View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18978_high_19 (Length: 237)
Name: NF18978_high_19
Description: NF18978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18978_high_19 |
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Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 12418468 - 12418249
Alignment:
| Q |
1 |
atctaaaggtcttttggaggttgaaatatggtaaaatttcctctattttttctgcaggaaaattttgtaaaccagttctatttgaattaatcatgcattt |
100 |
Q |
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| T |
12418468 |
atctaaaggtcttttggaggttcaa-tatggtaaaatttcctctattttttctgcaggaaaattttgtaaaccagttctatttgaattaatcatgcattt |
12418370 |
T |
|
| Q |
101 |
ttctatactgatgtcttggataagctaaaacaggcatgtattcaaatgtatgttaggatgtttcctattatgtgttgttgattggtgtttgagattatat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12418369 |
ttctatactgatgtcttggataagctaaaacaggcatgtattcaaatgtatgttaggatgtttcctattatgtgttgttgattggtgtttgagattatat |
12418270 |
T |
|
| Q |
201 |
ggctgctagctatattttatt |
221 |
Q |
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||||||||||||||||||||| |
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| T |
12418269 |
ggctgctagctatattttatt |
12418249 |
T |
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