
T  37069769 aaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcatctctccgatccactatgatgaaagtgttacaaagagttacaa 37069864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 21536635 - 21536570
Alignment:
Q  49 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 113  Q
    |||||||||||||||||||||||||||||||||| ||| | ||||||||||||||  |||||||||    
T  21536635 cctaatctgggggagagagcagctctccaatccactataatgaaagtgttacaaagagttacaaga 21536570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 775672 - 775759
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 104  Q
    ||||||||| ||||| ||| | ||||| || ||||||||||||||||||| |||||||||||||| || || ||||||||||||||||    
T  775672 aagattgttgacccaattcggtccaatatgacctaatctgggggagagagtagctctccaatccactaagatgaaagtgttacaaaag 775759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 276
Target Start/End: Complemental strand, 19366174 - 19366095
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    |||||||||| ||||||| |||||||||||||||||||  ||| | |||||||||||||||||    |||||||||||||    
T  19366174 acccaaggtgtttacaatatttttcccaacccaagagatcctcactacaaagacactcaaccctagagttccctcctttg 19366095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 13604689 - 13604624
Alignment:
Q  49 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 113  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||| |||||||||  |||||||||    
T  13604689 cctaatatgggggagagagcagctctccaatccactatgatgaaaatgttacaaagagttacaaga 13604624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 47098921 - 47098837
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 101  Q
    ||||||||| ||||||||| | ||||| || || |||||||||||||||||||| |||||||||| || || |||||||||||||    
T  47098921 aagattgttgacccagttcggtccaatatgaccgaatctgggggagagagcagccctccaatccactaagatgaaagtgttacaa 47098837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 197 - 276
Target Start/End: Complemental strand, 19361298 - 19361220
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    |||||||||| |||||||||||| ||||||||||||||  ||| | |||||||||||||||||    |||||||||||||    
T  19361298 acccaaggtgtttacaatgtttt-cccaacccaagagatcctcactacaaagacactcaaccctagagttccctcctttg 19361220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 276
Target Start/End: Complemental strand, 19358709 - 19358631
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    |||||||||| |||||||||||| |||||||||| |||  ||| | |||||||||||||||||    |||||||||||||    
T  19358709 acccaaggtgtttacaatgtttt-cccaacccaaaagatcctcactacaaagacactcaaccctagagttccctcctttg 19358631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 197
Target Start/End: Complemental strand, 19366292 - 19366225
Alignment:
Q  130 ttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
    ||||||| ||||||  |||||||||||||| || || ||| ||||||||| || ||||||||||||||    
T  19366292 ttacacaagaacaagacctagattctacccatttgtgtttccccactctctcaatatgaaccctaaaa 19366225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 47098693 - 47098633
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 259  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  47098693 acccaaggtgtttacaatgttt--cccaacccaagagaacctcgctacaaagacactcaaccc 47098633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 47102707 - 47102647
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 259  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  47102707 acccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccc 47102647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 258
Target Start/End: Original strand, 3281936 - 3281995
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacc 258  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | ||||||||||||||||    
T  3281936 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaacc 3281995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 101
Target Start/End: Original strand, 32889461 - 32889523
Alignment:
Q  40 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 101  Q
    ||||| || |||| ||||||||| ||||||||||||||||||| || || |||||||||||||    
T  32889461 ccaatatgacctagtctgggggatagagcagctctccaatccactaagatgaaagtgttacaa 32889523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 9459419 - 9459479
Alignment:
Q  23 ttgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatcca 82  Q
    ||||| ||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  9459419 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 9459479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 9463246 - 9463306
Alignment:
Q  23 ttgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatcca 82  Q
    ||||| ||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  9463246 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 9463306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 276
Target Start/End: Complemental strand, 13604490 - 13604413
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | ||||||| |||||||||    |||||||||||||    
T  13604490 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagatactcaaccctaaagttccctcctttg 13604413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 16226446 - 16226386
Alignment:
Q  23 ttgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatcca 82  Q
    ||||| ||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  16226446 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 16226386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 258
Target Start/End: Original strand, 37069998 - 37070055
Alignment:
Q  199 ccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacc 258  Q
    |||||||| |||||||||||  ||||||||||||||  ||| | ||||||||||||||||    
T  37069998 ccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaacc 37070055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 238; Significance: 1e-132; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 19 - 279
Target Start/End: Complemental strand, 1457246 - 1456985
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctct 117  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1457246 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactct 1457147  T
Q  118 agccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  1457146 agccttcaagctttacacatgaacaaaccctagattctaccctttggtgtttccccactctcacaatatgaaccctaaaacccaaggtgattacaatgtt 1457047  T
Q  218 tttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgcta 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1457046 tttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgcta 1456985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 19 - 279
Target Start/End: Original strand, 15044687 - 15044948
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 118  Q
    ||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15044687 aagattgttgacccagttcagccaatatggcctaatatgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 15044786  T
Q  119 gccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgttt 218  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15044787 gctttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgttt 15044886  T
Q  219 ttccc-aacccaagagacactctcaacaaagacactcaacccattggttccctcctttgcta 279  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15044887 ttcccaaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgcta 15044948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 19 - 279
Target Start/End: Original strand, 43592280 - 43592541
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctct 117  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  43592280 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactct 43592379  T
Q  118 agccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||  | ||||||||||||||||||||||||||||||||||    
T  43592380 agccttcaagctttacacatgaacaaaccctagattctaccctttggtgtttccccactctcttaatatgaaccctaaaacccaaggtgattacaatgtt 43592479  T
Q  218 tttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgcta 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43592480 tttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgcta 43592541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 19 - 279
Target Start/End: Original strand, 27449815 - 27450076
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctct 117  Q
    ||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27449815 aagattgttgacccagttcagccaatatagcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactct 27449914  T
Q  118 agccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||  | ||||||||||||||||||||||||||||||||||    
T  27449915 agccttcaagctttacacatgaacaaaccctagattctaccctttggtgtttccccactctcttaatatgaaccctaaaacccaaggtgattacaatgtt 27450014  T
Q  218 tttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgcta 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27450015 tttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgcta 27450076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 19 - 279
Target Start/End: Original strand, 27444971 - 27445232
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctct 117  Q
    ||||||||| ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27444971 aagattgttgacccagttcaggcaatatagcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactct 27445070  T
Q  118 agccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||  | ||||||||||||||||||||||||||||||||||    
T  27445071 agccttcaagctttacacatgaacaaaccctagattctaccctttggtgtttccccactctcttaatatgaaccctaaaacccaaggtgattacaatgtt 27445170  T
Q  218 tttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgcta 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27445171 tttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgcta 27445232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 31 - 279
Target Start/End: Original strand, 43598737 - 43598986
Alignment:
Q  31 ccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagct 129  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  43598737 ccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagct 43598836  T
Q  130 ttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaccca 229  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||    
T  43598837 ttacacatgaacaaaccctagattctaccctttggtgtttccccactctcttaatatgaaccctaaaacccaaggtgattacaatgtttttcccaaccca 43598936  T
Q  230 agagacactctcaacaaagacactcaacccattggttccctcctttgcta 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43598937 agagacactctcaacaaagacactcaacccattggttccctcctttgcta 43598986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 31 - 279
Target Start/End: Original strand, 43604229 - 43604478
Alignment:
Q  31 ccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagct 129  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  43604229 ccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagct 43604328  T
Q  130 ttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaccca 229  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||    
T  43604329 ttacacatgaacaaaccctagattctaccctttggtgtttccccactctcttaatatgaaccctaaaacccaaggtgattacaatgtttttcccaaccca 43604428  T
Q  230 agagacactctcaacaaagacactcaacccattggttccctcctttgcta 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43604429 agagacactctcaacaaagacactcaacccattggttccctcctttgcta 43604478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 31 - 279
Target Start/End: Original strand, 43609721 - 43609970
Alignment:
Q  31 ccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctctagccttcaagct 129  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  43609721 ccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagct 43609820  T
Q  130 ttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtttttcccaaccca 229  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||    
T  43609821 ttacacatgaacaaaccctagattctaccctttggtgtttccccactctcttaatatgaaccctaaaacccaaggtgattacaatgtttttcccaaccca 43609920  T
Q  230 agagacactctcaacaaagacactcaacccattggttccctcctttgcta 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43609921 agagacactctcaacaaagacactcaacccattggttccctcctttgcta 43609970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 19 - 248
Target Start/End: Complemental strand, 28807656 - 28807429
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||    
T  28807656 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaa-gtgttacaaaaggttacaagaatcta 28807558  T
Q  119 gccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgttt 218  Q
    || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  28807557 gctttcaagctttacacatgaacaaaccctagat-ctaccctttggtattttcccactctcacactatgaacccaaaatcccaaggtgattacaatgttt 28807459  T
Q  219 ttcccaacccaagagacactctcaacaaag 248  Q
    ||||||||| |||| ||||||||| |||||    
T  28807458 ttcccaacctaagaaacactctcatcaaag 28807429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 19 - 248
Target Start/End: Complemental strand, 37556706 - 37556478
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||    
T  37556706 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaaagtgttacaaaaggttacaagtatcta 37556607  T
Q  119 gcct-tcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt 217  Q
    || | |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |    
T  37556606 gcttatcaagctttacacatgaacaaaccctaga-actaccctttggtattttcccactctcacactatgaacccaaaatcccaaggtgattacaatg-t 37556509  T
Q  218 tttcccaacccaagagacactctcaacaaag 248  Q
    |||||||||| |||| |||||| || |||||    
T  37556508 tttcccaacctaagaaacactcacatcaaag 37556478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 19 - 248
Target Start/End: Complemental strand, 37561528 - 37561300
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||    
T  37561528 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaaagtgttacaaaaggttacaagtatcta 37561429  T
Q  119 gcct-tcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt 217  Q
    || | |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |    
T  37561428 gcttatcaagctttacacatgaacaaaccctaga-actaccctttggtattttcccactctcacactatgaacccaaaatcccaaggtgattacaatg-t 37561331  T
Q  218 tttcccaacccaagagacactctcaacaaag 248  Q
    |||||||||| |||| |||||| || |||||    
T  37561330 tttcccaacctaagaaacactcacatcaaag 37561300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 19 - 248
Target Start/End: Original strand, 2785376 - 2785608
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactct 117  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||    
T  2785376 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatct 2785475  T
Q  118 agc-cttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgt 216  Q
    |||  |||||||||||| |||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||  || |||||||||||||||||||    
T  2785476 agcttttcaagctttactcatgaacaaaccctaga-cctaccctttggtattttcccaccctcacactatgaacccataatcccaaggtgattacaatgt 2785574  T
Q  217 --ttttcccaacccaagagacactctcaacaaag 248  Q
      ||||||||||| |||| ||||||||| |||||    
T  2785575 tgttttcccaacctaagaaacactctcatcaaag 2785608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 19 - 248
Target Start/End: Original strand, 33791317 - 33791549
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactct 117  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||    
T  33791317 aagattgttgacccagttcagccaatgtggcctaatctgggggaaagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatct 33791416  T
Q  118 agc-cttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgt 216  Q
    |||  ||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||  || |||||||||||||||||||    
T  33791417 agcttttcaagctttacacatgaacaaaccctaga-cctaccctttggtattttcccaccctcacactatgaacccataatcccaaggtgattacaatgt 33791515  T
Q  217 --ttttcccaacccaagagacactctcaacaaag 248  Q
      ||||||||||| |||| ||||||||| |||||    
T  33791516 tgttttcccaacctaagaaacactctcatcaaag 33791549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 19 - 196
Target Start/End: Original strand, 30631407 - 30631586
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag--actc 116  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||    
T  30631407 aagattgttgactcagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaagggttacaagaaactc 30631506  T
Q  117 tagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaa 196  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||| |||||||||||||    
T  30631507 tagccttcaagctttacacatgaacaaaccatagattctaccctttggtgtttccccactctcacaatatgaaccctaaa 30631586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 197
Target Start/End: Original strand, 31180215 - 31180394
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag--actc 116  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||    
T  31180215 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaagggttacaagaaactc 31180314  T
Q  117 tagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||| ||| |||||||||||| |||||||| |||||    
T  31180315 tagccttcaagctttacacaag-acaaaccctagattctaccctttggtgtttccccactctcacaatatgaaccataaaa 31180394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 19 - 248
Target Start/End: Complemental strand, 31397077 - 31396843
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactct 117  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||    
T  31397077 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatct 31396978  T
Q  118 agcct-tcaagctttacacatg--aacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaat 214  Q
    ||| | |||||||||||||| |  || |||||||||| |||||||||||| |||||||||  ||||||||||||||||  || |||||||||||||||||    
T  31396977 agcttatcaagctttacacaagacaaaaaaccctaga-tctaccctttggcattttcccatcctcacactatgaacccataatcccaaggtgattacaat 31396879  T
Q  215 gt--ttttcccaacccaagagacactctcaacaaag 248  Q
    ||  ||||||||||| |||| ||||||||| |||||    
T  31396878 gttgttttcccaacctaagatacactctcatcaaag 31396843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 19 - 248
Target Start/End: Complemental strand, 31401934 - 31401700
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactct 117  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||    
T  31401934 aagattgttgacccagttcagccaatgtggcctaatatgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatct 31401835  T
Q  118 agcct-tcaagctttacacatg--aacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaat 214  Q
    ||| | |||||||||||||| |  || |||| ||||| |||||||||||| |||||||||  ||||||||||||||||  || |||||||||||||||||    
T  31401834 agcttatcaagctttacacaagacaaaaaactctaga-tctaccctttggcattttcccatcctcacactatgaacccataatcccaaggtgattacaat 31401736  T
Q  215 gt--ttttcccaacccaagagacactctcaacaaag 248  Q
    ||  ||||||||||| |||| ||||||||| |||||    
T  31401735 gttgttttcccaacctaagatacactctcatcaaag 31401700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 19 - 248
Target Start/End: Original strand, 33768180 - 33768417
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactct 117  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||    
T  33768180 aagattgttgacccagttcagccaatgtggcctaatctgggggggagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatct 33768279  T
Q  118 agc-cttcaagctttacacatgaacaaaccctagattctacccttt--ggtattttccc-actc--tcacactatgaaccctaaaacccaaggtgattac 211  Q
    |||  ||||||||||||||||||||||||||||||  |||||||||  | ||||||||| || |   |||||||||||||   || ||||||||||||||    
T  33768280 agcttttcaagctttacacatgaacaaaccctaga-cctaccctttcggttattttccctacccctccacactatgaaccaataatcccaaggtgattac 33768378  T
Q  212 aatgt--ttttcccaacccaagagacactctcaacaaag 248  Q
    |||||  ||||||||||| |||| ||||||||| |||||    
T  33768379 aatgttgttttcccaacctaagaaacactctcatcaaag 33768417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 18 - 197
Target Start/End: Original strand, 38192173 - 38192353
Alignment:
Q  18 aaagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-act 115  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| |      
T  38192173 aaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaa 38192272  T
Q  116 ctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
     |||| | ||||| ||||||| ||||||  ||||| |||||||| || || ||| |||||||||||| ||||||||||||||    
T  38192273 atagcttgcaagc-ttacacaagaacaagtcctagtttctacccatttgtgtttccccactctcacaatatgaaccctaaaa 38192353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 18 - 197
Target Start/End: Original strand, 38219398 - 38219578
Alignment:
Q  18 aaagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-act 115  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| |      
T  38219398 aaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaa 38219497  T
Q  116 ctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
     |||| | ||||| ||||||| ||||||  ||||| |||||||| || || ||| |||||||||||| ||||||||||||||    
T  38219498 atagcttgcaagc-ttacacaagaacaagtcctagtttctacccatttgtgtttccccactctcacaatatgaaccctaaaa 38219578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 19 - 197
Target Start/End: Original strand, 24135849 - 24136028
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-actc 116  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||| || || || |||||||||||||| ||||||||| |       
T  24135849 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctatccaatgcactaagatgaaagtgttacaaagggttacaagaaaaa 24135948  T
Q  117 tagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
    |||| | ||||| ||||||| ||||||  |||||||||||||||||||| ||| |||||||||||| | ||||||||||||    
T  24135949 tagcttgcaagc-ttacacaagaacaagtcctagattctaccctttggtgtttccccactctcacaatgtgaaccctaaaa 24136028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 197 - 276
Target Start/End: Original strand, 30631640 - 30631719
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30631640 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 30631719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 197 - 276
Target Start/End: Original strand, 31180447 - 31180526
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  31180447 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccctttggttccctcctttg 31180526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 18 - 197
Target Start/End: Original strand, 35387662 - 35387842
Alignment:
Q  18 aaagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-act 115  Q
    |||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||| ||||||||| |      
T  35387662 aaagattgttgacccaattcagccaatatggcctaatctgggggagagagcagctctccaatctactatgatgaaagtgttacaaagggttacaagaaaa 35387761  T
Q  116 ctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
     |||| | ||||| ||||||| ||| ||  ||||| |||||||| || || ||| |||||||||||| ||||||||||||||    
T  35387762 atagcttgcaagc-ttacacaagaataagtcctagtttctacccatttgtgtttccccactctcacaatatgaaccctaaaa 35387842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 197 - 276
Target Start/End: Original strand, 24136080 - 24136159
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||    
T  24136080 acccaaggtgattacaatgtttttcccaacccaagagacactttctacaaagacactcaaccctttggttccctcctttg 24136159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 9353430 - 9353333
Alignment:
Q  18 aaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 113  Q
    |||||||||| ||||||||| | ||||| || |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  9353430 aaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 9353333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 36932448 - 36932351
Alignment:
Q  18 aaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 113  Q
    |||||||||| ||||||||| | ||||| || |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  36932448 aaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 36932351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 10281749 - 10281848
Alignment:
Q  17 caaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    ||||||||||| ||||||||| | ||||| || ||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  10281749 caaagattgttgacccagttcggtccaatatgacctgatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaaga 10281848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 197 - 276
Target Start/End: Original strand, 35387893 - 35387972
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||    |||||||||||||    
T  35387893 acccaaggtgattacaatgttttttccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttg 35387972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 15464531 - 15464628
Alignment:
Q  18 aaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 113  Q
    |||||||||| ||||||||| | ||||| ||  ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  15464531 aaagattgttgacccagttcggtccaatatgatctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 15464628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 11917068 - 11916972
Alignment:
Q  20 agattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    |||||||| ||||||||| | ||||| || |||||| ||||||||||||||||||||||||||| ||| | |||||||||||||||| |||||||||    
T  11917068 agattgttgacccagttcggtccaatatgacctaatatgggggagagagcagctctccaatccactataatgaaagtgttacaaaagagttacaaga 11916972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 197 - 276
Target Start/End: Original strand, 38219629 - 38219708
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    |||||||||| |||||||||||||||||||||||||||  ||| | |||||||||||||||||    |||||||||||||    
T  38219629 acccaaggtgtttacaatgtttttcccaacccaagagatcctcactacaaagacactcaaccctagagttccctcctttg 38219708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 14520229 - 14520326
Alignment:
Q  18 aaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 113  Q
    |||||||||| ||||||||| | ||||| || |||||||| |||| |||||||||||| ||||||| ||||| ||||||||||||||  |||||||||    
T  14520229 aaagattgttgacccagttcggtccaatatgacctaatctaggggggagagcagctcttcaatccactatgatgaaagtgttacaaagagttacaaga 14520326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 19588743 - 19588843
Alignment:
Q  16 tcaaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaag 112  Q
    |||||||||||| ||||||||| | ||||| ||  |||||||  ||||||||||||| |||||||||| ||||| |||||||||||||||| ||||||||    
T  19588743 tcaaagattgttgacccagttcggtccaatatgaactaatcttagggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaag 19588842  T
Q  113 a 113  Q
    |    
T  19588843 a 19588843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 3880321 - 3880396
Alignment:
Q  40 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    ||||| || ||||||||| || ||||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  3880321 ccaatatgacctaatctgaggcagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaaga 3880396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 17004057 - 17003970
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 104  Q
    ||||||||| ||||||||| | ||||| || |||||||||||||||||||||||||| ||||||| ||||| |||||| || ||||||    
T  17004057 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctcttcaatccactatgatgaaagtatttcaaaag 17003970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 12084241 - 12084176
Alignment:
Q  49 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 113  Q
    |||||| ||||| ||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  12084241 cctaatatggggcagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 12084176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 28832259 - 28832343
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 101  Q
    ||||||||| |||| |||| | ||||| || ||||||||||||||||||||||| |||||||||| || || |||||||||||||    
T  28832259 aagattgttgacccggttcggtccaatatgacctaatctgggggagagagcagccctccaatccactaagatgaaagtgttacaa 28832343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 4410301 - 4410241
Alignment:
Q  23 ttgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatcca 82  Q
    ||||| ||||||||| | ||||| || |||| |||||||||||||||||||||||||||||    
T  4410301 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagctctccaatcca 4410241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 276
Target Start/End: Complemental strand, 24553395 - 24553318
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | ||||||||||||||||| |  ||| |||||||||    
T  24553395 acccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaacccttaagttacctcctttg 24553318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 42127507 - 42127423
Alignment:
Q  19 aagattgttcacccagttc-agccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 101  Q
    ||||||||| ||||||||| | | ||| || ||||||||||||||||||||||| | |||||||| || || |||||||||||||    
T  42127507 aagattgttgacccagttcgatctaatatgacctaatctgggggagagagcagccccccaatccactaagatgaaagtgttacaa 42127423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 258
Target Start/End: Complemental strand, 11181700 - 11181641
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacc 258  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | ||||||||||||||||    
T  11181700 acccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaacc 11181641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 259
Target Start/End: Complemental strand, 7160770 - 7160712
Alignment:
Q  199 ccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 259  Q
    ||||||||||||||||||||  ||||| ||||||||  ||| | |||||||||||||||||    
T  7160770 ccaaggtgattacaatgttt--cccaatccaagagaacctcactacaaagacactcaaccc 7160712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 259
Target Start/End: Original strand, 14520461 - 14520519
Alignment:
Q  199 ccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 259  Q
    |||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  14520461 ccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 14520519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 257
Target Start/End: Original strand, 28832486 - 28832544
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaac 257  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||    
T  28832486 acccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaac 28832544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 15552524 - 15552464
Alignment:
Q  23 ttgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatcca 82  Q
    ||||| ||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  15552524 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 15552464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 31179371 - 31179431
Alignment:
Q  23 ttgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatcca 82  Q
    ||||| ||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  31179371 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 31179431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 31543013 - 31542953
Alignment:
Q  23 ttgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatcca 82  Q
    ||||| ||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  31543013 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 31542953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 31545359 - 31545299
Alignment:
Q  23 ttgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatcca 82  Q
    ||||| ||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  31545359 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 31545299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 19 - 279
Target Start/End: Complemental strand, 24024410 - 24024150
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 118  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24024410 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaatgttacaagactcta 24024311  T
Q  119 gccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgttt 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  24024310 gccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacacgatgaaccctaaaacccacggtgattacaatgttt 24024211  T
Q  219 ttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgcta 279  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24024210 ttccaaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgcta 24024150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 19 - 279
Target Start/End: Complemental strand, 31109667 - 31109406
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 118  Q
    ||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31109667 aagattgttgacccagttcagccaatatggcctaatctaggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 31109568  T
Q  119 gccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgttt 218  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31109567 gccttcaagctttgcacatgaacaaaccctagattctaccctttgatattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgttt 31109468  T
Q  219 ttcccaacccaagagacactctcaacaaagacactcaacccat-tggttccctcctttgcta 279  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  31109467 ttcccaacccaagagacactctcaacaaagacactcaacccatatggttccctcctttgcta 31109406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 19 - 279
Target Start/End: Original strand, 12396912 - 12397173
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctct 117  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12396912 aagattgttgacccagttcagccaatatggcctaatctgggggagagaacagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactct 12397011  T
Q  118 agccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt 217  Q
    |||||| || |||||||||||||||||||||||||||||||||||||| ||| |||||| ||||| ||||||||||||||||||||||||||||||||||    
T  12397012 agcctttaatctttacacatgaacaaaccctagattctaccctttggtgtttccccactatcacaatatgaaccctaaaacccaaggtgattacaatgtt 12397111  T
Q  218 tttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgcta 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12397112 tttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgcta 12397173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 19 - 271
Target Start/End: Original strand, 12406332 - 12406585
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctct 117  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12406332 aagattgttgacccagttcagccaatatggcctaatctgggggagagaatagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactct 12406431  T
Q  118 agccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||| |||||||||||||||||||    
T  12406432 agccttcaagctttacacatgaacaaaccctagattctaccctttggtgtttccccactctcacaatatgaaccctaaaagccaaggtgattacaatgtt 12406531  T
Q  218 tttcccaacccaagagacactctcaacaaagacactcaacccattggttccctc 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12406532 tttcccaacccaagagacactctcaacaaagacactcaacccattggttccctc 12406585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 19 - 248
Target Start/End: Original strand, 19992314 - 19992544
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 118  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19992314 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaaagtgttacaaaaggttacaagactcta 19992413  T
Q  119 gcct-tcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt 217  Q
    || | |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  19992414 gcttatcaagctttacacatgaacaaaccctaga-actaccctttggtattttcccactctcacactatgaacccaaaatcccaaggtgattacaatgtt 19992512  T
Q  218 ttt-cccaacccaagagacactctcaacaaag 248  Q
    ||| ||||||| |||| |||||| || |||||    
T  19992513 tttccccaacctaagaaacactcacatcaaag 19992544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 19 - 248
Target Start/End: Complemental strand, 21812322 - 21812092
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 118  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||| |||||||||||| ||||||||||    
T  21812322 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctttccaatccaatatgtg-aagtcttacaaaaggttccaagactcta 21812224  T
Q  119 gcct-tc-aagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgt 216  Q
    || | || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||    
T  21812223 gcttgtcaaagctttacacatgaacaaaccctaga-tctaccctttggtattttcccactctcacactatgaacccataatcccaaggtgattacaatgt 21812125  T
Q  217 tttt-cccaacccaagagacactctcaacaaag 248  Q
    |||| ||||||| |||| ||||||||| |||||    
T  21812124 ttttccccaacctaagaaacactctcatcaaag 21812092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 19 - 248
Target Start/End: Complemental strand, 24266286 - 24266054
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactct 117  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||    
T  24266286 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatct 24266187  T
Q  118 agcct-tcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgt 216  Q
    ||| | |||||||||||||| ||  ||||||||||  ||||||||||||| |||||||  ||||||||||||||||  || |||||||||||||||||||    
T  24266186 agcttatcaagctttacacaagacaaaaccctaga-cctaccctttggtaatttcccaacctcacactatgaacccataatcccaaggtgattacaatgt 24266088  T
Q  217 --ttttcccaacccaagagacactctcaacaaag 248  Q
      ||||||||||| |||| ||||||||| |||||    
T  24266087 tgttttcccaacctaagatacactctcatcaaag 24266054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 19 - 248
Target Start/End: Complemental strand, 24261407 - 24261175
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactct 117  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||    
T  24261407 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatct 24261308  T
Q  118 agcct-tcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgt 216  Q
    ||| | |||||||||||||| ||  ||||||||||  ||||||||||||| |||||||  ||||||||||||||||  || |||||| ||||||||||||    
T  24261307 agcttatcaagctttacacaagacaaaaccctaga-cctaccctttggtaatttcccaacctcacactatgaacccataatcccaagatgattacaatgt 24261209  T
Q  217 --ttttcccaacccaagagacactctcaacaaag 248  Q
      ||||||||||| ||||  |||||||| |||||    
T  24261208 tgttttcccaacctaagattcactctcatcaaag 24261175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 19 - 197
Target Start/End: Complemental strand, 20357643 - 20357463
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag--actc 116  Q
    ||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||      
T  20357643 aagattgttgacccagttcagccaatatggcctaatttgggggagagagcagctctccaatccaatatgagaaagtgttacaaagggttacaagaaacaa 20357544  T
Q  117 tagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
    |||||||||||||||||||| |||||  ||||||||||||||| |  || ||| |||||||||||| ||||||||||||||    
T  20357543 tagccttcaagctttacacaagaacatgccctagattctacccatatgtgtttccccactctcacaatatgaaccctaaaa 20357463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 19 - 248
Target Start/End: Original strand, 16884930 - 16885162
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||||||  ||||||||| ||||    
T  16884930 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgttttacaaagagttacaagaatcta 16885029  T
Q  119 gcct-tcaagctttacacatgaacaaaccctagattctaccctttggt-attttcccactctcacactatgaaccctaaaacccaaggtgattacaatgt 216  Q
    || | |||||||||||||| ||  ||||||||||  |||||||||| | | |||||||  ||||||||||||||||  || |||||| ||||||||||||    
T  16885030 gcttatcaagctttacacaagacaaaaccctaga-cctaccctttgataaatttcccaacctcacactatgaacccataatcccaagatgattacaatgt 16885128  T
Q  217 --ttttcccaacccaagagacactctcaacaaag 248  Q
      ||||||||||| ||||  |||||||| |||||    
T  16885129 tgttttcccaacctaagattcactctcatcaaag 16885162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 19 - 248
Target Start/End: Original strand, 16880074 - 16880306
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||||||  ||||||||| ||||    
T  16880074 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgttttacaaagagttacaagaatcta 16880173  T
Q  119 gcct-tcaagctttacacatgaacaaaccctagattctaccctttggt-attttcccactctcacactatgaaccctaaaacccaaggtgattacaatgt 216  Q
    || | |||||||||||||| ||  ||||||||||  |||||||||| | | |||||||  ||||||||||||||||  || |||||| ||||||||||||    
T  16880174 gcttatcaagctttacacaagacaaaaccctaga-cctaccctttgataaatttcccaacctcacactatgaacccataatcccaagatgattacaatgt 16880272  T
Q  217 --ttttcccaacccaagagacactctcaacaaag 248  Q
      |||| |||||| ||||  |||||||| |||||    
T  16880273 tgtttttccaacctaagattcactctcatcaaag 16880306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 19 - 197
Target Start/End: Complemental strand, 1533540 - 1533359
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--act 115  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||  ||     
T  1533540 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcatctctccaatccaatatgatgaaagtgttacaaagggttacaagaaaca 1533441  T
Q  116 ctagccttcaagctttacacatg-aacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
     |||| | ||||| ||||||| | |||||  |||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  1533440 atagcttgcaagc-ttacacaagaaacaagacctagattctaccctttggtgttttcccactctcacaatatgaaccctaaaa 1533359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 19 - 197
Target Start/End: Original strand, 2057966 - 2058147
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--act 115  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||  ||     
T  2057966 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaaca 2058065  T
Q  116 ctagccttcaagctttacacatgaacaaaccctagattctaccc-tttggtattttcccactctcacactatgaaccctaaaa 197  Q
     |||| ||||||| ||||||| |||||| ||||||||||||||| | || | ||| |||||||||||| ||||||||||||||    
T  2058066 atagcattcaagc-ttacacaagaacaagccctagattctacccatatgttgtttccccactctcacaatatgaaccctaaaa 2058147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 18 - 197
Target Start/End: Original strand, 21639808 - 21639988
Alignment:
Q  18 aaagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-act 115  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||| ||||||||| |      
T  21639808 aaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccactataatgaaagtgttacaaagggttacaagaaaa 21639907  T
Q  116 ctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
     |||| | ||||| ||||||| ||||||  |||||||||||||| || || ||| |||||||||||| ||||||||||||||    
T  21639908 atagcttgcaagc-ttacacaagaacaagacctagattctacccatttgtgtttccccactctcacaatatgaaccctaaaa 21639988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 4866731 - 4866820
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggtta 108  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4866731 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggtta 4866820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 18 - 197
Target Start/End: Original strand, 18408763 - 18408943
Alignment:
Q  18 aaagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-act 115  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| |      
T  18408763 aaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccagtatgatgaaagtgttacaaagggttacaagaaaa 18408862  T
Q  116 ctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
     || | | ||||| ||||||| ||||||  ||||| |||||||| || || ||| |||||||||||| ||||||||||||||    
T  18408863 ataacttgcaagc-ttacacaagaacaagtcctagtttctacccatttgtgtttccccactctcacaatatgaaccctaaaa 18408943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 199 - 276
Target Start/End: Original strand, 4873310 - 4873387
Alignment:
Q  199 ccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4873310 ccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 4873387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 197
Target Start/End: Original strand, 21646006 - 21646186
Alignment:
Q  18 aaagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-act 115  Q
    |||||||||| |||||||||||||||| ||||||||||| ||| ||||||||||||||||||||| ||||| |||||||||| ||| ||||||||| |      
T  21646006 aaagattgttgacccagttcagccaatatggcctaatctagggaagagagcagctctccaatccactatgatgaaagtgttaaaaagggttacaagaaaa 21646105  T
Q  116 ctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
     |||| | ||||| ||||||| ||||||  |||||||||||||| || || ||| |||||||||||| ||||||||||||||    
T  21646106 atagcttgcaagc-ttacacaagaacaagacctagattctacccatttgtgtttccccactctcacaatatgaaccctaaaa 21646186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 197 - 276
Target Start/End: Complemental strand, 20357410 - 20357331
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20357410 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccctttggttccctcctttg 20357331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 18 - 197
Target Start/End: Original strand, 18413640 - 18413819
Alignment:
Q  18 aaagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-act 115  Q
    |||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| |      
T  18413640 aaagattgttgacccagttcagccaatatggcctaatct-ggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaa 18413738  T
Q  116 ctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
     |||  | ||||| ||||||| ||||||  ||||| |||||||| || || ||| |||||||||||| ||||||||||||||    
T  18413739 atagattgcaagc-ttacacaagaacaagtcctagtttctacccatttgtgtttccccactctcacaatatgaaccctaaaa 18413819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 197 - 276
Target Start/End: Complemental strand, 1533307 - 1533228
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  1533307 acccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttg 1533228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 197 - 276
Target Start/End: Original strand, 2058202 - 2058281
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  2058202 acccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttg 2058281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 21983285 - 21983370
Alignment:
Q  20 agattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaa 103  Q
    |||||||| ||||||||| | ||||| || |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  21983285 agattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaa 21983370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 29159803 - 29159900
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    ||||||||| ||||||||| | ||||| || |||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  29159803 aagattgttgacccagttcggtccaatatgacctaatctaggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaaga 29159900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 197 - 276
Target Start/End: Original strand, 21640039 - 21640118
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    |||||||||| |||||||||||||||||||||||||||  ||||| |||||||||||||||||    |||||||||||||    
T  21640039 acccaaggtgtttacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagagttccctcctttg 21640118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 197 - 259
Target Start/End: Original strand, 21646237 - 21646299
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 259  Q
    |||||||||| |||||||||||||||||||||||||||  ||||| |||||||||||||||||    
T  21646237 acccaaggtgtttacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccc 21646299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 44848782 - 44848685
Alignment:
Q  18 aaagattgttcacccagttcagc-caatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 113  Q
    |||||||||| ||||||||| |  |||| || ||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  44848782 aaagattgttgacccagttcggttcaatatgacctaacctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 44848685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 46516407 - 46516310
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    ||||||||| ||||||||| | ||||| || |||||||| |||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  46516407 aagattgttgacccagttcggtccaatatgacctaatctaggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaaga 46516310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 49091661 - 49091758
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    ||||||||| |||||||| || ||||| || |||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||| |||||||||    
T  49091661 aagattgttgacccagtttagtccaatatgacctaatctggggaagagagcaactctccaatccactatgatgaaagtgttacaaaagagttacaaga 49091758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 197 - 276
Target Start/End: Original strand, 18408993 - 18409072
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    |||||||||| |||||||||||||||||||||||||||  ||| | |||||||||||||||||    |||||||||||||    
T  18408993 acccaaggtgtttacaatgtttttcccaacccaagagatcctcactacaaagacactcaaccctagagttccctcctttg 18409072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 2647793 - 2647696
Alignment:
Q  19 aagattgttcacccagttcagcc-aatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    ||||||||| ||||| ||| ||| ||| || |||| |||||||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  2647793 aagattgttgacccaattcggcccaatatgacctattctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaaga 2647696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 33332547 - 33332450
Alignment:
Q  19 aagattgttcacccagttc-agccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    ||||||||| ||||||||| | | ||| || ||||||||||||||||||||||| |||||||||| || || |||||||||||||||| |||||||||    
T  33332547 aagattgttgacccagttcgatctaatatgacctaatctgggggagagagcagccctccaatccactaagatgaaagtgttacaaaagagttacaaga 33332450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 9190105 - 9190021
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 101  Q
    ||||||||| ||||||||| | ||||| || |||| ||||||||||||||||||||||||||||| || || |||||||||||||    
T  9190105 aagattgttgacccagttcggtccaatatgacctagtctgggggagagagcagctctccaatccactaagatgaaagtgttacaa 9190021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 20284089 - 20284173
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 101  Q
    ||||||||| ||||||||| | ||||| || ||||||||||||||||||||||| |||||||||| || || |||||||||||||    
T  20284089 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactaagatgaaagtgttacaa 20284173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 276
Target Start/End: Original strand, 18413869 - 18413948
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    |||||||||| ||||| |||||||||||||||||||||  ||| | |||||||||||||||||    |||||||||||||    
T  18413869 acccaaggtgtttacattgtttttcccaacccaagagatcctcactacaaagacactcaaccctagagttccctcctttg 18413948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 2580390 - 2580531
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc 116  Q
    ||||||||| ||||| ||| | ||||| || |||| ||||||||||||||||||||||||||||| || || |||||||||||||   |||||||||       
T  2580390 aagattgttgacccaattcggtccaatatgacctagtctgggggagagagcagctctccaatccactaagatgaaagtgttacaatgagttacaagaaaa 2580489  T
Q  117 tagccttcaagctttacacatgaacaaaccctagattctaccc 159  Q
    |||| | ||||| ||||||| ||||||  ||||| ||||||||    
T  2580490 tagcttgcaagc-ttacacaagaacaagtcctagtttctaccc 2580531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 55948 - 56044
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    |||||| || ||||||||| | ||||| || |||||||||||| |||||||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  55948 aagattattgacccagttcggtccaatatgacctaatctgggg-agagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaaga 56044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 35960847 - 35960901
Alignment:
Q  49 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaa 102  Q
    ||||||||||||||||||||||| |||||| ||| ||||| ||||||||||||||    
T  35960847 cctaatctgggggagagagcagccctccaaaccactatgatgaaagtgttacaaa 35960901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 4796764 - 4796667
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    ||||||||| ||||||||| | ||||  || |||||||||||||||| |||||| ||| |||||| ||||| |||| ||||||||||| |||||||||    
T  4796764 aagattgttaacccagttcggtccaaaatgacctaatctgggggagaaagcagccctcaaatccactatgatgaaattgttacaaaagagttacaaga 4796667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 28617319 - 28617258
Alignment:
Q  22 attgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatcca 82  Q
    |||||| ||||||||| | ||||| || |||| |||||||||||||||||||||||||||||    
T  28617319 attgtttacccagttcggtccaatatgacctactctgggggagagagcagctctccaatcca 28617258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 9185262 - 9185178
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 101  Q
    ||||||||| ||||||||| | ||||| |  |||| |||||||||||||| |||||||||||||| || || |||||||||||||    
T  9185262 aagattgttgacccagttcggtccaatataacctagtctgggggagagagaagctctccaatccactaagatgaaagtgttacaa 9185178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 259
Target Start/End: Original strand, 20284318 - 20284378
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 259  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  20284318 acccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccc 20284378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 23402881 - 23402821
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 259  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  23402881 acccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccc 23402821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 47263677 - 47263757
Alignment:
Q  18 aaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgtta 98  Q
    |||||||||| ||||||||| | ||||| || |||||| |||||||||  |||||||||||||||| ||||| ||||||||||    
T  47263677 aaagattgttgacccagttcggtccaatatgacctaatatgggggaga--gcagctctccaatccactatgatgaaagtgtta 47263757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 2479336 - 2479421
Alignment:
Q  18 aaagattgttcacccagttcagc-caatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaa 102  Q
    |||||||||| ||||||||| |  |||| || |||||||| |||| ||||||||||||| |||||| ||||| ||||||||||||||    
T  2479336 aaagattgttgacccagttcggttcaatatgacctaatctagggg-gagagcagctctcaaatccactatgatgaaagtgttacaaa 2479421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 258
Target Start/End: Complemental strand, 4796536 - 4796477
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacc 258  Q
    |||||||||| ||||||||||||  |||||||||||||  ||| | ||||||||||||||||    
T  4796536 acccaaggtgtttacaatgtttt--ccaacccaagagatcctcactacaaagacactcaacc 4796477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 259
Target Start/End: Complemental strand, 44847991 - 44847933
Alignment:
Q  199 ccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 259  Q
    |||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  44847991 ccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 44847933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 276
Target Start/End: Original strand, 2479565 - 2479642
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | | |||||||||||||||    |||||||||||||    
T  2479565 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactataaagacactcaaccctaaagttccctcctttg 2479642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 256
Target Start/End: Original strand, 21989137 - 21989194
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaa 256  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | ||||||||||||||    
T  21989137 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaa 21989194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 31155911 - 31155971
Alignment:
Q  23 ttgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatcca 82  Q
    ||||| ||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  31155911 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 31155971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 234; Significance: 1e-129; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 19 - 279
Target Start/End: Complemental strand, 39812072 - 39811811
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 118  Q
    ||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39812072 aagattgttgaaccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 39811973  T
Q  119 gccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgttt 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39811972 gccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgttt 39811873  T
Q  219 ttcccaacccaagagacactctcaacaaagacactcaaccca-ttggttccctcctttgcta 279  Q
    ||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  39811872 ttctcaacctaagagacactctcaacaaagacactcaacccatttggttccctcctttgcta 39811811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 32246789 - 32247031
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 118  Q
    ||||||||| |||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32246789 aagattgttgaccttgttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 32246888  T
Q  119 gccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgttt 218  Q
    || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  32246889 gctttcaagctttacacatgaacaaaccctagattataccctttggtattttcccactctcacactatgaaccctaaatcccaaggtgattacaatgttt 32246988  T
Q  219 ttcccaacccaagagacactctcaacaaagacactcaacccat 261  Q
    ||||||||| |||| ||||||||| ||||| ||| || |||||    
T  32246989 ttcccaacctaagaaacactctcatcaaaggcacacaccccat 32247031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 19 - 248
Target Start/End: Original strand, 19344422 - 19344655
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactct 117  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||    
T  19344422 aagattgttgacccagttcagccaatgtggcctaatctaggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatct 19344521  T
Q  118 agc-cttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaa--- 213  Q
    |||  ||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||  || ||||||||||||||||       
T  19344522 agcttttcaagctttacacatgaacaaaccctaga-cctaccctttggtattttcccaccctcacactatgaacccataatcccaaggtgattacaatgt 19344620  T
Q  214 tgtttttcccaacccaagagacactctcaacaaag 248  Q
    |||||||||||||| |||| ||||||||| |||||    
T  19344621 tgtttttcccaacctaagaaacactctcatcaaag 19344655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 19 - 248
Target Start/End: Original strand, 19349280 - 19349513
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactct 117  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||    
T  19349280 aagattgttgacccagttcagccaatgtggcctaatctaggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatct 19349379  T
Q  118 agc-cttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaa--- 213  Q
    |||  ||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||  || ||||||||||||||||       
T  19349380 agcttttcaagctttacacatgaacaaaccctaga-cctaccctttggtattttcccaccctcacactatgaacccataatcccaaggtgattacaatgt 19349478  T
Q  214 tgtttttcccaacccaagagacactctcaacaaag 248  Q
    |||||||||||||| |||| ||||||||| |||||    
T  19349479 tgtttttcccaacctaagaaacactctcatcaaag 19349513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 163
Target Start/End: Complemental strand, 44312708 - 44312563
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag-actct 117  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44312708 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactct 44312609  T
Q  118 agccttcaagctttacacatgaacaaaccctagattctaccctttg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  44312608 agccttcaagctttacacatgaacaaaccctagattctaccctttg 44312563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 19 - 197
Target Start/End: Complemental strand, 11099023 - 11098843
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--act 115  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||  ||     
T  11099023 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaaca 11098924  T
Q  116 ctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
     |||| | ||||| ||||||| |||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  11098923 atagcttgcaagc-ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaatatgaaccctaaaa 11098843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 19 - 197
Target Start/End: Original strand, 14291489 - 14291669
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--act 115  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||  ||     
T  14291489 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaaca 14291588  T
Q  116 ctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
     |||||||||||| ||||||| |||||| ||||||||||||||| |  || ||| |||||||||||| ||||||||||||||    
T  14291589 atagccttcaagc-ttacacaagaacaagccctagattctacccatatgtgtttccccactctcacaatatgaaccctaaaa 14291669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 19 - 197
Target Start/End: Complemental strand, 9296497 - 9296317
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--act 115  Q
    ||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||  ||     
T  9296497 aagattgttgacccagttcagccaatatggcctaatttgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaaca 9296398  T
Q  116 ctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
     |||||||||||| ||| ||| |||||| ||||||||||||||| |  || ||| |||||||||||| ||||||||||||||    
T  9296397 atagccttcaagc-ttatacaagaacaagccctagattctacccatatgtgtttccccactctcacaatatgaaccctaaaa 9296317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 18 - 197
Target Start/End: Original strand, 3491750 - 3491930
Alignment:
Q  18 aaagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-act 115  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| |      
T  3491750 aaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaa 3491849  T
Q  116 ctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
     |||| | ||||| ||||||| ||||||  |||||||||||||| || || ||| |||||||||||| ||||||||||||||    
T  3491850 atagcttgcaagc-ttacacaagaacaagacctagattctacccatttgtgtttccccactctcacaatatgaaccctaaaa 3491930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 197
Target Start/End: Original strand, 25398495 - 25398675
Alignment:
Q  18 aaagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-act 115  Q
    |||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| |      
T  25398495 aaagattgttgacccagttcagccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaa 25398594  T
Q  116 ctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
     |||| | ||||| ||||||| ||||||  ||||| |||||||| || || |||  ||||||||||| ||||||||||||||    
T  25398595 atagcttgcaagc-ttacacaagaacaagtcctagtttctacccatttgtgtttctccactctcacaatatgaaccctaaaa 25398675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 18 - 197
Target Start/End: Original strand, 25403633 - 25403813
Alignment:
Q  18 aaagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-act 115  Q
    |||||||||| || ||||||||||||| || |||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| |      
T  25403633 aaagattgttgactcagttcagccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaa 25403732  T
Q  116 ctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
     |||| | ||||| ||||||| ||||||  ||||| |||||||| || || |||  ||||||||||| ||||||||||||||    
T  25403733 atagcttgcaagc-ttacacaagaacaagtcctagtttctacccatttgtgtttctccactctcacaatatgaaccctaaaa 25403813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 197 - 276
Target Start/End: Complemental strand, 11098790 - 11098711
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  11098790 acccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttg 11098711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 197 - 276
Target Start/End: Complemental strand, 9296265 - 9296186
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    |||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||| ||||||||||||||||    
T  9296265 acccaaggtgattacaatgtttttcccaacccaatagacactttctacaaagacactcaaccctttggttccctcctttg 9296186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 197 - 276
Target Start/End: Original strand, 14291722 - 14291801
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||| ||||||||||||||||    
T  14291722 acccaaggtgattacaatgtttttcccaacccaagagacactatctacaaagacgctcaaccctttggttccctcctttg 14291801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 49 - 197
Target Start/End: Original strand, 25407653 - 25407802
Alignment:
Q  49 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-actctagccttcaagctttacacatgaacaaacc 146  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| |   |||| | ||||| ||||||| ||||||  |    
T  25407653 cctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaaatagcttgcaagc-ttacacaagaacaagtc 25407751  T
Q  147 ctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
    |||| |||||||| || || |||  ||||||||||| ||||||||||||||    
T  25407752 ctagtttctacccatttgtgtttctccactctcacaatatgaaccctaaaa 25407802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 8040060 - 8040147
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 104  Q
    ||||||||| ||||||||||| ||||| || |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  8040060 aagattgttgacccagttcagtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaag 8040147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 195
Target Start/End: Original strand, 13569331 - 13569506
Alignment:
Q  22 attgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaagactcta 118  Q
    |||||| ||||||||| | ||||| || |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||   ||    
T  13569331 attgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaatta 13569430  T
Q  119 gccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaa 195  Q
    || |  ||| |||||||| ||||||  ||||  |||||||||||| |  |  |||||||||||| |||||| |||||    
T  13569431 gcttataag-tttacacaagaacaagacctaatttctaccctttgtttgtcacccactctcacaatatgaatcctaa 13569506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 40738843 - 40738926
Alignment:
Q  18 aaagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 101  Q
    |||||||||| |||||||||||||||| || ||||||||||||| |||||||||||||||||||| ||||| |||||||||||||    
T  40738843 aaagattgttgacccagttcagccaatatgacctaatctggggg-gagagcagctctccaatccactatgatgaaagtgttacaa 40738926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 21629944 - 21630040
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    ||||||||| ||||||||||| ||||| || |||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  21629944 aagattgttgacccagttcagtccaatatgacctaatctgggg-agagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaaga 21630040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 28259275 - 28259178
Alignment:
Q  18 aaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 113  Q
    |||||||||| ||||||||| | ||||| || |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  28259275 aaagattgttgacccagttcggtccaatatgacctaatttgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 28259178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 197 - 259
Target Start/End: Original strand, 25409860 - 25409922
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 259  Q
    |||||||||| |||||||||||||||||||||||||||  ||||| |||||||||||||||||    
T  25409860 acccaaggtgtttacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccc 25409922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 10445541 - 10445444
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    ||||||||| | ||||||| | ||||| || |||||||||||||||||||||||||||||||||| ||| | |||||||||||||||| |||||||||    
T  10445541 aagattgttgatccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactattatgaaagtgttacaaaagagttacaaga 10445444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 17865203 - 17865300
Alignment:
Q  19 aagattgttcacccagttcagcc-aatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    ||||||||| ||||||||||| | ||| || ||||||||||||||||||||| | |||||||||| ||||| |||||||||||||||| |||||||||    
T  17865203 aagattgttgacccagttcagtcgaatatgacctaatctgggggagagagcaaccctccaatccactatgatgaaagtgttacaaaagagttacaaga 17865300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 20522220 - 20522317
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaa-ggttacaaga 113  Q
    ||||||||| ||||||||| | ||||| || ||||||||||||||||||||| | |||||||||| ||||| ||||||||||||||| ||||||||||    
T  20522220 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcaaccctccaatccactatgatgaaagtgttacaaaagggttacaaga 20522317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 34682431 - 34682334
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    ||||||||| ||||||||| | ||||| || | |||||||||||||||||||||||||||||||| ||| | |||||||||||||||| |||||||||    
T  34682431 aagattgttgacccagttcggtccaatatgacataatctgggggagagagcagctctccaatccactataatgaaagtgttacaaaagagttacaaga 34682334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 34388859 - 34388955
Alignment:
Q  20 agattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    |||||||| ||||| ||| | ||||| || ||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||| |||||||||    
T  34388859 agattgttgacccaattcggtccaatatgacctaatctgggggagagagtagctctccaatccactatgatgaaagtgttacaaaagagttacaaga 34388955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 14699104 - 14699008
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    ||||||||| ||||||||| | ||||| || ||||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||||||||    
T  14699104 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaag-gttacaaaagagttacaaga 14699008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 10707348 - 10707252
Alignment:
Q  20 agattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    |||||||| ||||||||| | ||||| || |||||| ||||||||||| || |||||||||||| ||||| |||||||||||||||| |||||||||    
T  10707348 agattgttgacccagttcggtccaatatgacctaatatgggggagagaacaactctccaatccactatgatgaaagtgttacaaaagagttacaaga 10707252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 259
Target Start/End: Original strand, 3491981 - 3492043
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 259  Q
    |||||||||| ||||||||||||| |||||||||||||  ||| | |||||||||||||||||    
T  3491981 acccaaggtgtttacaatgttttttccaacccaagagatcctcactacaaagacactcaaccc 3492043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 8390216 - 8390150
Alignment:
Q  49 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||||||||| ||||| |||||||||    
T  8390216 cctaatttgggggagagagcagctctccaatccactatgatgaaagtgttaaaaaagagttacaaga 8390150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 31056042 - 31056131
Alignment:
Q  17 caaagattgttcacccagttcagc-caatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 104  Q
    ||||||||||| ||| ||||| |  |||| || |||||||| ||||||||||||||||||||||||| || || ||||||||||||||||    
T  31056042 caaagattgttgacctagttcggttcaatatgacctaatctaggggagagagcagctctccaatccactaagatgaaagtgttacaaaag 31056131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 42039744 - 42039670
Alignment:
Q  40 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 113  Q
    ||||| || ||||||||| ||||||||||||||||| |||||| ||||| ||||||||||| ||  |||||||||    
T  42039744 ccaatatgacctaatctgtgggagagagcagctctctaatccactatgatgaaagtgttacgaagagttacaaga 42039670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 23078568 - 23078471
Alignment:
Q  18 aaagattgttcacccagttc-agccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 113  Q
    ||||| |||| ||||||||| | ||||| || |||||| ||||||||||| || |||||||||||| ||||| |||||||||| |||  |||||||||    
T  23078568 aaagaatgttgacccagttcgatccaatatgacctaatatgggggagagaacaactctccaatccactatgatgaaagtgttagaaagagttacaaga 23078471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 33528718 - 33528621
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    ||||||||| ||||||||| | ||||| || |||||| ||||  |||||||| | |||||||||| ||||| |||||||||||||||| |||||||||    
T  33528718 aagattgttgacccagttcggtccaatatgacctaatatgggaaagagagcaaccctccaatccactatgatgaaagtgttacaaaagagttacaaga 33528621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 39482931 - 39483028
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    ||||||||| ||| ||||| | ||||| || |||||| |||||||||||||||  |||||||||| ||||| |||| ||||||||||| |||||||||    
T  39482931 aagattgttgacctagttcggtccaatatgacctaatatgggggagagagcaggcctccaatccactatgatgaaaatgttacaaaagagttacaaga 39483028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 103
Target Start/End: Original strand, 33118158 - 33118222
Alignment:
Q  40 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaa 103  Q
    ||||| || |||||| |||||||||||||||| |||||||||| ||||| ||||| |||||||||    
T  33118158 ccaatatgacctaatttgggggagagagcagccctccaatccactatgatgaaagagttacaaaa 33118222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 276
Target Start/End: Original strand, 40739063 - 40739140
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    |||||||||||||    
T  40739063 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctagagttccctcctttg 40739140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 16940306 - 16940219
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 104  Q
    ||||||||| ||||| ||| | ||||| || | |||||||||||| ||| |||| |||||||||| ||||| ||||||||||||||||    
T  16940306 aagattgttgacccaattcggtccaatatgacataatctgggggaaagatcagccctccaatccactatgatgaaagtgttacaaaag 16940219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 17010971 - 17010884
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 104  Q
    ||||||||| ||||| ||| | ||||| || | |||||||||||| ||| |||| |||||||||| ||||| ||||||||||||||||    
T  17010971 aagattgttgacccaattcggtccaatatgacataatctgggggaaagatcagccctccaatccactatgatgaaagtgttacaaaag 17010884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 36757630 - 36757570
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 259  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  36757630 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 36757570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 36757860 - 36757718
Alignment:
Q  18 aaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagact 115  Q
    |||||||||| ||||| ||| | ||||| || ||||||||||||| || | ||||||||||||||| ||||| ||||||||| ||||  |||| ||||      
T  36757860 aaagattgttgacccaattcggtccaatatgacctaatctgggggggataacagctctccaatccagtatgatgaaagtgtttcaaagagttataagaaa 36757761  T
Q  116 ctagccttcaagctttacacatgaacaaaccctagattctaccc 159  Q
      ||| ||||||| ||||||| ||||||| ||||  ||||||||    
T  36757760 aaagctttcaagc-ttacacaagaacaaaacctaatttctaccc 36757718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 259
Target Start/End: Original strand, 39483162 - 39483222
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 259  Q
    |||||||||| ||||||| |||  ||||||||||||||  ||| |||||||||||||||||||    
T  39483162 acccaaggtgtttacaatattt--cccaacccaagagatcctcacaacaaagacactcaaccc 39483222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 257
Target Start/End: Original strand, 21630174 - 21630232
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaac 257  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||    
T  21630174 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaac 21630232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 20522471 - 20522511
Alignment:
Q  219 ttcccaacccaagagacactctcaacaaagacactcaaccc 259  Q
    |||||||||||||||| |||| | |||||||||||||||||    
T  20522471 ttcccaacccaagagatactcactacaaagacactcaaccc 20522511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 260
Target Start/End: Complemental strand, 23078339 - 23078278
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccca 260  Q
    |||||||||| |||||||||||  ||||||||||||||  |||   ||||||||||||||||||    
T  23078339 acccaaggtgtttacaatgttt--cccaacccaagagattctcatcacaaagacactcaaccca 23078278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 260
Target Start/End: Complemental strand, 29867840 - 29867780
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccca 260  Q
    |||||||||| ||||||||  ||||||||||||||||| ||||| | ||||||| |||||||||    
T  29867840 acccaaggtgtttacaatg--tttcccaacccaagaga-actctaatcaaagaccctcaaccca 29867780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 35215586 - 35215646
Alignment:
Q  23 ttgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatcca 82  Q
    ||||| ||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  35215586 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 35215646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 35217963 - 35218023
Alignment:
Q  23 ttgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatcca 82  Q
    ||||| ||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  35217963 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 35218023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 41586419 - 41586358
Alignment:
Q  197 acccaaggtgattacaa-tgtttttcccaacccaagagacactctcaacaaagacactcaaccc 259  Q
    |||||||||| |||||| ||||||  |||||||||||||  |||||| ||||||||||||||||    
T  41586419 acccaaggtgtttacaactgtttt--ccaacccaagagaagctctcaccaaagacactcaaccc 41586358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 230; Significance: 1e-127; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 19 - 279
Target Start/End: Complemental strand, 7290010 - 7289749
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctct 117  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7290010 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactct 7289911  T
Q  118 agccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt 217  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  7289910 agccttcaagctttacacatgaacaaaccctatattctaccctttggtgtttccccactctcacaatatgaaccctaaaacccaaggtgattacaatgtt 7289811  T
Q  218 tttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgcta 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7289810 tttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgcta 7289749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 19 - 276
Target Start/End: Complemental strand, 25328362 - 25328105
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 118  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25328362 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 25328263  T
Q  119 gccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgttt 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||  ||||||||||||||||||||||||||||||||||    
T  25328262 gccttcaagctttacacatgaacaaaccctagattctaccctttggtgtttccccactctcacaacatgaaccctaaaacccaaggtgattacaatgttt 25328163  T
Q  219 ttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    |||||||||||||||||||||||| ||||||||| |||||||| || |||||||||||    
T  25328162 ttcccaacccaagagacactctcatcaaagacacacaacccataggatccctcctttg 25328105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 39784906 - 39784665
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 118  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  39784906 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaa-gtgttacaaaaggttacaagactcta 39784808  T
Q  119 gcct-tcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt 217  Q
    || | |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  39784807 gcttatcaagctttacacatgaacaaaccctagaa-ctaccctttggtattttcccactctcacactatgaacccaaaatcccaaggtgattacaatgtt 39784709  T
Q  218 tttcccaacccaagagacactctcaacaaagacactcaacccat 261  Q
    |||||||||| ||||||| |||||| ||||| ||| || |||||    
T  39784708 tttcccaacctaagagactctctcatcaaaggcacacaccccat 39784665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 19 - 248
Target Start/End: Original strand, 35745392 - 35745624
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactct 117  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||    
T  35745392 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatct 35745491  T
Q  118 agc-cttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgt 216  Q
    |||  ||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||  || |||||||||||||||||||    
T  35745492 agcttttcaagctttacacatgaacaaaccctaga-cctaccctttggtattttcccaccctcacactatgaacccataatcccaaggtgattacaatgt 35745590  T
Q  217 --ttttcccaacccaagagacactctcaacaaag 248  Q
      ||||||||||| |||| ||||||||| |||||    
T  35745591 tgttttcccaacctaagaaacactctcatcaaag 35745624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 19 - 197
Target Start/End: Original strand, 6311298 - 6311477
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag--actc 116  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  6311298 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaaactc 6311397  T
Q  117 tagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||| ||| ||||||||||||  |||||||||||||    
T  6311398 tagccttcaagctttacacaag-acaaaccctagattctaccctttggtgtttccccactctcacaagatgaaccctaaaa 6311477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 19 - 248
Target Start/End: Complemental strand, 10684348 - 10684116
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactct 117  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||    
T  10684348 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatct 10684249  T
Q  118 agcct-tcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgt 216  Q
    ||| | |||||||||||||| ||  ||||||||||  ||||||||||||| |||||||  ||||||||||||||||  || |||||||||||||||||||    
T  10684248 agcttatcaagctttacacaagacaaaaccctaga-cctaccctttggtaatttcccaacctcacactatgaacccataatcccaaggtgattacaatgt 10684150  T
Q  217 --ttttcccaacccaagagacactctcaacaaag 248  Q
      ||||||||||| |||| ||||||||| |||||    
T  10684149 tgttttcccaacctaagatacactctcatcaaag 10684116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 19 - 197
Target Start/End: Original strand, 36979378 - 36979558
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--act 115  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||  ||     
T  36979378 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaaca 36979477  T
Q  116 ctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
     |||||||||||| ||||||| |||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  36979478 atagccttcaagc-ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaatatgaaccctaaaa 36979558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 19 - 197
Target Start/End: Original strand, 30655647 - 30655827
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--act 115  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||  ||     
T  30655647 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatctaatatgatgaaagtgttacaaagggttacaagaaaca 30655746  T
Q  116 ctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
     |||||||||||| ||||||| |||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  30655747 atagccttcaagc-ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaatatgaaccctaaaa 30655827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 19 - 196
Target Start/End: Complemental strand, 33037902 - 33037724
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag--actc 116  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||      
T  33037902 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaagggttacaagaaacaa 33037803  T
Q  117 tagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaa 196  Q
    |||||||||||| ||||||| |||||||||||||||||||||| |  || ||| |||||||||||| |||||||||||||    
T  33037802 tagccttcaagc-ttacacaagaacaaaccctagattctacccatatgtgtttccccactctcacaatatgaaccctaaa 33037724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 19 - 197
Target Start/End: Complemental strand, 18853264 - 18853083
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaa-ggttacaag--ac 114  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||  ||    
T  18853264 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatataatgaaagtgttacaaaagggttacaagaaac 18853165  T
Q  115 tctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
      |||| ||||||| ||||||| |||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||    
T  18853164 aatagcattcaagc-ttacacaagaacaaaccctagattttaccctttggtatttccccactctcacaatatgaaccctaaaa 18853083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 19 - 197
Target Start/End: Complemental strand, 18870658 - 18870477
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaagg-ttacaagactc 116  Q
    ||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||  |    
T  18870658 aagattgttgacccagttcatccaatatggcctaatctgggggagagagcagctctccaatccaatataatgaaagtgttacaaaagggttacaagaaac 18870559  T
Q  117 --tagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
      |||| ||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  18870558 aatagcattcaagctt-acacaagaacaaaccctagattctaccctttggtatttccccactctcacaatatgaaccctaaaa 18870477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 19 - 197
Target Start/End: Complemental strand, 4760171 - 4759991
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--act 115  Q
    ||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||  ||     
T  4760171 aagattgttgacccagttcagccaatatggcctaatatgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaaca 4760072  T
Q  116 ctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
     |||||||||||| ||||||| |||||| ||||||||||||||| |  || ||| |||||||||||| ||||||||||||||    
T  4760071 atagccttcaagc-ttacacaagaacaagccctagattctacccatatgtgtttccccactctcacaatatgaaccctaaaa 4759991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 19 - 197
Target Start/End: Complemental strand, 10689239 - 10689058
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--act 115  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||  ||     
T  10689239 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacagagggttacaagaaaca 10689140  T
Q  116 ctagccttcaagctttacacatgaacaaaccctagattctaccc-tttggtattttcccactctcacactatgaaccctaaaa 197  Q
     |||||||||||| ||||||| |||||| ||||||||||||||| | || | ||| |||||||||||| ||||||||||||||    
T  10689139 atagccttcaagc-ttacacaagaacaagccctagattctacccatatgttgtttccccactctcacaatatgaaccctaaaa 10689058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 197 - 279
Target Start/End: Original strand, 6311532 - 6311614
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgcta 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6311532 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccctttggttccctcctttgcta 6311614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 197
Target Start/End: Complemental strand, 1262051 - 1261871
Alignment:
Q  18 aaagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-act 115  Q
    |||||||||| |||||||||| ||||| || |||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| |      
T  1262051 aaagattgttgacccagttcaaccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaa 1261952  T
Q  116 ctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
     |||| | ||||| ||||||| | ||||  |||||||||||||| || || ||| |||||||||||| ||||||||||||||    
T  1261951 atagcttgcaagc-ttacacaagtacaagacctagattctacccatttgtgtttccccactctcacaatatgaaccctaaaa 1261871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 197 - 276
Target Start/End: Complemental strand, 18870424 - 18870345
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18870424 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccctttggttccctcctttg 18870345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 185 - 276
Target Start/End: Complemental strand, 25328070 - 25327979
Alignment:
Q  185 atgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| || |||||||||||    
T  25328070 atgaaccctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcatcaaagacacacaacccataggatccctcctttg 25327979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 197 - 276
Target Start/End: Original strand, 30655880 - 30655959
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30655880 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccctttggttccctcctttg 30655959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 197 - 276
Target Start/End: Complemental strand, 10689003 - 10688924
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  10689003 acccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttg 10688924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 197 - 276
Target Start/End: Complemental strand, 18853030 - 18852951
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18853030 acccaaggtgattacaatatttttcccaacccaagagacactctcaacaaagacactcaaccctttggttccctcctttg 18852951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 197 - 276
Target Start/End: Complemental strand, 33037671 - 33037592
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||    
T  33037671 acccaaggtgattacaatgtttttcccaacccaagagacactctctacgaagacactcaaccctttggttccctcctttg 33037592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 18 - 197
Target Start/End: Complemental strand, 31071327 - 31071146
Alignment:
Q  18 aaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-ac 114  Q
    |||||||||| ||| ||||| | ||||| || |||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| |     
T  31071327 aaagattgttgaccgagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaa 31071228  T
Q  115 tctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
      |||| | ||||| ||||||| ||||||  ||||| |||||||| || || ||| |||||||||||| ||||||||||||||    
T  31071227 aatagcttgcaagc-ttacacaagaacaagtcctagtttctacccatttgtgtttccccactctcacaatatgaaccctaaaa 31071146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 26287901 - 26287985
Alignment:
Q  18 aaagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 101  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  26287901 aaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaa 26287985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 26301158 - 26301242
Alignment:
Q  18 aaagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 101  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  26301158 aaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaa 26301242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 26313152 - 26313236
Alignment:
Q  18 aaagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 101  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  26313152 aaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaa 26313236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 277
Target Start/End: Complemental strand, 4759938 - 4759857
Alignment:
Q  197 acccaaggtgattacaatgttttt-cccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgc 277  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||| |||||| ||||||||||    
T  4759938 acccaaggtgattacaatgttttttcccaacccaagagactctctctacaaagacactcaaccctttggttacctcctttgc 4759857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 197 - 276
Target Start/End: Complemental strand, 1261820 - 1261741
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    |||||||||||||    
T  1261820 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttg 1261741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 197 - 276
Target Start/End: Original strand, 36979611 - 36979689
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| |||||||||| |||||    
T  36979611 acccaaggtgattacaatgtttt-cccaacctaagagacactctctacaaagacactcaaccctttggttcccttctttg 36979689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 26403327 - 26403240
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 104  Q
    ||||||||| ||||||||| | ||||| || |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  26403327 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaag 26403240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 4456050 - 4456124
Alignment:
Q  40 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 113  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  4456050 ccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 4456124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 113
Target Start/End: Original strand, 7412344 - 7412437
Alignment:
Q  22 attgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 113  Q
    |||||| ||||||||| | ||||| || |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  7412344 attgttgacccagttcggtccaatatgacctaatatgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 7412437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 19175852 - 19175755
Alignment:
Q  18 aaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 113  Q
    |||||||||| ||| ||||| | ||||| || ||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||  |||||||||    
T  19175852 aaagattgttgacctagttcggtccaatatgacctaatctgggggagagagcaactctccaatccactatgatgaaagtgttacaaagagttacaaga 19175755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 6127216 - 6127318
Alignment:
Q  14 catcaaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttaca 110  Q
    ||||||| |||||| || |||||| | ||||| || |||||| ||||| ||||||||||||||||||||| ||||| |||||||||||||||| ||||||    
T  6127216 catcaaatattgttgactcagttcggtccaatatgacctaatttggggaagagagcagctctccaatccactatgatgaaagtgttacaaaagagttaca 6127315  T
Q  111 aga 113  Q
    |||    
T  6127316 aga 6127318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 23799674 - 23799577
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    ||||||||| ||||||||| | ||||| || |||||| ||| |||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  23799674 aagattgttgacccagttcggtccaatatgacctaatttggaggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaaga 23799577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 4696693 - 4696609
Alignment:
Q  19 aagattgttcacccagttc-agccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 101  Q
    ||||||||| ||||||||| | ||||| || ||||||||||||||||||||||| |||||||||| ||||| ||||| |||||||    
T  4696693 aagattgttgacccagttcgatccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagagttacaa 4696609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 257
Target Start/End: Complemental strand, 31071095 - 31071035
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaac 257  Q
    |||||||||| |||||||||||||||||||||||||||  ||| | |||||||||||||||    
T  31071095 acccaaggtgtttacaatgtttttcccaacccaagagatcctcactacaaagacactcaac 31071035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 9765914 - 9765852
Alignment:
Q  21 gattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatcca 82  Q
    ||||||| ||||||||| | ||||| || ||||||||||||||||||||||||||||||||||    
T  9765914 gattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatcca 9765852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 259
Target Start/End: Original strand, 26288121 - 26288183
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 259  Q
    |||||||||| ||||||||||||||||||| |||||||  ||||| ||||||||| |||||||    
T  26288121 acccaaggtgtttacaatgtttttcccaactcaagagattctctctacaaagacattcaaccc 26288183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 259
Target Start/End: Original strand, 26301378 - 26301440
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 259  Q
    |||||||||| ||||||||||||||||||| |||||||  ||||| ||||||||| |||||||    
T  26301378 acccaaggtgtttacaatgtttttcccaactcaagagattctctctacaaagacattcaaccc 26301440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 259
Target Start/End: Original strand, 26313372 - 26313434
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 259  Q
    |||||||||| ||||||||||||||||||| |||||||  ||||| ||||||||| |||||||    
T  26313372 acccaaggtgtttacaatgtttttcccaactcaagagattctctctacaaagacattcaaccc 26313434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 5702580 - 5702483
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    ||||||||| ||||||||| | ||||| || |||||| |||||||||||||| | |||||||||  ||||| |||||||||||||||| |||||||||    
T  5702580 aagattgttgacccagttcggtccaatatgacctaatatgggggagagagcatccctccaatcccctatgatgaaagtgttacaaaagagttacaaga 5702483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 197 - 259
Target Start/End: Original strand, 7412569 - 7412629
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 259  Q
    |||||||||| |||||||||||  ||||||||||||||  ||||| |||||||||||||||||    
T  7412569 acccaaggtgtttacaatgttt--cccaacccaagagatcctctctacaaagacactcaaccc 7412629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 19752491 - 19752407
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 101  Q
    ||||||||| ||| ||||| | ||||| || |||| ||| ||||||||||||||||||||||||| || || |||||||||||||    
T  19752491 aagattgttgacctagttcggtccaatatgacctagtctaggggagagagcagctctccaatccactaagatgaaagtgttacaa 19752407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 4696476 - 4696416
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 259  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  4696476 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 4696416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 6813681 - 6813750
Alignment:
Q  17 caaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaata 85  Q
    ||||||||||| ||||||||| | ||||| |  ||||  || ||||||||||||||||||||||||||||    
T  6813681 caaagattgttaacccagttcggtccaatataacctacactaggggagagagcagctctccaatccaata 6813750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 82
Target Start/End: Complemental strand, 18811015 - 18810982
Alignment:
Q  49 cctaatctgggggagagagcagctctccaatcca 82  Q
    ||||||||||||||||||||||| ||||||||||    
T  18811015 cctaatctgggggagagagcagccctccaatcca 18810982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 259
Target Start/End: Complemental strand, 23799441 - 23799384
Alignment:
Q  200 caaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 259  Q
    ||||||| ||||||||||   ||||||||||||||  ||||| |||||||||||||||||    
T  23799441 caaggtgtttacaatgttc--cccaacccaagagatcctctctacaaagacactcaaccc 23799384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 43079937 - 43079877
Alignment:
Q  23 ttgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatcca 82  Q
    ||||| ||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  43079937 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 43079877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 43082308 - 43082248
Alignment:
Q  23 ttgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatcca 82  Q
    ||||| ||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  43082308 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 43082248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 19 - 279
Target Start/End: Complemental strand, 35146 - 34885
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctct 117  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  35146 aagattgttaacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttagaagaactct 35047  T
Q  118 agccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt 217  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  35046 agccttcaagctttacacatgaacaaaccctagactctaccctttggtgtttccccactctcacactatgaaccctaaaacccaaggtgattacaatgtt 34947  T
Q  218 tttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgcta 279  Q
    || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34946 ttcccaaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgcta 34885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 222; Significance: 1e-122; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 19 - 279
Target Start/End: Complemental strand, 9224491 - 9224230
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctct 117  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  9224491 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttagaagaactct 9224392  T
Q  118 agccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt 217  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9224391 agccttcaagctttacacatgaacaaaccctagactctaccctttggtgtttccccactctcacactatgaaccctaaaacccaaggtgattacaatgtt 9224292  T
Q  218 tttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgcta 279  Q
    || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9224291 ttcccaaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgcta 9224230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 19 - 279
Target Start/End: Complemental strand, 9229278 - 9229017
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctct 117  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  9229278 aagattgttaacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttagaagaactct 9229179  T
Q  118 agccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt 217  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9229178 agccttcaagctttacacatgaacaaaccctagactctaccctttggtgtttccccactctcacactatgaaccctaaaacccaaggtgattacaatgtt 9229079  T
Q  218 tttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgcta 279  Q
    || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9229078 ttcccaaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgcta 9229017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 19 - 275
Target Start/End: Original strand, 51520458 - 51520715
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctct 117  Q
    ||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  51520458 aagattgttgacccagttctgccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactct 51520557  T
Q  118 agccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||  | ||||||||||||||||||||||||||||||||||    
T  51520558 agccttcaagctttacacatgaacaaaccctagattctaccctttggtgtttccccactctcttaatatgaaccctaaaacccaaggtgattacaatgtt 51520657  T
Q  218 tttcccaacccaagagacactctcaacaaagacactcaacccattggttccctccttt 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51520658 tttcccaacccaagagacactctcaacaaagacactcaacccattggttccctccttt 51520715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 19 - 276
Target Start/End: Original strand, 3814025 - 3814281
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 118  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  3814025 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaaagtgttacaaaaggttacaagactcta 3814124  T
Q  119 gccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgttt 218  Q
    || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3814125 gctttcaagctttacacatgaacaaaccctaga-tctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgttt 3814223  T
Q  219 ttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    ||||||||| |||| ||||||||| ||||||||| || ||||| || |||||||||||    
T  3814224 ttcccaacctaagaaacactctcatcaaagacacacaccccataggatccctcctttg 3814281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 45347901 - 45347658
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagac-tct 117  Q
    ||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  45347901 aagattgttgacccagttcagccaatatggcttaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagacctct 45347802  T
Q  118 agccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  45347801 agccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaccccaaggtgattacaatgtt 45347702  T
Q  218 tttcccaacccaagagacactctcaacaaagacactcaacccat 261  Q
    |||||||||| |||||||||||||| ||||| ||| || |||||    
T  45347701 tttcccaacctaagagacactctcatcaaaggcacacaccccat 45347658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 45357380 - 45357138
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 118  Q
    ||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45357380 aagattgttgacccagttcagccaatatggcataatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 45357281  T
Q  119 gccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgttt 218  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  45357280 gctttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaccccaaggtgattacaatgttt 45357181  T
Q  219 ttcccaacccaagagacactctcaacaaagacactcaacccat 261  Q
    ||||||||| |||| || |||||| ||||| ||| || |||||    
T  45357180 ttcccaacctaagaaactctctcatcaaaggcacacaccccat 45357138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 5732666 - 5732907
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 118  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5732666 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 5732765  T
Q  119 gccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgttt 218  Q
    || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||    
T  5732766 gctttcaagctttacacatgaacaaaccctaga-tctaccctttggtattttcccactctcacactataaacccttaatcccaaggtgattacaatgttt 5732864  T
Q  219 ttcccaacccaagagacactctcaacaaagacactcaacccat 261  Q
    ||||||||| |||| ||||||||| ||||| ||| || |||||    
T  5732865 ttcccaacctaagaaacactctcatcaaaggcacacaccccat 5732907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 19 - 248
Target Start/End: Original strand, 18855728 - 18855956
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 118  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  18855728 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaa-gtgttacaaaaggttacaagactcta 18855826  T
Q  119 gcct-tcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt 217  Q
    || | |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||    
T  18855827 gcttatcaagctttacacatgaacaaaccctagaa-ctaccctttggtattttcccactctcacactatgaacccacaatcccaaggtgattacaatgtt 18855925  T
Q  218 tttcccaacccaagagacactctcaacaaag 248  Q
    |||||||||| |||| || |||||| |||||    
T  18855926 tttcccaacctaagaaactctctcatcaaag 18855956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 19 - 197
Target Start/End: Original strand, 24741941 - 24742121
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--act 115  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||  ||     
T  24741941 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaaca 24742040  T
Q  116 ctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
     |||||||||||| ||||||| |||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  24742041 atagccttcaagc-ttacacaagaacaaaccctagattctaccctttggtgtttccccactctcacaatatgaaccctaaaa 24742121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 31 - 149
Target Start/End: Complemental strand, 56146783 - 56146664
Alignment:
Q  31 ccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag-actctagccttcaagct 129  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  56146783 ccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactctagccttcaagct 56146684  T
Q  130 ttacacatgaacaaacccta 149  Q
    ||||||||||||||||||||    
T  56146683 ttacacatgaacaaacccta 56146664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 19 - 195
Target Start/End: Original strand, 29760642 - 29760821
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaagactc- 116  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  |     
T  29760642 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaaca 29760741  T
Q  117 -tagccttcaagctttacacatgaa-caaaccctagattctaccctttggtattttcccactctcacactatgaaccctaa 195  Q
     |||||| ||||||| ||||| ||| |||  |||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  29760742 atagcctgcaagctt-acacaagaaacaagacctagattctaccctttggtgtttccccactctcacactatgaaccctaa 29760821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 191 - 279
Target Start/End: Complemental strand, 18712677 - 18712589
Alignment:
Q  191 cctaaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgcta 279  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18712677 cctaaaacccaaggtgataacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgcta 18712589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 197 - 276
Target Start/End: Original strand, 24742174 - 24742253
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  24742174 acccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttg 24742253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 197 - 276
Target Start/End: Original strand, 29760874 - 29760954
Alignment:
Q  197 acccaaggtgattacaatgtttt-tcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  29760874 acccaaggtgattacaatgttttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttg 29760954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 28468626 - 28468542
Alignment:
Q  18 aaagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 101  Q
    |||||||||| |||||||||||||||| || |||||||||| ||||||||||||||||||||||| ||||| |||||||||||||    
T  28468626 aaagattgttgacccagttcagccaatatgacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttacaa 28468542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 197
Target Start/End: Complemental strand, 31985731 - 31985552
Alignment:
Q  18 aaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-ac 114  Q
    |||||||||| ||||||||| | ||||| || |||||||||||| ||||||||||||||||||||| ||||| |||||||||||||| ||||||||| |     
T  31985731 aaagattgttgacccagttcggtccaatatgacctaatctgggg-agagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaa 31985633  T
Q  115 tctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
      |||| | ||||| ||||||| ||||||  ||||  |||||||| || ||  ||||||||||||||| | ||||||||||||    
T  31985632 aatagcttgcaagc-ttacacaagaacaagtcctaatttctacccatttgt-gtttcccactctcacaatgtgaaccctaaaa 31985552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 10047379 - 10047476
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    ||||||||| ||||||||| | ||||| || ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  10047379 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaaga 10047476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 39245994 - 39246091
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    ||||||||| ||||||||| | ||||| || ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  39245994 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaaga 39246091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 36315326 - 36315230
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 113  Q
    |||| |||| ||||||||| | ||||| || |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  36315326 aagaatgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 36315230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 36329535 - 36329439
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 113  Q
    |||| |||| ||||||||| | ||||| || |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  36329535 aagaatgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 36329439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 5396769 - 5396672
Alignment:
Q  18 aaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 113  Q
    |||||||||| ||||||||| | ||||| || |||||||||| ||||||||||||||||||||||| ||||| ||||||||| ||||  |||||||||    
T  5396769 aaagattgttgacccagttcggtccaatatgacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttgcaaagagttacaaga 5396672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 16623390 - 16623293
Alignment:
Q  19 aagattgttcacccagttcagc-caatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    ||||||||| ||||||||| |  |||| || |||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  16623390 aagattgttgacccagttcggttcaatatgacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaaga 16623293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 3796618 - 3796519
Alignment:
Q  17 caaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    ||||||||||| ||||||||| | ||||| || |||||| |||||||||||||| ||||| |||||| ||||| |||||||||||||||| |||||||||    
T  3796618 caaagattgttgacccagttccgtccaatatgacctaatatgggggagagagcaactctctaatccactatgatgaaagtgttacaaaagagttacaaga 3796519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 38152536 - 38152449
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatat-gagaaagtgttacaaaag 104  Q
    ||||||||| ||||||||| | ||||| || | |||||||||||||||||||||||||||||||| ||| | ||||||||||||||||    
T  38152536 aagattgttgacccagttcggtccaatatgacataatctgggggagagagcagctctccaatccactatggtgaaagtgttacaaaag 38152449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 5143260 - 5143345
Alignment:
Q  20 agattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaa 103  Q
    |||||||| ||| ||||| | ||||| || |||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||    
T  5143260 agattgttgacctagttcggtccaatatgacctaatctgggggagagagcagctctccaacccactatgatgaaagtgttacaaaa 5143345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 5269288 - 5269204
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 101  Q
    ||||||||| ||| ||||| | ||||| || ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||    
T  5269288 aagattgttgacctagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaa 5269204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 24333809 - 24333896
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 104  Q
    ||||||||| || |||||| | ||||| || |||||| ||||||||||||||||||||||||||| ||||| ||| ||||||||||||    
T  24333809 aagattgttaactcagttcggtccaatatgacctaatttgggggagagagcagctctccaatccactatgatgaacgtgttacaaaag 24333896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 5147678 - 5147763
Alignment:
Q  20 agattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaa 103  Q
    |||||||| ||||||||| | ||||| || |||||| |||||||| ||||||||||||| |||| ||||| |||||||||||||||    
T  5147678 agattgttgacccagttcggtccaatatgacctaatttgggggagggagcagctctccagtccattatgatgaaagtgttacaaaa 5147763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 51 - 113
Target Start/End: Complemental strand, 16630744 - 16630680
Alignment:
Q  51 taatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    |||||||| ||||||| ||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  16630744 taatctggaggagagaacagctctccaatccactatgatgaaagtgttacaaaagagttacaaga 16630680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 3777550 - 3777645
Alignment:
Q  20 agattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 113  Q
    |||||||| ||||||||| | ||||| |  |||||||| | |||||||| |||||||||||||| ||||| ||||||||||||||  |||||||||    
T  3777550 agattgttgacccagttcggtccaatataacctaatctagaggagagagtagctctccaatccactatgatgaaagtgttacaaagagttacaaga 3777645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 197 - 276
Target Start/End: Complemental strand, 28468404 - 28468325
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    |||||||||| ||||||| |||||||||||||||||||  ||| | ||||||||||| |||||    |||||||||||||    
T  28468404 acccaaggtgtttacaatatttttcccaacccaagagatcctcactacaaagacacttaaccctagagttccctcctttg 28468325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 6743507 - 6743425
Alignment:
Q  24 tgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 104  Q
    |||| ||||||||| | ||||| || ||||||||  ||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  6743507 tgttgacccagttcggtccaatatgacctaatctacgggagagagcagccctccaatccactatgatgaaagtgttacaaaag 6743425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 256
Target Start/End: Original strand, 5112466 - 5112523
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaa 256  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| ||||||||||||||||    
T  5112466 acccaaggtgtttacaatgttt--cccaacccaagagaacctcacaacaaagacactcaa 5112523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 259
Target Start/End: Original strand, 3777778 - 3777838
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 259  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  3777778 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 3777838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 5396539 - 5396479
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 259  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  5396539 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 5396479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 16623161 - 16623101
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 259  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  16623161 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 16623101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 16628740 - 16628680
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 259  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  16628740 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 16628680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 259
Target Start/End: Complemental strand, 5269066 - 5269008
Alignment:
Q  199 ccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 259  Q
    |||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  5269066 ccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 5269008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 256
Target Start/End: Complemental strand, 6743283 - 6743226
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaa 256  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | ||||||||||||||    
T  6743283 acccaaggtgtttacaatgttt--cccaacccaagagatcctcgctacaaagacactcaa 6743226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 16931789 - 16931849
Alignment:
Q  23 ttgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatcca 82  Q
    ||||| ||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  16931789 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 16931849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 16934143 - 16934203
Alignment:
Q  23 ttgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatcca 82  Q
    ||||| ||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  16934143 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 16934203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 22780373 - 22780433
Alignment:
Q  23 ttgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatcca 82  Q
    ||||| ||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  22780373 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 22780433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 259
Target Start/End: Complemental strand, 25861898 - 25861841
Alignment:
Q  200 caaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 259  Q
    ||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  25861898 caaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 25861841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 44599838 - 44599898
Alignment:
Q  23 ttgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatcca 82  Q
    ||||| ||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  44599838 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 44599898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 222; Significance: 1e-122; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 19 - 279
Target Start/End: Complemental strand, 22173279 - 22173018
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga-ctct 117  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22173279 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaactct 22173180  T
Q  118 agccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||  | ||||||||||||||||||||||||||||||||||    
T  22173179 agccttcaagctttacacatgaacaaaccctagattctaccctttggtgtttccccactctcctaatatgaaccctaaaacccaaggtgattacaatgtt 22173080  T
Q  218 tttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgcta 279  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22173079 tttcccaacccaagagacactctcaacaaagacactcaacccattggttccctactttgcta 22173018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 18656436 - 18656677
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 118  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18656436 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 18656535  T
Q  119 gccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgttt 218  Q
    || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||    
T  18656536 gcattcaagctttacacatgaacaaaccctaga-tctaccctttggtattttcccactctcacactataaacccttaatcccaaggtgattacaatgttt 18656634  T
Q  219 ttcccaacccaagagacactctcaacaaagacactcaacccat 261  Q
    ||||||||| |||| ||||||||| ||||| ||| || |||||    
T  18656635 ttcccaacctaagaaacactctcatcaaaggcacacaccccat 18656677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 19 - 248
Target Start/End: Complemental strand, 2677171 - 2676939
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactct 117  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||    
T  2677171 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatct 2677072  T
Q  118 agcct-tcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgt 216  Q
    ||| | |||||||||||||||||  |||||||||| ||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||    
T  2677071 agcttatcaagctttacacatgacaaaaccctaga-tctaccctttggtattttcccatcctcacactatgaaccctaaatcccaaggtgattacaatgt 2676973  T
Q  217 --ttttcccaacccaagagacactctcaacaaag 248  Q
      ||||||||||| |||| ||||||||| |||||    
T  2676972 tgttttcccaacctaagaaacactctcatcaaag 2676939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 19 - 248
Target Start/End: Complemental strand, 2673015 - 2672783
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactct 117  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||    
T  2673015 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatct 2672916  T
Q  118 agcct-tcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgt 216  Q
    ||| | |||||||||||||||||  |||||||||| ||||||||||||||||||||||  ||||||||||||||| |||| |||||||||||||||||||    
T  2672915 agcttatcaagctttacacatgacaaaaccctaga-tctaccctttggtattttcccatcctcacactatgaaccttaaatcccaaggtgattacaatgt 2672817  T
Q  217 --ttttcccaacccaagagacactctcaacaaag 248  Q
      ||||||||||| |||| ||||||||| |||||    
T  2672816 tgttttcccaacctaagaaacactctcatcaaag 2672783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 19 - 197
Target Start/End: Complemental strand, 28503960 - 28503780
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaag--actc 116  Q
    ||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  28503960 aagattgttgacccagttcagccaatatggcctaatctggggaagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaaactc 28503861  T
Q  117 tagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  28503860 tagccttcaagctttacacaagaataaaccctagattctaccctttggtgtttccccactctcacaatatgaaccctaaaa 28503780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 19 - 248
Target Start/End: Original strand, 24968108 - 24968340
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactct 117  Q
    ||||||||| ||||||||||||||||||||| |||| | |||||||||| ||||||||||||||||||| ||| |||||||||||| ||||||||| |||    
T  24968108 aagattgttgacccagttcagccaatgtggcttaattttggggagagagtagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatct 24968207  T
Q  118 agc-cttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgt 216  Q
    |||  |||||||||||||||||||||||||| ||| |||||||||||||| |||||||  |||||||||||||||||||| |||||||||||||||||||    
T  24968208 agctattcaagctttacacatgaacaaacccgaga-tctaccctttggtactttcccatcctcacactatgaaccctaaatcccaaggtgattacaatgt 24968306  T
Q  217 --ttttcccaacccaagagacactctcaacaaag 248  Q
      ||||||||||| |||| ||||||||| |||||    
T  24968307 tgttttcccaacctaagatacactctcatcaaag 24968340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 19 - 248
Target Start/End: Original strand, 8512218 - 8512450
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactct 117  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||    
T  8512218 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatct 8512317  T
Q  118 agcct-tcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgt 216  Q
    ||| | |||||||||||||| ||  ||||||||||  ||||||||||||| |||||||  ||||||||||||||||  || |||||||||||||||||||    
T  8512318 agcttatcaagctttacacaagacaaaaccctaga-cctaccctttggtaatttcccaacctcacactatgaacccataatcccaaggtgattacaatgt 8512416  T
Q  217 --ttttcccaacccaagagacactctcaacaaag 248  Q
      ||||||||||| |||| ||||||||| |||||    
T  8512417 tgttttcccaacctaagatacactctcatcaaag 8512450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 19 - 248
Target Start/End: Original strand, 8517098 - 8517330
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactct 117  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||    
T  8517098 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatct 8517197  T
Q  118 agcct-tcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgt 216  Q
    ||| | |||||||||||||| ||  ||||||||||  ||||||||||||| |||||||  ||||||||||||||||  || |||||||||||||||||||    
T  8517198 agcttatcaagctttacacaagacaaaaccctaga-cctaccctttggtaatttcccaacctcacactatgaacccataatcccaaggtgattacaatgt 8517296  T
Q  217 --ttttcccaacccaagagacactctcaacaaag 248  Q
      ||||||||||| |||| ||||||||| |||||    
T  8517297 tgttttcccaacctaagatacactctcatcaaag 8517330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 19 - 197
Target Start/End: Original strand, 7167245 - 7167425
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--act 115  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||  ||     
T  7167245 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaaca 7167344  T
Q  116 ctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
     |||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  7167345 atagccttcaagc-ttacacaagaacaaaccctagattctaccctttggtatttccccactctcacaatatgaaccctaaaa 7167425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 62 - 197
Target Start/End: Complemental strand, 28501750 - 28501613
Alignment:
Q  62 agagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaaga--ctctagccttcaagctttacacatgaacaaaccctagattctaccc 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||| ||||||||||||||||||    
T  28501750 agagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagaaactctagccttcaagctttacacaagaataaaccctagattctaccc 28501651  T
Q  160 tttggtattttcccactctcacactatgaaccctaaaa 197  Q
    |||||| ||| |||||||||||| ||||||||||||||    
T  28501650 tttggtgtttccccactctcacaatatgaaccctaaaa 28501613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 19 - 194
Target Start/End: Complemental strand, 8739159 - 8738982
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--act 115  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||  ||     
T  8739159 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaaca 8739060  T
Q  116 ctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaacccta 194  Q
     |||||||||||| ||||||| |||||| ||||||||||||||| |  |||||| |||||||||||| |||||||||||    
T  8739059 atagccttcaagc-ttacacaagaacaatccctagattctacccatatgtatttccccactctcacaatatgaacccta 8738982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 19 - 194
Target Start/End: Complemental strand, 9091397 - 9091220
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--act 115  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||  ||     
T  9091397 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaaca 9091298  T
Q  116 ctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaacccta 194  Q
     |||||||||||| ||||||| |||||| ||||||||||||||| |  |||||| |||||||||||| |||||||||||    
T  9091297 atagccttcaagc-ttacacaagaacaatccctagattctacccatatgtatttccccactctcacaatatgaacccta 9091220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 19 - 248
Target Start/End: Original strand, 32475486 - 32475717
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||||||  ||||||||| ||||    
T  32475486 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgt-ttacaaagagttacaagaatcta 32475584  T
Q  119 gcct-tcaagctttacacatgaacaaaccctagattctaccctttggt-attttcccactctcacactatgaaccctaaaacccaaggtgattacaatgt 216  Q
    || | |||||||||||||| ||  ||||||||||  |||||||||| | | |||||||  ||||||||||||||||  || |||||| ||||||||||||    
T  32475585 gcttatcaagctttacacaagacaaaaccctaga-cctaccctttgataaatttcccaacctcacactatgaacccataatcccaagatgattacaatgt 32475683  T
Q  217 --ttttcccaacccaagagacactctcaacaaag 248  Q
      ||||||||||| ||||  |||||||| |||||    
T  32475684 tgttttcccaacctaagattcactctcatcaaag 32475717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 19 - 248
Target Start/End: Original strand, 32480344 - 32480575
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 118  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||||||  ||||||||| ||||    
T  32480344 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgt-ttacaaagagttacaagaatcta 32480442  T
Q  119 gcct-tcaagctttacacatgaacaaaccctagattctaccctttggt-attttcccactctcacactatgaaccctaaaacccaaggtgattacaatgt 216  Q
    || | |||||||||||||| ||  ||||||||||  |||||||||| | | |||||||  ||||||||||||||||  || |||||| ||||||||||||    
T  32480443 gcttatcaagctttacacaagacaaaaccctaga-cctaccctttgataaatttcccaacctcacactatgaacccataatcccaagatgattacaatgt 32480541  T
Q  217 --ttttcccaacccaagagacactctcaacaaag 248  Q
      ||||||||||| ||||  |||||||| |||||    
T  32480542 tgttttcccaacctaagattcactctcatcaaag 32480575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 19 - 197
Target Start/End: Original strand, 8477363 - 8477545
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--act 115  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||  ||     
T  8477363 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaaca 8477462  T
Q  116 ctagccttcaagctttacac-atgaacaaaccctagattctaccctttggtattt-tcccactctcacactatgaaccctaaaa 197  Q
     |||| | ||||| |||||| || |||||  |||||||||||||||||||| |||  |||||||||||| ||||||||||||||    
T  8477463 atagcttgcaagc-ttacacaataaacaagacctagattctaccctttggtgtttcccccactctcacaatatgaaccctaaaa 8477545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 19 - 197
Target Start/End: Complemental strand, 40372891 - 40372712
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-actc 116  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |       
T  40372891 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaaaa 40372792  T
Q  117 tagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
    |||| | ||||| ||||||| |||||| ||||||||||||||| |  || ||| |||||||||| | ||||||||||||||    
T  40372791 tagcttgcaagc-ttacacaagaacaagccctagattctacccatatgtgtttccccactctcataatatgaaccctaaaa 40372712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 19 - 197
Target Start/End: Complemental strand, 2671682 - 2671502
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--act 115  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||  ||     
T  2671682 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgatgaaagtgttacaaagggttacaagaaaca 2671583  T
Q  116 ctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
     |||  | ||||| ||||||| || ||| ||||||||||||||| |  || ||| |||||||||||| ||||||||||||||    
T  2671582 atagattgcaagc-ttacacaagaccaagccctagattctacccatatgtgtttccccactctcacaatatgaaccctaaaa 2671502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 197
Target Start/End: Complemental strand, 26928688 - 26928507
Alignment:
Q  18 aaagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag--ac 114  Q
    |||||||||| |||||||||||||||| || ||||||||||||||||||||| |||||||||||| ||||| |||||||||||||| |||||||||  |     
T  26928688 aaagattgttgacccagttcagccaatatgacctaatctgggggagagagcaactctccaatccactatgatgaaagtgttacaaagggttacaagaaaa 26928589  T
Q  115 tctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
      |||| | ||||| ||||||| ||||||  |||||||||||||| || || ||| |||||||||||| ||||||||||||||    
T  26928588 aatagcttgcaagc-ttacacaagaacaagacctagattctacccatttgtgtttccccactctcacaatatgaaccctaaaa 26928507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 197 - 277
Target Start/End: Complemental strand, 8738926 - 8738846
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgc 277  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  8738926 acccaaggtgattacaatgtttttcccaacccaagagatactctctacaaagacactcaacccattggttccctcctttgc 8738846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 197 - 276
Target Start/End: Complemental strand, 2671449 - 2671370
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  2671449 acccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttg 2671370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 197 - 276
Target Start/End: Complemental strand, 40372659 - 40372580
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  40372659 acccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttg 40372580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 197 - 276
Target Start/End: Original strand, 7167478 - 7167558
Alignment:
Q  197 acccaaggtgattacaatgtttt-tcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7167478 acccaaggtgattacaatgttttttcccaacccaagagacactctcaacaaagacactcaaccctttggttccctcctttg 7167558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 197 - 273
Target Start/End: Original strand, 8477598 - 8477674
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcct 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  8477598 acccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcct 8477674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 197 - 276
Target Start/End: Complemental strand, 9091164 - 9091085
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||    
T  9091164 acccaaggtgattacaatgtttttcccaacccaagagatactctctacaaagacactcaaccctttggttccctcctttg 9091085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 18 - 197
Target Start/End: Original strand, 32143320 - 32143501
Alignment:
Q  18 aaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-ac 114  Q
    |||||||||| ||| ||||| | ||||| || |||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| |     
T  32143320 aaagattgttgacctagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaa 32143419  T
Q  115 tctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
      |||| | ||||| ||||||| ||||||  |||||||||||||| || || ||| ||||||||| || ||||||||||||||    
T  32143420 aatagcttgcaagc-ttacacaagaacaagacctagattctacccatttgtgtttccccactctctcaatatgaaccctaaaa 32143501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 197 - 276
Target Start/End: Complemental strand, 28501560 - 28501480
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc-attggttccctcctttg 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||    
T  28501560 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcatcccttttggttccctcctttg 28501480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 197 - 276
Target Start/End: Complemental strand, 28503727 - 28503647
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc-attggttccctcctttg 276  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  28503727 acccaaggtgattacaatatttttcccaacccaagagacactctcaacaaagacactcaacccttttggttccctcctttg 28503647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 18 - 197
Target Start/End: Original strand, 1305948 - 1306128
Alignment:
Q  18 aaagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-act 115  Q
    |||||||||| |||||||||||||||| ||||||||||| ||||||| ||||||||||||||||| || || |||||||||||||| ||||||||| |      
T  1305948 aaagattgttgacccagttcagccaatatggcctaatctaggggagatagcagctctccaatccactacgatgaaagtgttacaaagggttacaagaaaa 1306047  T
Q  116 ctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
     |||  | ||||| ||||||| ||||||  | ||| |||||||| || || ||| ||||||||| || ||||||||||||||    
T  1306048 atagtttgcaagc-ttacacaagaacaagtcatagtttctacccatttgtgtttccccactctctcaatatgaaccctaaaa 1306128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 197
Target Start/End: Original strand, 27452957 - 27453138
Alignment:
Q  18 aaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-ac 114  Q
    |||||||||| | ||||||| | ||||| || ||||||| |||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| |     
T  27452957 aaagattgttgatccagttcggtccaatatgacctaatccgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaa 27453056  T
Q  115 tctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
      |||| | ||||| ||||||| ||||||  ||||  |||||||| || || ||| ||||||||| || ||||||||||||||    
T  27453057 aatagcttgcaagc-ttacacaagaacaattcctattttctacccatttgtgtttccccactctctcaatatgaaccctaaaa 27453138  T

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Target: chr3; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 8370574 - 8370477
Alignment:
Q  18 aaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 113  Q
    |||||||||| ||||||||| | ||||| || |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  8370574 aaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 8370477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 27975040 - 27974943
Alignment:
Q  18 aaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 113  Q
    |||||||||| ||||||||| | ||||| || |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  27975040 aaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 27974943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 16264349 - 16264446
Alignment:
Q  18 aaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 113  Q
    |||||||||| ||| ||||| | ||||| || |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  16264349 aaagattgttgacctagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 16264446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 18552970 - 18552873
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    ||||||||| ||||||||| | ||||| || ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  18552970 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaaga 18552873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 27986534 - 27986449
Alignment:
Q  18 aaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 101  Q
    |||||||||| ||||||||| | ||||| || |||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  27986534 aaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaa 27986449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 21711223 - 21711319
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 113  Q
    ||||||||| ||||||||| | ||||| || ||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||  |||||||||    
T  21711223 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctcaaatccactatgatgaaagtgttacaaagagttacaaga 21711319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 36029094 - 36029190
Alignment:
Q  20 agattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    |||||||| ||||||||| | ||||| || |||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  36029094 agattgttgacccagttctgtccaatatgacctaatctgggggagaaagcagctctccaatccactatgatgaaagtgttacaaaagagttacaaga 36029190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 22 - 113
Target Start/End: Complemental strand, 1736389 - 1736295
Alignment:
Q  22 attgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    |||||| ||||||||| | ||||| || ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  1736389 attgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaaga 1736295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 30709878 - 30709780
Alignment:
Q  18 aaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    |||||||||| ||||||||| | ||||| || ||||||||||||||||||||||| |||||||||| ||||| |||| ||||||||||| |||||||||    
T  30709878 aaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaattgttacaaaagagttacaaga 30709780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 33386754 - 33386669
Alignment:
Q  18 aaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 101  Q
    |||||||||| | ||||||| | ||||| || |||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  33386754 aaagattgttgatccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaa 33386669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 10207935 - 10207983
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagag 67  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  10207935 aagattgttgacccagttcagccaatgtggcctaatctgggggagagag 10207983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 48438236 - 48438311
Alignment:
Q  40 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    ||||| || ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  48438236 ccaatatgacctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaaga 48438311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 6794778 - 6794704
Alignment:
Q  40 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 113  Q
    ||||| || |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  6794778 ccaatatgacctaatatgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 6794704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 3716089 - 3715992
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    ||||||||| ||||||||| | ||||| || |||||||| || |||||||||||||||||||| | ||||| |||||||||||||||| |||||||||    
T  3716089 aagattgttgacccagttcggtccaatatgacctaatctaggagagagagcagctctccaatctactatgatgaaagtgttacaaaagagttacaaga 3715992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 40592869 - 40592772
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    ||||||||| ||||||||| | ||||| || ||||||||| ||||||||| |||||||||||| | ||||| |||||||||||||||| |||||||||    
T  40592869 aagattgttgacccagttcggtccaatatgacctaatctgtgggagagagaagctctccaatcgactatgatgaaagtgttacaaaagagttacaaga 40592772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 257
Target Start/End: Original strand, 1306179 - 1306239
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaac 257  Q
    |||||||||| |||||||||||||||||||||||||||  ||| | |||||||||||||||    
T  1306179 acccaaggtgtttacaatgtttttcccaacccaagagatcctcactacaaagacactcaac 1306239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 25795779 - 25795878
Alignment:
Q  17 caaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    ||||||||||| ||| ||||| | ||||| || |||||||||||||||||||||||||||||||| | || || ||||||||||| |||| |||||||||    
T  25795779 caaagattgttgacctagttcggtccaatatgacctaatctgggggagagagcagctctccaatctactaagatgaaagtgttacgaaagagttacaaga 25795878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 26298988 - 26299085
Alignment:
Q  19 aagattgttcacccagttcagc-caatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    ||||||||| ||||||||| |  |||| || | ||||||||||||||||||||| |||||||| | ||||| |||||||||||||||| |||||||||    
T  26298988 aagattgttgacccagttcggttcaatatgacataatctgggggagagagcagccctccaatctactatgatgaaagtgttacaaaagagttacaaga 26299085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 1417577 - 1417493
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatg-agaaagtgttacaa 101  Q
    ||||||||| ||||||||| | ||||| || ||||||||||||||||||||| | |||||||||| || | ||||||||||||||    
T  1417577 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcatccctccaatccactaagaagaaagtgttacaa 1417493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 4387019 - 4386947
Alignment:
Q  14 catcaaagattgttcacccagttcagc-caatgtggcctaatctgggggagagagcagctctccaatccaata 85  Q
    |||||||||||||| |||||||| ||  || | || |||| ||||||||||||||||||||||||||||||||    
T  4387019 catcaaagattgtttacccagtttagttcagtatgacctactctgggggagagagcagctctccaatccaata 4386947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 39040080 - 39039995
Alignment:
Q  18 aaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 101  Q
    |||||||||| ||| ||||| | ||||| || |||||||||||| ||||| || |||||||||||| ||||| |||||||||||||    
T  39040080 aaagattgttgacctagttcggtccaatatgacctaatctggggaagagaacaactctccaatccactatgatgaaagtgttacaa 39039995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 47923993 - 47923896
Alignment:
Q  19 aagattgttcacccagttc-agccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    ||||||||| ||||||||| | ||||| || |||||||| |||||||||||||| || ||||| | ||||| ||||||| |||||||| |||||||||    
T  47923993 aagattgttgacccagttcgatccaatatgacctaatctaggggagagagcagcccttcaatctactatgatgaaagtgctacaaaagagttacaaga 47923896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 259
Target Start/End: Complemental strand, 4386831 - 4386774
Alignment:
Q  200 caaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 259  Q
    |||||||||||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  4386831 caaggtgattacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccc 4386774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 276
Target Start/End: Complemental strand, 27986313 - 27986236
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    |||||||||||||    
T  27986313 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttccctcctttg 27986236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 37466291 - 37466375
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 101  Q
    ||||||||| || |||||| | ||||| || ||||||||||||||||||| ||| |||||||||| || || |||||||||||||    
T  37466291 aagattgttgacacagttcggtccaatatgacctaatctgggggagagagtagccctccaatccactaagatgaaagtgttacaa 37466375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 259
Target Start/End: Original strand, 23392106 - 23392166
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 259  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  23392106 acccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccc 23392166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 24695023 - 24694963
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 259  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  24695023 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 24694963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 26928456 - 26928396
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 259  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  26928456 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 26928396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 259
Target Start/End: Original strand, 36029322 - 36029382
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 259  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  36029322 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 36029382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 40592639 - 40592579
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 259  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  40592639 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 40592579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 40844674 - 40844748
Alignment:
Q  40 ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    ||||| || |||||||||||| |||||||||| ||| |||||| ||||| |||||||||||||||| |||||||||    
T  40844674 ccaatatgacctaatctgggg-agagagcagccctcaaatccactatgatgaaagtgttacaaaagagttacaaga 40844748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 86
Target Start/End: Original strand, 53894082 - 53894119
Alignment:
Q  49 cctaatctgggggagagagcagctctccaatccaatat 86  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  53894082 cctagtctgggggagagagcagccctccaatccaatat 53894119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 3328443 - 3328359
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 101  Q
    ||||||||| ||||||||||  ||||| || |||||||| | |||||||||||| || ||||||| || || |||||||||||||    
T  3328443 aagattgttgacccagttcattccaatatgacctaatctagaggagagagcagcccttcaatccactaagatgaaagtgttacaa 3328359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 259
Target Start/End: Original strand, 21711454 - 21711511
Alignment:
Q  200 caaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 259  Q
    ||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  21711454 caaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 21711511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 259
Target Start/End: Original strand, 23410529 - 23410586
Alignment:
Q  200 caaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 259  Q
    ||||||| ||||||||||||  |||||||||||||  ||| | |||||||||||||||||    
T  23410529 caaggtgtttacaatgtttt--ccaacccaagagaacctcactacaaagacactcaaccc 23410586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 276
Target Start/End: Original strand, 32143552 - 32143629
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    |||||||||| ||||||||||||  |||||||||||||   || | |||||||||||||||||    |||||||||||||    
T  32143552 acccaaggtgtttacaatgtttt--ccaacccaagagatcatcactacaaagacactcaaccctagagttccctcctttg 32143629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 38210629 - 38210569
Alignment:
Q  23 ttgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatcca 82  Q
    ||||| ||||||||| | ||||| || |||| | |||||||||||||||||||||||||||    
T  38210629 ttgttgacccagttcggtccaatctgacctagtatgggggagagagcagctctccaatcca 38210569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 256
Target Start/End: Complemental strand, 47923761 - 47923704
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaa 256  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | ||||||||||||||    
T  47923761 acccaaggtgtttacaatgttt--cccaacccaagagattctcactacaaagacactcaa 47923704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 50494258 - 50494198
Alignment:
Q  23 ttgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatcca 82  Q
    ||||| ||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  50494258 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 50494198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 194; Significance: 1e-105; HSPs: 2)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 19 - 232
Target Start/End: Complemental strand, 9726 - 9514
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 118  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9726 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 9627  T
Q  119 gccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgttt 218  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9626 gccttcaagctttacacatgaacaaaccctaga-tctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgttt 9528  T
Q  219 ttcccaacccaaga 232  Q
    ||||||||| ||||    
T  9527 ttcccaacctaaga 9514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 105 - 279
Target Start/End: Complemental strand, 3845 - 3671
Alignment:
Q  105 gttacaagactctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaagg 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3845 gttacaagactctagccttcaagctttacacatgaacaaaccctagat-ctaccctttggtattttcccactctcacactatgaaccctaaaacccaagg 3747  T
Q  205 tgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccca-ttggttccctcctttgcta 279  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  3746 tgattacaatgtttttcctaacctaagagacactctcaacaaagacactcaacccatttggttccctcctttgcta 3671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 364 - 605
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaaggttacaagactcta 118  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  364 aagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccaatatgtgaa-gtgttacaaaaggttacaagactcta 462  T
Q  119 gcct-tcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgtt 217  Q
    || | |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  463 gcttatcaagctttacacatgaacaaaccctagaa-ctaccctttggtattttcccactctcacactatgaacccaaaatcccaaggtgattacaatgtt 561  T
Q  218 tttcccaacccaagagacactctcaacaaagacactcaacccat 261  Q
    |||||||||| |||| || |||||| ||||| ||| || |||||    
T  562 tttcccaacctaagaaactctctcatcaaaggcacacaccccat 605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 127; Significance: 1e-65; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 19 - 248
Target Start/End: Complemental strand, 14393 - 14161
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactct 117  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| |||    
T  14393 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatct 14294  T
Q  118 agcct-tcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgt 216  Q
    ||| | |||||||||||||| ||  ||||||||||  ||||||||||||| |||||||  ||||||||||||||||  || |||||||||||||||||||    
T  14293 agcttatcaagctttacacaagacaaaaccctaga-cctaccctttggtaatttcccaacctcacactatgaacccataatcccaaggtgattacaatgt 14195  T
Q  217 --ttttcccaacccaagagacactctcaacaaag 248  Q
      ||||||||||| |||| ||||||||| |||||    
T  14194 tgttttcccaacctaagatacactctcatcaaag 14161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 19 - 248
Target Start/End: Complemental strand, 19249 - 19017
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactct 117  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||  |||||||||||| ||||||||| |||    
T  19249 aagattgttgacccagttcagccattgtggcctaatctgggggagagagcagctctccaatacaatatgtgagtgtgttacaaaagagttacaagaatct 19150  T
Q  118 agcct-tcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgt 216  Q
    ||| | |||||||||||||| ||  |||||||||| |||||||||||||| |||||||  ||||||||||||||||  ||  ||||||||||||||||||    
T  19149 agcttatcaagctttacacaagacaaaaccctaga-tctaccctttggtaatttcccaacctcacactatgaacccataattccaaggtgattacaatgt 19051  T
Q  217 --ttttcccaacccaagagacactctcaacaaag 248  Q
      ||||||||||| |||| ||||||||| |||||    
T  19050 tgttttcccaacctaagaaacactctcatcaaag 19017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 19 - 248
Target Start/End: Complemental strand, 2335 - 2103
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactct 117  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||| ||||||||| |||    
T  2335 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagtagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatct 2236  T
Q  118 agcct-tcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgt 216  Q
    ||| | |||||||||||||| ||  ||||| |||| |||||||||||||| |||||||  ||||||||||||||||  || |||||||||||||||||||    
T  2235 agcttatcaagctttacacaagacaaaaccataga-tctaccctttggtaatttcccaacctcacactatgaacccataatcccaaggtgattacaatgt 2137  T
Q  217 --ttttcccaacccaagagacactctcaacaaag 248  Q
      ||||||||||| |||| ||||||||| |||||    
T  2136 tgttttcccaacctaagatacactctcatcaaag 2103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 19 - 248
Target Start/End: Complemental strand, 149040 - 148808
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatgagaaagtgttacaaaag-gttacaagactct 117  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||| ||||||||| |||    
T  149040 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagtagctctccaatccaatatgtgaatgtgttacaaaagagttacaagaatct 148941  T
Q  118 agcct-tcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgt 216  Q
    ||| | |||||||||||||| ||  ||||| |||| |||||||||||||| |||||||  ||||||||||||||||  || |||||||||||||||||||    
T  148940 agcttatcaagctttacacaagacaaaaccataga-tctaccctttggtaatttcccaacctcacactatgaacccataatcccaaggtgattacaatgt 148842  T
Q  217 --ttttcccaacccaagagacactctcaacaaag 248  Q
      ||||||||||| |||| ||||||||| |||||    
T  148841 tgttttcccaacctaagatacactctcatcaaag 148808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 82; Significance: 9e-39; HSPs: 4)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 18 - 197
Target Start/End: Complemental strand, 18049 - 17869
Alignment:
Q  18 aaagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-act 115  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| |      
T  18049 aaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaa 17950  T
Q  116 ctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
     |||| | ||||| ||||||| ||||||  | ||| |||||||| || || ||| |||||||||||| ||||||||||||||    
T  17949 atagcttgcaagc-ttacacaagaacaagtcatagtttctacccatttgtgtttccccactctcacaatatgaaccctaaaa 17869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 18 - 197
Target Start/End: Complemental strand, 24142 - 23962
Alignment:
Q  18 aaagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaag-act 115  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| |      
T  24142 aaagattgttgacccagttcagccaatatggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagggttacaagaaaa 24043  T
Q  116 ctagccttcaagctttacacatgaacaaaccctagattctaccctttggtattttcccactctcacactatgaaccctaaaa 197  Q
     |||| | ||||| ||||||| ||||||  | ||| |||||||| || || ||| |||||||||||| ||||||||||||||    
T  24042 atagcttgcaagc-ttacacaagaacaagtcatagtttctacccatttgtgtttccccactctcacaatatgaaccctaaaa 23962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 197 - 276
Target Start/End: Complemental strand, 17818 - 17739
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||    |||||||||||||    
T  17818 acccaaggtgattacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagagttccctcctttg 17739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 197 - 276
Target Start/End: Complemental strand, 23911 - 23832
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||    |||||||||||||    
T  23911 acccaaggtgattacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagagttccctcctttg 23832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 182048 - 181980
Alignment:
Q  19 aagattgttcacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatg 87  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  182048 aagattgttgacccagttcagccaatgtggcctaatctgggggagagagcagctctccaatccaatatg 181980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 154 - 248
Target Start/End: Complemental strand, 176925 - 176829
Alignment:
Q  154 ctaccctttggtattttcccactctcacactatgaaccctaaaacccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 248  Q
    ||||||||||||| |||||||  ||||||||||||||||  || |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  176925 ctaccctttggtaatttcccaacctcacactatgaacccataatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 176829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 8517 - 8420
Alignment:
Q  18 aaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 113  Q
    |||||||||| ||||||||| | ||||| || |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  8517 aaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 8420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 276
Target Start/End: Complemental strand, 8285 - 8208
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    |||||||||||||    
T  8285 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttccctcctttg 8208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 85684 - 85779
Alignment:
Q  20 agattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 113  Q
    |||||||| ||||||||||| ||||| || |||||||||||||||||||| |||||||||||||  |||| ||||||||||||||  |||||||||    
T  85684 agattgttgacccagttcagtccaatatgacctaatctgggggagagagcggctctccaatccaccatgatgaaagtgttacaaagagttacaaga 85779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 46; Significance: 3e-17; HSPs: 3)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 44059 - 43962
Alignment:
Q  18 aaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 113  Q
    |||||||||| ||||||||| | ||||| ||  ||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||||||||    
T  44059 aaagattgttgacccagttcggtccaatatgatctattctgggggagagagcagctctccaatccactatgatgaaagtgttacaaagagttacaaga 43962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 36930 - 36833
Alignment:
Q  18 aaagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 113  Q
    |||||||||| ||||||||| | ||||| || |||||||| ||| |||||||||||| |||| ||| ||||| ||||||||||||||  |||||||||    
T  36930 aaagattgttgacccagttcggtccaatatgacctaatctagggaagagagcagctcgccaacccactatgatgaaagtgttacaaagagttacaaga 36833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 36700 - 36640
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 259  Q
    |||||||||| ||||||||||||  |||||||||||||  ||| | |||||||||||||||||    
T  36700 acccaaggtgtttacaatgtttt--ccaacccaagagatcctcactacaaagacactcaaccc 36640  T

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Target: scaffold0006 (Bit Score: 44; Significance: 4e-16; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 5683 - 5770
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 104  Q
    ||||||||| ||||||||| | ||||| || ||||||||||||||||||||||| || ||||||| ||||| ||||||||||||||||    
T  5683 aagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagcccttcaatccactatgatgaaagtgttacaaaag 5770  T

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Target: scaffold0006; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 2492 - 2579
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag 104  Q
    ||||||||| |||||||||   ||||| || |||||||||||||||| |||||| |||||||||| ||||| ||||||||||||||||    
T  2492 aagattgttgacccagttcgctccaatatgacctaatctgggggagacagcagccctccaatccactatgatgaaagtgttacaaaag 2579  T

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Target: scaffold0006; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 133346 - 133281
Alignment:
Q  49 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaaggttacaaga 113  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||| |||||||||  |||||||||    
T  133346 cctaatatgggggagagagcagctctccaatccactatgatgaaaatgttacaaagagttacaaga 133281  T

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Target: scaffold0006; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 276
Target Start/End: Complemental strand, 133147 - 133070
Alignment:
Q  197 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 276  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | ||||||| |||||||||    |||||||||||||    
T  133147 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagaaactcaaccctaaagttccctcctttg 133070  T

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Target: scaffold0148 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 10729 - 10826
Alignment:
Q  19 aagattgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaaaag-gttacaaga 113  Q
    |||||| || ||||||||| | ||||| || |||||| ||||||||||||||||||||||||||| || || |||||||||||||||| |||||||||    
T  10729 aagattattgacccagttcggtccaatatgacctaatttgggggagagagcagctctccaatccactaagatgaaagtgttacaaaagagttacaaga 10826  T

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Target: scaffold0098 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 45284 - 45337
Alignment:
Q  49 cctaatctgggggagagagcagctctccaatccaatatga-gaaagtgttacaa 101  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||| |||||||    
T  45284 cctaatctgggggagagagcagctctccaatccactatgatgaaagcgttacaa 45337  T

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Target: scaffold0154 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 82
Target Start/End: Original strand, 11500 - 11533
Alignment:
Q  49 cctaatctgggggagagagcagctctccaatcca 82  Q
    |||| |||||||||||||||||||||||||||||    
T  11500 cctagtctgggggagagagcagctctccaatcca 11533  T

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Target: scaffold0267 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 329 - 269
Alignment:
Q  23 ttgttcacccagttcag-ccaatgtggcctaatctgggggagagagcagctctccaatcca 82  Q
    ||||| ||||||||| | ||||| || |||| |||||||||||||||||| ||||||||||    
T  329 ttgttgacccagttcggtccaatctgacctagtctgggggagagagcagccctccaatcca 269  T

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