View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18975_high_2 (Length: 616)

Name: NF18975_high_2
Description: NF18975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18975_high_2
NF18975_high_2
[»] scaffold0018 (5 HSPs)
scaffold0018 (277-560)||(72106-72386)
scaffold0018 (78-316)||(71867-72116)
scaffold0018 (18-77)||(71740-71799)
scaffold0018 (120-204)||(72106-72190)
scaffold0018 (279-361)||(71909-71990)
[»] chr3 (59 HSPs)
chr3 (120-362)||(26498547-26498795)
chr3 (115-258)||(48755322-48755465)
chr3 (118-365)||(38498133-38498386)
chr3 (113-258)||(15031181-15031326)
chr3 (113-265)||(33342999-33343150)
chr3 (115-258)||(1426479-1426622)
chr3 (116-258)||(21514740-21514882)
chr3 (116-226)||(42453039-42453149)
chr3 (191-365)||(15031323-15031503)
chr3 (115-369)||(20758954-20759214)
chr3 (127-258)||(44967862-44967993)
chr3 (191-369)||(11989037-11989221)
chr3 (120-256)||(18445548-18445684)
chr3 (191-371)||(33343108-33343293)
chr3 (117-273)||(7300145-7300300)
chr3 (115-219)||(39541669-39541773)
chr3 (151-258)||(11989186-11989293)
chr3 (120-223)||(15031396-15031499)
chr3 (120-223)||(26498548-26498651)
chr3 (115-265)||(43562734-43562884)
chr3 (120-223)||(38498279-38498382)
chr3 (129-223)||(20759103-20759197)
chr3 (120-223)||(11989045-11989148)
chr3 (191-366)||(21514847-21515028)
chr3 (116-258)||(26920152-26920293)
chr3 (138-223)||(39541786-39541871)
chr3 (155-223)||(48755504-48755572)
chr3 (114-196)||(33412198-33412280)
chr3 (191-328)||(48755430-48755574)
chr3 (119-223)||(41984904-41985008)
chr3 (155-223)||(44968031-44968098)
chr3 (187-258)||(15005025-15005096)
chr3 (120-223)||(15005134-15005237)
chr3 (213-328)||(44967980-44968100)
chr3 (185-258)||(14434781-14434854)
chr3 (276-361)||(48755327-48755412)
chr3 (191-360)||(14434641-14434816)
chr3 (119-223)||(18445404-18445508)
chr3 (121-223)||(14434641-14434743)
chr3 (276-333)||(1426669-1426726)
chr3 (276-333)||(39541804-39541861)
chr3 (155-223)||(1426651-1426719)
chr3 (191-258)||(15031291-15031358)
chr3 (120-223)||(33343180-33343283)
chr3 (194-365)||(15005064-15005241)
chr3 (276-361)||(15031188-15031273)
chr3 (276-361)||(26498710-26498795)
chr3 (276-361)||(33343006-33343091)
chr3 (277-367)||(43562603-43562695)
chr3 (274-362)||(18445597-18445685)
chr3 (115-223)||(26920331-26920439)
chr3 (279-361)||(39541674-39541756)
chr3 (276-361)||(1426484-1426569)
chr3 (167-258)||(26840038-26840126)
chr3 (191-251)||(1426587-1426647)
chr3 (229-265)||(15031265-15031301)
chr3 (178-214)||(39229147-39229183)
chr3 (229-265)||(48755404-48755440)
chr3 (338-366)||(48755553-48755581)
[»] chr4 (76 HSPs)
chr4 (115-367)||(22017876-22018134)
chr4 (115-265)||(2634158-2634308)
chr4 (117-263)||(55382692-55382838)
chr4 (115-258)||(10380736-10380879)
chr4 (119-265)||(5448195-5448341)
chr4 (116-258)||(30470959-30471101)
chr4 (142-265)||(18830708-18830831)
chr4 (114-265)||(30378737-30378887)
chr4 (118-256)||(37695075-37695213)
chr4 (115-265)||(47943582-47943732)
chr4 (116-323)||(8951058-8951271)
chr4 (191-369)||(10757562-10757746)
chr4 (191-369)||(10970733-10970917)
chr4 (114-258)||(3369959-3370103)
chr4 (118-270)||(29908887-29909039)
chr4 (116-258)||(1387483-1387626)
chr4 (194-368)||(37694893-37695073)
chr4 (118-258)||(2063144-2063284)
chr4 (140-258)||(11821743-11821861)
chr4 (120-265)||(9826632-9826777)
chr4 (191-369)||(30470810-30470994)
chr4 (191-364)||(2634021-2634200)
chr4 (155-265)||(18836413-18836523)
chr4 (191-362)||(18830574-18830750)
chr4 (276-365)||(2063340-2063429)
chr4 (200-366)||(5324678-5324850)
chr4 (191-365)||(5448299-5448479)
chr4 (113-214)||(47463807-47463908)
chr4 (129-265)||(2232505-2232640)
chr4 (127-223)||(22017889-22017985)
chr4 (120-223)||(2063322-2063425)
chr4 (141-258)||(5324824-5324937)
chr4 (120-223)||(5448372-5448475)
chr4 (200-372)||(12140656-12140834)
chr4 (200-361)||(30378854-30379017)
chr4 (120-221)||(10757570-10757671)
chr4 (120-221)||(10970741-10970842)
chr4 (120-224)||(37694900-37695004)
chr4 (120-223)||(18830575-18830677)
chr4 (276-362)||(47463813-47463899)
chr4 (191-362)||(11821826-11822007)
chr4 (205-366)||(2232367-2232533)
chr4 (120-223)||(12140667-12140770)
chr4 (194-273)||(18500704-18500783)
chr4 (120-223)||(18836280-18836382)
chr4 (113-172)||(47463916-47463975)
chr4 (195-265)||(1387444-1387514)
chr4 (121-223)||(5324684-5324786)
chr4 (114-271)||(47144712-47144872)
chr4 (276-361)||(55382750-55382835)
chr4 (119-223)||(9826808-9826912)
chr4 (114-190)||(11821936-11822012)
chr4 (117-265)||(18500596-18500743)
chr4 (120-223)||(2634024-2634127)
chr4 (191-363)||(18836278-18836454)
chr4 (144-223)||(30470842-30470921)
chr4 (279-370)||(55382569-55382660)
chr4 (191-261)||(1387416-1387486)
chr4 (204-265)||(10757704-10757765)
chr4 (204-265)||(10970875-10970936)
chr4 (120-189)||(30378948-30379017)
chr4 (155-223)||(3391183-3391251)
chr4 (212-330)||(1387310-1387433)
chr4 (194-273)||(10380689-10380768)
chr4 (152-223)||(47144865-47144935)
chr4 (223-265)||(5324849-5324891)
chr4 (150-223)||(2232402-2232475)
chr4 (276-361)||(30471012-30471097)
chr4 (200-265)||(37695034-37695099)
chr4 (120-189)||(55382578-55382647)
chr4 (274-362)||(9826631-9826719)
chr4 (158-224)||(8951058-8951124)
chr4 (276-361)||(22018044-22018129)
chr4 (276-361)||(47943642-47943727)
chr4 (193-258)||(55382665-55382730)
chr4 (191-251)||(3370068-3370128)
[»] chr2 (17 HSPs)
chr2 (155-369)||(32092751-32092971)
chr2 (139-265)||(22092879-22093005)
chr2 (113-258)||(31819908-31820052)
chr2 (115-265)||(39598641-39598791)
chr2 (155-258)||(31499491-31499594)
chr2 (120-221)||(32092759-32092860)
chr2 (115-265)||(24007014-24007164)
chr2 (130-265)||(8219150-8219284)
chr2 (276-373)||(24006868-24006965)
chr2 (191-368)||(22092963-22093146)
chr2 (155-223)||(24006915-24006983)
chr2 (191-271)||(39598603-39598683)
chr2 (158-220)||(22093039-22093101)
chr2 (276-361)||(39598701-39598786)
chr2 (151-225)||(17914037-17914110)
chr2 (191-271)||(31820017-31820097)
chr2 (276-328)||(32092921-32092973)
[»] chr7 (37 HSPs)
chr7 (115-364)||(36150843-36151098)
chr7 (130-265)||(27508586-27508721)
chr7 (113-265)||(38761126-38761278)
chr7 (113-364)||(43257261-43257518)
chr7 (191-366)||(27508679-27508860)
chr7 (155-258)||(6441485-6441588)
chr7 (115-265)||(5080243-5080393)
chr7 (151-258)||(14197600-14197707)
chr7 (115-264)||(3404453-3404601)
chr7 (200-366)||(38760989-38761159)
chr7 (116-258)||(15000641-15000784)
chr7 (194-363)||(14197457-14197632)
chr7 (130-258)||(37787828-37787952)
chr7 (191-359)||(5080111-5080285)
chr7 (120-223)||(27508752-27508855)
chr7 (127-223)||(15272330-15272426)
chr7 (191-328)||(6441378-6441520)
chr7 (191-362)||(45012848-45013024)
chr7 (120-210)||(45013060-45013150)
chr7 (120-221)||(3404634-3404735)
chr7 (122-223)||(5080111-5080212)
chr7 (191-369)||(15000749-15000933)
chr7 (113-194)||(29934472-29934553)
chr7 (127-223)||(15000822-15000918)
chr7 (276-364)||(15272320-15272408)
chr7 (120-223)||(45012849-45012951)
chr7 (155-223)||(6441380-6441447)
chr7 (188-256)||(45012991-45013059)
chr7 (276-366)||(3404650-3404740)
chr7 (276-361)||(38761186-38761271)
chr7 (120-223)||(36150992-36151095)
chr7 (276-362)||(5080303-5080389)
chr7 (129-223)||(38761002-38761095)
chr7 (276-361)||(27508577-27508661)
chr7 (155-223)||(14197494-14197562)
chr7 (120-223)||(43257264-43257367)
chr7 (147-224)||(4617287-4617364)
[»] chr8 (44 HSPs)
chr8 (120-366)||(12106862-12107114)
chr8 (113-265)||(25149372-25149524)
chr8 (115-258)||(21124322-21124465)
chr8 (115-258)||(35202593-35202736)
chr8 (118-265)||(22426845-22426991)
chr8 (114-256)||(21184293-21184434)
chr8 (118-258)||(18323997-18324135)
chr8 (120-265)||(37543926-37544071)
chr8 (118-265)||(22469566-22469713)
chr8 (118-257)||(23976233-23976370)
chr8 (120-223)||(12106867-12106970)
chr8 (132-258)||(4289066-4289192)
chr8 (191-361)||(25149238-25149414)
chr8 (120-223)||(23976090-23976194)
chr8 (131-258)||(24609167-24609294)
chr8 (202-365)||(21124473-21124642)
chr8 (191-328)||(35202701-35202845)
chr8 (191-366)||(4288917-4289101)
chr8 (207-368)||(18324116-18324283)
chr8 (278-365)||(22469429-22469516)
chr8 (276-365)||(23976086-23976176)
chr8 (157-265)||(22326540-22326648)
chr8 (119-223)||(25149237-25149341)
chr8 (120-223)||(21124535-21124638)
chr8 (229-365)||(23625111-23625253)
chr8 (186-265)||(29585584-29585663)
chr8 (146-241)||(41358840-41358935)
chr8 (120-223)||(22469433-22469536)
chr8 (140-226)||(23625054-23625140)
chr8 (120-223)||(21185838-21185941)
chr8 (209-351)||(37494325-37494467)
chr8 (276-366)||(12107029-12107119)
chr8 (118-273)||(31253933-31254089)
chr8 (155-223)||(35202775-35202843)
chr8 (292-362)||(37544002-37544072)
chr8 (155-223)||(18324173-18324241)
chr8 (130-190)||(37494325-37494385)
chr8 (279-362)||(21184298-21184381)
chr8 (307-366)||(21185887-21185946)
chr8 (293-366)||(31250292-31250365)
chr8 (160-223)||(22326446-22326509)
chr8 (276-366)||(10289392-10289481)
chr8 (276-361)||(22426847-22426931)
chr8 (276-321)||(41358876-41358921)
[»] chr6 (31 HSPs)
chr6 (113-366)||(10587882-10588157)
chr6 (115-257)||(13536555-13536697)
chr6 (117-265)||(25089149-25089297)
chr6 (113-265)||(19295415-19295567)
chr6 (191-366)||(26705131-26705312)
chr6 (113-265)||(10862006-10862158)
chr6 (120-265)||(21222599-21222746)
chr6 (191-368)||(13536663-13536847)
chr6 (115-247)||(28752237-28752369)
chr6 (120-223)||(19295281-19295384)
chr6 (191-367)||(19295275-19295457)
chr6 (120-223)||(10587887-10587990)
chr6 (120-211)||(13536749-13536840)
chr6 (138-265)||(10672752-10672878)
chr6 (200-366)||(25089264-25089436)
chr6 (205-328)||(10862130-10862258)
chr6 (138-258)||(12651223-12651343)
chr6 (120-223)||(21222465-21222568)
chr6 (120-223)||(26705204-26705307)
chr6 (276-370)||(13536551-13536645)
chr6 (191-366)||(21222460-21222641)
chr6 (274-362)||(21222657-21222747)
chr6 (120-223)||(25089328-25089431)
chr6 (276-361)||(10588065-10588150)
chr6 (276-361)||(25089152-25089237)
chr6 (158-209)||(10862202-10862253)
chr6 (278-361)||(19295477-19295560)
chr6 (212-273)||(10672712-10672773)
chr6 (193-258)||(12651192-12651256)
chr6 (276-361)||(28752242-28752327)
chr6 (229-265)||(13536637-13536673)
[»] chr1 (21 HSPs)
chr1 (113-265)||(50335434-50335586)
chr1 (140-258)||(13735465-13735583)
chr1 (114-258)||(37607967-37608110)
chr1 (191-365)||(37608075-37608254)
chr1 (191-369)||(50335544-50335728)
chr1 (127-265)||(8097849-8097987)
chr1 (121-205)||(37608165-37608249)
chr1 (117-258)||(42847022-42847164)
chr1 (115-226)||(11633189-11633300)
chr1 (120-223)||(50335617-50335720)
chr1 (276-365)||(42847212-42847301)
chr1 (191-369)||(13735548-13735731)
chr1 (155-366)||(32373981-32374203)
chr1 (213-362)||(8097714-8097869)
chr1 (120-223)||(32373986-32374088)
chr1 (120-219)||(42847198-42847297)
chr1 (144-214)||(13735631-13735700)
chr1 (276-361)||(50335441-50335526)
chr1 (120-223)||(8097715-8097818)
chr1 (128-223)||(11633306-11633401)
chr1 (115-163)||(13735417-13735465)
[»] chr5 (45 HSPs)
chr5 (122-265)||(10760141-10760284)
chr5 (115-266)||(13753362-13753513)
chr5 (140-373)||(21211405-21211658)
chr5 (117-265)||(2555436-2555584)
chr5 (112-258)||(21943884-21944030)
chr5 (114-258)||(30852580-30852717)
chr5 (155-265)||(11297993-11298104)
chr5 (191-368)||(10760001-10760183)
chr5 (191-366)||(30100609-30100787)
chr5 (129-258)||(34419489-34419618)
chr5 (121-265)||(19491673-19491817)
chr5 (113-265)||(30100745-30100897)
chr5 (120-223)||(21943743-21943846)
chr5 (200-366)||(20429872-20430044)
chr5 (122-223)||(21211419-21211520)
chr5 (191-364)||(17497098-17497277)
chr5 (127-223)||(17497171-17497267)
chr5 (191-363)||(21943741-21943919)
chr5 (155-265)||(17497031-17497140)
chr5 (212-366)||(2555563-2555723)
chr5 (191-366)||(13753224-13753405)
chr5 (178-259)||(20430017-20430098)
chr5 (119-223)||(19491848-19491952)
chr5 (120-223)||(13753229-13753332)
chr5 (114-258)||(19564796-19564944)
chr5 (121-223)||(20429878-20429980)
chr5 (286-367)||(31912190-31912271)
chr5 (171-259)||(12895579-12895667)
chr5 (276-372)||(13753423-13753519)
chr5 (191-363)||(43548872-43549053)
chr5 (191-273)||(30852682-30852764)
chr5 (138-258)||(31912337-31912457)
chr5 (303-367)||(34419672-34419736)
chr5 (120-223)||(2555615-2555718)
chr5 (115-174)||(34419676-34419735)
chr5 (287-361)||(19491877-19491951)
chr5 (155-223)||(43548948-43549016)
chr5 (207-270)||(19564752-19564815)
chr5 (120-195)||(31912196-31912271)
chr5 (212-270)||(32539365-32539422)
chr5 (191-256)||(11298062-11298127)
chr5 (120-209)||(30100614-30100703)
chr5 (308-361)||(30852586-30852639)
chr5 (212-273)||(34419604-34419665)
chr5 (276-352)||(34419489-34419565)
[»] scaffold0118 (1 HSPs)
scaffold0118 (455-597)||(37123-37262)
[»] scaffold0047 (2 HSPs)
scaffold0047 (113-366)||(11599-11855)
scaffold0047 (138-223)||(11749-11832)
[»] scaffold0066 (3 HSPs)
scaffold0066 (117-258)||(15362-15503)
scaffold0066 (200-360)||(15477-15638)
scaffold0066 (121-196)||(15563-15638)
[»] scaffold0003 (2 HSPs)
scaffold0003 (168-265)||(314126-314223)
scaffold0003 (191-273)||(314181-314263)
[»] scaffold0102 (3 HSPs)
scaffold0102 (115-258)||(23887-24030)
scaffold0102 (191-368)||(23995-24177)
scaffold0102 (160-223)||(24068-24131)
[»] scaffold0011 (4 HSPs)
scaffold0011 (116-258)||(190319-190460)
scaffold0011 (205-365)||(190174-190340)
scaffold0011 (120-223)||(190178-190281)
scaffold0011 (223-265)||(190344-190386)
[»] scaffold0049 (2 HSPs)
scaffold0049 (217-355)||(59711-59855)
scaffold0049 (127-223)||(59712-59808)
[»] scaffold0024 (3 HSPs)
scaffold0024 (120-256)||(127804-127940)
scaffold0024 (119-223)||(127980-128084)
scaffold0024 (274-362)||(127803-127891)
[»] scaffold0026 (2 HSPs)
scaffold0026 (122-265)||(57451-57594)
scaffold0026 (119-223)||(57625-57729)
[»] scaffold0407 (8 HSPs)
scaffold0407 (191-367)||(830-1011)
scaffold0407 (191-367)||(7294-7475)
scaffold0407 (155-265)||(1001-1111)
scaffold0407 (155-265)||(7465-7575)
scaffold0407 (155-223)||(871-938)
scaffold0407 (155-223)||(7335-7402)
scaffold0407 (191-265)||(969-1043)
scaffold0407 (191-265)||(7433-7507)
[»] scaffold1300 (3 HSPs)
scaffold1300 (120-265)||(1357-1495)
scaffold1300 (119-223)||(1526-1630)
scaffold1300 (280-361)||(1548-1629)
[»] scaffold0039 (3 HSPs)
scaffold0039 (120-223)||(27489-27592)
scaffold0039 (120-193)||(27682-27755)
scaffold0039 (212-364)||(27486-27644)


Alignment Details
Target: scaffold0018 (Bit Score: 214; Significance: 1e-117; HSPs: 5)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 277 - 560
Target Start/End: Original strand, 72106 - 72386
Alignment:
Q  277 acattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccctttaatagtt 376  Q
    |||||||||||||| ||||||||||||  ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  72106 acattcagggactgttttgcaatttctgcacattcagggactaaagtgactacttctttcccattcagggactaaagtgactaattctcctttaatagtt 72205  T
Q  377 attggaattttgaaagaatgttactatgatgagtacattaatatcttatatatgtatatctttaattttcataagtcttcaagttggtatgttgacaatt 476  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  72206 attggaattttgaaagaatgttactatgatgagtacattaatatcttatatgtatatatctttaattttcataagtcttcaagttggtatgttgacaatt 72305  T
Q  477 taaacatgtaaggaaattctttaagattttatgtttaataagtaaatgatgaatcgttaattaggttcctgaatgaccactatt 560  Q
    || |||||| ||||||||| |||||||||||| ||||| ||||||   |||||||||||||||||||||||||| |||||||||    
T  72306 tacacatgtgaggaaattcattaagattttatttttaacaagtaa---atgaatcgttaattaggttcctgaattaccactatt 72386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 78 - 316
Target Start/End: Original strand, 71867 - 72116
Alignment:
Q  78 aactttgtatacagggtataggtatgatttaatagttgggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcag 177  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||| |||||||||||| |||||||||||||    
T  71867 aactttgtgtacagagtataggtatgatttaatagttgggagattagtgactttagtcc-tgagtaggataggggtcgtcactttaatccctgaatgcag 71965  T
Q  178 ataaattgcaaaatagtccctaaatgtagactctgt------tagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgac 271  Q
    ||||||||||||||||||||| ||| ||||     |      |||||||||||||  ||||||||| ||| |||||||||||||||| ||||||||||||    
T  71966 ataaattgcaaaatagtccctgaatatagataaattgcaaaatagtcaatttagtccctgaatgcaaactttgttagtcaatttagtccctgaaattgac 72065  T
Q  272 c------atatacattcagggactgatttgcaatttctctacattcaggga 316  Q
    |      || ||||||||||||||| ||||||||||||  |||||||||||    
T  72066 catcaaaatctacattcagggactgttttgcaatttctgcacattcaggga 72116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 71740 - 71799
Alignment:
Q  18 gaaatcatcaaggtgctaatatcaatttgccttggctcacgatacaaattgtttatttgt 77  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  71740 gaaatcatcaaggtgctaatatcaatttgccttggctcaccatacaaattgtttatttgt 71799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 72190 - 72106
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgt 204  Q
    |||||| |||||||||| ||||| |||||| ||| ||||||||||||||||||||   | ||||||||||| ||||||| |||||    
T  72190 attagtcactttagtccctgaatgggaaagaagtagtcactttagtccctgaatgtgcagaaattgcaaaacagtccctgaatgt 72106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 361
Target Start/End: Complemental strand, 71990 - 71909
Alignment:
Q  279 attcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaat 361  Q
    |||||||||||  |||||||||| ||| |||||||||||||||||||| ||  |||||| | ||| |||||||||| ||||||    
T  71990 attcagggactattttgcaatttatctgcattcagggattaaagtgacgacccctatcctactca-ggactaaagtcactaat 71909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 142; Significance: 3e-74; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 120 - 362
Target Start/End: Complemental strand, 26498795 - 26498547
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| |||||||||  ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||    
T  26498795 attagtcactttagtctctgaataggaaatgagtcatcactttagtccctgaatgcagataaattgcaaaatagtccatgaatgtagactcggttagtca 26498696  T
Q  220 atttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcagggactgatttgcaatttctctacattcag 313  Q
    |||||||  ||||||||| |||| |||||||| |||||| ||||||||||||||      | ||||||||||||||| |||||||||||||| |||||||    
T  26498695 atttagtcactgaatgcatactccgttagtcactttagtccctgaaattgaccaacatggtctacattcagggactgttttgcaatttctctgcattcag 26498596  T
Q  314 ggattaaagtgactacttctatcccattcagggactaaagtgactaatt 362  Q
    ||| |||||||||||||  | ||||||||||||||||||||||||||||    
T  26498595 ggactaaagtgactactcttttcccattcagggactaaagtgactaatt 26498547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 115 - 258
Target Start/End: Original strand, 48755322 - 48755465
Alignment:
Q  115 gggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtt 214  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||    
T  48755322 gggagattagtcactttagtccctgaataggaaaggagtcgtcactttagtctctgaatgcagataagttgcaaaatagtccctgaatgtagactctgtt 48755421  T
Q  215 agtcaatttagtttctgaatgcagactctgttagtcaatttagt 258  Q
    ||||||||||||  |||||||||||||| |||||||||||||||    
T  48755422 agtcaatttagtccctgaatgcagactccgttagtcaatttagt 48755465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 118 - 365
Target Start/End: Original strand, 38498133 - 38498386
Alignment:
Q  118 agattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagt 217  Q
    |||||||| | |||||||  ||||||| ||| ||||  ||||||||||||||||||||||||||||||||||||||||| ||||| || ||| |||||||    
T  38498133 agattagtcagtttagtctctgaatagaaaatgagtgatcactttagtccctgaatgcagataaattgcaaaatagtccataaatataaactttgttagt 38498232  T
Q  218 caatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcagggactgatttgcaatttctctacattc 311  Q
    |||||||||  ||||||| ||||||| ||||||| |||||| ||| ||||| || |      | ||||||||| ||||  |||||||||||| | |||||    
T  38498233 caatttagtccctgaatgtagactctattagtcactttagtccctaaaattaactaacaaagtctacattcagagactattttgcaatttctatgcattc 38498332  T
Q  312 agggattaaagtgactacttctatcccattcagggactaaagtgactaattccc 365  Q
    ||||| ||||||||||||| || || |||||||||| |||||||||||||||||    
T  38498333 agggactaaagtgactactcctttctcattcagggattaaagtgactaattccc 38498386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 113 - 258
Target Start/End: Original strand, 15031181 - 15031326
Alignment:
Q  113 ttgggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctg 212  Q
    ||||||||||||  |||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||    
T  15031181 ttgggagattagccactttagtccttgaatgggaaaagagtcgtcactttagtccttgaatgcagataaattgtaaaatagtccctgaatgtagactctg 15031280  T
Q  213 ttagtcaatttagtttctgaatgcagactctgttagtcaatttagt 258  Q
    ||||||||||||||  ||||||||| |||| |||||||||||||||    
T  15031281 ttagtcaatttagtccctgaatgcaaactccgttagtcaatttagt 15031326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 113 - 265
Target Start/End: Original strand, 33342999 - 33343150
Alignment:
Q  113 ttgggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctg 212  Q
    ||||||||||||| |||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||| ||    
T  33342999 ttgggagattagtcactttagtccctgaatagaaaatgagtcgtcactttagtccctgaatgcagataaattgctaaatggtccctgaatgtagactatg 33343098  T
Q  213 ttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    |||||||| |||||  ||||||||| ||| |||||||||||||||| ||||||    
T  33343099 ttagtcaa-ttagtccctgaatgcaaactatgttagtcaatttagtccctgaa 33343150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 115 - 258
Target Start/End: Original strand, 1426479 - 1426622
Alignment:
Q  115 gggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtt 214  Q
    ||||||||||| |||||||||  ||||||||||| |||||||||||||||  |||||||||||||||||||||||||||| ||| |||||||| | ||||    
T  1426479 gggagattagtcactttagtctctgaataggaaatgagtcgtcactttagatcctgaatgcagataaattgcaaaatagttcctgaatgtagattatgtt 1426578  T
Q  215 agtcaatttagtttctgaatgcagactctgttagtcaatttagt 258  Q
    ||||||||||||  |||||||||||||| |||||||||||||||    
T  1426579 agtcaatttagtccctgaatgcagactccgttagtcaatttagt 1426622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 116 - 258
Target Start/End: Original strand, 21514740 - 21514882
Alignment:
Q  116 ggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtta 215  Q
    |||||||||| ||||||||| |||||||  |||| ||||||||||||||||||||||| ||||||||||| |||||||||| | ||||||||||||||||    
T  21514740 ggagattagtcactttagtctttgaatataaaagaagtcgtcactttagtccctgaatacagataaattgtaaaatagtccttgaatgtagactctgtta 21514839  T
Q  216 gtcaatttagtttctgaatgcagactctgttagtcaatttagt 258  Q
    || ||||||||  |||||||| ||||  |||||||||||||||    
T  21514840 gttaatttagtccctgaatgcggacttcgttagtcaatttagt 21514882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 116 - 226
Target Start/End: Original strand, 42453039 - 42453149
Alignment:
Q  116 ggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtta 215  Q
    |||||||||| |||||| ||||||||||| ||| |||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||    
T  42453039 ggagattagtcactttaatccttgaatagaaaatgagtcgtcactttagtctatgaatgcaaataaattgcaaaatagtccctaaatgtagactctgtta 42453138  T
Q  216 gtcaatttagt 226  Q
    |||||||||||    
T  42453139 gtcaatttagt 42453149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 191 - 365
Target Start/End: Original strand, 15031323 - 15031503
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcag 284  Q
    ||||| || ||||||||||| |||||||||||||||  ||||||| |||||| |||||||| |||||| ||||||||||||||      | || ||| ||    
T  15031323 tagtcactgaatgtagactccgttagtcaatttagtcactgaatgtagactccgttagtcactttagtccctgaaattgaccaacaaagtctagatttag 15031422  T
Q  285 ggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattccc 365  Q
    |||||| |||||||||||||| ||||||| || |||||||||||||  | |||||||||||||||||||||||||||||||    
T  15031423 ggactgttttgcaatttctctgcattcagagactaaagtgactactcatttcccattcagggactaaagtgactaattccc 15031503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 115 - 369
Target Start/End: Original strand, 20758954 - 20759214
Alignment:
Q  115 gggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtt 214  Q
    ||||||||| | |||||| ||  |||||| ||||  ||||||||||||||||| ||||| ||||||||||| ||||||||| || ||| |||||||| ||    
T  20758954 gggagattaatcactttaatctctgaatatgaaataagtcgtcactttagtccttgaatacagataaattgtaaaatagtctctgaatatagactctatt 20759053  T
Q  215 agtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcagggactgatttgcaatttctctaca 308  Q
    ||||||||||||  ||||    ||||| ||||||||| |||||| |||||||||||| |      | |||||||| |||||  |||||||||||||| ||    
T  20759054 agtcaatttagtccctgagaatagactatgttagtcactttagtccctgaaattgactaacaaagtctacattcaaggactattttgcaatttctctgca 20759153  T
Q  309 ttcagggattaaagtgactacttctatcccattcagggactaaagtgactaattccccttt 369  Q
    |||| ||| |||| |||||||| || || |||||||||||||||  |||||||||| ||||    
T  20759154 ttcaaggactaaaatgactactcctttctcattcagggactaaaacgactaattcctcttt 20759214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 127 - 258
Target Start/End: Original strand, 44967862 - 44967993
Alignment:
Q  127 actttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaatttagt 226  Q
    |||||||||||| ||||| ||| |||| |||||||||||||||||||||| ||| |||||||||||||   | |||||||||||||||||||||||||||    
T  44967862 actttagtcctttaatagaaaatgagttgtcactttagtccctgaatgcaaatatattgcaaaatagtttttgaatgtagactctgttagtcaatttagt 44967961  T
Q  227 ttctgaatgcagactctgttagtcaatttagt 258  Q
     ||| ||| ||||| |  ||||||||||||||    
T  44967962 ctctcaatacagaccccattagtcaatttagt 44967993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 191 - 369
Target Start/End: Complemental strand, 11989221 - 11989037
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcag 284  Q
    |||||||| |||| |||||| |||| ||||||||||   | |||| |||||| ||||| || ||||||  |||||||||||||      | || ||||||    
T  11989221 tagtccctgaatgcagactccgttaatcaatttagtccttaaatgtagactccgttagccactttagtctctgaaattgaccaacagagtctatattcag 11989122  T
Q  285 ggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattccccttt 369  Q
    |||||| |||||||||||||| ||||||| || |||||||||||||||| |||| ||||||||| |||||||||||| |||||||    
T  11989121 ggactgttttgcaatttctctgcattcagagactaaagtgactacttctttccctttcagggacaaaagtgactaataccccttt 11989037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 120 - 256
Target Start/End: Complemental strand, 18445684 - 18445548
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| ||||| |||| |||||||||||| | |  |||||||||||| ||||||||||||||||||||||||||  || |||||| ||| |||||||||    
T  18445684 attagtcactttggtccctgaataggaaagaaattatcactttagtccatgaatgcagataaattgcaaaatagtttctgaatgtatactatgttagtca 18445585  T
Q  220 atttagtttctgaatgcagactctgttagtcaattta 256  Q
    | ||||| ||||||||||||||  |||| ||||||||    
T  18445584 acttagtatctgaatgcagacttcgttaatcaattta 18445548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 191 - 371
Target Start/End: Original strand, 33343108 - 33343293
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcag 284  Q
    |||||||| |||| | ||| ||||||||||||||||  ||||||| ||||| ||||| ||| |||||||||||||||||||||      | || |||||     
T  33343108 tagtccctgaatgcaaactatgttagtcaatttagtccctgaatgtagactttgttaatca-tttagttcctgaaattgaccaacagagtttatattcaa 33343206  T
Q  285 ggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccctttaa 371  Q
    |||||| |||||||||||||| |||||||  | |||| || |||||  | ||||||||||||| |||||||||||||||||||||||    
T  33343207 ggactgttttgcaatttctctgcattcagtaactaaaatgtctactcatttcccattcagggattaaagtgactaattcccctttaa 33343293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 117 - 273
Target Start/End: Complemental strand, 7300300 - 7300145
Alignment:
Q  117 gagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttag 216  Q
    ||||||||| |||||||||  ||||||||||||||||||| | ||||||||  || |||| ||||||| ||||||||| |  || |||||| ||||||||    
T  7300300 gagattagttactttagtctctgaataggaaaggagtcgttattttagtcctcga-tgcacataaattacaaaatagtacgaaattgtagattctgttag 7300202  T
Q  217 tcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca 273  Q
    |||||||| |  || |||||||||||||||||||| |||||| | |||| |||||||    
T  7300201 tcaatttaatccctaaatgcagactctgttagtcactttagtccttgaatttgacca 7300145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 115 - 219
Target Start/End: Original strand, 39541669 - 39541773
Alignment:
Q  115 gggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtt 214  Q
    |||||||||||  ||||||||  ||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||| ||| |||| | ||||    
T  39541669 gggagattagtcgctttagtcactgaataggaaatgagtcgtcactttagtctctgaatgcagataaattgcaaagtagtccctgaatatagattatgtt 39541768  T
Q  215 agtca 219  Q
    |||||    
T  39541769 agtca 39541773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 151 - 258
Target Start/End: Complemental strand, 11989293 - 11989186
Alignment:
Q  151 agtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtc 250  Q
    |||||||| ||||||| ||| ||| |||||||||||||||||||| |||  |||||||||||||||||||| ||||  |||||||||||||| |||| ||    
T  11989293 agtcgtcattttagtctctgcatgtagataaattgcaaaatagtctctagttgtagactctgttagtcaatctagtccctgaatgcagactccgttaatc 11989194  T
Q  251 aatttagt 258  Q
    ||||||||    
T  11989193 aatttagt 11989186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 120 - 223
Target Start/End: Complemental strand, 15031499 - 15031396
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| |||||||||| ||||| ||||| |||| |||||||||||| ||||||||||| ||||||||||| ||||||||||| |||||| |||| ||||    
T  15031499 attagtcactttagtccctgaatgggaaatgagtagtcactttagtctctgaatgcagagaaattgcaaaacagtccctaaatctagactttgttggtca 15031400  T
Q  220 attt 223  Q
    ||||    
T  15031399 attt 15031396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 120 - 223
Target Start/End: Original strand, 26498548 - 26498651
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| |||||||||| ||||| ||||| |||| |||||||||||||||||||||||| ||||||||||| ||||||| |||||||||  |||| ||||    
T  26498548 attagtcactttagtccctgaatgggaaaagagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagaccatgttggtca 26498647  T
Q  220 attt 223  Q
    ||||    
T  26498648 attt 26498651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 115 - 265
Target Start/End: Complemental strand, 43562884 - 43562734
Alignment:
Q  115 gggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtt 214  Q
    ||||||||||| | |||||||| | ||||||||| || |||||| ||||||  |||||||||||||||||| |||||||||| | |||||||| ||||||    
T  43562884 gggagattagtcattttagtccctcaataggaaatgattcgtcattttagtttctgaatgcagataaattgtaaaatagtccttgaatgtagattctgtt 43562785  T
Q  215 agtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
     ||||||||| |   ||||||||||||   |||||||||||| | ||||||    
T  43562784 tgtcaatttaatcgttgaatgcagacttcattagtcaatttaatccctgaa 43562734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 120 - 223
Target Start/End: Complemental strand, 38498382 - 38498279
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| |||||| ||| |||||  ||||||||| |||||||||||||||||||||| | |||||||||||||||| || |||||||||| ||||||| |    
T  38498382 attagtcactttaatccctgaatgagaaaggagtagtcactttagtccctgaatgcatagaaattgcaaaatagtctctgaatgtagactttgttagtta 38498283  T
Q  220 attt 223  Q
    ||||    
T  38498282 attt 38498279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 20759197 - 20759103
Alignment:
Q  129 tttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaattt 223  Q
    |||||||| |||||  ||||||||| |||| |||||||| |||||||||| ||||||||||||||||| | |||||||||| |||||||||||||    
T  20759197 tttagtccctgaatgagaaaggagtagtcattttagtccttgaatgcagagaaattgcaaaatagtccttgaatgtagactttgttagtcaattt 20759103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 120 - 223
Target Start/End: Original strand, 11989045 - 11989148
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| ||||| |||| ||||  |||||| ||| |||||||||||| ||||||||||| ||||||||||| ||||||| ||| ||||||||||| ||||    
T  11989045 attagtcacttttgtccctgaaagggaaagaagtagtcactttagtctctgaatgcagagaaattgcaaaacagtccctgaatatagactctgttggtca 11989144  T
Q  220 attt 223  Q
    ||||    
T  11989145 attt 11989148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 191 - 366
Target Start/End: Original strand, 21514847 - 21515028
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcag 284  Q
    |||||||| ||||  ||||  |||||||||||||||   ||||||  |||||||||||| | |||| | | ||||||||||||      | |||||||||    
T  21514847 tagtccctgaatgcggacttcgttagtcaatttagtccttgaatgtggactctgttagttactttaatccatgaaattgaccaatatagtctacattcag 21514946  T
Q  285 ggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccc 366  Q
    |||||| |||| ||||| |||||||||| ||| |||| ||||||||  | ||| |||||||||| |||||||||||||||||    
T  21514947 ggactgttttgaaatttatctacattcaaggactaaaatgactactcatttccaattcagggacaaaagtgactaattcccc 21515028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 116 - 258
Target Start/End: Original strand, 26920152 - 26920293
Alignment:
Q  116 ggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtta 215  Q
    |||||||| | |||||||||||| ||||| ||| ||||  | |||||||||| |||||  | |||||||||||||||||| |||||| |||||||| |||    
T  26920152 ggagattaatcactttagtcctt-aatagcaaatgagttataactttagtccatgaatctaaataaattgcaaaatagtctctaaatatagactctatta 26920250  T
Q  216 gtcaatttagtttctgaatgcagactctgttagtcaatttagt 258  Q
    || ||||||||| || |||| | |||  |||||||||||||||    
T  26920251 gttaatttagttcctcaatgtatacttcgttagtcaatttagt 26920293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 138 - 223
Target Start/End: Complemental strand, 39541871 - 39541786
Alignment:
Q  138 tgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaattt 223  Q
    ||||||| |||| ||| |||||||||||||||||||||||| |||||| |||| |||| || ||||||||||||||| ||||||||    
T  39541871 tgaatagaaaagaagtagtcactttagtccctgaatgcagagaaattgtaaaacagtctctgaatgtagactctgttggtcaattt 39541786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 48755572 - 48755504
Alignment:
Q  155 gtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaattt 223  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||| ||||||||||||||| ||||||||    
T  48755572 gtcactttagtccctgaatgcagagaaattgcaaaacagttcctgaatgtagactctgttggtcaattt 48755504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 114 - 196
Target Start/End: Original strand, 33412198 - 33412280
Alignment:
Q  114 tgggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtcc 196  Q
    |||||||||||| ||||||||| |||||||||||| || ||||||||||| ||   |||||||||||||||| ||||||||||    
T  33412198 tgggagattagtcactttagtctttgaataggaaatgaatcgtcactttaatcttcgaatgcagataaattgtaaaatagtcc 33412280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 191 - 328
Target Start/End: Original strand, 48755430 - 48755574
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactc-tgttagtcaatttagttcctgaaattgacca------tatacattca 283  Q
    |||||||| |||| |||||| |||||||||||||||   |||||| |||||| ||||||||| |||    ||||||||||||||      | ||||||||    
T  48755430 tagtccctgaatgcagactccgttagtcaatttagtccatgaatgtagactcgtgttagtcactttgacccctgaaattgaccaacagagtctacattca 48755529  T
Q  284 gggactgatttgcaatttctctacattcagggattaaagtgacta 328  Q
    || |||| |||||||||||||| |||||||||| |||||||||||    
T  48755530 ggaactgttttgcaatttctctgcattcagggactaaagtgacta 48755574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 119 - 223
Target Start/End: Original strand, 41984904 - 41985008
Alignment:
Q  119 gattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtc 218  Q
    ||||||| |||||||| | |||||| |||| |||| ||||||| ||| | |||||||||| ||||||||||| ||| | | || ||||||||||||||||    
T  41984904 gattagtcactttagttcctgaataagaaaagagtagtcacttaagtacttgaatgcagagaaattgcaaaacagtgcttgaacgtagactctgttagtc 41985003  T
Q  219 aattt 223  Q
    |||||    
T  41985004 aattt 41985008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 44968098 - 44968031
Alignment:
Q  155 gtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaattt 223  Q
    ||||||||||||| |||||| ||||||||||||||| |||||||||||||||||| |||| ||||||||    
T  44968098 gtcactttagtcc-tgaatgtagataaattgcaaaacagtccctaaatgtagactttgttggtcaattt 44968031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 258
Target Start/End: Original strand, 15005025 - 15005096
Alignment:
Q  187 aaaatagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagt 258  Q
    |||||||||| | ||||||||||||||||||||||||| |  |||||||||||||| |||||| ||||||||    
T  15005025 aaaatagtccttgaatgtagactctgttagtcaatttaatccctgaatgcagactcagttagttaatttagt 15005096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 223
Target Start/End: Complemental strand, 15005237 - 15005134
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| |||||| ||||||||| || || || | |||||||||||| ||||||||||| ||||||||||| |||  || ||||||||||||||  ||||    
T  15005237 attagtcactttaatccttgaatgggtaatgactggtcactttagtctctgaatgcagagaaattgcaaaacagtttctgaatgtagactctgtcggtca 15005138  T
Q  220 attt 223  Q
    ||||    
T  15005137 attt 15005134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 213 - 328
Target Start/End: Original strand, 44967980 - 44968100
Alignment:
Q  213 ttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcagggactgatttgcaatttctcta 306  Q
    |||||||||||||| | |||||| ||||||| ||||||| |||| | ||||||||||||||      | |||||| |||||||| |||||||||| ||||    
T  44967980 ttagtcaatttagtctttgaatgtagactctcttagtcactttaatccctgaaattgaccaacaaagtctacatttagggactgttttgcaatttatcta 44968079  T
Q  307 cattcagggattaaagtgacta 328  Q
    |||||| ||| |||||||||||    
T  44968080 cattca-ggactaaagtgacta 44968100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 258
Target Start/End: Complemental strand, 14434854 - 14434781
Alignment:
Q  185 gcaaaatagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagt 258  Q
    |||||||||||| | |||||||||||||||||||||||||||  ||||||||| |||| | |||| ||||||||    
T  14434854 gcaaaatagtccatgaatgtagactctgttagtcaatttagtccctgaatgcaaactcagatagttaatttagt 14434781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 48755412 - 48755327
Alignment:
Q  276 tacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaat 361  Q
    ||||||||||||||  ||||||| || ||| ||||||| || ||||||||| ||| || ||| |||||||||||||||||||||||    
T  48755412 tacattcagggactattttgcaacttatctgcattcagagactaaagtgacgactcctttcctattcagggactaaagtgactaat 48755327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 191 - 360
Target Start/End: Complemental strand, 14434816 - 14434641
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcag 284  Q
    |||||||| |||| | |||| | |||| |||||||| |||||||| |||||| | |||||| |||||| ||||||||| || |      | ||||||||     
T  14434816 tagtccctgaatgcaaactcagatagttaatttagtctctgaatgtagactccgctagtcactttagtccctgaaattaactaacaaagtctacattcaa 14434717  T
Q  285 ggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaa 360  Q
    |||||| |||||||| ||||| |||| | ||| ||||||||||| |  | ||||||||| ||| ||||||||||||    
T  14434716 ggactgttttgcaatatctctgcatttacggactaaagtgactattcatttcccattcatggattaaagtgactaa 14434641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 119 - 223
Target Start/End: Original strand, 18445404 - 18445508
Alignment:
Q  119 gattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtc 218  Q
    ||||||| |||||||| | |||||  |||| |||| ||||||| ||| | |||||||||| ||||||||||| ||| | | || ||||||||||||||||    
T  18445404 gattagtcactttagttcctgaatcagaaaagagtagtcacttaagtacttgaatgcagagaaattgcaaaacagtgcttgaacgtagactctgttagtc 18445503  T
Q  219 aattt 223  Q
    |||||    
T  18445504 aattt 18445508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 121 - 223
Target Start/End: Original strand, 14434641 - 14434743
Alignment:
Q  121 ttagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaa 220  Q
    ||||| |||||| ||| ||||| ||||| || | ||||||||||||| | |||||||| | ||||||||| ||||| | |||||||||| ||||||| ||    
T  14434641 ttagtcactttaatccatgaatgggaaatgaatagtcactttagtccgtaaatgcagagatattgcaaaacagtccttgaatgtagactttgttagttaa 14434740  T
Q  221 ttt 223  Q
    |||    
T  14434741 ttt 14434743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 1426669 - 1426726
Alignment:
Q  276 tacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttct 333  Q
    ||||||||| ||||| |||||||||||||| ||||||||||||||| |||||| ||||    
T  1426669 tacattcagtgactgttttgcaatttctctgcattcagggattaaaatgactaattct 1426726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 39541804 - 39541861
Alignment:
Q  276 tacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttct 333  Q
    ||||||||| ||||| ||| |||||||||| |||||||||| ||||||||||||||||    
T  39541804 tacattcagagactgttttacaatttctctgcattcagggactaaagtgactacttct 39541861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 1426719 - 1426651
Alignment:
Q  155 gtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaattt 223  Q
    |||| |||| |||||||||||||| ||||||||||| |||| || |||||||||| |||| ||||||||    
T  1426719 gtcattttaatccctgaatgcagagaaattgcaaaacagtcactgaatgtagactttgttggtcaattt 1426651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 191 - 258
Target Start/End: Original strand, 15031291 - 15031358
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagt 258  Q
    |||||||| |||| | |||| |||||||||||||||  ||||||| |||||| |||||||||||||||    
T  15031291 tagtccctgaatgcaaactccgttagtcaatttagtcactgaatgtagactccgttagtcaatttagt 15031358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 120 - 223
Target Start/End: Complemental strand, 33343283 - 33343180
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| |||||| ||| ||||| ||||| |||| | || ||||||  ||||||||||| ||||||||||| ||||| | ||| || |||||||| ||||    
T  33343283 attagtcactttaatccctgaatgggaaatgagtagacattttagttactgaatgcagagaaattgcaaaacagtccttgaatataaactctgttggtca 33343184  T
Q  220 attt 223  Q
    ||||    
T  33343183 attt 33343180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 365
Target Start/End: Original strand, 15005064 - 15005241
Alignment:
Q  194 tccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcaggga 287  Q
    ||||| |||| |||||| |||||| ||||||||   |||||| | ||| ||||||||| || | | |||||||||||||       | |||||||||  |    
T  15005064 tccctgaatgcagactcagttagttaatttagtccttgaatgtatactttgttagtcacttaaatccctgaaattgaccgacagagtctacattcagaaa 15005163  T
Q  288 ctgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattccc 365  Q
    ||| |||||||||||||| ||||||| || ||||||||| | |  |  |||||||| ||| |||||||||||||||||    
T  15005164 ctgttttgcaatttctctgcattcagagactaaagtgaccagtcattacccattcaaggattaaagtgactaattccc 15005241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 15031273 - 15031188
Alignment:
Q  276 tacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaat 361  Q
    ||||||||||||||  ||| |||||| ||| |||||| ||| ||||||||| |||  | ||||||||| ||||||||||| |||||    
T  15031273 tacattcagggactattttacaatttatctgcattcaaggactaaagtgacgactcttttcccattcaaggactaaagtggctaat 15031188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 26498710 - 26498795
Alignment:
Q  276 tacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaat 361  Q
    |||||||| |||||  |||||||||| ||| |||||||||| ||||||||  |||  | ||| |||||| ||||||||||||||||    
T  26498710 tacattcatggactattttgcaatttatctgcattcagggactaaagtgatgactcatttcctattcagagactaaagtgactaat 26498795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 33343091 - 33343006
Alignment:
Q  276 tacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaat 361  Q
    |||||||||||||   || ||||||| ||| |||||||||| ||||||||| |||  | | | |||||||||||||||||||||||    
T  33343091 tacattcagggaccatttagcaatttatctgcattcagggactaaagtgacgactcattttctattcagggactaaagtgactaat 33343006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 277 - 367
Target Start/End: Complemental strand, 43562695 - 43562603
Alignment:
Q  277 acattcagggactgatttgcaatttctctacattcagggattaaagtgac--tacttctatcccattcagggactaaagtgactaattcccct 367  Q
    ||||||| |||||| |||||||||||||| ||||||  ||  ||| ||||  ||||  | |||||||||| ||||||||||||||||||||||    
T  43562695 acattcaaggactgttttgcaatttctctgcattcaatgaccaaattgacattactcttttcccattcagagactaaagtgactaattcccct 43562603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 274 - 362
Target Start/End: Original strand, 18445597 - 18445685
Alignment:
Q  274 tatacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaatt 362  Q
    |||||||||||  |||  |||||||||| ||| |||||| ||| ||||||||  | |||| ||| |||||||||| |||||||||||||    
T  18445597 tatacattcagaaactattttgcaatttatctgcattcatggactaaagtgataatttctttcctattcagggaccaaagtgactaatt 18445685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 115 - 223
Target Start/End: Complemental strand, 26920439 - 26920331
Alignment:
Q  115 gggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtt 214  Q
    |||| ||||||||||||| | | ||||||| |||| ||| || |||||||||  |||||||||| ||||||||||| ||| | | |||||| ||| ||||    
T  26920439 gggaaattagtgactttaattcctgaatagaaaagtagtagttactttagtctatgaatgcagaaaaattgcaaaacagttcttgaatgtatactttgtt 26920340  T
Q  215 agtcaattt 223  Q
      |||||||    
T  26920339 gatcaattt 26920331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 279 - 361
Target Start/End: Complemental strand, 39541756 - 39541674
Alignment:
Q  279 attcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaat 361  Q
    |||||||||||  |||||||||| ||| ||||||| || ||||||||| |||  | ||| |||||| |||||||| |||||||    
T  39541756 attcagggactactttgcaatttatctgcattcagagactaaagtgacgactcatttcctattcagtgactaaagcgactaat 39541674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 1426569 - 1426484
Alignment:
Q  276 tacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaat 361  Q
    |||||||||| |||  |||||||||| ||| ||||||||   ||||||||| |||  | ||| |||||| ||||||||||||||||    
T  1426569 tacattcaggaactattttgcaatttatctgcattcaggatctaaagtgacgactcatttcctattcagagactaaagtgactaat 1426484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 258
Target Start/End: Original strand, 26840038 - 26840126
Alignment:
Q  167 cctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagt 258  Q
    |||||||| ||||||||| ||||||||||  | |||||||||||   ||||||||||||| | | | || |||||| |||||| ||||||||    
T  26840038 cctgaatgtagataaattacaaaatagtctttgaatgtagactc---tagtcaatttagtctttaattgaagactccgttagttaatttagt 26840126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 1426587 - 1426647
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtca 251  Q
    |||||||| |||| |||||| |||||||||||||||  || |||| |||||| ||||||||    
T  1426587 tagtccctgaatgcagactccgttagtcaatttagtccctaaatgtagactccgttagtca 1426647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 229 - 265
Target Start/End: Original strand, 15031265 - 15031301
Alignment:
Q  229 ctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  15031265 ctgaatgtagactctgttagtcaatttagtccctgaa 15031301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 178 - 214
Target Start/End: Complemental strand, 39229183 - 39229147
Alignment:
Q  178 ataaattgcaaaatagtccctaaatgtagactctgtt 214  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  39229183 ataaattgcaaaatagtccttaaatgtagactttgtt 39229147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 229 - 265
Target Start/End: Original strand, 48755404 - 48755440
Alignment:
Q  229 ctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  48755404 ctgaatgtagactctgttagtcaatttagtccctgaa 48755440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 366
Target Start/End: Original strand, 48755553 - 48755581
Alignment:
Q  338 cattcagggactaaagtgactaattcccc 366  Q
    |||||||||||||||||||||||||||||    
T  48755553 cattcagggactaaagtgactaattcccc 48755581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 136; Significance: 1e-70; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 115 - 367
Target Start/End: Complemental strand, 22018134 - 22017876
Alignment:
Q  115 gggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtt 214  Q
    ||||||||||| |||||||||| | ||||||||| ||||||||| ||| ||| ||||||||||||||||||||||||||||||| |||||||||| ||||    
T  22018134 gggagattagtcactttagtccctaaataggaaatgagtcgtcattttcgtctctgaatgcagataaattgcaaaatagtccctgaatgtagactatgtt 22018035  T
Q  215 agtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacc------atatacattcagggactgatttgcaatttctctaca 308  Q
    |||| ||||||| |||||||| | |||| |||| ||| |||||| | |||||||||||      |||||||||||||||||| |||||||||||||| ||    
T  22018034 agtctatttagtctctgaatgtatactccgttaatcactttagtccttgaaattgaccaacagaatatacattcagggactgttttgcaatttctctgca 22017935  T
Q  309 ttcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccct 367  Q
    |||||||| ||||||||||||| || ||||||||||||| |||||||||| ||||||||    
T  22017934 ttcagggactaaagtgactactcctttcccattcagggattaaagtgactgattcccct 22017876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 115 - 265
Target Start/End: Complemental strand, 2634308 - 2634158
Alignment:
Q  115 gggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtt 214  Q
    ||||||||||| |||||||||||| |||| |||| ||||| ||||||||||| ||||||| ||||||||||| |||||||| || |||||||||||||||    
T  2634308 gggagattagtcactttagtccttaaataagaaatgagtcttcactttagtcactgaatgtagataaattgctaaatagtctctgaatgtagactctgtt 2634209  T
Q  215 agtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    ||||||||||||  |||||||||||||||||| ||||||||||| ||||||    
T  2634208 agtcaatttagtccctgaatgcagactctgttcgtcaatttagtccctgaa 2634158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 117 - 263
Target Start/End: Complemental strand, 55382838 - 55382692
Alignment:
Q  117 gagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttag 216  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||| ||||||    
T  55382838 gagattagtcactttagtccttgaataggaaatgagtcgtcactttaatccctgaatgcagataaattgcaaaatagtctctgaatgtagactttgttag 55382739  T
Q  217 tcaatttagtttctgaatgcagactctgttagtcaatttagttcctg 263  Q
    ||||||| ||  || |||||||| || ||||||||||||||| ||||    
T  55382738 tcaattttgtccctaaatgcagattccgttagtcaatttagtccctg 55382692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 115 - 258
Target Start/End: Complemental strand, 10380879 - 10380736
Alignment:
Q  115 gggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtt 214  Q
    ||||||||||| |||||||||||||||||| |||  |||||| ||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  10380879 gggagattagtcactttagtccttgaatagaaaataagtcgtaactttagcccctgaattcagataaattgcaaaatagtctctaaatgtagactctgtt 10380780  T
Q  215 agtcaatttagtttctgaatgcagactctgttagtcaatttagt 258  Q
    |||||||||| |  |||||||||||||  |||||||||||||||    
T  10380779 agtcaatttaatccctgaatgcagacttcgttagtcaatttagt 10380736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 119 - 265
Target Start/End: Original strand, 5448195 - 5448341
Alignment:
Q  119 gattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtc 218  Q
    |||||||  ||||| ||| ||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||| |||| |||||| ||||||||||||    
T  5448195 gattagtccctttattccctgaataggaaaggagtcatcattttagtccctgaatgcagataaattgtaaaatagcccctgaatgtaaactctgttagtc 5448294  T
Q  219 aatttagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    ||||||||  ||| |||||||||| ||| ||||||||||| ||||||    
T  5448295 aatttagtccctggatgcagactccgttggtcaatttagtccctgaa 5448341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 116 - 258
Target Start/End: Complemental strand, 30471101 - 30470959
Alignment:
Q  116 ggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtta 215  Q
    |||||||||| |||||||||  ||||||| ||| |||||||||||||||| |||||||| |||||||||| |||||||||||| |||||||||| |||||    
T  30471101 ggagattagtcactttagtctctgaatagaaaaagagtcgtcactttagttcctgaatgtagataaattgtaaaatagtccctgaatgtagactatgtta 30471002  T
Q  216 gtcaatttagtttctgaatgcagactctgttagtcaatttagt 258  Q
     ||||||||||  |||||||||||||| |||| ||||||||||    
T  30471001 atcaatttagtccctgaatgcagactccgttaatcaatttagt 30470959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 142 - 265
Target Start/End: Complemental strand, 18830831 - 18830708
Alignment:
Q  142 taggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagact 241  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||| |||||||  |||||||||||||    
T  18830831 taggaaagaaatcgtcactttagtccctgaatgcagataaattgcaaaatagtccttgaatgtagattctgttagtccatttagtccctgaatgcagact 18830732  T
Q  242 ctgttagtcaatttagttcctgaa 265  Q
      ||||||||||||||| ||||||    
T  18830731 tcgttagtcaatttagtccctgaa 18830708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 114 - 265
Target Start/End: Original strand, 30378737 - 30378887
Alignment:
Q  114 tgggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgt 213  Q
    |||||||||| | ||||| ||||| || ||||||| ||||| ||||||||||||||| ||| | |||||||||||||||||| || |||| |||||||||    
T  30378737 tgggagattaatcactttggtcct-gattaggaaaagagtcatcactttagtccctggatgtaaataaattgcaaaatagtctctgaatgcagactctgt 30378835  T
Q  214 tagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    ||||||||| ||| ||||||||||||||||||||||||||| ||| ||||||    
T  30378836 tagtcaattcagtctctgaatgcagactctgttagtcaattcagtccctgaa 30378887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 118 - 256
Target Start/End: Complemental strand, 37695213 - 37695075
Alignment:
Q  118 agattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagt 217  Q
    ||||| || |||||||| | |||| |||||| ||||| |||||||||||| |||||||||||||||||||||||| || || ||||||||||||||||||    
T  37695213 agattggtcactttagttcatgaaaaggaaatgagtcatcactttagtccttgaatgcagataaattgcaaaataatctctgaatgtagactctgttagt 37695114  T
Q  218 caatttagtttctgaatgcagactctgttagtcaattta 256  Q
    ||||||| |   |||||||||||||||||||||||||||    
T  37695113 caatttaatcgttgaatgcagactctgttagtcaattta 37695075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 115 - 265
Target Start/End: Complemental strand, 47943732 - 47943582
Alignment:
Q  115 gggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtt 214  Q
    |||||||||||   |||||||| ||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||  |||    
T  47943732 gggagattagtcgttttagtccctgaataggaaatgagtcgtcactttagtccttaaatgcagataaattgcaaaatagtccctgaatgtagacttggtt 47943633  T
Q  215 agtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    |||||||||||||  |||||||||   | ||||||||||||| | ||||||    
T  47943632 agtcaatttagttcttgaatgcaggaaccgttagtcaatttaatccctgaa 47943582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 116 - 323
Target Start/End: Complemental strand, 8951271 - 8951058
Alignment:
Q  116 ggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtta 215  Q
    |||||||||| | |||||||| | |||||||||||| ||||||| ||||| |||||||  |||||||| | |||||||| ||| |||||||| | |||||    
T  8951271 ggagattagttaatttagtccatcaataggaaaggaatcgtcacattagttcctgaatatagataaatggtaaaatagttcctgaatgtagattttgtta 8951172  T
Q  216 gtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcagggactgatttgcaatttctctacat 309  Q
    |||||||||||| || |||| |||||  |||||||| ||||||| || ||||||||||      | ||||||||  ||||| |||||||||||| |||||    
T  8951171 gtcaatttagttccttaatgtagacttcgttagtcattttagtttcttaaattgaccaactgagtctacattcaaagactgttttgcaatttctttacat 8951072  T
Q  310 tcagggattaaagt 323  Q
    ||||||| ||||||    
T  8951071 tcagggactaaagt 8951058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 191 - 369
Target Start/End: Complemental strand, 10757746 - 10757562
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcag 284  Q
    |||||||| |||| |||||| |||||||||||||||  ||||||| ||||||||||| ||| | || | ||||| ||||||||      | ||||| ||     
T  10757746 tagtccctgaatgcagactccgttagtcaatttagtccctgaatgtagactctgttaatcactataatccctgagattgaccaacatagtctacatccat 10757647  T
Q  285 ggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattccccttt 369  Q
    |||||| |||||||||| |||||||||||||| |||||||||||||  | || ||||||||||||||||||||||||||||||||    
T  10757646 ggactgttttgcaatttatctacattcagggactaaagtgactactcatttctcattcagggactaaagtgactaattccccttt 10757562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 191 - 369
Target Start/End: Complemental strand, 10970917 - 10970733
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcag 284  Q
    |||||||| |||| |||||| |||||||||||||||  ||||||| ||||||||||| ||| | || | ||||| ||||||||      | ||||| ||     
T  10970917 tagtccctgaatgcagactccgttagtcaatttagtccctgaatgtagactctgttaatcactataatccctgagattgaccaacatagtctacatccat 10970818  T
Q  285 ggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattccccttt 369  Q
    |||||| |||||||||| |||||||||||||| |||||||||||||  | || ||||||||||||||||||||||||||||||||    
T  10970817 ggactgttttgcaatttatctacattcagggactaaagtgactactcatttctcattcagggactaaagtgactaattccccttt 10970733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 114 - 258
Target Start/End: Original strand, 3369959 - 3370103
Alignment:
Q  114 tgggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgt 213  Q
    ||||| |||||| | |||||| | |||  ||||||| ||| |||| |||||| ||||||| |||||||||||||||||||||  ||||||||||||||||    
T  3369959 tgggaaattagtcattttagttcctgagcaggaaagaagttgtcattttagttcctgaatccagataaattgcaaaatagtcattaaatgtagactctgt 3370058  T
Q  214 tagtcaatttagtttctgaatgcagactctgttagtcaatttagt 258  Q
    |||||||||||||  |||||||||||||  |||||||||||||||    
T  3370059 tagtcaatttagtccctgaatgcagacttcgttagtcaatttagt 3370103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 118 - 270
Target Start/End: Original strand, 29908887 - 29909039
Alignment:
Q  118 agattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagt 217  Q
    |||||||| |||||  ||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||| | | |||| |||||| ||||||    
T  29908887 agattagtcactttgatccttgaataggaaatgagtcgtcactttagtcactggatgcagataaattgcaaaatagttcatgaatgcagactccgttagt 29908986  T
Q  218 caatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattga 270  Q
    |||||||||   |||||| ||| ||  ||| ||| ||||||||||||||||||    
T  29908987 caatttagtcgttgaatgtagagtccattattcactttagttcctgaaattga 29909039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 116 - 258
Target Start/End: Complemental strand, 1387626 - 1387483
Alignment:
Q  116 ggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtta 215  Q
    |||||||||| |||||||||| |||||||||||| | || ||| ||||| |||||||||||||||||||| |||||| ||||| |||||||| | ||||     
T  1387626 ggagattagttactttagtccctgaataggaaagaaatcatcattttaggccctgaatgcagataaattgtaaaatattccctgaatgtagattttgttc 1387527  T
Q  216 gtcaatttagt-ttctgaatgcagactctgttagtcaatttagt 258  Q
     ||||||||||   ||||||||||||||||||||||||||||||    
T  1387526 atcaatttagtcccctgaatgcagactctgttagtcaatttagt 1387483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 194 - 368
Target Start/End: Complemental strand, 37695073 - 37694893
Alignment:
Q  194 tccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcaggga 287  Q
    |||||||||| |||| | |||||||||||||||  ||||||  ||||||| ||||||| ||||||  || ||||||||||      | ||||||||||||    
T  37695073 tccctaaatgcagaccccgttagtcaatttagtccctgaatatagactctattagtcactttagtcacttaaattgaccaacacaatctacattcaggga 37694974  T
Q  288 ctgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccctt 368  Q
    ||| |||||||||||||| |||||||||| ||||||||||||| |  || || |||| |||||||||||||||||||||||    
T  37694973 ctgttttgcaatttctctgcattcagggactaaagtgactactccattctcactcagtgactaaagtgactaattcccctt 37694893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 118 - 258
Target Start/End: Original strand, 2063144 - 2063284
Alignment:
Q  118 agattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagt 217  Q
    |||||||| |||||||||| |||| |||||| |||||| |||||| || | ||||||||||||||||  |||||||||  | |||||| ||| |||||||    
T  2063144 agattagtcactttagtccctgaagaggaaatgagtcggcactttggttcttgaatgcagataaattataaaatagtcattgaatgtaaactatgttagt 2063243  T
Q  218 caatttagtttctgaatgcagactctgttagtcaatttagt 258  Q
    ||||||||| |||||||||| |||| |||||||||||||||    
T  2063244 caatttagtctctgaatgcaaactccgttagtcaatttagt 2063284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 258
Target Start/End: Original strand, 11821743 - 11821861
Alignment:
Q  140 aataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaatttagtttctgaatgcaga 239  Q
    |||||||||| ||||||||||||||||| | ||| |||||||||||||||||||||  | |||||||||||||||||| ||||||||  |||||||||||    
T  11821743 aataggaaagaagtcgtcactttagtccttaaatacagataaattgcaaaatagtctttgaatgtagactctgttagttaatttagtccctgaatgcaga 11821842  T
Q  240 ctctgttagtcaatttagt 258  Q
     |  |||||||||||||||    
T  11821843 tttcgttagtcaatttagt 11821861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 120 - 265
Target Start/End: Original strand, 9826632 - 9826777
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| ||||| |||| |||||||||||| | |  |||||||||||| ||||||||||||||||||||||||||  || |||||| ||| |||||||||    
T  9826632 attagtcactttggtccctgaataggaaagaaattatcactttagtccatgaatgcagataaattgcaaaatagtttctgaatgtatactatgttagtca 9826731  T
Q  220 atttagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    | ||||| ||||||||||||||  |||| |||||||| | ||||||    
T  9826732 acttagtatctgaatgcagacttcgttaatcaatttaatccctgaa 9826777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 191 - 369
Target Start/End: Complemental strand, 30470994 - 30470810
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcag 284  Q
    |||||||| |||| |||||| |||| ||||||||||   |||||| ||||||||||||||| |||||| ||||||||||||||        |||||| ||    
T  30470994 tagtccctgaatgcagactccgttaatcaatttagtcattgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaatgctacatttag 30470895  T
Q  285 ggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattccccttt 369  Q
    ||| || |||||||||||||| |||||||| | |||||||||||||  | |||| |||||| ||||||| ||| |||||||||||    
T  30470894 ggagtgttttgcaatttctctgcattcaggaactaaagtgactactcatttcccgttcaggaactaaagagaccaattccccttt 30470810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 191 - 364
Target Start/End: Complemental strand, 2634200 - 2634021
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcag 284  Q
    |||||||| |||| |||||||||| |||||||||||  ||||||| ||||| ||||| ||| ||||||  |||||||||||||      | |||||||||    
T  2634200 tagtccctgaatgcagactctgttcgtcaatttagtccctgaatgtagactttgttaatcactttagtcgctgaaattgaccaataaagtctacattcag 2634101  T
Q  285 ggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcc 364  Q
    |||||| |||||||||||||  ||||| | |  |||||||||||||  | || |||||| ||||||||||||||||||||    
T  2634100 ggactgttttgcaatttctcagcattcggcggctaaagtgactactcttttctcattcatggactaaagtgactaattcc 2634021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 155 - 265
Target Start/End: Complemental strand, 18836523 - 18836413
Alignment:
Q  155 gtcactttagtccctgaatgcagataaattgcaaaa-tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaat 253  Q
    |||||||||||||||||||||||| ||||||||||| || ||||| || |||||||||||||||| |||||||  |||||||||||||| ||||||| ||    
T  18836523 gtcactttagtccctgaatgcagaaaaattgcaaaagtaatccctgaacgtagactctgttagtccatttagtccctgaatgcagactccgttagtc-at 18836425  T
Q  254 ttagttcctgaa 265  Q
    ||||| ||||||    
T  18836424 ttagtccctgaa 18836413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 191 - 362
Target Start/End: Complemental strand, 18830750 - 18830574
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcag 284  Q
    |||||||| |||| |||||  |||||||||||||||  ||||||| ||||||  ||||||| |||||| ||||||||||||||      | |||||||||    
T  18830750 tagtccctgaatgcagacttcgttagtcaatttagtccctgaatgtagactccattagtcactttagtccctgaaattgaccaacagaatctacattcag 18830651  T
Q  285 ggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaatt 362  Q
    |||||| || ||||||| ||| ||| |||| | |||||||||||||  | || |||||||||||||||||||||||||    
T  18830650 ggactgtttagcaatttatctgcatccagg-actaaagtgactactcatttctcattcagggactaaagtgactaatt 18830574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 276 - 365
Target Start/End: Original strand, 2063340 - 2063429
Alignment:
Q  276 tacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattccc 365  Q
    ||||||||||||||| |||||||||||||| || ||| |||||||||||||||||  | ||||||||| |||||||||||||||||||||    
T  2063340 tacattcagggactgctttgcaatttctctgcaatcaaggattaaagtgactactcatttcccattcaaggactaaagtgactaattccc 2063429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 200 - 366
Target Start/End: Complemental strand, 5324850 - 5324678
Alignment:
Q  200 aatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcagggactgatt 293  Q
    |||| ||||||||||||||||||||||   |||||| | |||||||| |||| |||||| ||||||||||||||      | ||||||||  ||||| ||    
T  5324850 aatgcagactctgttagtcaatttagtccttgaatgtaaactctgttcgtcactttagtccctgaaattgaccaacagagtctacattcaaagactgttt 5324751  T
Q  294 tgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccc 366  Q
    |||||||||||| ||| ||| |  ||||| ||||||| || || ||||||||||||||||||||||| |||||    
T  5324750 tgcaatttctctgcatccagaggctaaagcgactactcctttcacattcagggactaaagtgactaactcccc 5324678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 191 - 365
Target Start/End: Original strand, 5448299 - 5448479
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcag 284  Q
    ||||||||  ||| |||||| ||| |||||||||||  ||||||  |||||   ||||||| |||||||||||||||||||||      | |||||||||    
T  5448299 tagtccctggatgcagactccgttggtcaatttagtccctgaatatagacttcattagtcactttagttcctgaaattgaccaacagagtttacattcag 5448398  T
Q  285 ggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattccc 365  Q
    |||||| |||||||||||||| |||||||||| ||||||||||| |  | | | ||||| ||| |||||||||||||||||    
T  5448399 ggactgttttgcaatttctctgcattcagggactaaagtgactattctttttcgattcacggagtaaagtgactaattccc 5448479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 113 - 214
Target Start/End: Original strand, 47463807 - 47463908
Alignment:
Q  113 ttgggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctg 212  Q
    |||||| |||||| |||||||||| || || ||||| |||| |||||||||||||||||||||||||||||||||||| ||||  | |||||||||||||    
T  47463807 ttgggaaattagtcactttagtccctggatgggaaatgagtagtcactttagtccctgaatgcagataaattgcaaaacagtctttgaatgtagactctg 47463906  T
Q  213 tt 214  Q
    ||    
T  47463907 tt 47463908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 129 - 265
Target Start/End: Complemental strand, 2232640 - 2232505
Alignment:
Q  129 tttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaatttagttt 228  Q
    |||||||||  |||| ||||||| ||||||||||||||||| |||| | |||||||| |||||||||| | |||||||||| |||||||||||||| |      
T  2232640 tttagtcctccaataagaaaggaatcgtcactttagtccctaaatgtaaataaattgtaaaatagtccttcaatgtagactatgttagtcaatttaatcc 2232541  T
Q  229 ctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    |||  || |||||||||||| ||||||||| ||||||    
T  2232540 ctggttg-agactctgttagccaatttagtccctgaa 2232505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 127 - 223
Target Start/End: Original strand, 22017889 - 22017985
Alignment:
Q  127 actttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaattt 223  Q
    |||||| ||| ||||| |||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| |||||| | |||||| ||||||||    
T  22017889 actttaatccctgaatgggaaaggagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtatattctgttggtcaattt 22017985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 120 - 223
Target Start/End: Complemental strand, 2063425 - 2063322
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| |||||||||||||||| ||||| |||| ||||||||| ||| ||| |||||| ||||||||||  ||||||| ||||||||||||||| ||||    
T  2063425 attagtcactttagtccttgaatgggaaatgagtagtcactttaatccttgattgcagagaaattgcaaagcagtccctgaatgtagactctgttggtca 2063326  T
Q  220 attt 223  Q
    ||||    
T  2063325 attt 2063322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 141 - 258
Target Start/End: Complemental strand, 5324937 - 5324824
Alignment:
Q  141 ataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagac 240  Q
    |||| ||| ||||||||||||||||||  ||||    |||||||| ||||||||  || | || |||||||||||||||||||||||  |||||||||||    
T  5324937 atagaaaacgagtcgtcactttagtcctcgaat----ataaattgtaaaatagtttctgattgcagactctgttagtcaatttagttcatgaatgcagac 5324842  T
Q  241 tctgttagtcaatttagt 258  Q
    ||||||||||||||||||    
T  5324841 tctgttagtcaatttagt 5324824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 120 - 223
Target Start/End: Complemental strand, 5448475 - 5448372
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| |||||| ||| ||||| | ||| || | |||||||||||||||||||||||| ||||||||||| ||||||| |||||| |||||||| ||||    
T  5448475 attagtcactttactccgtgaatcgaaaaagaatagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtaaactctgttggtca 5448376  T
Q  220 attt 223  Q
    ||||    
T  5448375 attt 5448372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 200 - 372
Target Start/End: Complemental strand, 12140834 - 12140656
Alignment:
Q  200 aatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcagggactgatt 293  Q
    ||||||||||| |||||||||||||||   |||||| ||| | ||||||||| |||||| ||| |||||||  |      | || ||| |||||||| ||    
T  12140834 aatgtagactccgttagtcaatttagtccttgaatgtagaatttgttagtcattttagtccctaaaattgattaacaaagtctatatttagggactgttt 12140735  T
Q  294 tgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccctttaat 372  Q
    |||||||||| | |||||| ||||||||||||| |||| | || |||| | ||| ||||||||||||||||||||||||    
T  12140734 tgcaatttctttgcattcaaggattaaagtgacgacttatttctcatttaaggattaaagtgactaattcccctttaat 12140656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 200 - 361
Target Start/End: Original strand, 30378854 - 30379017
Alignment:
Q  200 aatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgaccata---tacattcagggactgatttgc 296  Q
    |||| |||||||||||||||||| |||  ||||||  |||||| |||||||| ||||||  ||||||||||||| |   | ||||||| ||||  |||||    
T  30378854 aatgcagactctgttagtcaattcagtccctgaatt-agactccgttagtcactttagtgtctgaaattgaccaaagtctgcattcagagacttctttgc 30378952  T
Q  297 aatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaat 361  Q
    ||||||||| |||| ||||| |||||||||||||  | ||| ||| || ||||||||||||||||    
T  30378953 aatttctctgcattaagggactaaagtgactactcatttcctatttagagactaaagtgactaat 30379017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 120 - 221
Target Start/End: Original strand, 10757570 - 10757671
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| |||||||||| |||||  |||| |||| |||||||||||||||||||| ||||||||||||||| ||||| |  ||||||||| |||| ||||    
T  10757570 attagtcactttagtccctgaatgagaaatgagtagtcactttagtccctgaatgtagataaattgcaaaacagtccatggatgtagactatgttggtca 10757669  T
Q  220 at 221  Q
    ||    
T  10757670 at 10757671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 120 - 221
Target Start/End: Original strand, 10970741 - 10970842
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| |||||||||| |||||  |||| |||| |||||||||||||||||||| ||||||||||||||| ||||| |  ||||||||| |||| ||||    
T  10970741 attagtcactttagtccctgaatgagaaatgagtagtcactttagtccctgaatgtagataaattgcaaaacagtccatggatgtagactatgttggtca 10970840  T
Q  220 at 221  Q
    ||    
T  10970841 at 10970842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 120 - 224
Target Start/End: Original strand, 37694900 - 37695004
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| |||||||||  ||| |  ||| ||||| |||||||||||||||||||||||| ||||||||||| ||||||| |||||||| | |||| ||||    
T  37694900 attagtcactttagtcactgagtgagaatggagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagattgtgttggtca 37694999  T
Q  220 attta 224  Q
    |||||    
T  37695000 attta 37695004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 120 - 223
Target Start/End: Original strand, 18830575 - 18830677
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| |||||||||| |||||  |||| |||| ||||||||||||| || ||||||||||||||| ||| ||||||| |||||||| |||||| ||||    
T  18830575 attagtcactttagtccctgaatgagaaatgagtagtcactttagtcc-tggatgcagataaattgctaaacagtccctgaatgtagattctgttggtca 18830673  T
Q  220 attt 223  Q
    ||||    
T  18830674 attt 18830677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 276 - 362
Target Start/End: Complemental strand, 47463899 - 47463813
Alignment:
Q  276 tacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaatt 362  Q
    ||||||||  ||||| |||||||||| ||| |||||||||| |||||||||||||  | |||||| |||||||||||||||||||||    
T  47463899 tacattcaaagactgttttgcaatttatctgcattcagggactaaagtgactactcatttcccatccagggactaaagtgactaatt 47463813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 191 - 362
Target Start/End: Original strand, 11821826 - 11822007
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcag 284  Q
    |||||||| |||| ||| |  ||||||||||||||| | |||||| ||||||||||||||| |||||| ||||||||||||||      | || ||||||    
T  11821826 tagtccctgaatgcagatttcgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaagtctaaattcag 11821925  T
Q  285 ggactga----tttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaatt 362  Q
     || |||    |||||||||||||| |||||||||| |||||| | ||||  | ||||||| | |||||||||| |||||||    
T  11821926 agattgattgttttgcaatttctctgcattcagggactaaagtaagtactcatttcccattgaaggactaaagtaactaatt 11822007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 205 - 366
Target Start/End: Complemental strand, 2232533 - 2232367
Alignment:
Q  205 agactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcagggactgatttgcaa 298  Q
    |||||||||||| |||||||||  ||||||| ||||| | ||| ||| |||||| ||||||||||||||      | |||||| ||||| || |||||||    
T  2232533 agactctgttagccaatttagtccctgaatgtagacttt-ttaatcactttagtccctgaaattgaccaacagaatctacattgagggattgttttgcaa 2232435  T
Q  299 tttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccc 366  Q
    |||||||  ||||||||| |||| ||||||||  | |  |||| ||| ||||||||||||||||||||    
T  2232434 tttctctctattcagggactaaattgactactcatttttcatttaggaactaaagtgactaattcccc 2232367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 223
Target Start/End: Original strand, 12140667 - 12140770
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| |||||| ||||| |||  ||||  ||||||||||||| ||| |||||||| | ||||||||||| ||||||||||| |||||| ||||| |||    
T  12140667 attagtcactttaatccttaaatgagaaataagtcgtcactttaatccttgaatgcaaagaaattgcaaaacagtccctaaatatagactttgttaatca 12140766  T
Q  220 attt 223  Q
    ||||    
T  12140767 attt 12140770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 194 - 273
Target Start/End: Original strand, 18500704 - 18500783
Alignment:
Q  194 tccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca 273  Q
    ||||| |||||||||||||||||||||||||||  ||||||  ||||||||||| ||| ||||||  |||||||||||||    
T  18500704 tccctgaatgtagactctgttagtcaatttagtccctgaatttagactctgttaatcactttagtctctgaaattgacca 18500783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 223
Target Start/End: Original strand, 18836280 - 18836382
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| | ||| |||| |||||  |||| |||| |||||||||||||||||||||||||||||| ||||| |||||||||||||  || ||||| ||||    
T  18836280 attagtcatttttgtccctgaatgagaaatgagtagtcactttagtccctgaatgcagataaatt-caaaacagtccctaaatgttaacgctgttggtca 18836378  T
Q  220 attt 223  Q
    ||||    
T  18836379 attt 18836382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 113 - 172
Target Start/End: Complemental strand, 47463975 - 47463916
Alignment:
Q  113 ttgggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaa 172  Q
    ||||||||||||| |||||||| | ||||||||||| |||||||||||||||||||||||    
T  47463975 ttgggagattagtcactttagttcctgaataggaaatgagtcgtcactttagtccctgaa 47463916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 1387514 - 1387444
Alignment:
Q  195 ccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    |||| |||| ||||||||||||||||||||||  ||||||| ||||| ||||||||| |||||||||||||    
T  1387514 ccctgaatgcagactctgttagtcaatttagtcgctgaatgtagactttgttagtcactttagttcctgaa 1387444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 121 - 223
Target Start/End: Original strand, 5324684 - 5324786
Alignment:
Q  121 ttagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaa 220  Q
    ||||| |||||||||| |||||  ||||||||| ||| |||||| | ||| ||||||| ||||||||||| ||||  | ||||||||||||||| |||||    
T  5324684 ttagtcactttagtccctgaatgtgaaaggagtagtcgctttagcctctggatgcagagaaattgcaaaacagtctttgaatgtagactctgttggtcaa 5324783  T
Q  221 ttt 223  Q
    |||    
T  5324784 ttt 5324786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 271
Target Start/End: Original strand, 47144712 - 47144872
Alignment:
Q  114 tgggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcaga-taaattg--caaaatagtccctaaatgtagactc 210  Q
    ||||| |||||| ||||||||||| ||||||  || |||||||||||||||| |||||||| ||| | | ||   |||  |||||| | |||  ||||||    
T  47144712 tgggaaattagtcactttagtcctcgaatagttaatgagtcgtcactttagttcctgaatgtagactcagttagtcaatttagtccttgaataaagactc 47144811  T
Q  211 tgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgac 271  Q
     |||| ||||||||||| |||||||||||||| ||| |||| |||||| | ||||||||||    
T  47144812 cgttaatcaatttagttcctgaatgcagactccgttggtcactttagtccttgaaattgac 47144872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 55382750 - 55382835
Alignment:
Q  276 tacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaat 361  Q
    ||||||||| ||||  |||||||||| ||| |||||||||||||||||||| |||  | ||| ||||| |||||||||||||||||    
T  55382750 tacattcagagactattttgcaatttatctgcattcagggattaaagtgacgactcatttcctattcaaggactaaagtgactaat 55382835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 119 - 223
Target Start/End: Complemental strand, 9826912 - 9826808
Alignment:
Q  119 gattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtc 218  Q
    ||||||| |||||||| | |||||  |||| |||| ||||||| ||| | |||||||||| ||||||||||| ||| | | || ||||||||||||||||    
T  9826912 gattagtcactttagttcctgaatcagaaaagagtagtcacttaagtacttgaatgcagagaaattgcaaaacagtgcttgaacgtagactctgttagtc 9826813  T
Q  219 aattt 223  Q
    |||||    
T  9826812 aattt 9826808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 114 - 190
Target Start/End: Complemental strand, 11822012 - 11821936
Alignment:
Q  114 tgggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaa 190  Q
    ||||| |||||| |||||||||||| ||| ||||| ||||  | ||||||||||||||||||||| |||||||||||    
T  11822012 tgggaaattagttactttagtccttcaatgggaaatgagtacttactttagtccctgaatgcagagaaattgcaaaa 11821936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 117 - 265
Target Start/End: Original strand, 18500596 - 18500743
Alignment:
Q  117 gagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttag 216  Q
    ||||||||| |||||| | | | |||||||||| |||||||| ||||||| | |||| || ||| |||| |||||| |   |||||||| ||| | ||||    
T  18500596 gagattagtcactttattgcctcaataggaaag-agtcgtcattttagtctcagaatacaaatagattgaaaaataatttttaaatgtaaactatattag 18500694  T
Q  217 tcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
     ||||||| |  ||||||| |||||||||||||||||||||| ||||||    
T  18500695 ccaatttaatccctgaatgtagactctgttagtcaatttagtccctgaa 18500743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 120 - 223
Target Start/End: Original strand, 2634024 - 2634127
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| |||||||||| |||||  |||| |||| |||||||||| | | |||||| || ||||||||||| ||||||| |||||||||| | || ||||    
T  2634024 attagtcactttagtccatgaatgagaaaagagtagtcactttagccgccgaatgctgagaaattgcaaaacagtccctgaatgtagactttattggtca 2634123  T
Q  220 attt 223  Q
    ||||    
T  2634124 attt 2634127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 191 - 363
Target Start/End: Complemental strand, 18836454 - 18836278
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcag 284  Q
    |||||||| |||| |||||| |||||||| ||||||  ||||||| ||||||  ||||||| |||||| | | ||||||||||      |  ||||| ||    
T  18836454 tagtccctgaatgcagactccgttagtca-tttagtccctgaatgtagactccattagtcactttagtccataaaattgaccaacagcgttaacatttag 18836356  T
Q  285 ggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattc 363  Q
    |||||| |||| ||||| ||| |||||||||| |||||||||||||  | || ||||||||||| ||| ||||||||||    
T  18836355 ggactgttttg-aatttatctgcattcagggactaaagtgactactcatttctcattcagggacaaaaatgactaattc 18836278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 30470842 - 30470921
Alignment:
Q  144 ggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaattt 223  Q
    ||||| |||| ||||||||||| |||||||||||| ||||||||||| | |||||||||||||  | |||| ||||||||    
T  30470842 ggaaatgagtagtcactttagttcctgaatgcagagaaattgcaaaacactccctaaatgtagcatttgttggtcaattt 30470921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 370
Target Start/End: Complemental strand, 55382660 - 55382569
Alignment:
Q  279 attcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattccccttta 370  Q
    ||||| |||||| |||||||||||||| |||||| ||| |||||||||||||  | | ||||||| | |||||| |||||||||| ||||||    
T  55382660 attcaaggactgctttgcaatttctctgcattcacggactaaagtgactactcattttccattcaagaactaaaatgactaattctccttta 55382569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 191 - 261
Target Start/End: Complemental strand, 1387486 - 1387416
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcc 261  Q
    ||||| || |||||||||| ||||||||| ||||||| ||||||||| || | ||||||||||||||||||    
T  1387486 tagtcgctgaatgtagactttgttagtcactttagttcctgaatgcaaaccccgttagtcaatttagttcc 1387416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 10757765 - 10757704
Alignment:
Q  204 tagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    |||||||||||||  ||||||||  |||||||||||||| ||||||||||||||| ||||||    
T  10757765 tagactctgttagcgaatttagtccctgaatgcagactccgttagtcaatttagtccctgaa 10757704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 10970936 - 10970875
Alignment:
Q  204 tagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    |||||||||||||  ||||||||  |||||||||||||| ||||||||||||||| ||||||    
T  10970936 tagactctgttagcgaatttagtccctgaatgcagactccgttagtcaatttagtccctgaa 10970875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 30379017 - 30378948
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaa 189  Q
    |||||| |||||||||  | ||||||||| |||| ||||||||||||||| |||||||| ||||||||||    
T  30379017 attagtcactttagtctctaaataggaaatgagtagtcactttagtcccttaatgcagagaaattgcaaa 30378948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 3391251 - 3391183
Alignment:
Q  155 gtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaattt 223  Q
    |||||||||||| ||||||||||| ||||||||||| | ||  | |||||||||| |||||||||||||    
T  3391251 gtcactttagtctctgaatgcagagaaattgcaaaacaatcattgaatgtagactttgttagtcaattt 3391183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 212 - 330
Target Start/End: Complemental strand, 1387433 - 1387310
Alignment:
Q  212 gttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca-----tatacattcagggactgatttgcaatttctcta 306  Q
    |||||||||||||||| | ||||| |||||  |||||||| |||||| ||| | |||||| |     |||||||||| |||||| |||| |||||||||     
T  1387433 gttagtcaatttagttccggaatgtagacttcgttagtcactttagtccctaatattgactaacaaatatacattcaaggactgctttgtaatttctctg 1387334  T
Q  307 cattcagggattaaagtgactact 330  Q
    |||||| ||| |||| ||||||||    
T  1387333 cattcatggactaaaatgactact 1387310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 273
Target Start/End: Complemental strand, 10380768 - 10380689
Alignment:
Q  194 tccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca 273  Q
    ||||| |||| |||||  |||||||||||||||  || |||| |||||| |||||||| |||||| ||||||||||||||    
T  10380768 tccctgaatgcagacttcgttagtcaatttagtccctaaatgtagactcagttagtcactttagtccctgaaattgacca 10380689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 152 - 223
Target Start/End: Complemental strand, 47144935 - 47144865
Alignment:
Q  152 gtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaattt 223  Q
    |||||||||| ||||| |||||||| ||||||||||||| |||| |||||| || ||| |||||||||||||    
T  47144935 gtcgtcacttcagtcc-tgaatgcaaataaattgcaaaacagtctctaaatataaactttgttagtcaattt 47144865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 5324891 - 5324849
Alignment:
Q  223 tagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    |||||||||| ||||||||||||||||||||||||||| ||||    
T  5324891 tagtttctgattgcagactctgttagtcaatttagttcatgaa 5324849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 2232402 - 2232475
Alignment:
Q  150 gagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaattt 223  Q
    |||| |||| ||||||||||||||  ||| ||||||||||| | ||||| |||||||| |||||| ||||||||    
T  2232402 gagtagtcaatttagtccctgaatagagagaaattgcaaaacaatccctcaatgtagattctgttggtcaattt 2232475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 30471012 - 30471097
Alignment:
Q  276 tacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaat 361  Q
    ||||||||||||||  ||| |||||| |||||||||||| | ||||||||| |||  | | | |||||| ||||||||||||||||    
T  30471012 tacattcagggactattttacaatttatctacattcaggaactaaagtgacgactctttttctattcagagactaaagtgactaat 30471097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 200 - 265
Target Start/End: Complemental strand, 37695099 - 37695034
Alignment:
Q  200 aatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    |||| |||||||||||||||||||| |  || ||||||||| | ||||||||||||||| ||||||    
T  37695099 aatgcagactctgttagtcaatttaatccctaaatgcagaccccgttagtcaatttagtccctgaa 37695034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 55382578 - 55382647
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaa 189  Q
    |||||| | |||||| ||||||| | ||| |||| ||||||||||||| |||||||||| ||||||||||    
T  55382578 attagtcattttagttcttgaatggaaaatgagtagtcactttagtccgtgaatgcagagaaattgcaaa 55382647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 274 - 362
Target Start/End: Complemental strand, 9826719 - 9826631
Alignment:
Q  274 tatacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaatt 362  Q
    |||||||||||  |||  |||||||||| ||| |||||| ||| ||||||||  | |||| ||| |||||||||| |||||||||||||    
T  9826719 tatacattcagaaactattttgcaatttatctgcattcatggactaaagtgataatttctttcctattcagggaccaaagtgactaatt 9826631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 158 - 224
Target Start/End: Original strand, 8951058 - 8951124
Alignment:
Q  158 actttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaattta 224  Q
    ||||||||||||||||| | | ||||||||||| ||||  | ||||||||||| ||| |||||||||    
T  8951058 actttagtccctgaatgtaaagaaattgcaaaacagtctttgaatgtagactcagttggtcaattta 8951124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 22018044 - 22018129
Alignment:
Q  276 tacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaat 361  Q
    ||||||||||||||  |||||||||| ||| ||||||| ||  ||| |||| |||  | ||| ||| |||||||||||||||||||    
T  22018044 tacattcagggactattttgcaatttatctgcattcagagacgaaaatgacgactcatttcctatttagggactaaagtgactaat 22018129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 47943642 - 47943727
Alignment:
Q  276 tacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaat 361  Q
    ||||||||||||||  |||||||||| ||| |||| | ||| ||||||||| |||  | ||| ||||||||||||||  |||||||    
T  47943642 tacattcagggactattttgcaatttatctgcatttaaggactaaagtgacgactcatttcctattcagggactaaaacgactaat 47943727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 258
Target Start/End: Complemental strand, 55382730 - 55382665
Alignment:
Q  193 gtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagt 258  Q
    ||||||||||| ||| || |||||||||||||||  ||| ||| |||||| |||||||| ||||||    
T  55382730 gtccctaaatgcagattccgttagtcaatttagtccctggatgtagactccgttagtcactttagt 55382665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 3370068 - 3370128
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtca 251  Q
    |||||||| |||| |||||  ||||||||||||||| ||| |||| ||||||| |||||||    
T  3370068 tagtccctgaatgcagacttcgttagtcaatttagtctcttaatgtagactctattagtca 3370128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 130; Significance: 5e-67; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 155 - 369
Target Start/End: Complemental strand, 32092971 - 32092751
Alignment:
Q  155 gtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatt 254  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||  ||||||| |||||  |||||||| ||    
T  32092971 gtcactttagtccctgaatgcagataaattgaaaaatagtccctgaatgtagactctgttagtcaatttagtccctgaatgtagacttcgttagtcactt 32092872  T
Q  255 tagttcctgaaattgacca------tatacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggac 348  Q
    |||||||||| |||||| |      | ||||||||||||||| |||||||||||||| |||||||||| |||||||||||||  | ||||||||||||||    
T  32092871 tagttcctgagattgacaaacagagtctacattcagggactgttttgcaatttctctgcattcagggactaaagtgactactcatttcccattcagggac 32092772  T
Q  349 taaagtgactaattccccttt 369  Q
    |||||||||||||||||||||    
T  32092771 taaagtgactaattccccttt 32092751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 139 - 265
Target Start/End: Original strand, 22092879 - 22093005
Alignment:
Q  139 gaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaatttagtttctgaatgcag 238  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||| |||||||||||||||||||| ||||||| ||||||||||    
T  22092879 gaataggaaaggagtcgtcactttagtccttgattgcagataaattgtaaaatagtccctgaatgtagactctgttagtcagtttagttcctgaatgcag 22092978  T
Q  239 actctgttagtcaatttagttcctgaa 265  Q
    ||||  || ||||||||||| ||||||    
T  22092979 actccattcgtcaatttagtccctgaa 22093005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 113 - 258
Target Start/End: Original strand, 31819908 - 31820052
Alignment:
Q  113 ttgggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctg 212  Q
    ||||||||||||| ||||||||||  ||||||||||||| |||||| |||||||||| ||||||||||||||| ||||||||| || |||||||||||||    
T  31819908 ttgggagattagtcactttagtccc-gaataggaaaggaatcgtcattttagtccctaaatgcagataaattggaaaatagtcactgaatgtagactctg 31820006  T
Q  213 ttagtcaatttagtttctgaatgcagactctgttagtcaatttagt 258  Q
    |||||| |||||||   |||||||||||| | ||||||||||||||    
T  31820007 ttagtccatttagtccttgaatgcagactttcttagtcaatttagt 31820052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 115 - 265
Target Start/End: Complemental strand, 39598791 - 39598641
Alignment:
Q  115 gggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtt 214  Q
    |||| |||||| |||||||||| | |||||||||| | |  ||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||    
T  39598791 gggatattagtcactttagtccctcaataggaaagaaattttcattttagtcactgaatgcagataaattgcaaaatagtccctgaatgtagactttgtt 39598692  T
Q  215 agtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
     |||||||||||  ||||||| | |||| ||||||||||||||| ||||||    
T  39598691 ggtcaatttagtcgctgaatgtatactccgttagtcaatttagtccctgaa 39598641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 31499594 - 31499491
Alignment:
Q  155 gtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatt 254  Q
    ||||||||| ||  |||||| |||||||||| |||||||||||| |||||||| ||||||||||| |||||||||||||||||||||| |||||||||||    
T  31499594 gtcactttaatctttgaatgtagataaattgtaaaatagtccctgaatgtagaatctgttagtcattttagtttctgaatgcagactccgttagtcaatt 31499495  T
Q  255 tagt 258  Q
    ||||    
T  31499494 tagt 31499491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 120 - 221
Target Start/End: Original strand, 32092759 - 32092860
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| |||||||||| ||||| ||||| |||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||| ||||    
T  32092759 attagtcactttagtccctgaatgggaaatgagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagactctgtttgtca 32092858  T
Q  220 at 221  Q
    ||    
T  32092859 at 32092860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 115 - 265
Target Start/End: Complemental strand, 24007164 - 24007014
Alignment:
Q  115 gggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtt 214  Q
    |||| |||||| ||||| |||||||| ||||||| ||||||| |||||||||| ||||| ||||||||||| ||||||| |  | |||||||||||||||    
T  24007164 gggaaattagtcactttggtccttgactaggaaatgagtcgttactttagtccttgaatacagataaattgtaaaatagactttgaatgtagactctgtt 24007065  T
Q  215 agtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    ||||||||||||   |||||||||| || |||  ||||| |||| ||||||    
T  24007064 agtcaatttagtccatgaatgcagattccgttgatcaatgtagtacctgaa 24007014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 130 - 265
Target Start/End: Original strand, 8219150 - 8219284
Alignment:
Q  130 ttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaatttagtttc 229  Q
    |||||| || ||||||||| || |||||| |||| | | | | |||| |||||||| |||||||||  | ||||||||||||||||||||||||||||||    
T  8219150 ttagtcattaaataggaaatgaatcgtcattttaattcttaagtgcaaataaattgtaaaatagtct-tgaatgtagactctgttagtcaatttagtttc 8219248  T
Q  230 tgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    ||||||||||||| ||||||||||||| | ||||||    
T  8219249 tgaatgcagactccgttagtcaatttaatccctgaa 8219284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 276 - 373
Target Start/End: Complemental strand, 24006965 - 24006868
Alignment:
Q  276 tacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccctttaata 373  Q
    ||||||||||||||| |||||||||||||| |||||||||| ||||||||||| || | ||||||||||  || ||||||||| ||||||||||||||    
T  24006965 tacattcagggactgttttgcaatttctctgcattcagggactaaagtgactaattttttcccattcagaaaccaaagtgactgattcccctttaata 24006868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 191 - 368
Target Start/End: Original strand, 22092963 - 22093146
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcag 284  Q
    |||| ||| |||| ||||||  || |||||||||||  ||||||  |||||| ||| |||| |||||| |||||| |||||||      | |||||||||    
T  22092963 tagttcctgaatgcagactccattcgtcaatttagtccctgaatatagactccgtttgtcactttagtccctgaatttgaccaacagaatctacattcag 22093062  T
Q  285 ggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccctt 368  Q
     ||||| ||||||||||||||||||||||||| |||||| |||| |  | | ||||||||| |||||||||| |||||||||||    
T  22093063 agactgttttgcaatttctctacattcagggactaaagtaactaatcattttccattcaggaactaaagtgattaattcccctt 22093146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 24006915 - 24006983
Alignment:
Q  155 gtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaattt 223  Q
    |||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||| |||||||    
T  24006915 gtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagactctgttactcaattt 24006983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 39598683 - 39598603
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgac 271  Q
    ||||| || |||||| |||| |||||||||||||||  ||||||| |||||| |||||||| |||||| ||| ||||||||    
T  39598683 tagtcgctgaatgtatactccgttagtcaatttagtccctgaatgtagactccgttagtcactttagtccctaaaattgac 39598603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 22093101 - 22093039
Alignment:
Q  158 actttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaa 220  Q
    ||||||||||||||||| ||| ||||||||||| |||| || |||||||| |||||| |||||    
T  22093101 actttagtccctgaatgtagagaaattgcaaaacagtctctgaatgtagattctgttggtcaa 22093039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 39598701 - 39598786
Alignment:
Q  276 tacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaat 361  Q
    ||||||||||||||  |||||||||| ||| ||||||| || |||| |||  | |||| ||| ||| |||||||||||||||||||    
T  39598701 tacattcagggactattttgcaatttatctgcattcagtgactaaaatgaaaatttctttcctattgagggactaaagtgactaat 39598786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 151 - 225
Target Start/End: Original strand, 17914037 - 17914110
Alignment:
Q  151 agtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaatttag 225  Q
    |||||||| |||||||| | || ||| ||||||||||||||| ||| | |||||||| | |||||||||||||||    
T  17914037 agtcgtcattttagtcc-taaacgcaaataaattgcaaaataatccttgaatgtagattttgttagtcaatttag 17914110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 31820017 - 31820097
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgac 271  Q
    |||||| | |||| ||||| | |||||||||||||| |||||||| | |||| |||| ||| |||||| ||| ||||||||    
T  31820017 tagtccttgaatgcagactttcttagtcaatttagtctctgaatgtatactccgttaatcactttagtccctaaaattgac 31820097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 276 - 328
Target Start/End: Original strand, 32092921 - 32092973
Alignment:
Q  276 tacattcagggactgatttgcaatttctctacattcagggattaaagtgacta 328  Q
    ||||||||||||||  ||| |||||| ||| |||||||||| |||||||||||    
T  32092921 tacattcagggactatttttcaatttatctgcattcagggactaaagtgacta 32092973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 129; Significance: 2e-66; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 115 - 364
Target Start/End: Original strand, 36150843 - 36151098
Alignment:
Q  115 gggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtt 214  Q
    ||||||||||| |||||||||| | ||||||||| |||||||||||| | ||| |||||||||||||||||||||||| |||||| ||||||||||||||    
T  36150843 gggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatccatgaatgcagataaattgcaaaataatccctagatgtagactctgtt 36150942  T
Q  215 agtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcagggactgatttgcaatttctctaca 308  Q
    |||||||||||| |||||||| | |||| |||||||| |||||| | ||||||||||||      | |||||||||| |||| ||||||||||||| |||    
T  36150943 agtcaatttagtctctgaatgtaaactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaggtactgttttgcaatttctcaaca 36151042  T
Q  309 ttcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcc 364  Q
    |||| |||||||||||||||||  | | |||| |||||||||||||||||||||||    
T  36151043 ttcaaggattaaagtgactactcattttccatccagggactaaagtgactaattcc 36151098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 130 - 265
Target Start/End: Original strand, 27508586 - 27508721
Alignment:
Q  130 ttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaatttagtttc 229  Q
    ||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||  |    
T  27508586 ttagtccctgaataggaaatgagtcatcactttagtccctgaatgcagataaattgcaaaatagtccctgaatgtagactatgttagtcaatttagtccc 27508685  T
Q  230 tgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    ||||||||||||||||||||||||||||| ||||||    
T  27508686 tgaatgcagactctgttagtcaatttagtccctgaa 27508721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 113 - 265
Target Start/End: Complemental strand, 38761278 - 38761126
Alignment:
Q  113 ttgggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctg 212  Q
    ||||||||||| | |||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||    
T  38761278 ttgggagattaatcactttagtccctgaataggaaatgagtcatcactttagtccctgaatgcagataaattgcaaaatagtccctgaatgtagactttg 38761179  T
Q  213 ttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    ||| ||||||||||    |||||||||||||||||||||||||||| ||||||    
T  38761178 ttaatcaatttagtcctcgaatgcagactctgttagtcaatttagtccctgaa 38761126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 113 - 364
Target Start/End: Complemental strand, 43257518 - 43257261
Alignment:
Q  113 ttgggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctg 212  Q
    ||||||||| ||| |||| | ||| ||||||| ||| |||||||||||||| |||||||||||||||||||||||||||| ||| | ||| |||||||||    
T  43257518 ttgggagatcagtcacttcaatccctgaatagaaaatgagtcgtcactttaatccctgaatgcagataaattgcaaaataatccttgaatatagactctg 43257419  T
Q  213 ttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacc------atatacattcagggactgatttgcaatttctcta 306  Q
    ||||||||||||||  || |||| |||||  ||||||||||||| | |||||||||||||      || ||||||||| ||||  ||| |||||||| |     
T  43257418 ttagtcaatttagtccctaaatgtagacttcgttagtcaatttactccctgaaattgaccaacaaaatctacattcagagactcttttacaatttctatg 43257319  T
Q  307 cattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcc 364  Q
    |||||||||| ||| ||||||| |  | | ||||||||||| ||||||||||||||||    
T  43257318 cattcagggactaaggtgactattcattttccattcagggattaaagtgactaattcc 43257261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 191 - 366
Target Start/End: Original strand, 27508679 - 27508860
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcag 284  Q
    |||||||| |||| ||||||||||||||||||||||  ||||||| |||||| |||||||| |||||| | |||||||||| |      | |||||||||    
T  27508679 tagtccctgaatgcagactctgttagtcaatttagtccctgaatgtagactccgttagtcactttagtccatgaaattgactaacagagtctacattcag 27508778  T
Q  285 ggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccc 366  Q
    |||||| |||||||||||||||| |||||||| ||||||||||||| || | ||||||||||| ||||||||||||||||||    
T  27508779 ggactgttttgcaatttctctacgttcagggactaaagtgactactccttttccattcagggattaaagtgactaattcccc 27508860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 6441588 - 6441485
Alignment:
Q  155 gtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatt 254  Q
    |||||||||||| ||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||  ||||||||||||||||||||||||||    
T  6441588 gtcactttagtctctgaatgcagataaattgcaaaataatccctgaatgtagactttgttagtcaatttagtccctgaatgcagactctgttagtcaatt 6441489  T
Q  255 tagt 258  Q
    ||||    
T  6441488 tagt 6441485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 115 - 265
Target Start/End: Complemental strand, 5080393 - 5080243
Alignment:
Q  115 gggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtt 214  Q
    |||| |||||| |||||||||  |||||||||||| |||||| | |||||||||||||||||||||||||| ||||||||| || |||||| ||| | ||    
T  5080393 gggaaattagtcactttagtctctgaataggaaagaagtcgttattttagtccctgaatgcagataaattgtaaaatagtctctgaatgtaaactatatt 5080294  T
Q  215 agtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    ||||||||||||  |||||||||||||| |||| |||||||||| ||||||    
T  5080293 agtcaatttagtccctgaatgcagactccgttaatcaatttagtacctgaa 5080243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 151 - 258
Target Start/End: Complemental strand, 14197707 - 14197600
Alignment:
Q  151 agtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtc 250  Q
    |||||||| ||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |  |||||||||||||| |||||||    
T  14197707 agtcgtcattttagcccctgaatgcagataaattgcaatatagtccctgaatgtagactctgttagtcaatttaatccctgaatgcagactccgttagtc 14197608  T
Q  251 aatttagt 258  Q
    ||||||||    
T  14197607 aatttagt 14197600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 115 - 264
Target Start/End: Original strand, 3404453 - 3404601
Alignment:
Q  115 gggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtt 214  Q
    |||| |||||| |||||||||||||||||| |||| | |||||| |||||| ||| || |||||||||||||||| |||||| | |||||| ||||||||    
T  3404453 gggacattagtcactttagtccttgaatagaaaagaaatcgtcattttagtacctaaacgcagataaattgcaaagtagtccatgaatgtacactctgtt 3404552  T
Q  215 agtcaatttagtttctgaatgcagactctgttagtcaatttagttcctga 264  Q
    ||||||||||||  || ||||||| ||||||||||||||||||| |||||    
T  3404553 agtcaatttagtccctaaatgcag-ctctgttagtcaatttagtccctga 3404601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 200 - 366
Target Start/End: Complemental strand, 38761159 - 38760989
Alignment:
Q  200 aatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcagggactgatt 293  Q
    |||| ||||||||||||||||||||||  ||||||||||||||||||||||| |||||| ||  ||||||| ||      | ||||| |||| |||| ||    
T  38761159 aatgcagactctgttagtcaatttagtccctgaatgcagactctgttagtcactttagtcccaaaaattgatcaacagagtctacatccagg-actgttt 38761061  T
Q  294 tgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccc 366  Q
    ||||||||||||||||||| | | |||||||||||||||| |||||||||||||||||| |||||||||||||    
T  38761060 tgcaatttctctacattcacgaactaaagtgactacttctttcccattcagggactaaa-tgactaattcccc 38760989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 116 - 258
Target Start/End: Original strand, 15000641 - 15000784
Alignment:
Q  116 ggagattagtgactttag-tccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtt 214  Q
    |||||||||| ||||||| ||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||| || |  |||||||| | ||||    
T  15000641 ggagattagtcactttaggtccctgaataggaaaggaattgtcactttagtccctgaatgcagataaattgcaaaatattctcagaatgtagattatgtt 15000740  T
Q  215 agtcaatttagtttctgaatgcagactctgttagtcaatttagt 258  Q
    ||||| ||||||   |||||| |||||| | |||||||||||||    
T  15000741 agtcagtttagtccttgaatgaagactccgatagtcaatttagt 15000784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 194 - 363
Target Start/End: Complemental strand, 14197632 - 14197457
Alignment:
Q  194 tccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacc------atatacattcaggga 287  Q
    ||||| |||| |||||| ||||||||||||||| ||| |||| |||||| |||||||| |||||| |||||||||||||      || |||||||   ||    
T  14197632 tccctgaatgcagactccgttagtcaatttagtctctcaatgtagactccgttagtcactttagtccctgaaattgaccaacagaatctacattcgatga 14197533  T
Q  288 ctgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattc 363  Q
    ||| |||||||||||||| |||| ||||| |||||||||||||| | ||||||| ||| |||||||||| ||||||    
T  14197532 ctgttttgcaatttctctgcatttagggactaaagtgactacttttttcccattgaggaactaaagtgattaattc 14197457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 130 - 258
Target Start/End: Complemental strand, 37787952 - 37787828
Alignment:
Q  130 ttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaatttagtttc 229  Q
    ||||||| |||||| |||| || ||| ||||||||||||||||||||   ||||||||||||||| | | |||||||||| ||||||||||||||||  |    
T  37787952 ttagtccctgaataagaaatgaatcgccactttagtccctgaatgca---aaattgcaaaatagttc-tgaatgtagactttgttagtcaatttagtccc 37787857  T
Q  230 tgaatgcagactctgttagtcaatttagt 258  Q
    |||||||| ||||||||||||||||||||    
T  37787856 tgaatgcatactctgttagtcaatttagt 37787828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 191 - 359
Target Start/End: Complemental strand, 5080285 - 5080111
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcag 284  Q
    |||||||| |||| |||||| |||| ||||||||||  ||||||| |||||| |||| ||| |||||| | |||||||||| |      | ||||||||     
T  5080285 tagtccctgaatgcagactccgttaatcaatttagtacctgaatgtagactccgttaatcattttagtccttgaaattgactaacagagtctacattcaa 5080186  T
Q  285 ggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgacta 359  Q
     ||||| |||||| ||||||| |||||||| | |||||||||||||| | |||||||||||||||||||||||||    
T  5080185 agactgttttgcattttctctgcattcaggaactaaagtgactacttttttcccattcagggactaaagtgacta 5080111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 120 - 223
Target Start/End: Complemental strand, 27508855 - 27508752
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| |||||| ||| ||||| | |||||||| |||||||||||||||||| | ||| ||||||||||| ||||||| ||||||||||||||||||||    
T  27508855 attagtcactttaatccctgaatggaaaaggagtagtcactttagtccctgaacgtagagaaattgcaaaacagtccctgaatgtagactctgttagtca 27508756  T
Q  220 attt 223  Q
    ||||    
T  27508755 attt 27508752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 127 - 223
Target Start/End: Original strand, 15272330 - 15272426
Alignment:
Q  127 actttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaattt 223  Q
    |||||||||| |||||  |||| |||| |||| ||||||||||||||||||| ||||||||||||||||||| |||||||||| |||| ||||||||    
T  15272330 actttagtccgtgaatgagaaatgagtagtcattttagtccctgaatgcagagaaattgcaaaatagtccctgaatgtagactttgttggtcaattt 15272426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 191 - 328
Target Start/End: Complemental strand, 6441520 - 6441378
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca-----tatacattcagg 285  Q
    |||||||| |||| |||||||||||||||||||||| ||| |||| |||||| |||||||| ||| || | |||||||||| |     | ||||||||||    
T  6441520 tagtccctgaatgcagactctgttagtcaatttagtctctaaatgtagactccgttagtcacttttgtccttgaaattgactaaagagtctacattcagg 6441421  T
Q  286 gactgatttgcaatttctctacattcagggattaaagtgacta 328  Q
    ||||| |||||||||||| | |||||||||| || ||||||||    
T  6441420 gactgttttgcaatttctttgcattcagggactatagtgacta 6441378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 191 - 362
Target Start/End: Complemental strand, 45013024 - 45012848
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcag 284  Q
    |||||||| |||| |||||| ||||||||||||| | |||||||| |||||| | || ||| |||||| ||||||||||||||      | ||||||  |    
T  45013024 tagtccctgaatgcagactccgttagtcaatttaatctctgaatgtagactccgctaatcactttagtccctgaaattgaccaatagagtctacattt-g 45012926  T
Q  285 ggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaatt 362  Q
     || || |||||||||||| | ||||||| || ||||||||||||| || |||||||||||||| |||||||||||||    
T  45012925 agattgttttgcaatttctttgcattcagagactaaagtgactactcctttcccattcagggaccaaagtgactaatt 45012848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 120 - 210
Target Start/End: Complemental strand, 45013150 - 45013060
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactc 210  Q
    |||||| |||||||||| | ||||||||| ||||||||| |||||||| |||||||| ||||||||||||||||||| | ||| |||||||    
T  45013150 attagtcactttagtcccttaataggaaaagagtcgtcagtttagtccttgaatgcaaataaattgcaaaatagtccttgaatatagactc 45013060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 120 - 221
Target Start/End: Complemental strand, 3404735 - 3404634
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| |||||||| | | ||| | ||| |||| |||||||||| ||||||||||||| ||||||||||||||||| | ||||||||||| ||||||||    
T  3404735 attagtcactttagttcctaaatggaaaaagagtagtcactttaggccctgaatgcagagaaattgcaaaatagtccttgaatgtagactcggttagtca 3404636  T
Q  220 at 221  Q
    ||    
T  3404635 at 3404634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 122 - 223
Target Start/End: Original strand, 5080111 - 5080212
Alignment:
Q  122 tagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaat 221  Q
    |||| |||||||||| ||||| |||||  ||| ||||||||||| |||||||||||| ||| ||||||| ||||  | ||||||||||||||||||||||    
T  5080111 tagtcactttagtccctgaatgggaaaaaagtagtcactttagttcctgaatgcagagaaaatgcaaaacagtctttgaatgtagactctgttagtcaat 5080210  T
Q  222 tt 223  Q
    ||    
T  5080211 tt 5080212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 191 - 369
Target Start/End: Original strand, 15000749 - 15000933
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcag 284  Q
    |||||| | |||| |||||| | |||||||||||||  || |||| |||||| ||| | || |||||| ||||||||||||||      | |||||| ||    
T  15000749 tagtccttgaatgaagactccgatagtcaatttagtcccttaatgtagactccgttggacactttagtccctgaaattgaccaataaagtctacatttag 15000848  T
Q  285 ggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattccccttt 369  Q
    |||||| ||||||||| |||| ||| ||  || |||||||||||||  | ||||||||||||||||||||| |||||||| ||||    
T  15000849 ggactgttttgcaattcctctgcatccaaagactaaagtgactactcatttcccattcagggactaaagtggctaattcctcttt 15000933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 29934553 - 29934472
Alignment:
Q  113 ttgggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagt 194  Q
    ||||||||||||| ||||||||||||| ||||||||  |||||||||||||||| || || | |||||||||||||||||||    
T  29934553 ttgggagattagttactttagtccttggataggaaaatagtcgtcactttagtctcttaaggtagataaattgcaaaatagt 29934472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 223
Target Start/End: Complemental strand, 15000918 - 15000822
Alignment:
Q  127 actttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaattt 223  Q
    |||||||||| ||||| ||||| |||| ||||||||||||  || |||||||  |||||||||| |||||||||||||||||| | || ||||||||    
T  15000918 actttagtccctgaatgggaaatgagtagtcactttagtctttggatgcagaggaattgcaaaacagtccctaaatgtagactttattggtcaattt 15000822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 276 - 364
Target Start/End: Complemental strand, 15272408 - 15272320
Alignment:
Q  276 tacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcc 364  Q
    ||||||||||||||  |||||||||||||| |||||||||| |||| ||||||||  | || |||||| |||||||||||||| |||||    
T  15272408 tacattcagggactattttgcaatttctctgcattcagggactaaaatgactactcatttctcattcacggactaaagtgactcattcc 15272320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 223
Target Start/End: Original strand, 45012849 - 45012951
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| ||||| |||| ||||| |||||||||| |||||||||||| ||||||||| | ||||||||||| | || | ||||||||||||| || ||||    
T  45012849 attagtcactttggtccctgaatgggaaaggagtagtcactttagtctctgaatgcaaagaaattgcaaaacaatctc-aaatgtagactctattggtca 45012947  T
Q  220 attt 223  Q
    ||||    
T  45012948 attt 45012951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 6441380 - 6441447
Alignment:
Q  155 gtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaattt 223  Q
    |||||| ||||||||||||||| | ||||||||||| ||||||| |||||||||||| |||||||||||    
T  6441380 gtcactatagtccctgaatgcaaagaaattgcaaaacagtccctgaatgtagactct-ttagtcaattt 6441447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 188 - 256
Target Start/End: Complemental strand, 45013059 - 45012991
Alignment:
Q  188 aaatagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaattta 256  Q
    ||||||| ||| |||||||| | ||||||||||||||||  |||||||||||||| |||||||||||||    
T  45013059 aaatagttcctgaatgtagagtttgttagtcaatttagtccctgaatgcagactccgttagtcaattta 45012991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 276 - 366
Target Start/End: Original strand, 3404650 - 3404740
Alignment:
Q  276 tacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccc 366  Q
    |||||||| |||||  |||||||||||||| |||||||||  |||||||||||||  | | ||||| ||| ||||||||||||||| ||||    
T  3404650 tacattcaaggactattttgcaatttctctgcattcagggcctaaagtgactactctttttccatttaggaactaaagtgactaatacccc 3404740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 38761186 - 38761271
Alignment:
Q  276 tacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaat 361  Q
    ||||||||||||||  |||||||||| ||| |||||||||| ||||||||  |||  | ||| |||||||||||||||||| ||||    
T  38761186 tacattcagggactattttgcaatttatctgcattcagggactaaagtgatgactcatttcctattcagggactaaagtgattaat 38761271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 120 - 223
Target Start/End: Complemental strand, 36151095 - 36150992
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| |||||||||| || || | ||| |||| ||||||||| ||| ||||||  || ||||||||||| ||| ||| |||||||||| |||| ||||    
T  36151095 attagtcactttagtccctggatggaaaatgagtagtcactttaatccttgaatgttgagaaattgcaaaacagtacctgaatgtagactttgttggtca 36150996  T
Q  220 attt 223  Q
    ||||    
T  36150995 attt 36150992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 362
Target Start/End: Original strand, 5080303 - 5080389
Alignment:
Q  276 tacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaatt 362  Q
    ||||||||| ||||  ||| |||||| ||| |||||||||| |||| | || |||||| ||| |||||| |||||||||||||||||    
T  5080303 tacattcagagactattttacaatttatctgcattcagggactaaaataacgacttctttcctattcagagactaaagtgactaatt 5080389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 38761002 - 38761095
Alignment:
Q  129 tttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaattt 223  Q
    |||||||| ||||| |||||| ||| ||||||||||| | |||||| ||| ||||||||||| ||| |||  ||||||||||||||  |||||||    
T  38761002 tttagtccctgaatgggaaagaagtagtcactttagttcgtgaatgtagagaaattgcaaaacagt-cctggatgtagactctgttgatcaattt 38761095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 27508661 - 27508577
Alignment:
Q  276 tacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaat 361  Q
    ||||||||||||||  |||||||||| ||| |||||||||| ||||||||  |||  | ||| ||||||||||| |||||||||||    
T  27508661 tacattcagggactattttgcaatttatctgcattcagggactaaagtgatgactcatttcctattcagggact-aagtgactaat 27508577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 14197494 - 14197562
Alignment:
Q  155 gtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaattt 223  Q
    ||||||||||||||| |||||||| ||||||||||| ||||    |||||||| |||||| ||||||||    
T  14197494 gtcactttagtccctaaatgcagagaaattgcaaaacagtcatcgaatgtagattctgttggtcaattt 14197562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 223
Target Start/End: Original strand, 43257264 - 43257367
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| |||||| ||| ||||| | ||| || | ||||| |||||||||||||||| | |||||| |||| |||| || |||||||| | |||| ||||    
T  43257264 attagtcactttaatccctgaatggaaaatgaatagtcaccttagtccctgaatgcatagaaattgtaaaagagtctctgaatgtagattttgttggtca 43257363  T
Q  220 attt 223  Q
    ||||    
T  43257364 attt 43257367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 4617364 - 4617287
Alignment:
Q  147 aaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaattta 224  Q
    |||||||||||||  ||| || ||| || ||| |||||||||||||||| || |||||||| | ||||| ||||||||    
T  4617364 aaggagtcgtcacaatagcccatgagtgtagagaaattgcaaaatagtctctgaatgtagattttgttaatcaattta 4617287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 118; Significance: 7e-60; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 120 - 366
Target Start/End: Complemental strand, 12107114 - 12106862
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| |||||||||  | |||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||| | |    
T  12107114 attagtcactttagtctctaaataggaaagaagtcgtcactttagtccttgaatgcagataaattgcaaaataatccctgaatgtagactctgttaatta 12107015  T
Q  220 atttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcagggactgatttgcaatttctctacattcag 313  Q
    | |||||  || |||| |||||  ||| |||| |||||| ||||||||||||||      | ||||| ||||||||| |||||||||||||| |||||||    
T  12107014 aattagtccctaaatgtagactgcgttcgtcactttagtccctgaaattgaccaacagagtctacatccagggactgttttgcaatttctctgcattcag 12106915  T
Q  314 ggattaaagtgactacttctatcccattcagggactaaagtgactaattcccc 366  Q
    ||| |||||||||||||  | ||||||||||||||||||||||||||||||||    
T  12106914 ggactaaagtgactactcatttcccattcagggactaaagtgactaattcccc 12106862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 113 - 265
Target Start/End: Complemental strand, 25149524 - 25149372
Alignment:
Q  113 ttgggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctg 212  Q
    ||||||||||||| |||||||||| ||||||||||| ||||||||||| ||||| ||||||||||||||| ||||||||| || || |||||||||| ||    
T  25149524 ttgggagattagtcactttagtccctgaataggaaatgagtcgtcactatagtctctgaatgcagataaactgcaaaataatctctgaatgtagactttg 25149425  T
Q  213 ttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||| ||||||    
T  25149424 ttagtcaatttagtctctgaatgcagactctgttagtcaagttagtccctgaa 25149372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 115 - 258
Target Start/End: Original strand, 21124322 - 21124465
Alignment:
Q  115 gggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtt 214  Q
    ||||||||||   ||||||||| ||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||| ||    
T  21124322 gggagattagccgctttagtccctgaataggaaaggagacgtcactttagtctctgaatacagataaattgcaaaatagtctctaaatgtagactctatt 21124421  T
Q  215 agtcaatttagtttctgaatgcagactctgttagtcaatttagt 258  Q
    ||||||||||||  |||||||||||||  |||||||||||||||    
T  21124422 agtcaatttagtccctgaatgcagacttcgttagtcaatttagt 21124465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 115 - 258
Target Start/End: Original strand, 35202593 - 35202736
Alignment:
Q  115 gggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtt 214  Q
    ||||||||||| | ||||||| ||||||||||||| |||  ||| ||||||||||||||||| |||||||||||||| |||| |||||||||||| ||||    
T  35202593 gggagattagtcattttagtcattgaataggaaagaagttatcattttagtccctgaatgcaaataaattgcaaaatggtccttaaatgtagactatgtt 35202692  T
Q  215 agtcaatttagtttctgaatgcagactctgttagtcaatttagt 258  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||    
T  35202693 agtcaatttagttcctgaatgcagattctgttagtcaatttagt 35202736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 118 - 265
Target Start/End: Original strand, 22426845 - 22426991
Alignment:
Q  118 agattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagt 217  Q
    |||||||| |||||||||| ||||||||||| ||||| |||||||||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||    
T  22426845 agattagtcactttagtccctgaataggaaacgagtcatcactttagtccatgaatgc-gataaattgcaaaatagtccctgaatgtagtctctgttagt 22426943  T
Q  218 caatttagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    |||||||||  ||||||| || |||| ||||||||||| || ||||||    
T  22426944 caatttagtccctgaatgtagtctcttttagtcaatttggtccctgaa 22426991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 114 - 256
Target Start/End: Original strand, 21184293 - 21184434
Alignment:
Q  114 tgggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgt 213  Q
    ||||| |||||| |||||||||| ||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||| ||| || ||| | |    
T  21184293 tgggaaattagtcactttagtccctgaataggaaatgagtcgtcactctagtccccgaatgcagataaattgcaaaatagtccctgaatataaact-tat 21184391  T
Q  214 tagtcaatttagtttctgaatgcagactctgttagtcaattta 256  Q
    |||||||||||||  |||||| ||||||| |||| ||||||||    
T  21184392 tagtcaatttagtccctgaatacagactccgttaatcaattta 21184434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 118 - 258
Target Start/End: Original strand, 18323997 - 18324135
Alignment:
Q  118 agattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagt 217  Q
    |||||||| |||||||||  |||| |||||| |  |||||| |||||| | ||||||||||||||||| |||||||||||| |||||||||| | |||||    
T  18323997 agattagtcactttagtcgctgaacaggaaatg--tcgtcattttagttcatgaatgcagataaattgtaaaatagtccctgaatgtagactttattagt 18324094  T
Q  218 caatttagtttctgaatgcagactctgttagtcaatttagt 258  Q
    |||||||||| ||||||||| |||| |||||||||||||||    
T  18324095 caatttagttcctgaatgcaaactccgttagtcaatttagt 18324135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 120 - 265
Target Start/End: Complemental strand, 37544071 - 37543926
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| |||||||||| |||||| ||||| ||||| || ||||||||||||||| ||||||||||||||||||||  | | |||||||| |||||||||    
T  37544071 attagtcactttagtccctgaatatgaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 37543972  T
Q  220 atttagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    ||||| |  ||||||||||| || |||||| |||||||| ||||||    
T  37543971 atttaatccctgaatgcagattccgttagttaatttagtccctgaa 37543926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 118 - 265
Target Start/End: Complemental strand, 22469713 - 22469566
Alignment:
Q  118 agattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagt 217  Q
    |||||||| |||||||||  |||||| |||| |||||||||||||||||| | ||||||||||||||| |||||||| ||  |||||||| |||||||||    
T  22469713 agattagtcactttagtctatgaataagaaatgagtcgtcactttagtccttaaatgcagataaattgtaaaatagttccagaatgtagattctgttagt 22469614  T
Q  218 caatttagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    ||||||| |  |||||| || ||||  |||||||||||||| ||||||    
T  22469613 caatttaatccctgaattcaaactccattagtcaatttagtccctgaa 22469566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 118 - 257
Target Start/End: Complemental strand, 23976370 - 23976233
Alignment:
Q  118 agattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagt 217  Q
    |||||||| |||||||||||  |||| |||| ||||||||| |||||| |||||||| |||||||||| |||||||||||| ||||||| ||||||||||    
T  23976370 agattagtcactttagtcctc-aataagaaatgagtcgtcattttagttcctgaatgtagataaattgtaaaatagtccctgaatgtag-ctctgttagt 23976273  T
Q  218 caatttagtttctgaatgcagactctgttagtcaatttag 257  Q
    ||||||||   |||||||||||||| ||| ||||||||||    
T  23976272 caatttagcccctgaatgcagactccgttggtcaatttag 23976233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 120 - 223
Target Start/End: Original strand, 12106867 - 12106970
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| |||||||||| ||||| ||||| |||| |||||||||||||||||||||||| ||||||||||| |||||||  |||||||||||||| ||||    
T  12106867 attagtcactttagtccctgaatgggaaatgagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctggatgtagactctgttggtca 12106966  T
Q  220 attt 223  Q
    ||||    
T  12106967 attt 12106970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 132 - 258
Target Start/End: Complemental strand, 4289192 - 4289066
Alignment:
Q  132 agtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaatttagtttctg 231  Q
    ||||||||||||| |||| |||||||| ||||||||  |||||||||||| |||||||||||||  | || | ||||| |||||||||||||||| |||     
T  4289192 agtccttgaatagaaaagaagtcgtcattttagtccacgaatgcagataagttgcaaaatagtctttgaacgcagactatgttagtcaatttagtctcta 4289093  T
Q  232 aatgcagactctgttagtcaatttagt 258  Q
    |||||||||| ||||| ||||||||||    
T  4289092 aatgcagactatgttaatcaatttagt 4289066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 191 - 361
Target Start/End: Complemental strand, 25149414 - 25149238
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcag 284  Q
    ||||| || |||| |||||||||||||||| |||||  ||||| | |||| | ||| |||| |||||| | ||||||||||||      | |||||||||    
T  25149414 tagtctctgaatgcagactctgttagtcaagttagtccctgaacgtagacaccgttcgtcactttagtccttgaaattgaccaacagagtctacattcag 25149315  T
Q  285 ggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaat 361  Q
    |||||| |||||||||||| | ||||||||||||||||||||||||  | | |||||||||||||||| ||||||||    
T  25149314 ggactgttttgcaatttctttgcattcagggattaaagtgactactctttttccattcagggactaaaatgactaat 25149238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 120 - 223
Target Start/End: Original strand, 23976090 - 23976194
Alignment:
Q  120 attagtgactttagtccttgaataggaaagga-gtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtc 218  Q
    |||||| |||||||||||||||| | ||| || || ||||||||||| |||||||||||| ||||||||||| ||||||| |||||||||||||||||||    
T  23976090 attagtcactttagtccttgaatggaaaaagaagtagtcactttagttcctgaatgcagagaaattgcaaaacagtccctgaatgtagactctgttagtc 23976189  T
Q  219 aattt 223  Q
    |||||    
T  23976190 aattt 23976194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 131 - 258
Target Start/End: Complemental strand, 24609294 - 24609167
Alignment:
Q  131 tagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaatttagtttct 230  Q
    |||||| | ||||||||||||||| |||||||||| |||||||||| |||||||| |||||||| | |  ||||||  |||||||||||||||||||  |    
T  24609294 tagtccctaaataggaaaggagtcttcactttagttcctgaatgcaaataaattgtaaaatagttcttggatgtaggttctgttagtcaatttagttctt 24609195  T
Q  231 gaatgcagactctgttagtcaatttagt 258  Q
     |||||||||||||||| | ||||||||    
T  24609194 aaatgcagactctgttaattaatttagt 24609167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 202 - 365
Target Start/End: Original strand, 21124473 - 21124642
Alignment:
Q  202 tgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcagggactgatttg 295  Q
    ||||||||| |||||||||||||||  |  | || |||||| ||||| || |||||| | | ||||||||||      | |||||||| |||||| ||||    
T  21124473 tgtagactccgttagtcaatttagtcccctagtgtagactccgttagccactttagtccataaaattgaccaacagagtctacattcaaggactgttttg 21124572  T
Q  296 caatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattccc 365  Q
    ||||||||||||||||||| ||||||||||||||| || || |||||| | |||||||||||||||||||    
T  21124573 caatttctctacattcaggaattaaagtgactactcctttctcattcaagaactaaagtgactaattccc 21124642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 191 - 328
Target Start/End: Original strand, 35202701 - 35202845
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttc-tgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattca 283  Q
    |||| ||| |||| ||| ||||||||||||||||||  | |||||| |||||| |||||||| |||||||||||||||||||||      || |||||||    
T  35202701 tagttcctgaatgcagattctgttagtcaatttagtcccctgaatgtagactccgttagtcactttagttcctgaaattgaccaacagagtaaacattca 35202800  T
Q  284 gggactgatttgcaatttctctacattcagggattaaagtgacta 328  Q
    ||||||| |||||||||||||| |||||||| | |||||||||||    
T  35202801 gggactgttttgcaatttctctgcattcaggaactaaagtgacta 35202845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 191 - 366
Target Start/End: Complemental strand, 4289101 - 4288917
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca---------tatacatt 281  Q
    ||||| ||||||| ||||| ||||| |||||||||| | |||||| ||||||||||||||| |||| | |||||||||||| |         | ||||||    
T  4289101 tagtctctaaatgcagactatgttaatcaatttagtctttgaatgtagactctgttagtcactttaatccctgaaattgactaattaaagagtctacatt 4289002  T
Q  282 cagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccc 366  Q
    |  ||| || ||||||||||||||||||||| | | |||||||||||||| | | ||| |||||||||||| |||||||||||||    
T  4289001 cgaggaatgttttgcaatttctctacattcatgaactaaagtgactactttttttccaatcagggactaaaatgactaattcccc 4288917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 207 - 368
Target Start/End: Original strand, 18324116 - 18324283
Alignment:
Q  207 actctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcagggactgatttgcaatt 300  Q
    |||| |||||||||||||||   | |||| |||||| |||||||| |||||||| ||||||||||||      |  ||||||| |||||| |||||||||    
T  18324116 actccgttagtcaatttagtccttaaatgtagactccgttagtcactttagttcatgaaattgaccagcagagtcgacattcatggactgttttgcaatt 18324215  T
Q  301 tctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccctt 368  Q
    ||||| |||||||||| |||| ||||||| ||| || |||||||||| |||| ||| |||||||||||    
T  18324216 tctctgcattcagggactaaaatgactacgtctttctcattcagggattaaaatgattaattcccctt 18324283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 278 - 365
Target Start/End: Complemental strand, 22469516 - 22469429
Alignment:
Q  278 cattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattccc 365  Q
    ||||||||||||| ||||||||||||||||||||||| |  |||||| ||||| || ||||||||||||| |||||||||||||||||    
T  22469516 cattcagggactgttttgcaatttctctacattcaggaacgaaagtggctactcctttcccattcagggattaaagtgactaattccc 22469429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 276 - 365
Target Start/End: Complemental strand, 23976176 - 23976086
Alignment:
Q  276 tacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttc-tatcccattcagggactaaagtgactaattccc 365  Q
    ||||||||||||||| |||||||||||||| |||||||| | ||||||||||||||| | | ||||||| |||||||||||||||||||||    
T  23976176 tacattcagggactgttttgcaatttctctgcattcaggaactaaagtgactacttctttttccattcaaggactaaagtgactaattccc 23976086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 22326648 - 22326540
Alignment:
Q  157 cactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaattta 256  Q
    ||||||||||| ||||||||||||||||| |||||| ||| ||||| |||| | ||||| |||||||||| |||||||||||| |  ||||| | |||||    
T  22326648 cactttagtccttgaatgcagataaattgtaaaataatccttaaatatagattttgttaatcaatttagtctctgaatgcagatttcgttagcctattta 22326549  T
Q  257 gttcctgaa 265  Q
    |||||||||    
T  22326548 gttcctgaa 22326540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 119 - 223
Target Start/End: Original strand, 25149237 - 25149341
Alignment:
Q  119 gattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtc 218  Q
    ||||||| | |||||||| ||||| | ||| |||| ||||||||| |||||||||||| | ||||||||||| ||||||| ||||||||||||||| |||    
T  25149237 gattagtcattttagtccctgaatggaaaaagagtagtcactttaatccctgaatgcaaagaaattgcaaaacagtccctgaatgtagactctgttggtc 25149336  T
Q  219 aattt 223  Q
    |||||    
T  25149337 aattt 25149341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 120 - 223
Target Start/End: Complemental strand, 21124638 - 21124535
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| |||||||| |||||||  ||||||||| ||||||||| | |||||||| ||| ||||||||||| ||||| | ||||||||||||||| ||||    
T  21124638 attagtcactttagttcttgaatgagaaaggagtagtcactttaattcctgaatgtagagaaattgcaaaacagtccttgaatgtagactctgttggtca 21124539  T
Q  220 attt 223  Q
    ||||    
T  21124538 attt 21124535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 229 - 365
Target Start/End: Original strand, 23625111 - 23625253
Alignment:
Q  229 ctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcagggactgatttgcaatttctctacattcagggattaaag 322  Q
    |||||||||||||||||| ||||||||||| ||||||||||| ||      | |||||||||| | || ||| |||||||||| ||  ||  ||||||||    
T  23625111 ctgaatgcagactctgttggtcaatttagtccctgaaattgatcaacgcagtctacattcaggaagtgttttacaatttctctgcacccaaagattaaag 23625210  T
Q  323 tgactacttctatcccattcagggactaaagtgactaattccc 365  Q
    ||||||||| | ||| |||||| ||||||||||||||||||||    
T  23625211 tgactacttttttcctattcagagactaaagtgactaattccc 23625253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 186 - 265
Target Start/End: Complemental strand, 29585663 - 29585584
Alignment:
Q  186 caaaatagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    ||||||||||||| |||||||||| ||||| ||||||||||  ||||||||||||| |||||||||||||||| ||||||    
T  29585663 caaaatagtccctgaatgtagactttgttattcaatttagtccctgaatgcagactttgttagtcaatttagtccctgaa 29585584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 41358935 - 41358840
Alignment:
Q  146 aaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagact 241  Q
    |||| |||||||  |||| ||| |||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||   ||||||||||||    
T  41358935 aaagaagtcgtccttttaatccatgaatgtagataaattgcaaaatagtccctgaatgtagactctgttaatcaatttagtccatgaatgcagact 41358840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 120 - 223
Target Start/End: Original strand, 22469433 - 22469536
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| |||||| ||| ||||| |||||||||| | |||||| || |||||||| ||| ||||||||||| ||||||| |||| |||||||||| ||||    
T  22469433 attagtcactttaatccctgaatgggaaaggagtagccactttcgttcctgaatgtagagaaattgcaaaacagtccctgaatgcagactctgttggtca 22469532  T
Q  220 attt 223  Q
    ||||    
T  22469533 attt 22469536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 140 - 226
Target Start/End: Original strand, 23625054 - 23625140
Alignment:
Q  140 aataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaatttagt 226  Q
    |||||||||| |||| |||||||||||||||||| || ||| |||| |||||||| ||| |||| |||||||||| |||||||||||    
T  23625054 aataggaaagtagtcatcactttagtccctgaatacaaatagattgtaaaatagtacctgaatgcagactctgttggtcaatttagt 23625140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 223
Target Start/End: Complemental strand, 21185941 - 21185838
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| |||||||||  |||||  |||| |||| ||||||||||||||||||||| || |||||| ||||   ||||||||| ||||||||||| ||||    
T  21185941 attagtcactttagtcgctgaatgagaaatgagtagtcactttagtccctgaatgctgaaaaattgaaaaacgttccctaaatatagactctgttggtca 21185842  T
Q  220 attt 223  Q
    ||||    
T  21185841 attt 21185838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 209 - 351
Target Start/End: Complemental strand, 37494467 - 37494325
Alignment:
Q  209 tctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgaccatatacattcagg-gactgatttgcaatttctctac 307  Q
    ||||||||||||||||||  |||||||||||||   |||||||||| | | ||| |||||||||| | | | ||| | || || ||| |||||||||| |    
T  37494467 tctgttagtcaatttagtccctgaatgcagacttcattagtcaattcactccctaaaattgacca-acagagtcaagagattgttttacaatttctctgc 37494369  T
Q  308 attcagggattaaagtgactacttctatcccattcagggactaa 351  Q
    ||||||||| |||||||||||||| | ||| |||||||||||||    
T  37494368 attcagggactaaagtgactacttatttcctattcagggactaa 37494325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 276 - 366
Target Start/End: Original strand, 12107029 - 12107119
Alignment:
Q  276 tacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccc 366  Q
    |||||||||||| |  |||||||||| ||| |||||| ||| ||||||||| |||||| ||| ||| || |||||||||||||||||||||    
T  12107029 tacattcagggattattttgcaatttatctgcattcaaggactaaagtgacgacttctttcctatttagagactaaagtgactaattcccc 12107119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 118 - 273
Target Start/End: Original strand, 31253933 - 31254089
Alignment:
Q  118 agattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattg-caaaatagtccctaaatgtagactctgttag 216  Q
    |||||||| | |||||||  |||||||||||| |||| |||||||||||| |||||| |||    | | |||  |||||||| |||| ||||||||||||    
T  31253933 agattagtcattttagtctctgaataggaaagaagtcatcactttagtccatgaatgtagactgttagtcaatttagtccctgaatgcagactctgttag 31254032  T
Q  217 tcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca 273  Q
    ||||||||||  || |||| ||| | ||||||||| |||| | ||||||||| ||||    
T  31254033 tcaatttagtccctaaatgtagattttgttagtcactttaatccctgaaattaacca 31254089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 35202843 - 35202775
Alignment:
Q  155 gtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaattt 223  Q
    ||||||||||| |||||||||||| ||||||||||| ||||||| |||||  |||||||| ||||||||    
T  35202843 gtcactttagttcctgaatgcagagaaattgcaaaacagtccctgaatgtttactctgttggtcaattt 35202775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 292 - 362
Target Start/End: Original strand, 37544002 - 37544072
Alignment:
Q  292 tttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaatt 362  Q
    |||||||||| |||||||||||||| |||| || | |||||| ||  ||||||||||||||||||||||||    
T  37544002 tttgcaatttatctacattcagggactaaaatggcgacttctttcatattcagggactaaagtgactaatt 37544072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 18324241 - 18324173
Alignment:
Q  155 gtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaattt 223  Q
    |||| ||||||||||||||||||| ||||||||||| ||||| | ||||| ||||||| | ||||||||    
T  18324241 gtcattttagtccctgaatgcagagaaattgcaaaacagtccatgaatgtcgactctgctggtcaattt 18324173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 190
Target Start/End: Original strand, 37494325 - 37494385
Alignment:
Q  130 ttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaa 190  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||||||| |||||| ||||    
T  37494325 ttagtccctgaataggaaataagtagtcactttagtccctgaatgcagagaaattgtaaaa 37494385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 279 - 362
Target Start/End: Complemental strand, 21184381 - 21184298
Alignment:
Q  279 attcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaatt 362  Q
    |||||||||||  |||||||||| ||| ||||| |||| || |||||| |||  | ||| ||||||||||||||||||||||||    
T  21184381 attcagggactattttgcaatttatctgcattcggggactagagtgacgactcatttcctattcagggactaaagtgactaatt 21184298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 366
Target Start/End: Original strand, 21185887 - 21185946
Alignment:
Q  307 cattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccc 366  Q
    |||||||||| |||||||||||||  | || ||||||| |||||||||||||||||||||    
T  21185887 cattcagggactaaagtgactactcatttctcattcagcgactaaagtgactaattcccc 21185946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 293 - 366
Target Start/End: Original strand, 31250292 - 31250365
Alignment:
Q  293 ttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccc 366  Q
    ||||||||||||| |||| || ||||||||||||| || || | |||||||||  ||||||||| |||||||||    
T  31250292 ttgcaatttctctgcatttagagattaaagtgacttctccttttccattcaggagctaaagtgattaattcccc 31250365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 223
Target Start/End: Original strand, 22326446 - 22326509
Alignment:
Q  160 tttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaattt 223  Q
    ||||||| |||||||| || |||||| |||||||||| | |||||||||||| || ||||||||    
T  22326446 tttagtctctgaatgctgagaaattgtaaaatagtccttgaatgtagactctattggtcaattt 22326509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 276 - 366
Target Start/End: Original strand, 10289392 - 10289481
Alignment:
Q  276 tacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccc 366  Q
    |||||||||| |||| ||| |||||||||| |||| ||| | ||| |||||||||  | | ||||| ||||| ||||||||||||||||||    
T  10289392 tacattcaggaactgttttacaatttctctgcatttaggaactaa-gtgactactcattttccatttagggattaaagtgactaattcccc 10289481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 22426931 - 22426847
Alignment:
Q  276 tacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaat 361  Q
    ||||||||||||||  |||||||||| ||  |||||| ||| ||||||||  |||  | ||| |||||||||||||||||||||||    
T  22426931 tacattcagggactattttgcaatttatcg-cattcatggactaaagtgatgactcgtttcctattcagggactaaagtgactaat 22426847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 321
Target Start/End: Original strand, 41358876 - 41358921
Alignment:
Q  276 tacattcagggactgatttgcaatttctctacattcagggattaaa 321  Q
    ||||||||||||||  |||||||||| |||||||||| ||||||||    
T  41358876 tacattcagggactattttgcaatttatctacattcatggattaaa 41358921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 108; Significance: 6e-54; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 113 - 366
Target Start/End: Complemental strand, 10588157 - 10587882
Alignment:
Q  113 ttgggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctg 212  Q
    ||||||||||||| |||||||||| |||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||| | |||||||||| |     
T  10588157 ttgggagattagtcactttagtccctgaataggaaaggagttgtcacttaagtccatgaatgcagataaattgcaaaatagtccatgaatgtagacttta 10588058  T
Q  213 ttagtcaatttagtttctgaatgcagactctgttagtcaatt----------------tagttcctgaaattgacca------tatacattcagggactg 290  Q
    ||||||||||||||   ||||||||||||| |||||||||||                |||| ||||||||||| ||      | |||||||||||||||    
T  10588057 ttagtcaatttagtccttgaatgcagactccgttagtcaatttagtagttagtcactttagtccctgaaattgaacaacatagtctacattcagggactg 10587958  T
Q  291 atttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccc 366  Q
     |||||||||||||| |||||||||| ||||||||||||| || || |||||| ||||||||||||||||||||||    
T  10587957 ttttgcaatttctctgcattcagggactaaagtgactactcctttctcattcatggactaaagtgactaattcccc 10587882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 115 - 257
Target Start/End: Original strand, 13536555 - 13536697
Alignment:
Q  115 gggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtt 214  Q
    ||||||||||| |||||||||| ||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||    
T  13536555 gggagattagtcactttagtccctgaataggaaaggagccgtcactttaatgcctgaatgcagataaattgcaaaatagtccctgaatgtagactctgtt 13536654  T
Q  215 agtcaatttagtttctgaatgcagactctgttagtcaatttag 257  Q
    ||||||||||||  |||||||||||||| ||||||||||||||    
T  13536655 agtcaatttagtccctgaatgcagactccgttagtcaatttag 13536697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 117 - 265
Target Start/End: Original strand, 25089149 - 25089297
Alignment:
Q  117 gagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttag 216  Q
    ||||||||| |||||||||| ||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25089149 gagattagtcactttagtccatgaataggagaggagtcgccactttagtctctgaatgcagataaattgcaaaatagtccctgaatgtagactctgttag 25089248  T
Q  217 tcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    ||||||||||   |||||||||||||  |||||||||||||| ||||||    
T  25089249 tcaatttagtcattgaatgcagactccattagtcaatttagtccctgaa 25089297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 113 - 265
Target Start/End: Complemental strand, 19295567 - 19295415
Alignment:
Q  113 ttgggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctg 212  Q
    ||||||||||||| |||||||||  ||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||    
T  19295567 ttgggagattagtcactttagtctctgaatagaaaaggagtcgttactttagtccctgaatgcagataaattacaaaatagtccctgaatgcagactctg 19295468  T
Q  213 ttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    ||||||||||||||  |||||||||||||   |||||||||||||| ||||||    
T  19295467 ttagtcaatttagtccctgaatgcagacttcattagtcaatttagtccctgaa 19295415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 191 - 366
Target Start/End: Original strand, 26705131 - 26705312
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcag 284  Q
    |||||||| ||| |||| || |||||||||||||||  ||||||| |||  | |||||||| |||||| ||||||||||||||      | |||||||||    
T  26705131 tagtccctgaatatagaatccgttagtcaatttagtccctgaatgtagaacccgttagtcactttagtccctgaaattgaccaacaacgtctacattcag 26705230  T
Q  285 ggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccc 366  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||  | | ||||||||| ||||||||||||||||||||    
T  26705231 ggactgttttgcaatttctctacattcagggactaaagtgactactctttttccattcaggaactaaagtgactaattcccc 26705312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 113 - 265
Target Start/End: Original strand, 10862006 - 10862158
Alignment:
Q  113 ttgggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctg 212  Q
    ||||||||||||| | |||||||  |||||   ||||||||||||||||||||||||||||||| || ||||||||  |||||||| |||||||||||||    
T  10862006 ttgggagattagtcattttagtctctgaatgtaaaaggagtcgtcactttagtccctgaatgcaaattaattgcaatgtagtccctgaatgtagactctg 10862105  T
Q  213 ttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    |||||||||| | |  ||||| |||||||| ||||||||||||||| ||||||    
T  10862106 ttagtcaattcaatccctgaaggcagactccgttagtcaatttagtccctgaa 10862158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 120 - 265
Target Start/End: Complemental strand, 21222746 - 21222599
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgca--gataaattgcaaaatagtccctaaatgtagactctgttagt 217  Q
    |||||| ||||| |||| |||||||||||| | |||||||||||||||||||||| |  ||||||||||||||||||| || |||||| ||| |||||||    
T  21222746 attagtcactttggtccctgaataggaaagaaatcgtcactttagtccctgaatgtatagataaattgcaaaatagtctctgaatgtatactatgttagt 21222647  T
Q  218 caatttagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    ||| ||||| ||||||||||||||  ||||||||||||||| ||||||    
T  21222646 caacttagtctctgaatgcagacttcgttagtcaatttagtccctgaa 21222599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 191 - 368
Target Start/End: Original strand, 13536663 - 13536847
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttc-tgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattca 283  Q
    |||||||| |||| |||||| ||||||||||||||   | |||||| ||||||||||||||| |||||| |||||||| |||||      | ||||||||    
T  13536663 tagtccctgaatgcagactccgttagtcaatttagccccctgaatgtagactctgttagtcactttagtccctgaaatggaccaatagagtctacattca 13536762  T
Q  284 gggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccctt 368  Q
    ||||||| ||||||||||||||  |||||| || ||||||||||||| || || |||||| ||||||||||||||||||||||||    
T  13536763 gggactgttttgcaatttctctgtattcagagactaaagtgactactcctttctcattcaaggactaaagtgactaattcccctt 13536847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 115 - 247
Target Start/End: Original strand, 28752237 - 28752369
Alignment:
Q  115 gggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtt 214  Q
    ||||||||||| ||||||||||||||| | ||||| ||  ||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||    
T  28752237 gggagattagtcactttagtccttgaacaagaaagaagatgtcactttagtacctgaatgcagataaattgcaaaatagtccatgaatgtagactctgtt 28752336  T
Q  215 agtcaatttagtttctgaatgcagactctgtta 247  Q
    | |  |||||||||| |||| || |||||||||    
T  28752337 aatatatttagtttccgaatacaaactctgtta 28752369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 120 - 223
Target Start/End: Original strand, 19295281 - 19295384
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||| ||||||||||| ||| || |||||||||    
T  19295281 attagtcactttagtccttgaataggaaaggagtagtcactttagtccctgaatgctgagaaattgcaaaacagtccctaaatataggctatgttagtca 19295380  T
Q  220 attt 223  Q
    ||||    
T  19295381 attt 19295384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 191 - 367
Target Start/End: Complemental strand, 19295457 - 19295275
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgac---cata---tacattcag 284  Q
    |||||||| |||| |||||   ||||||||||||||  ||||||| |||||| ||| |||| |||||| ||||||||||||   ||||   || ||| ||    
T  19295457 tagtccctgaatgcagacttcattagtcaatttagtccctgaatgtagactccgttggtcactttagtccctgaaattgactaacatagcctatatttag 19295358  T
Q  285 ggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccct 367  Q
    |||||| |||||||||||||  |||||||||| ||||||||||||| || ||| ||||| |||||||||||||||||||||||    
T  19295357 ggactgttttgcaatttctcagcattcagggactaaagtgactactcctttcctattcaaggactaaagtgactaattcccct 19295275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 120 - 223
Target Start/End: Original strand, 10587887 - 10587990
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| |||||||||| |||||  ||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| |||||||||| ||||  |||    
T  10587887 attagtcactttagtccatgaatgagaaaggagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagactatgttgttca 10587986  T
Q  220 attt 223  Q
    ||||    
T  10587987 attt 10587990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 120 - 211
Target Start/End: Complemental strand, 13536840 - 13536749
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactct 211  Q
    |||||| ||||||||||||||||  ||||||||| |||||||||||| |||||| |||| ||||||||||| ||||||| ||||||||||||    
T  13536840 attagtcactttagtccttgaatgagaaaggagtagtcactttagtctctgaatacagagaaattgcaaaacagtccctgaatgtagactct 13536749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 138 - 265
Target Start/End: Complemental strand, 10672878 - 10672752
Alignment:
Q  138 tgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaatttagtttctgaatgca 237  Q
    ||||||||||| ||||  | | |||||||  |||||||||||||||||||||||||| ||| |||||||| | ||||| |||||||||| ||||||||||    
T  10672878 tgaataggaaatgagttattattttagtctttgaatgcagataaattgcaaaatagttcctgaatgtaga-tttgttaatcaatttagtctctgaatgca 10672780  T
Q  238 gactctgttagtcaatttagttcctgaa 265  Q
     | |  ||||||||||||||| ||||||    
T  10672779 tatttcgttagtcaatttagtccctgaa 10672752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 200 - 366
Target Start/End: Original strand, 25089264 - 25089436
Alignment:
Q  200 aatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcagggactgatt 293  Q
    |||| ||||||  ||||||||||||||  ||||||| |||||   ||||||| |||||| | ||||||||||||      | || ||||||| |||| ||    
T  25089264 aatgcagactccattagtcaatttagtccctgaatgtagacttcattagtcactttagtccatgaaattgaccaacatagtctatattcaggaactgttt 25089363  T
Q  294 tgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccc 366  Q
    |||||||||||| ||||||| || ||||||||||| |  |   ||||||||||||||||||||||||||||||    
T  25089364 tgcaatttctctgcattcagtgactaaagtgactattcattgtccattcagggactaaagtgactaattcccc 25089436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 205 - 328
Target Start/End: Original strand, 10862130 - 10862258
Alignment:
Q  205 agactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca-----tatacattcagggactgatttgcaat 299  Q
    |||||| |||||||||||||||  ||||||  |||||||||| |||| |||||| ||||||||||||||     | |||||||||  |||| ||||||||    
T  10862130 agactccgttagtcaatttagtccctgaatatagactctgttcgtcactttagtccctgaaattgaccaataagtctacattcagctactgttttgcaat 10862229  T
Q  300 ttctctacattcagggattaaagtgacta 328  Q
    |||||| |||||||||| |||||| ||||    
T  10862230 ttctctgcattcagggactaaagtaacta 10862258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 138 - 258
Target Start/End: Complemental strand, 12651343 - 12651223
Alignment:
Q  138 tgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaatttagtttctgaatgca 237  Q
    ||||| ||||| || || |||||||| ||  |||||||||||||||||| ||||| ||  | ||| ||||||| |||||||||||| ||  ||||||||     
T  12651343 tgaatgggaaatgaatcatcactttaatctgtgaatgcagataaattgctaaataatctttgaatatagactccgttagtcaatttggtccctgaatgcc 12651244  T
Q  238 gactctgttagtcaatttagt 258  Q
    |||||||||||||||||||||    
T  12651243 gactctgttagtcaatttagt 12651223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 120 - 223
Target Start/End: Original strand, 21222465 - 21222568
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| |||||||| | |||||  |||| |||| ||||||| ||||| |||||||||| ||||||||||| ||||| | || |||||||||||||||||    
T  21222465 attagtaactttagttcctgaatgagaaaagagtagtcacttaagtccttgaatgcagagaaattgcaaaacagtccttgaacgtagactctgttagtca 21222564  T
Q  220 attt 223  Q
    ||||    
T  21222565 attt 21222568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 120 - 223
Target Start/End: Complemental strand, 26705307 - 26705204
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| |||||||| | ||||| | ||| |||| |||||||||||||||||||| ||| ||||||||||| ||||||| |||||||||  |||| ||||    
T  26705307 attagtcactttagttcctgaatggaaaaagagtagtcactttagtccctgaatgtagagaaattgcaaaacagtccctgaatgtagacgttgttggtca 26705208  T
Q  220 attt 223  Q
    ||||    
T  26705207 attt 26705204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 276 - 370
Target Start/End: Complemental strand, 13536645 - 13536551
Alignment:
Q  276 tacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattccccttta 370  Q
    ||||||||||||||  |||||||||| ||| |||||||| |||||||||||  || || ||| |||||||||||||||||||||||  |||||||    
T  13536645 tacattcagggactattttgcaatttatctgcattcaggcattaaagtgacggctcctttcctattcagggactaaagtgactaatctcccttta 13536551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 191 - 366
Target Start/End: Complemental strand, 21222641 - 21222460
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcag 284  Q
    ||||| || |||| |||||  |||||||||||||||  ||||||| |||||| ||||||||  ||| | | |||||||||| |      | ||| ||||     
T  21222641 tagtctctgaatgcagacttcgttagtcaatttagtccctgaatgtagactcagttagtcacattaatccttgaaattgactaacagagtctacgttcaa 21222542  T
Q  285 ggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccc 366  Q
    |||||| |||||||||||||| |||||| ||| | |||||||||||  | || |||||||| |||||||| |||||||||||    
T  21222541 ggactgttttgcaatttctctgcattcaaggacttaagtgactactcttttctcattcaggaactaaagttactaattcccc 21222460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 274 - 362
Target Start/End: Original strand, 21222657 - 21222747
Alignment:
Q  274 tatacattcagggactgatttgcaatttctcta--cattcagggattaaagtgactacttctatcccattcagggactaaagtgactaatt 362  Q
    ||||||||||| ||||  |||||||||| ||||  |||||||||| ||||||||| | |||| ||| |||||||||| |||||||||||||    
T  21222657 tatacattcagagactattttgcaatttatctatacattcagggactaaagtgacgatttctttcctattcagggaccaaagtgactaatt 21222747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 120 - 223
Target Start/End: Complemental strand, 25089431 - 25089328
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| |||||||||| ||||| |  || || | |||||||||||| ||||||||||| ||||||||||| ||| ||| ||| |||||| |||| ||||    
T  25089431 attagtcactttagtccctgaatggacaatgaatagtcactttagtcactgaatgcagagaaattgcaaaacagttcctgaatatagactatgttggtca 25089332  T
Q  220 attt 223  Q
    ||||    
T  25089331 attt 25089328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 10588065 - 10588150
Alignment:
Q  276 tacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaat 361  Q
    |||||||| |||||  |||||||||| ||| |||||| ||| | ||||||| ||| || ||| |||||||||||||||||||||||    
T  10588065 tacattcatggactattttgcaatttatctgcattcatggacttaagtgacaactcctttcctattcagggactaaagtgactaat 10588150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 25089237 - 25089152
Alignment:
Q  276 tacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaat 361  Q
    ||||||||||||||  |||||||||| ||| ||||||| || ||||||| | ||| || ||| ||||| |||||||||||||||||    
T  25089237 tacattcagggactattttgcaatttatctgcattcagagactaaagtggcgactcctctcctattcatggactaaagtgactaat 25089152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 10862253 - 10862202
Alignment:
Q  158 actttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagact 209  Q
    ||||||||||||||||||||| ||||||||||| |||  || ||||||||||    
T  10862253 actttagtccctgaatgcagagaaattgcaaaacagtagctgaatgtagact 10862202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 278 - 361
Target Start/End: Original strand, 19295477 - 19295560
Alignment:
Q  278 cattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaat 361  Q
    ||||||||||||  |||| ||||| ||| |||||||||| |||||| || ||| || | | |||||| ||||||||||||||||    
T  19295477 cattcagggactattttgtaatttatctgcattcagggactaaagtaacgactccttttctattcagagactaaagtgactaat 19295560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 10672773 - 10672712
Alignment:
Q  212 gttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca 273  Q
    |||||||||||||||  ||||||| |||||  |||||||| | |||||||||||||| ||||    
T  10672773 gttagtcaatttagtccctgaatgtagacttcgttagtcactatagttcctgaaatttacca 10672712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 258
Target Start/End: Complemental strand, 12651256 - 12651192
Alignment:
Q  193 gtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagt 258  Q
    |||||| ||||  ||||||||||||||||||||| |||| ||| ||||| ||||||||| ||||||    
T  12651256 gtccctgaatgccgactctgttagtcaatttagtctctg-atgtagactttgttagtcactttagt 12651192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 28752327 - 28752242
Alignment:
Q  276 tacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaat 361  Q
    |||||||| |||||  |||||||||| ||| |||||||| | |||||||||  ||||| ||   |||| |||||||||||||||||    
T  28752327 tacattcatggactattttgcaatttatctgcattcaggtactaaagtgacatcttctttcttgttcaaggactaaagtgactaat 28752242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 229 - 265
Target Start/End: Original strand, 13536637 - 13536673
Alignment:
Q  229 ctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  13536637 ctgaatgtagactctgttagtcaatttagtccctgaa 13536673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 4e-52; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 113 - 265
Target Start/End: Original strand, 50335434 - 50335586
Alignment:
Q  113 ttgggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctg 212  Q
    ||||||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||    
T  50335434 ttgggagattagtcactttaatccctgaataggaaatgagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccatgaatgtagactttg 50335533  T
Q  213 ttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    ||||||||||||||  |||||||||||||| ||| ||||||||||| ||||||    
T  50335534 ttagtcaatttagtccctgaatgcagactccgttcgtcaatttagtccctgaa 50335586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 140 - 258
Target Start/End: Original strand, 13735465 - 13735583
Alignment:
Q  140 aataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaatttagtttctgaatgcaga 239  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||| ||||||||||||    
T  13735465 aataggaaagaagtcgtcactttagtccctgaatgcagataaattacaaaatagtcccacaatgtagactctgttagtcaatttagtctctgaatgcaga 13735564  T
Q  240 ctctgttagtcaatttagt 258  Q
    ||| |||||||||||||||    
T  13735565 ctccgttagtcaatttagt 13735583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 114 - 258
Target Start/End: Original strand, 37607967 - 37608110
Alignment:
Q  114 tgggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgt 213  Q
    |||||||||||| |||| ||||| ||||||||||| || | |||| ||||||||||||||||| ||||||||||||||||||| | ||||||||||||||    
T  37607967 tgggagattagtaactt-agtccctgaataggaaatgaattgtcattttagtccctgaatgcatataaattgcaaaatagtccttgaatgtagactctgt 37608065  T
Q  214 tagtcaatttagtttctgaatgcagactctgttagtcaatttagt 258  Q
    |||||||||||||   |||||||||||||||||||||||||||||    
T  37608066 tagtcaatttagtccttgaatgcagactctgttagtcaatttagt 37608110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 191 - 365
Target Start/End: Original strand, 37608075 - 37608254
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca-----tatacattcagg 285  Q
    |||||| | |||| ||||||||||||||||||||||   |||||| |||||| |||||||| ||| || ||||||||||||||     | ||||||||||    
T  37608075 tagtccttgaatgcagactctgttagtcaatttagtccttgaatgtagactccgttagtcactttggtccctgaaattgaccaacagttttacattcagg 37608174  T
Q  286 gactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattccc 365  Q
    ||||| |||||||||||||| |||||||||| |||| |||||||| || ||||||||| |||||||||||||||| ||||    
T  37608175 gactgttttgcaatttctctgcattcagggactaaaatgactactcctttcccattcaaggactaaagtgactaactccc 37608254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 191 - 369
Target Start/End: Original strand, 50335544 - 50335728
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcag 284  Q
    |||||||| |||| |||||| ||| |||||||||||  ||||||| |||||| | || ||| |||||| ||| ||||||||||      | |||||||||    
T  50335544 tagtccctgaatgcagactccgttcgtcaatttagtccctgaatgtagactccgctaatcactttagtccctaaaattgaccaacagagtctacattcag 50335643  T
Q  285 ggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattccccttt 369  Q
    |||||| |||||||||| ||| ||||||||||||||||||||||||| | | |||||| ||||||||||||||||||||||||||    
T  50335644 ggactgttttgcaatttgtctgcattcagggattaaagtgactactttttttccattctgggactaaagtgactaattccccttt 50335728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 127 - 265
Target Start/End: Complemental strand, 8097987 - 8097849
Alignment:
Q  127 actttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaatttagt 226  Q
    |||||||||| | ||||||||| ||||  ||||||||||||||||||||||||||||  ||||||||||| | ||| |||| ||||||||||||||||||    
T  8097987 actttagtccctaaataggaaatgagttttcactttagtccctgaatgcagataaatcacaaaatagtccatgaatatagattctgttagtcaatttagt 8097888  T
Q  227 ttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
       ||||| || ||||  |||||||||||||||||||||    
T  8097887 ccttgaatacatactccattagtcaatttagttcctgaa 8097849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 37608249 - 37608165
Alignment:
Q  121 ttagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgta 205  Q
    ||||| |||||||||||||||| |||||||||| |||| ||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  37608249 ttagtcactttagtccttgaatgggaaaggagtagtcattttagtccctgaatgcagagaaattgcaaaacagtccctgaatgta 37608165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 117 - 258
Target Start/End: Original strand, 42847022 - 42847164
Alignment:
Q  117 gagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtaga--ctctgtt 214  Q
    ||||||||| ||||||||||||||||| ||||| |||| ||| |||||||| | ||||||||||||||| |||||| ||  | ||||||||   | || |    
T  42847022 gagattagtcactttagtccttgaataagaaagaagtcctcattttagtccataaatgcagataaattgaaaaataatctttgaatgtagattatatgat 42847121  T
Q  215 agtcaatttagtttctgaatgcagactctgttagtcaatttagt 258  Q
    |||||||||||| |||||||||| |||| |||||||||||||||    
T  42847122 agtcaatttagtatctgaatgcaaactc-gttagtcaatttagt 42847164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 115 - 226
Target Start/End: Original strand, 11633189 - 11633300
Alignment:
Q  115 gggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtt 214  Q
    ||||||||||| |||||| ||| |||||||||||| |||||||||||| || | |||| |||||||||||| |||||||| | | |||||||| | ||||    
T  11633189 gggagattagtcactttaatccatgaataggaaagaagtcgtcactttggttcttgaaagcagataaattgtaaaatagttcatgaatgtagattatgtt 11633288  T
Q  215 agtcaatttagt 226  Q
    ||||| ||||||    
T  11633289 agtcactttagt 11633300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 120 - 223
Target Start/End: Complemental strand, 50335720 - 50335617
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| ||||||||||  |||| | |||  ||| ||||||||| |||||||||||||| ||||||||||| ||||||| ||||||||||||||| ||||    
T  50335720 attagtcactttagtcccagaatggaaaaaaagtagtcactttaatccctgaatgcagacaaattgcaaaacagtccctgaatgtagactctgttggtca 50335621  T
Q  220 attt 223  Q
    ||||    
T  50335620 attt 50335617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 276 - 365
Target Start/End: Original strand, 42847212 - 42847301
Alignment:
Q  276 tacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattccc 365  Q
    |||||||| ||| || |||||||||||||| |||||||||| |||||||||||||| | ||| || ||| ||||||||||||||||||||    
T  42847212 tacattcaaggattgttttgcaatttctctgcattcagggaataaagtgactacttttttcctatccagagactaaagtgactaattccc 42847301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 191 - 369
Target Start/End: Original strand, 13735548 - 13735731
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgaccata-------tacattca 283  Q
    ||||| || |||| |||||| |||||||||||||||   | |||| |||||| |||||||| |||||| ||||||||||| || |       ||||||||    
T  13735548 tagtctctgaatgcagactccgttagtcaatttagtcaataaatgtagactccgttagtcactttagtccctgaaattgatcaaacagagtctacattca 13735647  T
Q  284 gggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattccccttt 369  Q
    ||||||| |||||||||||| | ||||||| || |||| |||||||| || ||||||| |  |||||||||||||||| |||||||    
T  13735648 gggactgttttgcaatttctttgcattcagagactaaa-tgactactcctttcccattta-tgactaaagtgactaataccccttt 13735731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 155 - 366
Target Start/End: Complemental strand, 32374203 - 32373981
Alignment:
Q  155 gtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatt 254  Q
    ||||||||||||||| |||||| ||||||||||||||||||| | ||||||       ||||||||||||||  ||||||||| ||||||||||||||||    
T  32374203 gtcactttagtccctaaatgcaaataaattgcaaaatagtccatgaatgta-------ttagtcaatttagtccctgaatgcaaactctgttagtcaatt 32374111  T
Q  255 tagttcctgaa-------------attgacca------tatacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctat 335  Q
    |||| ||||||             |||||| |      | |||||||| | |||| ||||||| |||| | ||| |||||| ||||||||||||| || |    
T  32374110 tagtccctgaatgtagactatgaaattgactaacacagtctacattcaagaactgttttgcaaattctatgcatccagggactaaagtgactact-cttt 32374012  T
Q  336 cccattcagggactaaagtgactaattcccc 366  Q
    || |||||||||||||| |||||||||||||    
T  32374011 cctattcagggactaaaatgactaattcccc 32373981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 213 - 362
Target Start/End: Complemental strand, 8097869 - 8097714
Alignment:
Q  213 ttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcagggactgatttgcaatttctcta 306  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||| | | ||||||||||      | || ||| || ||||| ||||||||||||||     
T  8097869 ttagtcaatttagttcctgaatgtagactctgttagtcattttagtccttaaaattgaccaacatagtctatatttagagactgttttgcaatttctctg 8097770  T
Q  307 cattcagggattaaagtgactacttctatcccattcagggactaaagtgactaatt 362  Q
    |||| ||  | ||||||| |||||  | || ||||||| |||||||||||||||||    
T  8097769 catttagaaactaaagtggctactaatttctcattcagagactaaagtgactaatt 8097714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 223
Target Start/End: Original strand, 32373986 - 32374088
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| | |||||||| |||||||||||| ||| |||||||||||||||| ||||| | || |||||||| ||| | | |||||||||| |||||||||    
T  32373986 attagtcattttagtccctgaataggaaag-agtagtcactttagtccctggatgcatagaatttgcaaaacagttcttgaatgtagactgtgttagtca 32374084  T
Q  220 attt 223  Q
    ||||    
T  32374085 attt 32374088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 219
Target Start/End: Complemental strand, 42847297 - 42847198
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| |||||||||  || ||||||||  ||| ||||||||| |||||||||||||| ||||||||||| | ||| | |||||||||| |||||||||    
T  42847297 attagtcactttagtctctggataggaaaaaagtagtcactttattccctgaatgcagagaaattgcaaaacaatccttgaatgtagactttgttagtca 42847198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 13735700 - 13735631
Alignment:
Q  144 ggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtt 214  Q
    |||||||||| |||| ||||||| ||||||||| | ||||||||||| ||||||| |||||||||||||||    
T  13735700 ggaaaggagtagtca-tttagtctctgaatgcaaagaaattgcaaaacagtccctgaatgtagactctgtt 13735631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 50335526 - 50335441
Alignment:
Q  276 tacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaat 361  Q
    |||||||| |||||  |||||||||| ||| |||||||||| ||||||||| |||  | ||| ||||||||| |||||||||||||    
T  50335526 tacattcatggactattttgcaatttatctgcattcagggactaaagtgacgactcatttcctattcagggattaaagtgactaat 50335441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 223
Target Start/End: Original strand, 8097715 - 8097818
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| |||||||||  |||||  ||||  ||| | |||||||||  || |||||||| ||||||||||| |||| |||||| |||||| |||| ||||    
T  8097715 attagtcactttagtctctgaatgagaaattagtagccactttagtttctaaatgcagagaaattgcaaaacagtctctaaatatagactatgttggtca 8097814  T
Q  220 attt 223  Q
    ||||    
T  8097815 attt 8097818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 223
Target Start/End: Complemental strand, 11633401 - 11633306
Alignment:
Q  128 ctttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaattt 223  Q
    |||| |||| ||||| | ||| |||| |||| |||||| |||||||| ||| |||||| | || |||||||||||| ||||||| || ||||||||    
T  11633401 cttttgtccctgaatggaaaatgagtagtcattttagttcctgaatgtagagaaattgtataacagtccctaaatgcagactctattggtcaattt 11633306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 13735417 - 13735465
Alignment:
Q  115 gggagattagtgactttagtccttgaataggaaaggagtcgtcacttta 163  Q
    ||||||||||| |||||||||| | |||||||||||||  |||||||||    
T  13735417 gggagattagtcactttagtcccttaataggaaaggagcagtcacttta 13735465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 4e-49; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 122 - 265
Target Start/End: Complemental strand, 10760284 - 10760141
Alignment:
Q  122 tagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaat 221  Q
    |||| |||||| ||| ||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  10760284 tagtcactttaatccctgaataggaaatgagccgtcactttagtctctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtaagtcaat 10760185  T
Q  222 ttagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    |||||  |||||||||||||| ||||||||||||||| ||||||    
T  10760184 ttagtccctgaatgcagactccgttagtcaatttagtccctgaa 10760141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 115 - 266
Target Start/End: Complemental strand, 13753513 - 13753362
Alignment:
Q  115 gggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtt 214  Q
    ||||||||||| |||||||||| | |||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  13753513 gggagattagtcactttagtccctaaataggaaagaagtcgtcattttagtctctgaatgcagataaattgcaaaatagtccctaaatgtagactctgta 13753414  T
Q  215 agtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaa 266  Q
    ||||||||||||   | ||||||||||| ||||||||||||||  |||||||    
T  13753413 agtcaatttagtccttaaatgcagactccgttagtcaatttagcccctgaaa 13753362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 140 - 373
Target Start/End: Complemental strand, 21211658 - 21211405
Alignment:
Q  140 aataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtcccta---------------aatgtagactctgttagtcaattta 224  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||                |||| ||| || |||||| ||||||    
T  21211658 aataggaaaggggtggtcactttagtccctgaatgcagataaattgcaaaatagtctctgttaatttagttcatgaatgcaga-tccgttagttaattta 21211560  T
Q  225 gtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcagggactgatttgcaatttctctacattcagggatt 318  Q
    || |||||||| ||| |  |||||||| |||||||||||||||||||||      | ||||||||| ||||| |||||||||| ||| |||||||||| |    
T  21211559 gtctctgaatgtagattgcgttagtcactttagttcctgaaattgaccaacaaagtctacattcagagactgttttgcaatttttctgcattcagggact 21211460  T
Q  319 aaagtgactacttctatcccattcagggactaaagtgactaattcccctttaata 373  Q
    ||||||||||||  | ||||||||||||||||||||||||| || ||||| ||||    
T  21211459 aaagtgactactcatttcccattcagggactaaagtgactagttacccttaaata 21211405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 117 - 265
Target Start/End: Original strand, 2555436 - 2555584
Alignment:
Q  117 gagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttag 216  Q
    ||||||||| ||||||| |  ||| ||||||| ||||||| |||||||||||||||| || ||| |||||||||||||| || |||||||||||||||||    
T  2555436 gagattagtcactttagcctctgagtaggaaatgagtcgtaactttagtccctgaatacaaatatattgcaaaatagtctctgaatgtagactctgttag 2555535  T
Q  217 tcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    ||||||||||   ||||||||||||  ||||||||| ||||| ||||||    
T  2555536 tcaatttagtcgttgaatgcagacttcgttagtcaaattagtccctgaa 2555584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 112 - 258
Target Start/End: Complemental strand, 21944030 - 21943884
Alignment:
Q  112 gttgggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactct 211  Q
    |||||| ||||| | |||||||||| ||||||| ||| || |||||| |||||||  |||||||| ||||||||||||||||| | | ||||||||||||    
T  21944030 gttgggtgattaatcactttagtccctgaatagaaaatgaatcgtcattttagtcattgaatgcaaataaattgcaaaatagttcatgaatgtagactct 21943931  T
Q  212 gttagtcaatttagtttctgaatgcagactctgttagtcaatttagt 258  Q
    |||| ||||||||||  ||||||||| ||| ||||||||||||||||    
T  21943930 gttaatcaatttagtccctgaatgcatactttgttagtcaatttagt 21943884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 114 - 258
Target Start/End: Original strand, 30852580 - 30852717
Alignment:
Q  114 tgggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgt 213  Q
    |||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||| |||||       |||||||| ||| |||||| |||||||    
T  30852580 tgggagattagtcactttagtccttgaataggaaataagtcgtcactttagtccctgaatacagat-------aaaatagttcctgaatgtaaactctgt 30852672  T
Q  214 tagtcaatttagtttctgaatgcagactctgttagtcaatttagt 258  Q
    |||||||||||||  |||||||||||||  || ||||||||||||    
T  30852673 tagtcaatttagtccctgaatgcagacttcgtaagtcaatttagt 30852717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 155 - 265
Target Start/End: Original strand, 11297993 - 11298104
Alignment:
Q  155 gtcactttagtccctgaatgca-gataaattgcaaaatagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaat 253  Q
    ||||||||||| |||||||| | |||||||||||||||| ||||| ||  ||||||||||||||||||||||| |||||||||||||||  |||||||||    
T  11297993 gtcactttagttcctgaatgtaagataaattgcaaaataatccctgaacatagactctgttagtcaatttagtctctgaatgcagactccattagtcaat 11298092  T
Q  254 ttagttcctgaa 265  Q
    ||||||||||||    
T  11298093 ttagttcctgaa 11298104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 191 - 368
Target Start/End: Complemental strand, 10760183 - 10760001
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcag 284  Q
    |||||||| |||| |||||| |||||||||||||||  ||||||| |||||| |||| ||| |||||| | ||||||||||||      | |||||||||    
T  10760183 tagtccctgaatgcagactccgttagtcaatttagtccctgaatgtagactccgttaatca-tttagtccttgaaattgaccaacaaagtttacattcag 10760085  T
Q  285 ggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccctt 368  Q
    |||||| ||| ||||||||||||||||||| | ||||||| |||||  | | ||| |||||||| |||||||||||||||||||    
T  10760084 ggactgtttttcaatttctctacattcaggaactaaagtggctactcattttccactcagggaccaaagtgactaattcccctt 10760001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 191 - 366
Target Start/End: Complemental strand, 30100787 - 30100609
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgaccata---tacattcaggga 287  Q
    |||||||| |||| ||||||  ||||||||| ||||  ||||||| |||||||||| |||| |||||| |||||||||||  | |   |||||||| |||    
T  30100787 tagtccctgaatgcagactccattagtcaatatagtccctgaatgtagactctgtttgtcactttagtccctgaaattgaataaagtctacattcaagga 30100688  T
Q  288 ctgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccc 366  Q
     || |||||||||||||| |||| |||||||||||||||||||  | || || | ||||||||||||||||||||||||    
T  30100687 ttgttttgcaatttctctgcatttagggattaaagtgactactcttttctcacttagggactaaagtgactaattcccc 30100609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 129 - 258
Target Start/End: Original strand, 34419489 - 34419618
Alignment:
Q  129 tttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaatttagttt 228  Q
    |||||||  ||||||| |||||||||||||||||| || | ||||||||||||||||||||||||||||| ||||||   ||||||||||||||||||      
T  34419489 tttagtctctgaatagaaaaggagtcgtcactttaatctcagaatgcagataaattgcaaaatagtccctgaatgtaagttctgttagtcaatttagtcg 34419588  T
Q  229 ctgaatgcagactctgttagtcaatttagt 258  Q
     | || |||||||  |||||||||||||||    
T  34419589 ataaaagcagacttcgttagtcaatttagt 34419618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 121 - 265
Target Start/End: Original strand, 19491673 - 19491817
Alignment:
Q  121 ttagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaa 220  Q
    ||||| ||||| |||| |||||||||||| | |  |||||||||||  ||||||||||||||||||||||||||   | |||||| ||| ||||||||||    
T  19491673 ttagtcactttggtccctgaataggaaagaaattatcactttagtctatgaatgcagataaattgcaaaatagtttatgaatgtatactatgttagtcaa 19491772  T
Q  221 tttagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
     ||||| ||||||||||||||  |||| |||||||||| ||||||    
T  19491773 cttagtatctgaatgcagacttcgttaatcaatttagtccctgaa 19491817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 113 - 265
Target Start/End: Complemental strand, 30100897 - 30100745
Alignment:
Q  113 ttgggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctg 212  Q
    |||| |||||||| | |||||||||||||||| |||  ||| || | |||||  |||||||| ||||||||||||||||||||| | |||| ||||||||    
T  30100897 ttggaagattagtcattttagtccttgaatagaaaataagttgtaattttaggtcctgaatgtagataaattgcaaaatagtccatgaatgcagactctg 30100798  T
Q  213 ttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    ||| ||| ||||||  ||||||||||||||  ||||||||| |||| ||||||    
T  30100797 ttaatcactttagtccctgaatgcagactccattagtcaatatagtccctgaa 30100745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 120 - 223
Target Start/End: Original strand, 21943743 - 21943846
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| |||||||||||||||| ||||| |||| ||||||||||| |||||||||||| ||||||||||| || || | |||||||||| |||||||||    
T  21943743 attagtcactttagtccttgaatgggaaatgagtagtcactttagtacctgaatgcagagaaattgcaaaacagaccttgaatgtagactttgttagtca 21943842  T
Q  220 attt 223  Q
    ||||    
T  21943843 attt 21943846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 200 - 366
Target Start/End: Complemental strand, 20430044 - 20429872
Alignment:
Q  200 aatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcagggactgatt 293  Q
    |||| ||||||||||||| |||||||||| |||||| | |||||||| |||| |||||| | ||||||||||||      | ||||||||  ||||| ||    
T  20430044 aatgcagactctgttagttaatttagtttttgaatgtaaactctgttcgtcactttagtccttgaaattgaccaacagagtctacattcaaagactgttt 20429945  T
Q  294 tgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccc 366  Q
    |||||||||||| ||| ||| |  ||||| ||||||| || || ||||||||||||||||||||||| |||||    
T  20429944 tgcaatttctctgcatccagaggctaaagcgactactcctttcacattcagggactaaagtgactaactcccc 20429872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 122 - 223
Target Start/End: Original strand, 21211419 - 21211520
Alignment:
Q  122 tagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaat 221  Q
    |||| |||||||||| ||||| ||||| |||| |||||||||||||||||||||||| ||||||||||| |||| || |||||||||| |||| ||||||    
T  21211419 tagtcactttagtccctgaatgggaaatgagtagtcactttagtccctgaatgcagaaaaattgcaaaacagtctctgaatgtagactttgttggtcaat 21211518  T
Q  222 tt 223  Q
    ||    
T  21211519 tt 21211520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 191 - 364
Target Start/End: Original strand, 17497098 - 17497277
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcag 284  Q
    |||||| | |||| ||| ||||||||| ||||||||  ||||||| |||||| ||  |||| |||||| ||||||||||||||      | |||||||||    
T  17497098 tagtccttgaatgcagattctgttagttaatttagtccctgaatgtagactccgtcggtcactttagtccctgaaattgaccaacaaagtctacattcag 17497197  T
Q  285 ggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcc 364  Q
    |||||  |||||||||||||| |||||||||| |||| ||||||||  | || |||||| |||||||||||||| |||||    
T  17497198 ggactattttgcaatttctctgcattcagggactaaaatgactactcatttctcattcacggactaaagtgactcattcc 17497277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 127 - 223
Target Start/End: Complemental strand, 17497267 - 17497171
Alignment:
Q  127 actttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaattt 223  Q
    |||||||||| |||||  |||| |||| |||| ||||||||||||||||||| ||||||||||||||||||| |||||||||| |||| ||||||||    
T  17497267 actttagtccgtgaatgagaaatgagtagtcattttagtccctgaatgcagagaaattgcaaaatagtccctgaatgtagactttgttggtcaattt 17497171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 191 - 363
Target Start/End: Complemental strand, 21943919 - 21943741
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcag 284  Q
    |||||||| |||| | ||| |||||||||||||||| | |||||| ||| | ||||| ||| |||||| ||| |||||||| |      | ||||||||     
T  21943919 tagtccctgaatgcatactttgttagtcaatttagtctttgaatgtagattatgttaatcactttagtccctaaaattgactaacaaagtctacattcaa 21943820  T
Q  285 ggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattc 363  Q
    || ||| |||||||||||||| |||||||| | |||||||||||||  | ||||||||| |||||||||||||||||||    
T  21943819 ggtctgttttgcaatttctctgcattcaggtactaaagtgactactcatttcccattcaaggactaaagtgactaattc 21943741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 155 - 265
Target Start/End: Original strand, 17497031 - 17497140
Alignment:
Q  155 gtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatt 254  Q
    |||| |||||||| ||||||  |||||||||||||||||||| | ||||||| |||||||||||||||||||   |||||||||| ||||||||| ||||    
T  17497031 gtcattttagtccatgaatgt-gataaattgcaaaatagtccgtgaatgtagtctctgttagtcaatttagtccttgaatgcagattctgttagttaatt 17497129  T
Q  255 tagttcctgaa 265  Q
    |||| ||||||    
T  17497130 tagtccctgaa 17497140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 212 - 366
Target Start/End: Original strand, 2555563 - 2555723
Alignment:
Q  212 gttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcagggactgatttgcaatttctct 305  Q
    ||||||||| |||||  ||||| | |||||  |||||||| |||| | ||||||||||||||      | ||||||||||||||| |||||||||| |||    
T  2555563 gttagtcaaattagtccctgaacgtagacttcgttagtcactttaatccctgaaattgaccaacgcagtctacattcagggactgttttgcaatttttct 2555662  T
Q  306 acattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccc 366  Q
     |||| || || |||||| |||| || | ||||||||||||||||| ||||||||||||||    
T  2555663 gcatttagagactaaagtaactaattatttcccattcagggactaacgtgactaattcccc 2555723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 191 - 366
Target Start/End: Complemental strand, 13753405 - 13753224
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcag 284  Q
    |||||| |||||| |||||| ||||||||||||||   ||||| | ||||||  | ||||| |||||| ||||||||||||||      | |||| ||||    
T  13753405 tagtccttaaatgcagactccgttagtcaatttagcccctgaaagtagactccatcagtcactttagtccctgaaattgaccaacagagtctacactcag 13753306  T
Q  285 ggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccc 366  Q
      |||| |||||||||||||| ||||||  || |||||||||||||  | | | ||| ||||||||||||||||||||||||    
T  13753305 atactgttttgcaatttctctgcattcaatgactaaagtgactactcattttctatttagggactaaagtgactaattcccc 13753224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 178 - 259
Target Start/End: Complemental strand, 20430098 - 20430017
Alignment:
Q  178 ataaattgcaaaatagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagtt 259  Q
    |||||||||||||||||   | ||| ||||||| ||||||||||||||||  |||||||||||||||||||| |||||||||    
T  20430098 ataaattgcaaaatagtttttgaatatagactccgttagtcaatttagttcatgaatgcagactctgttagttaatttagtt 20430017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 119 - 223
Target Start/End: Complemental strand, 19491952 - 19491848
Alignment:
Q  119 gattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtc 218  Q
    ||||||| |||||||| | |||||  |||| |||| ||||||| ||||| |||||||||| ||||||||||| ||| | | || ||||||||||||||||    
T  19491952 gattagtcactttagttcctgaatgagaaaagagtagtcacttaagtccttgaatgcagagaaattgcaaaacagtgcttgaacgtagactctgttagtc 19491853  T
Q  219 aattt 223  Q
    |||||    
T  19491852 aattt 19491848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 223
Target Start/End: Original strand, 13753229 - 13753332
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| |||||||||| | ||||| ||| |||| ||||||||||||  |||||||||| ||||||||||| |||  || | ||||||||||||| ||||    
T  13753229 attagtcactttagtccctaaatagaaaatgagtagtcactttagtcattgaatgcagagaaattgcaaaacagtatctgagtgtagactctgttggtca 13753328  T
Q  220 attt 223  Q
    ||||    
T  13753329 attt 13753332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 258
Target Start/End: Complemental strand, 19564944 - 19564796
Alignment:
Q  114 tgggagattagtgactttagtccttg----aataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagact 209  Q
    |||||||||||| |||||||||| |     |||||||||  ||||||||||||||||| |||||| |||||||||||||||||||   | |||||| |||    
T  19564944 tgggagattagtcactttagtccctccctaaataggaaatcagtcgtcactttagtccttgaatggagataaattgcaaaatagtttttgaatgtaaact 19564845  T
Q  210 ctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagt 258  Q
      ||||||||||||| |   ||| | || |||| |||||||||||||||    
T  19564844 tcgttagtcaatttattccttgattccatactccgttagtcaatttagt 19564796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 121 - 223
Target Start/End: Original strand, 20429878 - 20429980
Alignment:
Q  121 ttagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaa 220  Q
    ||||| |||||||||| |||||  ||||||||| ||| |||||| | ||| ||||||| ||||||||||| ||||  | ||||||||||||||| |||||    
T  20429878 ttagtcactttagtccctgaatgtgaaaggagtagtcgctttagcctctggatgcagagaaattgcaaaacagtctttgaatgtagactctgttggtcaa 20429977  T
Q  221 ttt 223  Q
    |||    
T  20429978 ttt 20429980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 31912271 - 31912190
Alignment:
Q  286 gactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccct 367  Q
    ||||| ||| |||| ||||| ||||||||||||||| |||||| |  | ||||||||| |||||||||||||||||||||||    
T  31912271 gactgttttacaatgtctctgcattcagggattaaaatgactattcttttcccattcaaggactaaagtgactaattcccct 31912190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 171 - 259
Target Start/End: Original strand, 12895579 - 12895667
Alignment:
Q  171 aatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagtt 259  Q
    ||||| ||||||||  ||||||||| |  |||||||||| |||||||||||||| |   | ||||||||||||||||||||||||||||    
T  12895579 aatgctgataaattaaaaaatagtctccgaatgtagactttgttagtcaatttaatccttaaatgcagactctgttagtcaatttagtt 12895667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 276 - 372
Target Start/End: Original strand, 13753423 - 13753519
Alignment:
Q  276 tacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccctttaat 372  Q
    |||||| |||||||  |||||||||| ||| ||||||| || |||| |||| |||||| ||| ||| |||||||||||||||||||  |||||||||    
T  13753423 tacatttagggactattttgcaatttatctgcattcagagactaaaatgacgacttctttcctatttagggactaaagtgactaatctccctttaat 13753519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 191 - 363
Target Start/End: Original strand, 43548872 - 43549053
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatt---tagttcctgaaattgacca------tatacatt 281  Q
    |||||| | |||| |||||||||||||||||||||  ||| |||| ||| | | ||||||| ||   |||||||| ||||||||||      | ||||||    
T  43548872 tagtccatgaatgcagactctgttagtcaatttagcatctaaatgtagatttttttagtcacttaattagttcctaaaattgaccaacatagtctacatt 43548971  T
Q  282 cagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattc 363  Q
    || | |||| |||||||||||||| || ||| ||| ||||||||||| |||  |  ||||||| ||||||||||||||||||    
T  43548972 catgtactgttttgcaatttctctgcaatcaaggactaaagtgactatttccttttcattcagagactaaagtgactaattc 43549053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 191 - 273
Target Start/End: Original strand, 30852682 - 30852764
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca 273  Q
    |||||||| |||| |||||  || |||||||||||| |||||||| ||| || |||||||| |||||||| ||||||||||||    
T  30852682 tagtccctgaatgcagacttcgtaagtcaatttagtctctgaatgtagattccgttagtcactttagttcatgaaattgacca 30852764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 258
Target Start/End: Complemental strand, 31912457 - 31912337
Alignment:
Q  138 tgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaatttagtttctgaatgca 237  Q
    |||||||||||| |||||||| |||||||| | |||| | |||||||| |||||| | | | |||||||| | ||||  || |||||||   ||||| ||    
T  31912457 tgaataggaaagaagtcgtcattttagtccataaatgtaaataaattgtaaaataattcttgaatgtagattatgttgatcgatttagtccttgaataca 31912358  T
Q  238 gactctgttagtcaatttagt 258  Q
    ||||| |||||||||||||||    
T  31912357 gactccgttagtcaatttagt 31912337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 367
Target Start/End: Original strand, 34419672 - 34419736
Alignment:
Q  303 tctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccct 367  Q
    |||||||||||||| ||||||||||||| || || |||||| ||| |||||||||||||| ||||    
T  34419672 tctacattcagggactaaagtgactactcctttctcattcaaggattaaagtgactaatttccct 34419736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 120 - 223
Target Start/End: Complemental strand, 2555718 - 2555615
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| || ||||||| ||||| |||||  | | || ||||||||| || |||||||| ||||||||||| ||||||| ||||||||||  ||| ||||    
T  2555718 attagtcacgttagtccctgaatgggaaataattagttactttagtctctaaatgcagaaaaattgcaaaacagtccctgaatgtagactgcgttggtca 2555619  T
Q  220 attt 223  Q
    ||||    
T  2555618 attt 2555615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 115 - 174
Target Start/End: Complemental strand, 34419735 - 34419676
Alignment:
Q  115 gggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatg 174  Q
    |||| |||||| |||||| |||||||||  ||||||||| ||||||||||||||||||||    
T  34419735 gggaaattagtcactttaatccttgaatgagaaaggagtagtcactttagtccctgaatg 34419676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 361
Target Start/End: Original strand, 19491877 - 19491951
Alignment:
Q  287 actgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaat 361  Q
    |||| |||||||||||||| |||||| ||| | |||||||||||  | || |||||||| |||||||||||||||    
T  19491877 actgttttgcaatttctctgcattcaaggacttaagtgactactcttttctcattcaggaactaaagtgactaat 19491951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 43549016 - 43548948
Alignment:
Q  155 gtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaattt 223  Q
    ||||||||||||| ||| |||||| ||||||||||| ||| | | |||||||||| |||| ||||||||    
T  43549016 gtcactttagtccttgattgcagagaaattgcaaaacagtacatgaatgtagactatgttggtcaattt 43548948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 270
Target Start/End: Complemental strand, 19564815 - 19564752
Alignment:
Q  207 actctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattga 270  Q
    |||| ||||||||||||||| |||||||| ||||||  ||| ||| |||||| |||||||||||    
T  19564815 actccgttagtcaatttagtctctgaatgtagactccattaatcactttagtccctgaaattga 19564752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 195
Target Start/End: Original strand, 31912196 - 31912271
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtc 195  Q
    |||||| |||||||||||||||| ||||| || | |||| |||| |||||||||||||| | |||| |||| ||||    
T  31912196 attagtcactttagtccttgaatgggaaaagaatagtcattttaatccctgaatgcagagacattgtaaaacagtc 31912271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 212 - 270
Target Start/End: Complemental strand, 32539422 - 32539365
Alignment:
Q  212 gttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattga 270  Q
    ||||||||||||||||  |||||| ||||| ||||||||| ||||| ||||||||||||    
T  32539422 gttagtcaatttagttcttgaatgtagactatgttagtcactttag-tcctgaaattga 32539365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 11298062 - 11298127
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaattta 256  Q
    ||||| || |||| ||||||  ||||||||||||||| ||||||| ||||||||||| ||| ||||    
T  11298062 tagtctctgaatgcagactccattagtcaatttagttcctgaatgtagactctgttaatcacttta 11298127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 30100614 - 30100703
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagact 209  Q
    |||||| |||||||||| | | |  |||| |||| ||||||||| ||||| |||||||| ||||||||||| | ||| | ||||||||||    
T  30100614 attagtcactttagtccctaagtgagaaaagagtagtcactttaatccctaaatgcagagaaattgcaaaacaatccttgaatgtagact 30100703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 361
Target Start/End: Complemental strand, 30852639 - 30852586
Alignment:
Q  308 attcagggattaaagtgactacttctatcccattcagggactaaagtgactaat 361  Q
    ||||||||| ||||||||| |||| | ||| ||||| |||||||||||||||||    
T  30852639 attcagggactaaagtgacgacttatttcctattcaaggactaaagtgactaat 30852586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 34419604 - 34419665
Alignment:
Q  212 gttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca 273  Q
    |||||||||||||||   | |||| |||||||||| |||| |||||| ||||||||||||||    
T  34419604 gttagtcaatttagtccttaaatgtagactctgttggtcattttagtccctgaaattgacca 34419665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 276 - 352
Target Start/End: Complemental strand, 34419565 - 34419489
Alignment:
Q  276 tacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaa 352  Q
    ||||||||||||||  |||||||||| ||| ||||| | |||||||||||| ||| || | | |||||| |||||||    
T  34419565 tacattcagggactattttgcaatttatctgcattctgagattaaagtgacgactccttttctattcagagactaaa 34419489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 93; Significance: 6e-45; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 455 - 597
Target Start/End: Original strand, 37123 - 37262
Alignment:
Q  455 tcaagttggtatgttgacaatttaaacatgtaaggaaattctttaagattttatgtttaataagtaaatgatgaatcgttaattaggttcctgaatgacc 554  Q
    |||||||||||||| ||||||||||| |||| ||||||||| |||||||||||||||||||||||| ||||   |||||||||||||||||| ||| |||    
T  37123 tcaagttggtatgtcgacaatttaaagatgtgaggaaattcattaagattttatgtttaataagtacatga---atcgttaattaggttccttaattacc 37219  T
Q  555 actattgaattagtccctcaactatagatactaaacggtcctt 597  Q
    ||| |||||||||||||||||||||||| ||||||||||||||    
T  37220 actgttgaattagtccctcaactatagaaactaaacggtcctt 37262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 85; Significance: 3e-40; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 113 - 366
Target Start/End: Original strand, 11599 - 11855
Alignment:
Q  113 ttgggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctg 212  Q
    ||||||||||||| |||||||||  ||||||||||| ||||||| | |||||||| | ||||||||||||||| |||||||||||| |||||||||| ||    
T  11599 ttgggagattagtcactttagtcactgaataggaaatgagtcgttattttagtcc-taaatgcagataaattgtaaaatagtccctgaatgtagactatg 11697  T
Q  213 ttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca----tatacattcagggactgatttgcaatttctctaca 308  Q
    |||| ||||||| | |||||||| | | ||||||||||| |||||| ||| |||||||| |      |  ||| | |||||  |||||||||||||| ||    
T  11698 ttaggcaatttaatctctgaatgtatattctgttagtcactttagtccctaaaattgactaagagagtctatttaaggactattttgcaatttctctgca 11797  T
Q  309 ttcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccc 366  Q
    |||||||| ||||| |||||||  | ||||||||||  |||||||||| |||||||||    
T  11798 ttcagggactaaagcgactactcatttcccattcagaaactaaagtgattaattcccc 11855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 138 - 223
Target Start/End: Complemental strand, 11832 - 11749
Alignment:
Q  138 tgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaattt 223  Q
    ||||| ||||| |||| ||| |||||||||||||||||||| ||||||||||||||||| ||||  |||||||| |||||||||||    
T  11832 tgaatgggaaatgagtagtcgctttagtccctgaatgcagagaaattgcaaaatagtccttaaa--tagactctcttagtcaattt 11749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 82; Significance: 2e-38; HSPs: 3)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 117 - 258
Target Start/End: Original strand, 15362 - 15503
Alignment:
Q  117 gagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttag 216  Q
    ||||||||| ||||||||| ||||||  |||| |||| ||||||||||||| ||||||||||||||||| ||||||||| || |||||||||||||||||    
T  15362 gagattagtcactttagtctttgaattagaaatgagttgtcactttagtccttgaatgcagataaattgtaaaatagtctctgaatgtagactctgttag 15461  T
Q  217 tcaatttagtttctgaatgcagactctgttagtcaatttagt 258  Q
    |||||||| | |||||||| |||||| ||||| |||||||||    
T  15462 tcaatttaatctctgaatgtagactccgttagccaatttagt 15503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 200 - 360
Target Start/End: Original strand, 15477 - 15638
Alignment:
Q  200 aatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca--tatacattcagggactgatttgca 297  Q
    ||||||||||| ||||| ||||||||| |||||||| ||| ||||| ||||  |||||| |||||||||||| |   |   ||||| |||||| ||||||    
T  15477 aatgtagactccgttagccaatttagtctctgaatgtagattctgtcagtcgttttagtacctgaaattgactaacaaagtattca-ggactgttttgca 15575  T
Q  298 atttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaa 360  Q
    |||||||| ||||||| || |||| ||||| ||  | ||||||||| |||||||||| |||||    
T  15576 atttctctgcattcagagactaaattgacttctattctcccattcatggactaaagtcactaa 15638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 15638 - 15563
Alignment:
Q  121 ttagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtcc 196  Q
    |||||||||||||||| ||||| ||| |  ||  |||| ||||||| ||||||||||| ||||||||||| |||||    
T  15638 ttagtgactttagtccatgaatgggagaatagaagtcaatttagtctctgaatgcagagaaattgcaaaacagtcc 15563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 78; Significance: 5e-36; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 168 - 265
Target Start/End: Original strand, 314126 - 314223
Alignment:
Q  168 ctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||| ||||||    
T  314126 ctgaatgcagattaattgcaaaatagtccctaaatgtagactctgttagtcaatttagtccctgaatgcagactccgttagtcaatttagtccctgaa 314223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 191 - 273
Target Start/End: Original strand, 314181 - 314263
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca 273  Q
    |||||||| |||| |||||| |||||||||||||||  ||||||| ||| ||||||||||| |||||| ||||||||| ||||    
T  314181 tagtccctgaatgcagactccgttagtcaatttagtccctgaatgtagagtctgttagtcactttagtccctgaaattaacca 314263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 76; Significance: 8e-35; HSPs: 3)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 115 - 258
Target Start/End: Original strand, 23887 - 24030
Alignment:
Q  115 gggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtt 214  Q
    ||||||||||| |||||||| | | ||||||||| |||||||| ||||||||| |||||  |||||||||||||||| |||||  ||||||||||  |||    
T  23887 gggagattagtcactttagttcctaaataggaaatgagtcgtccctttagtccttgaatatagataaattgcaaaatggtccccgaatgtagactacgtt 23986  T
Q  215 agtcaatttagtttctgaatgcagactctgttagtcaatttagt 258  Q
    ||||||||||||  |||||||||||||||||| |||||||||||    
T  23987 agtcaatttagtccctgaatgcagactctgttggtcaatttagt 24030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 191 - 368
Target Start/End: Original strand, 23995 - 24177
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcag 284  Q
    |||||||| |||| |||||||||| |||||||||||   |||||| ||||| | || |||| ||| || | ||||||||||||      | |||||||||    
T  23995 tagtccctgaatgcagactctgttggtcaatttagtccttgaatgtagactttattcgtcacttttgtccatgaaattgaccaacagaatctacattcag 24094  T
Q  285 ggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccctt 368  Q
    ||| || |||||||||||||| |||||||||| ||||   ||||| ||| | ||||||||||| ||||||||||||||| ||||    
T  24095 ggattgttttgcaatttctctgcattcagggactaaaacaactac-tcttttccattcagggattaaagtgactaattctcctt 24177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 160 - 223
Target Start/End: Complemental strand, 24131 - 24068
Alignment:
Q  160 tttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaattt 223  Q
    ||||||||||||||||||| ||||||||||| | ||||| |||||||| |||||| ||||||||    
T  24131 tttagtccctgaatgcagagaaattgcaaaacaatccctgaatgtagattctgttggtcaattt 24068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 67; Significance: 2e-29; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 116 - 258
Target Start/End: Complemental strand, 190460 - 190319
Alignment:
Q  116 ggagattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtta 215  Q
    |||||||||| | |||||| | ||||||| ||| || ||||  ||||| |||||||||| |||||||||||||||||||  ||||||  ||||| |||||    
T  190460 ggagattagtca-tttagttcctgaatagaaaaagaatcgttcctttaatccctgaatgtagataaattgcaaaatagtttctaaatacagactttgtta 190362  T
Q  216 gtcaatttagtttctgaatgcagactctgttagtcaatttagt 258  Q
    |||||||||||| |||||| |||||||||||||||||||||||    
T  190361 gtcaatttagttcctgaatacagactctgttagtcaatttagt 190319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 205 - 365
Target Start/End: Complemental strand, 190340 - 190174
Alignment:
Q  205 agactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcagggactgatttgcaa 298  Q
    ||||||||||||||||||||||  || |||| | ||| ||||| |||||||| | ||||||||||||||      | ||||||||| ||||| |||||||    
T  190340 agactctgttagtcaatttagtccctaaatgtaaactatgttaatcaatttaatccctgaaattgaccaacagagtctacattcagagactgttttgcaa 190241  T
Q  299 tttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattccc 365  Q
    ||||||| ||||||| || |||| ||||||||  | |||||||||||||||||| ||||||||||||    
T  190240 tttctctgcattcagagactaaaatgactactcttttcccattcagggactaaaatgactaattccc 190174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 120 - 223
Target Start/End: Original strand, 190178 - 190281
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| | |||||||| ||||| ||||| |||| |||| ||||||| ||||||||||| ||||||||||| |||| || ||||||||||||||| ||||    
T  190178 attagtcattttagtccctgaatgggaaaagagtagtcattttagtctctgaatgcagagaaattgcaaaacagtctctgaatgtagactctgttggtca 190277  T
Q  220 attt 223  Q
    ||||    
T  190278 attt 190281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 190386 - 190344
Alignment:
Q  223 tagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    |||||||| ||| |||||| |||||||||||||||||||||||    
T  190386 tagtttctaaatacagactttgttagtcaatttagttcctgaa 190344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 66; Significance: 7e-29; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 217 - 355
Target Start/End: Complemental strand, 59855 - 59711
Alignment:
Q  217 tcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcagggactgatttgcaatttctctacatt 310  Q
    ||||||||||  |||||||||||||| ||||||||||||||| |||||||||||| |      | ||||||||||| ||| |||||||||||||| ||||    
T  59855 tcaatttagtccctgaatgcagactccgttagtcaatttagtccctgaaattgactaacagagtctacattcaggggctgttttgcaatttctctgcatt 59756  T
Q  311 cagggattaaagtgactacttctatcccattcagggactaaagtg 355  Q
    |||||| ||||||||||||  || ||||||| |||||||||||||    
T  59755 cagggactaaagtgactacacctttcccattgagggactaaagtg 59711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 127 - 223
Target Start/End: Original strand, 59712 - 59808
Alignment:
Q  127 actttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaattt 223  Q
    |||||||||| | ||| ||||||| || |||||||||||||||||||||||| ||||||||||| || |||| ||||||||||||||||||||||||    
T  59712 actttagtccctcaatgggaaaggtgtagtcactttagtccctgaatgcagagaaattgcaaaacagcccctgaatgtagactctgttagtcaattt 59808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 65; Significance: 3e-28; HSPs: 3)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 120 - 256
Target Start/End: Original strand, 127804 - 127940
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| ||||| |||| |||||||||||| | |  |||||||||||| ||||||||||||||||||||||||||  || |||||| ||| |||||||||    
T  127804 attagtcactttggtccctgaataggaaagaaattatcactttagtccatgaatgcagataaattgcaaaatagtttctgaatgtatactatgttagtca 127903  T
Q  220 atttagtttctgaatgcagactctgttagtcaattta 256  Q
    | ||||| ||||||||||||||  |||| ||||||||    
T  127904 acttagtatctgaatgcagacttcgttaatcaattta 127940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 119 - 223
Target Start/End: Complemental strand, 128084 - 127980
Alignment:
Q  119 gattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtc 218  Q
    ||||||| |||||||| | |||||  |||| |||| ||||||| ||| | |||||||||| ||||||||||| ||| | | || ||||||||||||||||    
T  128084 gattagtcactttagttcctgaatcagaaaagagtagtcacttaagtacttgaatgcagagaaattgcaaaacagtgcttgaacgtagactctgttagtc 127985  T
Q  219 aattt 223  Q
    |||||    
T  127984 aattt 127980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 274 - 362
Target Start/End: Complemental strand, 127891 - 127803
Alignment:
Q  274 tatacattcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaatt 362  Q
    |||||||||||  |||  |||||||||| ||| |||||| ||| ||||||||  | |||| ||| |||||||||| |||||||||||||    
T  127891 tatacattcagaaactattttgcaatttatctgcattcatggactaaagtgataatttctttcctattcagggaccaaagtgactaatt 127803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 64; Significance: 1e-27; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 122 - 265
Target Start/End: Original strand, 57451 - 57594
Alignment:
Q  122 tagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaat 221  Q
    |||| ||||| |||| |||||||||||| | |  |||||||||||| ||||||||||||||||| ||||||||  || |||||| ||| ||||||||||     
T  57451 tagtcactttggtccctgaataggaaagaaattatcactttagtccatgaatgcagataaattgaaaaatagtttctgaatgtatactatgttagtcaac 57550  T
Q  222 ttagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    ||||| ||||||||||||||  |||| |||||||||| ||||||    
T  57551 ttagtatctgaatgcagacttcgttaatcaatttagtccctgaa 57594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 119 - 223
Target Start/End: Complemental strand, 57729 - 57625
Alignment:
Q  119 gattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtc 218  Q
    ||||||| |||||||| | |||||  |||| |||| ||||||| ||| | | |||||||| ||||||||||| ||| | | || ||||||||||||||||    
T  57729 gattagtcactttagttcctgaatcagaaaagagtagtcacttaagtactttaatgcagagaaattgcaaaacagtgcttgaacgtagactctgttagtc 57630  T
Q  219 aattt 223  Q
    |||||    
T  57629 aattt 57625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 56; Significance: 7e-23; HSPs: 8)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 191 - 367
Target Start/End: Complemental strand, 1011 - 830
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcag 284  Q
    |||||||| |||| |||||  ||||||||||||| |  ||||||| ||||| ||||||||| |||||| |||||||||||| |      | |||||||||    
T  1011 tagtccctgaatgcagacttcgttagtcaatttaatccctgaatgtagactttgttagtcactttagtccctgaaattgactaatagagtctacattcag 912  T
Q  285 ggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccct 367  Q
    | |||| |||||||||||||| |||||||||| |||||||||| ||  | | ||||||||  ||||||||||| |||||||||    
T  911 g-actgttttgcaatttctctgcattcagggactaaagtgacttctctttttccattcagaaactaaagtgaccaattcccct 830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 191 - 367
Target Start/End: Complemental strand, 7475 - 7294
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcag 284  Q
    |||||||| |||| |||||  ||||||||||||| |  ||||||| ||||| ||||||||| |||||| |||||||||||| |      | |||||||||    
T  7475 tagtccctgaatgcagacttcgttagtcaatttaatccctgaatgtagactttgttagtcactttagtccctgaaattgactaatagagtctacattcag 7376  T
Q  285 ggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcccct 367  Q
    | |||| |||||||||||||| |||||||||| |||||||||| ||  | | ||||||||  ||||||||||| |||||||||    
T  7375 g-actgttttgcaatttctctgcattcagggactaaagtgacttctctttttccattcagaaactaaagtgaccaattcccct 7294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 155 - 265
Target Start/End: Complemental strand, 1111 - 1001
Alignment:
Q  155 gtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatt 254  Q
    ||||||||||||| |||||||| ||||||| ||||||||||||| || ||||||| | ||| ||||||||||  ||||||||||| |  |||||||||||    
T  1111 gtcactttagtccttgaatgcaaataaattacaaaatagtccctgaacgtagactttattattcaatttagtccctgaatgcagatttcgttagtcaatt 1012  T
Q  255 tagttcctgaa 265  Q
    |||| ||||||    
T  1011 tagtccctgaa 1001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 155 - 265
Target Start/End: Complemental strand, 7575 - 7465
Alignment:
Q  155 gtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatt 254  Q
    ||||||||||||| |||||||| ||||||| ||||||||||||| || ||||||| | ||| ||||||||||  ||||||||||| |  |||||||||||    
T  7575 gtcactttagtccttgaatgcaaataaattacaaaatagtccctgaacgtagactttattattcaatttagtccctgaatgcagatttcgttagtcaatt 7476  T
Q  255 tagttcctgaa 265  Q
    |||| ||||||    
T  7475 tagtccctgaa 7465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 871 - 938
Alignment:
Q  155 gtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaattt 223  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||| |||||||||||| |||||||||||    
T  871 gtcactttagtccctgaatgcagagaaattgcaaaacagt-cctgaatgtagactctattagtcaattt 938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 7335 - 7402
Alignment:
Q  155 gtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtcaattt 223  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||| |||||||||||| |||||||||||    
T  7335 gtcactttagtccctgaatgcagagaaattgcaaaacagt-cctgaatgtagactctattagtcaattt 7402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 191 - 265
Target Start/End: Complemental strand, 1043 - 969
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    |||||||| |||| ||| |  |||||||||||||||  |||||||||||||  ||||||||||||| | ||||||    
T  1043 tagtccctgaatgcagatttcgttagtcaatttagtccctgaatgcagacttcgttagtcaatttaatccctgaa 969  T

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Target: scaffold0407; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 191 - 265
Target Start/End: Complemental strand, 7507 - 7433
Alignment:
Q  191 tagtccctaaatgtagactctgttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    |||||||| |||| ||| |  |||||||||||||||  |||||||||||||  ||||||||||||| | ||||||    
T  7507 tagtccctgaatgcagatttcgttagtcaatttagtccctgaatgcagacttcgttagtcaatttaatccctgaa 7433  T

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Target: scaffold1300 (Bit Score: 52; Significance: 2e-20; HSPs: 3)
Name: scaffold1300
Description:

Target: scaffold1300; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 120 - 265
Target Start/End: Original strand, 1357 - 1495
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| ||||||||||||||||||||||  | |  |||||||||||||| |||||||||||||||||||||||||        || ||| ||||| |||    
T  1357 attagtcactttagtccttgaataggaaataaattatcactttagtccctaaatgcagataaattgcaaaatagtc-------ttatactatgttaatca 1449  T
Q  220 atttagtttctgaatgcagactctgttagtcaatttagttcctgaa 265  Q
    | ||||| ||||||||||||||  |||||| |||||||| ||||||    
T  1450 acttagtctctgaatgcagacttcgttagttaatttagtccctgaa 1495  T

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Target: scaffold1300; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 119 - 223
Target Start/End: Complemental strand, 1630 - 1526
Alignment:
Q  119 gattagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtc 218  Q
    ||||||| |||||||| | |||||  |||| |||| ||||||| ||||| |||||||||| ||||||||||| ||||| | || ||||||||||||||||    
T  1630 gattagtcactttagttcctgaatgagaaaagagtagtcacttaagtccttgaatgcagagaaattgcaaaacagtccttgaacgtagactctgttagtc 1531  T
Q  219 aattt 223  Q
    |||||    
T  1530 aattt 1526  T

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Target: scaffold1300; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 280 - 361
Target Start/End: Original strand, 1548 - 1629
Alignment:
Q  280 ttcagggactgatttgcaatttctctacattcagggattaaagtgactacttctatcccattcagggactaaagtgactaat 361  Q
    |||| |||||| |||||||||||||| |||||| ||| | |||||||||||  | || |||||||| |||||||||||||||    
T  1548 ttcaaggactgttttgcaatttctctgcattcaaggacttaagtgactactcttttctcattcaggaactaaagtgactaat 1629  T

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Target: scaffold0039 (Bit Score: 48; Significance: 4e-18; HSPs: 3)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 120 - 223
Target Start/End: Original strand, 27489 - 27592
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccctaaatgtagactctgttagtca 219  Q
    |||||| |||||||||| ||||||| ||| |||| || ||||||| |||||||| | || ||||||||||| |||| || ||||||||||||||| ||||    
T  27489 attagtcactttagtccctgaatagaaaatgagtagttactttagcccctgaatacggagaaattgcaaaacagtctcttaatgtagactctgttggtca 27588  T
Q  220 attt 223  Q
    ||||    
T  27589 attt 27592  T

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Target: scaffold0039; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 193
Target Start/End: Complemental strand, 27755 - 27682
Alignment:
Q  120 attagtgactttagtccttgaataggaaaggagtcgtcactttagtccctgaatgcagataaattgcaaaatag 193  Q
    |||||| |||| ||||| ||| |||||||| ||||||||||||||||  |||||||| ||||||||||||||||    
T  27755 attagtcacttaagtccctgattaggaaagtagtcgtcactttagtctatgaatgcaaataaattgcaaaatag 27682  T

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Target: scaffold0039; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 212 - 364
Target Start/End: Complemental strand, 27644 - 27486
Alignment:
Q  212 gttagtcaatttagtttctgaatgcagactctgttagtcaatttagttcctgaaattgacca------tatacattcagggactgatttgcaatttctct 305  Q
    ||||||||||||| || ||||||| |||||  ||| |||| |||||| | ||||||||||||      | |||||| || ||||| |||||||||||||     
T  27644 gttagtcaatttacttcctgaatgtagacttcgttcgtcactttagtccttgaaattgaccaacagagtctacattaagagactgttttgcaatttctcc 27545  T
Q  306 acattcagggattaaagtgactacttctatcccattcagggactaaagtgactaattcc 364  Q
      ||||||||  |||||| ||||||  | | | ||||||||||||||||||||||||||    
T  27544 gtattcaggggctaaagtaactactcattttctattcagggactaaagtgactaattcc 27486  T

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