View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1897_low_9 (Length: 223)

Name: NF1897_low_9
Description: NF1897
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1897_low_9
NF1897_low_9
[»] chr6 (11 HSPs)
chr6 (66-223)||(6320199-6320356)
chr6 (66-223)||(24088418-24088575)
chr6 (66-223)||(31768981-31769142)
chr6 (14-70)||(6320048-6320104)
chr6 (14-70)||(31769237-31769293)
chr6 (124-194)||(3381082-3381152)
chr6 (139-219)||(30424143-30424223)
chr6 (70-117)||(21600990-21601037)
chr6 (14-68)||(24088267-24088321)
chr6 (66-105)||(3381182-3381221)
chr6 (139-223)||(29821737-29821821)
[»] chr5 (28 HSPs)
chr5 (66-223)||(512408-512565)
chr5 (66-223)||(19228308-19228465)
chr5 (66-223)||(42537429-42537586)
chr5 (66-223)||(38968377-38968535)
chr5 (66-223)||(7757604-7757761)
chr5 (66-223)||(42942122-42942279)
chr5 (66-223)||(14325-14482)
chr5 (66-223)||(8580141-8580298)
chr5 (66-223)||(8701860-8702017)
chr5 (66-223)||(28876923-28877080)
chr5 (66-223)||(17658602-17658759)
chr5 (66-223)||(28241435-28241592)
chr5 (66-223)||(40624550-40624716)
chr5 (127-223)||(20422219-20422315)
chr5 (14-70)||(7757856-7757912)
chr5 (14-70)||(42941972-42942028)
chr5 (14-70)||(17658854-17658910)
chr5 (14-70)||(28877174-28877230)
chr5 (14-70)||(42537681-42537737)
chr5 (15-70)||(8579992-8580047)
chr5 (66-117)||(19040753-19040804)
chr5 (14-70)||(512257-512313)
chr5 (14-70)||(19228157-19228213)
chr5 (14-70)||(38968630-38968686)
chr5 (14-70)||(8701709-8701765)
chr5 (23-70)||(28241294-28241341)
chr5 (70-117)||(5197359-5197406)
chr5 (70-117)||(27673293-27673340)
[»] chr4 (40 HSPs)
chr4 (66-223)||(55407423-55407580)
chr4 (66-223)||(51683482-51683639)
chr4 (66-223)||(21022524-21022681)
chr4 (66-223)||(48256207-48256364)
chr4 (67-223)||(50275014-50275170)
chr4 (66-223)||(67871-68028)
chr4 (66-223)||(50901760-50901917)
chr4 (66-223)||(37021719-37021876)
chr4 (66-223)||(40357916-40358073)
chr4 (66-211)||(46436536-46436681)
chr4 (66-194)||(30726377-30726505)
chr4 (66-223)||(1308750-1308907)
chr4 (66-223)||(1089220-1089377)
chr4 (66-223)||(14297405-14297572)
chr4 (66-223)||(14315654-14315821)
chr4 (70-223)||(11083646-11083809)
chr4 (70-223)||(21538092-21538255)
chr4 (66-223)||(10753063-10753230)
chr4 (66-223)||(10966832-10966999)
chr4 (14-70)||(21022374-21022430)
chr4 (14-70)||(50902011-50902067)
chr4 (14-70)||(51683734-51683790)
chr4 (14-70)||(48256056-48256112)
chr4 (14-70)||(55407272-55407328)
chr4 (145-223)||(4720083-4720161)
chr4 (14-70)||(40357766-40357822)
chr4 (14-70)||(50275266-50275322)
chr4 (66-117)||(41798631-41798682)
chr4 (70-117)||(11050163-11050210)
chr4 (23-70)||(1089079-1089126)
chr4 (23-70)||(1308609-1308656)
chr4 (14-52)||(37021563-37021601)
chr4 (70-117)||(9892908-9892955)
chr4 (23-62)||(30726236-30726275)
chr4 (70-117)||(50023183-50023230)
chr4 (70-117)||(50030301-50030348)
chr4 (14-52)||(68070-68108)
chr4 (170-223)||(30704303-30704356)
chr4 (64-117)||(49165419-49165472)
chr4 (14-50)||(46436725-46436761)
[»] chr1 (36 HSPs)
chr1 (66-223)||(35258509-35258666)
chr1 (66-223)||(45825156-45825313)
chr1 (66-223)||(47502595-47502752)
chr1 (66-223)||(51320994-51321151)
chr1 (67-223)||(19527180-19527336)
chr1 (66-223)||(23275739-23275897)
chr1 (66-223)||(31783364-31783521)
chr1 (66-223)||(52802411-52802568)
chr1 (66-223)||(19925022-19925179)
chr1 (66-223)||(30890341-30890498)
chr1 (66-223)||(49857579-49857736)
chr1 (111-223)||(29622105-29622217)
chr1 (135-223)||(11183461-11183549)
chr1 (139-223)||(11196160-11196244)
chr1 (14-70)||(31783213-31783269)
chr1 (14-69)||(23275589-23275644)
chr1 (70-221)||(17514336-17514497)
chr1 (168-222)||(22524407-22524461)
chr1 (14-70)||(19527028-19527084)
chr1 (14-70)||(45825409-45825465)
chr1 (14-70)||(47502835-47502891)
chr1 (14-70)||(35258358-35258414)
chr1 (14-70)||(52802663-52802719)
chr1 (168-223)||(2425113-2425168)
chr1 (14-59)||(19524671-19524716)
chr1 (14-59)||(19524858-19524903)
chr1 (14-59)||(19525519-19525564)
chr1 (14-59)||(19526654-19526699)
chr1 (14-59)||(19526841-19526886)
chr1 (14-70)||(51321246-51321301)
chr1 (23-70)||(19925273-19925320)
chr1 (23-70)||(30890592-30890639)
chr1 (170-223)||(38127223-38127276)
chr1 (119-223)||(25147573-25147676)
chr1 (70-117)||(2365622-2365669)
chr1 (70-117)||(19156401-19156448)
[»] chr3 (40 HSPs)
chr3 (66-223)||(20917653-20917810)
chr3 (66-223)||(20926615-20926772)
chr3 (66-223)||(49196083-49196240)
chr3 (66-223)||(42756433-42756590)
chr3 (66-223)||(50963234-50963391)
chr3 (66-223)||(4007959-4008116)
chr3 (66-223)||(42165442-42165599)
chr3 (66-223)||(44229993-44230150)
chr3 (66-223)||(48889023-48889180)
chr3 (66-223)||(51807249-51807406)
chr3 (66-223)||(30255638-30255795)
chr3 (67-223)||(50216515-50216671)
chr3 (66-223)||(47073843-47074000)
chr3 (66-223)||(3501528-3501685)
chr3 (70-223)||(597038-597191)
chr3 (66-223)||(3975986-3976143)
chr3 (66-223)||(42805898-42806047)
chr3 (66-223)||(48563223-48563364)
chr3 (14-70)||(3976238-3976294)
chr3 (14-70)||(42165694-42165750)
chr3 (14-70)||(44230245-44230301)
chr3 (14-70)||(47073692-47073748)
chr3 (14-69)||(50963486-50963541)
chr3 (70-223)||(31045234-31045386)
chr3 (14-70)||(48889266-48889322)
chr3 (14-62)||(54681977-54682025)
chr3 (14-70)||(4007808-4007864)
chr3 (14-70)||(30255487-30255543)
chr3 (14-70)||(42756683-42756739)
chr3 (14-70)||(48563459-48563515)
chr3 (14-70)||(20917500-20917558)
chr3 (14-70)||(20926462-20926520)
chr3 (14-70)||(49195932-49195988)
chr3 (70-117)||(52391036-52391083)
chr3 (14-70)||(42805746-42805803)
chr3 (70-117)||(16611463-16611510)
chr3 (70-117)||(22047743-22047790)
chr3 (70-117)||(36127822-36127869)
chr3 (70-117)||(41612753-41612800)
chr3 (14-43)||(49268753-49268782)
[»] chr8 (36 HSPs)
chr8 (66-219)||(5303857-5304010)
chr8 (66-223)||(39846622-39846779)
chr8 (66-223)||(39601995-39602152)
chr8 (66-223)||(40076886-40077043)
chr8 (66-223)||(41249709-41249866)
chr8 (66-223)||(43188329-43188486)
chr8 (66-222)||(15036364-15036520)
chr8 (66-223)||(34822653-34822810)
chr8 (66-223)||(43211785-43211942)
chr8 (66-223)||(39252292-39252448)
chr8 (66-223)||(39938852-39939009)
chr8 (76-223)||(45064521-45064668)
chr8 (99-223)||(25864609-25864732)
chr8 (66-223)||(42485174-42485331)
chr8 (70-223)||(24249763-24249915)
chr8 (66-194)||(489265-489393)
chr8 (145-223)||(37327084-37327161)
chr8 (168-223)||(2984402-2984457)
chr8 (14-70)||(5303706-5303762)
chr8 (14-70)||(15036213-15036269)
chr8 (14-70)||(43212037-43212093)
chr8 (14-70)||(39252534-39252590)
chr8 (14-70)||(40076744-40076800)
chr8 (14-70)||(43188581-43188637)
chr8 (160-206)||(35026740-35026786)
chr8 (66-122)||(37327164-37327220)
chr8 (14-70)||(39938701-39938757)
chr8 (14-70)||(41249574-41249630)
chr8 (14-70)||(45064762-45064818)
chr8 (14-70)||(34822501-34822558)
chr8 (138-194)||(22495216-22495272)
chr8 (28-70)||(39846485-39846527)
chr8 (23-70)||(489124-489171)
chr8 (23-70)||(42485024-42485071)
chr8 (70-117)||(35552051-35552098)
chr8 (14-50)||(37327264-37327300)
[»] chr7 (30 HSPs)
chr7 (66-223)||(39460808-39460965)
chr7 (66-223)||(10517260-10517417)
chr7 (66-223)||(47776614-47776771)
chr7 (67-223)||(34738646-34738802)
chr7 (66-223)||(17835356-17835513)
chr7 (66-223)||(36977878-36978035)
chr7 (66-223)||(47672721-47672878)
chr7 (66-223)||(9494431-9494588)
chr7 (66-223)||(27453255-27453412)
chr7 (66-223)||(37340584-37340741)
chr7 (66-223)||(15073864-15074021)
chr7 (66-223)||(42507663-42507820)
chr7 (66-194)||(14689694-14689822)
chr7 (134-223)||(17741162-17741251)
chr7 (14-70)||(17835608-17835664)
chr7 (14-70)||(27453104-27453160)
chr7 (14-70)||(47776866-47776922)
chr7 (14-70)||(36978130-36978186)
chr7 (14-70)||(9494281-9494337)
chr7 (14-70)||(39461060-39461116)
chr7 (14-70)||(34738898-34738954)
chr7 (14-70)||(47672570-47672626)
chr7 (14-70)||(37340836-37340892)
chr7 (23-70)||(15073723-15073770)
chr7 (70-117)||(17741088-17741135)
chr7 (23-70)||(42507522-42507569)
chr7 (33-70)||(10517512-10517549)
chr7 (170-223)||(41734443-41734496)
chr7 (70-117)||(556286-556333)
chr7 (24-62)||(14689553-14689591)
[»] chr2 (21 HSPs)
chr2 (66-223)||(7185309-7185466)
chr2 (66-223)||(21998470-21998627)
chr2 (66-223)||(25965100-25965257)
chr2 (66-223)||(39947880-39948037)
chr2 (66-223)||(28468921-28469078)
chr2 (66-223)||(32955990-32956147)
chr2 (66-223)||(17420847-17421004)
chr2 (66-223)||(45428871-45429028)
chr2 (101-223)||(45137103-45137225)
chr2 (14-70)||(39948132-39948188)
chr2 (14-70)||(45429122-45429178)
chr2 (134-223)||(31367309-31367398)
chr2 (14-70)||(22686910-22686966)
chr2 (14-70)||(28469172-28469228)
chr2 (14-70)||(45136788-45136844)
chr2 (14-58)||(32955844-32955888)
chr2 (139-223)||(35464313-35464397)
chr2 (23-70)||(17421098-17421145)
chr2 (70-117)||(20938282-20938329)
chr2 (70-117)||(29401244-29401291)
chr2 (170-223)||(25515549-25515602)
[»] scaffold0634 (2 HSPs)
scaffold0634 (66-223)||(7698-7855)
scaffold0634 (14-50)||(7899-7935)
[»] scaffold0180 (2 HSPs)
scaffold0180 (66-223)||(15259-15416)
scaffold0180 (14-70)||(15107-15164)
[»] scaffold0293 (2 HSPs)
scaffold0293 (66-223)||(364-521)
scaffold0293 (33-70)||(233-270)
[»] scaffold0155 (3 HSPs)
scaffold0155 (124-223)||(8483-8582)
scaffold0155 (66-96)||(10761-10791)
scaffold0155 (14-52)||(10833-10871)
[»] scaffold0007 (1 HSPs)
scaffold0007 (70-223)||(251116-251268)
[»] scaffold0101 (1 HSPs)
scaffold0101 (145-223)||(40750-40828)
[»] scaffold0238 (1 HSPs)
scaffold0238 (70-116)||(18573-18619)


Alignment Details
Target: chr6 (Bit Score: 150; Significance: 2e-79; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 6320199 - 6320356
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  6320199 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacataggcaacaactacattcatttatcaattcataaa 6320298  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6320299 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 6320356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 24088418 - 24088575
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||    
T  24088418 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatcatttaaacaacatagacaacaactacattcatttatcaattcataaa 24088517  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  24088518 ctacacatgcaattatcaaattgtcaattttaaaatcaacactaaccacatgcaaact 24088575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 31769142 - 31768981
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||  ||||||||| |||||||| ||||||| ||||    
T  31769142 tataaaacatattcaaattgtgttcttttgccaccattcaaaaccacattatgatttaaacaacataagcaacaactacattcatttgtcaattcctaaa 31769043  T
Q  166 ctacacat----gcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    | ||||||    ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31769042 ccacacatgcaagcaatcatcaaattgtcgattttaaaatcaaccctaaccacatgcaaact 31768981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 6320048 - 6320104
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  6320048 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactataa 6320104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 31769293 - 31769237
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  31769293 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactataa 31769237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 194
Target Start/End: Complemental strand, 3381152 - 3381082
Alignment:
Q  124 aacaacatagacaacaactaaattcatttatcaattcataaactacacatgcaatcatcaaattgtcaatt 194  Q
    |||| ||||| ||||||||| ||||||| |||||| ||||||||||||||||||| || ||||||||||||    
T  3381152 aacagcataggcaacaactatattcattcatcaatgcataaactacacatgcaatgatgaaattgtcaatt 3381082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 219
Target Start/End: Original strand, 30424143 - 30424223
Alignment:
Q  139 aactaaattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgca 219  Q
    ||||| |||||||||||||||| ||||||| |||||||||||||||| ||||||||   | || ||| |||||||||||||    
T  30424143 aactacattcatttatcaattcctaaactatacatgcaatcatcaaaatgtcaattcatacataaactctaaccacatgca 30424223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 21601037 - 21600990
Alignment:
Q  70 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 117  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  21601037 aaacatattcaaattgtgttcatttgtcaccattcaaaaccacattat 21600990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 24088267 - 24088321
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactat 68  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||| || |||||    
T  24088267 ataattctcataacctaaactaactaaaaaatcaatatacacctaatcaaactat 24088321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 105
Target Start/End: Complemental strand, 3381221 - 3381182
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattca 105  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  3381221 tataaaacatattcaaattgtgttcatttgacaccattca 3381182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 223
Target Start/End: Original strand, 29821737 - 29821821
Alignment:
Q  139 aactaaattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||| |||||||| | |||||||||| ||||||| || | |||||| ||||||||   | ||||||||||||||||| ||||||    
T  29821737 aactacattcatttctaaattcataaattacacatacatttatcaaaatgtcaattcctagatcaaccctaaccacatacaaact 29821821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 150; Significance: 2e-79; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 512408 - 512565
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  512408 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatagacaacaactacattcatttatcaattcataaa 512507  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  512508 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 512565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 19228308 - 19228465
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||    
T  19228308 tataaaacatattcaaattatgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcataaa 19228407  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19228408 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 19228465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 42537586 - 42537429
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  42537586 tataaaacatattcaaattatgttcatttgccaccattcaaagccacattatgattttaacaacataggcaacaactacattcatttatcaattcataaa 42537487  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  42537486 ctacacatgcaatcatcaaattgtcaattttaaaattaaccctaacaacatgcaaact 42537429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 38968535 - 38968377
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattca-aagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataa 164  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  38968535 tataaaacatattcaaattgtgttcatttgccaccattcataagtcacattatgattttaacaacataggcaacaactacattcatttatcaattcataa 38968436  T
Q  165 actacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  38968435 actacacatgcaatcatcaaattgtcaattttaaaataaaccctaaccacatgcaaact 38968377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 7757761 - 7757604
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  7757761 tataaaacatgttcaaattgtgttcatttgccaccattcaaaaccacattataatttaaacaacataggcaacaactacattcatttatcaattcctaaa 7757662  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7757661 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaact 7757604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 42942122 - 42942279
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||| |||| ||||| ||||||||| |||||||||||||||| ||||    
T  42942122 tataaaacatattcaaattatgttcatttgccacaattcaaagccatattatgatttaaacagcataggcaacaactacattcatttatcaattcctaaa 42942221  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42942222 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 42942279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 14325 - 14482
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||| |||||||||||| ||||    
T  14325 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacatttatttatcaattcctaaa 14424  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    |||| ||||||||||||||||| |||||||| ||||||||||||||||||| ||||||    
T  14425 ctacgcatgcaatcatcaaattttcaattttgaaatcaaccctaaccacatacaaact 14482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 8580141 - 8580298
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||| ||||| |||||||||  ||||    
T  8580141 tataaaacatattcaaattgtgttcatttgccaccattcaaagctacattatgatttaaacaacataggcaacaactacattcaattatcaatttctaaa 8580240  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  8580241 ctacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaact 8580298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 8701860 - 8702017
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||| |||| |||||||||||||||||||||    
T  8701860 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatatgcaactactacattcatttatcaattcataaa 8701959  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    |||||||||||||||||||||||||||||     || || ||||||||||||||||||    
T  8701960 ctacacatgcaatcatcaaattgtcaattcatttataaaacctaaccacatgcaaact 8702017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 28877080 - 28876923
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||| ||||||||| ||| | |||||||||  ||||    
T  28877080 tataaaacatattcaaattgtgttcatttgccaccattcaaacccacattatgatttaaacaatataggcaacaactacatttaattatcaatttctaaa 28876981  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    |||||||||||||||||||||| |||||||| || |||||||||||||||| ||||||    
T  28876980 ctacacatgcaatcatcaaattctcaattttgaattcaaccctaaccacatacaaact 28876923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 17658759 - 17658602
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| | ||||||| ||||||||||||||  |||||    
T  17658759 tataaaacatattcaaattgtgttcatttgccaccattcaaaaccacattatgatttaaacaacataggccacaactacattcatttatcaataaataaa 17658660  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||| || ||||||||||||     ||||| ||||||||||| ||||||    
T  17658659 ctacacatgcaatgatgaaattgtcaattcatttatcaaacctaaccacatacaaact 17658602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 28241435 - 28241592
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||| ||||| ||| |||||||||||||| ||||||    
T  28241435 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattataatttaaactacataggcaacatctacattcatttatcaatacataaa 28241534  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||| || ||||||||||||     || || ||||||||||||||||||    
T  28241535 ctacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaact 28241592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 40624550 - 40624716
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatt----------ttaacaacatagacaacaactaaattcatttatc 155  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||          | |||| ||||| ||||||||| |||||||||||    
T  40624550 tataaaacatattcaaattgtgttcatttgtcaccattcaaaaccacattatcattaaacatcatttaaacagcataggcaacaactacattcatttatc 40624649  T
Q  156 aattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  40624650 aattcataaaatacacatgcaatcatcaaattgtcaattttaaaattaaccctaa-cacatgcaaact 40624716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 127 - 223
Target Start/End: Complemental strand, 20422315 - 20422219
Alignment:
Q  127 aacatagacaacaactaaattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||   | ||||||||||||||||||||||||    
T  20422315 aacatagacaacaactacattcatttatcaattcatacactacacatccaatcatcaaattgtcaattcctacatcaaccctaaccacatgcaaact 20422219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 7757912 - 7757856
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  7757912 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactataa 7757856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 42941972 - 42942028
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  42941972 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccagactataa 42942028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 17658910 - 17658854
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  17658910 ataattctcataacctaaactaactaaaaaatcaatatacacttaaccaaactataa 17658854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 28877230 - 28877174
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  28877230 ataattctcgtaacctaaactaactaaaaaatcaaaatacacttaaccaaactataa 28877174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 42537737 - 42537681
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  42537737 ataattctcgtaaccttaactaactaaaaaatcaatatacacttaaccaaactataa 42537681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 8579992 - 8580047
Alignment:
Q  15 taattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  8579992 taattctcgtaacctaaactaactaaaaaatcaaaatacacttaaccaaactataa 8580047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 19040753 - 19040804
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattat 117  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19040753 tataaaacatattcaaattgtgttcatttgccaccattcaaacccacattat 19040804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 512257 - 512313
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||    
T  512257 ataattctcataacctaaactaactaaaaaatcaatatacacttaactaaactataa 512313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 19228157 - 19228213
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| || |||||||    
T  19228157 ataattctcataacctaaactaactaaaaaatcaatatacacttaatcaaactataa 19228213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 38968686 - 38968630
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||| |||||||||||||||| |||||| ||||||||||||||||| |||||||    
T  38968686 ataattcccgtaacctaaactaaccaaaaaaacaatatacacttaaccaaactataa 38968630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 8701709 - 8701765
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    |||||| || |||||||||||||||||| ||||||||||||||||| || |||||||    
T  8701709 ataattttcataacctaaactaactaaacaatcaatatacacttaatcaaactataa 8701765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 28241294 - 28241341
Alignment:
Q  23 gtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    |||||||||||||||||||||||||| ||| ||||||||| |||||||    
T  28241294 gtaacctaaactaactaaaaaatcaaaataaacttaaccaaactataa 28241341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 5197406 - 5197359
Alignment:
Q  70 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 117  Q
    ||||||| ||||| ||||||| |||||||||||||||| |||||||||    
T  5197406 aaacatactcaaaatgtgttcttttgccaccattcaaaaccacattat 5197359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 27673293 - 27673340
Alignment:
Q  70 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 117  Q
    ||||||| ||||| ||||||| |||||||||||||||| |||||||||    
T  27673293 aaacatactcaaaatgtgttcttttgccaccattcaaaaccacattat 27673340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 150; Significance: 2e-79; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 55407423 - 55407580
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  55407423 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacataggcaacaactacattcatttatcaattcataaa 55407522  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55407523 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 55407580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 51683639 - 51683482
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  51683639 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatagacaacaactacattcatttatcaattcataaa 51683540  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51683539 atacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 51683482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 21022524 - 21022681
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  21022524 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaa 21022623  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  21022624 ctacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaact 21022681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 48256207 - 48256364
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||| |||||||||||||||||||||    
T  48256207 tataaaacatattcaaattgttttcatttgccaccattcaaagccacattatgatttaaactacataggcaacaactacattcatttatcaattcataaa 48256306  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  48256307 ctacacatgcaatcatcaaattgtcaattttaaaattaaccctaaccacatgcaaact 48256364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 67 - 223
Target Start/End: Complemental strand, 50275170 - 50275014
Alignment:
Q  67 ataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaac 166  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||| |||||||||||||||| |||||    
T  50275170 ataaaacatattcaaattgtgttcatttgccaccattcaaagccacattctgatttaaacaacataggcaacaactacattcatttatcaattcctaaac 50275071  T
Q  167 tacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  50275070 tacacatgcaatcatcaaattgtcaattttaaaattaaccctaaccacatgcaaact 50275014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 68028 - 67871
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||| ||||||||| ||| |||||||||||||||||    
T  68028 tataaaacatattcaaattgtgttcatttgctaccattcaaagccacattatcatttaaacaacataggcaacaactacatttatttatcaattcataaa 67929  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  67928 ctacacatgcaatcattaaattgtcaattttaaaatcaaccctaaccacatgcaaact 67871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 50901917 - 50901760
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||| ||||    
T  50901917 tataaaacatattcaaattgtgttcatttaacaccattcaaagccacattatgaattaaacaacatagacaacaactacattcatttatcaattcctaaa 50901818  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  50901817 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgtaaact 50901760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 37021719 - 37021876
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||| |||||||||||||||| ||||    
T  37021719 tataaaagatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatatgcaacaactacattcatttatcaattcctaaa 37021818  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  37021819 ctacacatgcaatcatcaaattgtcaattttaaaatcaactctaaccacatacaaact 37021876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 40357916 - 40358073
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||| ||||| |||||||||  ||||    
T  40357916 tataaaacatattcaaactgtgttcatttgccaccattcaaatccacattatgatttaaacaacataggcaacaactacattcaattatcaatttctaaa 40358015  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||    
T  40358016 ctacacatgcaatcatcaaattctcaattttgaaatcaaccctaaccacatacaaact 40358073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 66 - 211
Target Start/End: Complemental strand, 46436681 - 46436536
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||| ||| |||| |||| ||||  ||||||||| |||| ||||| ||||||||||    
T  46436681 tataaaacatattcaaattgtgttcatttgccaccattcagaaccacaatatcatttaaacagcataagcaacaactacattcgtttattaattcataaa 46436582  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaac 211  Q
    |||||||||||||||||||||||||||||||||||| |||||||||    
T  46436581 ctacacatgcaatcatcaaattgtcaattttaaaattaaccctaac 46436536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 66 - 194
Target Start/End: Original strand, 30726377 - 30726505
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||| |||||||||||||| ||||||    
T  30726377 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaactacataggcaacaactacattcatttatcaatacataaa 30726476  T
Q  166 ctacacatgcaatcatcaaattgtcaatt 194  Q
    |||||| |||||| || ||||||||||||    
T  30726477 ctacacgtgcaatgatgaaattgtcaatt 30726505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 1308750 - 1308907
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||  ||||| ||| |||||||||||||| ||||||    
T  1308750 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattataatttaaactacatatgcaacatctacattcatttatcaatacataaa 1308849  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||| || ||||||||||||     || || ||||||||||||||||||    
T  1308850 ctacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaact 1308907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 1089220 - 1089377
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||  ||||| ||| |||||||||||||| ||||||    
T  1089220 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattattatttaaactacatatgcaacatctacattcatttatcaatacataaa 1089319  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    |||||| |||||| || ||||||||||||     || || ||||||||||||||||||    
T  1089320 ctacacttgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaact 1089377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 14297572 - 14297405
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacatt----------atgattttaacaacatagacaacaactaaattcatttatc 155  Q
    ||||||||||| ||||| |||||||||||| ||||||||||| |||||||          || |||| |||||||||| ||||||||| |||||||||||    
T  14297572 tataaaacatactcaaaatgtgttcatttggcaccattcaaaaccacatttttattatacatcatttaaacaacataggcaacaactacattcatttatc 14297473  T
Q  156 aattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||| || ||||||||||||     || || ||||||||||||||||||    
T  14297472 aattcataaactacacatgcaatgatgaaattgtcaattcattcataaaacctaaccacatgcaaact 14297405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 14315821 - 14315654
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacatt----------atgattttaacaacatagacaacaactaaattcatttatc 155  Q
    ||||||||||| ||||| |||||||||||| ||||||||||| |||||||          || |||| |||||||||| ||||||||| |||||||||||    
T  14315821 tataaaacatactcaaaatgtgttcatttggcaccattcaaaaccacatttttattatacatcatttaaacaacataggcaacaactacattcatttatc 14315722  T
Q  156 aattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||| || ||||||||||||     || || ||||||||||||||||||    
T  14315721 aattcataaactacacatgcaatgatgaaattgtcaattcattcataaaacctaaccacatgcaaact 14315654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 70 - 223
Target Start/End: Original strand, 11083646 - 11083809
Alignment:
Q  70 aaacatattcaaattgtgttcatttgccaccattcaaagccacatt----------atgattttaacaacatagacaacaactaaattcatttatcaatt 159  Q
    ||||||| ||||| |||||||||||| ||||||||||| |||||||          || |||| |||| ||||| ||||||||| ||||||||||||||     
T  11083646 aaacatactcaaaatgtgttcatttgacaccattcaaaaccacatttttattatacatcatttaaacagcataggcaacaactacattcatttatcaata 11083745  T
Q  160 cataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||| |||||||||||||||     || |||||||||||||||||||||    
T  11083746 cataaactacacatgcaatgatcaaattgtcaattcattcataaaccctaaccacatgcaaact 11083809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 70 - 223
Target Start/End: Original strand, 21538092 - 21538255
Alignment:
Q  70 aaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatt----------ttaacaacatagacaacaactaaattcatttatcaatt 159  Q
    ||||| |||||||||||||||||||| || |||||||| ||||||||| |||          | |||||||||| ||||||||| |||||||||||||||    
T  21538092 aaacagattcaaattgtgttcatttggcatcattcaaaaccacattatcattaaacatcatttaaacaacataggcaacaactacattcatttatcaatt 21538191  T
Q  160 cataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    |||||||||| ||||||||  ||||||||||||||     || |||||||||||||||||||||    
T  21538192 cataaactacccatgcaatgttcaaattgtcaattcattcataaaccctaaccacatgcaaact 21538255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 10753063 - 10753230
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatt----------ttaacaacatagacaacaactaaattcatttatc 155  Q
    ||||||||||||| |||  |||| |||||||||||||||||| ||||||||| |||          | |||| ||||| ||||| ||| |||||||||||    
T  10753063 tataaaacatatttaaagagtgtccatttgccaccattcaaaaccacattatcattaaacatcatttaaacagcataggcaacatctacattcatttatc 10753162  T
Q  156 aattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    |||||||||||||||||||||||  ||||||||||||||     || |||||||||||||||||||||    
T  10753163 aattcataaactacacatgcaatgttcaaattgtcaattcattcataaaccctaaccacatgcaaact 10753230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 10966832 - 10966999
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatt----------ttaacaacatagacaacaactaaattcatttatc 155  Q
    ||||||||||||| |||  |||| |||||||||||||||||| ||||||||| |||          | |||| ||||| ||||| ||| |||||||||||    
T  10966832 tataaaacatatttaaagagtgtccatttgccaccattcaaaaccacattatcattaaacatcatttaaacagcataggcaacatctacattcatttatc 10966931  T
Q  156 aattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    |||||||||||||||||||||||  ||||||||||||||     || |||||||||||||||||||||    
T  10966932 aattcataaactacacatgcaatgttcaaattgtcaattcattcataaaccctaaccacatgcaaact 10966999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 21022374 - 21022430
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  21022374 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactataa 21022430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 50902067 - 50902011
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  50902067 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactataa 50902011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 51683790 - 51683734
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  51683790 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactataa 51683734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 48256056 - 48256112
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  48256056 ataattctcataacctaaactaactaaaaaatcaatatacacttaaccaaactataa 48256112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 55407272 - 55407328
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  55407272 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaacgaaactataa 55407328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 145 - 223
Target Start/End: Original strand, 4720083 - 4720161
Alignment:
Q  145 attcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||| |||||||||||||||||| |||||||||||| |||||||| | |  | |||||||||||||||||||||    
T  4720083 attcatttaccaattcataaactacacacgcaatcatcaaaatgtcaattcttacgtaaaccctaaccacatgcaaact 4720161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 40357766 - 40357822
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||    
T  40357766 ataattctcgtaacttaaactaactaaaaaatcaaaatacacttaaccaaactataa 40357822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 50275322 - 50275266
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||    
T  50275322 ataattctcgtaacctacactaactaaaaaatcaatatacatttaaccaaactataa 50275266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 41798631 - 41798682
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattat 117  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  41798631 tataaaacatattcaaattgtgttcatttgctaccattcaaacccacattat 41798682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 11050163 - 11050210
Alignment:
Q  70 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 117  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  11050163 aaacatattcaaattgtgttcatttggcaccattcaaaaccacattat 11050210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 1089079 - 1089126
Alignment:
Q  23 gtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    |||||||||||||||||||||||||| ||| ||||||||| |||||||    
T  1089079 gtaacctaaactaactaaaaaatcaaaataaacttaaccaaactataa 1089126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 1308609 - 1308656
Alignment:
Q  23 gtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    |||||||||||||||||||||||||| ||| ||||||||| |||||||    
T  1308609 gtaacctaaactaactaaaaaatcaaaataaacttaaccaaactataa 1308656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 37021563 - 37021601
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatata 52  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  37021563 ataattctcgtaacctaaactaactaaaaaattaatata 37021601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 9892908 - 9892955
Alignment:
Q  70 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 117  Q
    ||||||| ||||| ||||||| |||||||||||||||| |||||||||    
T  9892908 aaacatactcaaaatgtgttcttttgccaccattcaaaaccacattat 9892955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 30726236 - 30726275
Alignment:
Q  23 gtaacctaaactaactaaaaaatcaatatacacttaacca 62  Q
    |||||||||||||||||||||||||| ||| |||||||||    
T  30726236 gtaacctaaactaactaaaaaatcaaaataaacttaacca 30726275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 50023183 - 50023230
Alignment:
Q  70 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 117  Q
    ||||||| ||||| ||||||| |||||||||||||||| |||||||||    
T  50023183 aaacatactcaaaatgtgttcttttgccaccattcaaaaccacattat 50023230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 50030301 - 50030348
Alignment:
Q  70 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 117  Q
    ||||||| ||||| ||||||| |||||||||||||||| |||||||||    
T  50030301 aaacatactcaaaatgtgttcttttgccaccattcaaaaccacattat 50030348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 68108 - 68070
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatata 52  Q
    ||||||||| |||||||||||||||||| ||||||||||    
T  68108 ataattctcataacctaaactaactaaataatcaatata 68070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 223
Target Start/End: Complemental strand, 30704356 - 30704303
Alignment:
Q  170 acatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||| |||| ||||||  || ||||||||||||||| ||||||||    
T  30704356 acatgcaatcatcgaattttcaattccaacatcaaccctaaccacgtgcaaact 30704303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 49165472 - 49165419
Alignment:
Q  64 actataaaacatattcaaattgtgttcatttgccaccattcaaagccacattat 117  Q
    ||||| ||||||| ||||| ||||||  |||||||||||||||| |||||||||    
T  49165472 actatcaaacatactcaaaatgtgttattttgccaccattcaaaaccacattat 49165419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 50
Target Start/End: Complemental strand, 46436761 - 46436725
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaata 50  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  46436761 ataattctcataacctaaactaactaaataatcaata 46436725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 150; Significance: 2e-79; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 35258509 - 35258666
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  35258509 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactaaattcatttatcaattcataaa 35258608  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35258609 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 35258666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 45825313 - 45825156
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  45825313 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacataggcaacaactacattcatttatcaattcataaa 45825214  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45825213 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 45825156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 47502752 - 47502595
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  47502752 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaa 47502653  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  47502652 ttacacatgcaatcatcaaattgtcaattttaaaatcaactctaaccacatgcaaact 47502595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 51321151 - 51320994
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||| |||| ||||||||| |||||||||||||||||||||    
T  51321151 tataaaacatattcaaattgtgttcatttgccactattcaaagtcacattatgatttaaacaatataggcaacaactacattcatttatcaattcataaa 51321052  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51321051 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 51320994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 67 - 223
Target Start/End: Original strand, 19527180 - 19527336
Alignment:
Q  67 ataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaac 166  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||     
T  19527180 ataaaacatattcaaattgtgtccatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcataaaa 19527279  T
Q  167 tacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  19527280 tacacatgcaatcatcaaattgtcaattttaaaatcaaccataaccacatgcaaact 19527336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 23275739 - 23275897
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccacc-attcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataa 164  Q
    |||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||    
T  23275739 tataaaacatattcaaattgtgttcatttgtcacccattcaaagtcacattatgatttaaacaacataggcaacaactacattcatttatcaattcataa 23275838  T
Q  165 actacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  23275839 actacacatgcaatcatcaaattgtcaatttaaaaatcaaccctaaccacatgcaaact 23275897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 31783364 - 31783521
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||| ||| |||||||||||| ||||    
T  31783364 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaagaacataggcaacaactacatttatttatcaattcctaaa 31783463  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31783464 ctacacatacaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaact 31783521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 52802568 - 52802411
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||| ||||||||||||||||  ||||||||||||||||  |||||||||| || |||||||||  ||||||||| |||||||||||||||| ||||    
T  52802568 tataaaagatattcaaattgtgttattttgccaccattcaaaatcacattatgacttaaacaacataagcaacaactacattcatttatcaattcttaaa 52802469  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52802468 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 52802411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 19925179 - 19925022
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||| ||||| ||| |||||||||||||| ||||||    
T  19925179 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattataatttaaactacataggcaacatctacattcatttatcaatacataaa 19925080  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||| || ||||||||||||     || || ||||||||||||||||||    
T  19925079 ctacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaact 19925022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 30890498 - 30890341
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||| ||||| ||| |||||||||||||| ||||||    
T  30890498 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattataatttaaactacataggcaacatctacattcatttatcaatacataaa 30890399  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||| || ||||||||||||     || || ||||||||||||||||||    
T  30890398 ctacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaact 30890341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 49857579 - 49857736
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||| ||||||||| |||||||||||||  ||||||    
T  49857579 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattctcatttaaacaacataggcaacaactacattcatttatcaaaacataaa 49857678  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||| || ||||| ||||||     || || ||||||||||||||||||    
T  49857679 ctacacatgcaatgataaaattatcaattcatttataaaacctaaccacatgcaaact 49857736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 111 - 223
Target Start/End: Original strand, 29622105 - 29622217
Alignment:
Q  111 acattatgattttaacaacatagacaacaactaaattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaa 210  Q
    |||||||||||| |||||||||| ||||||||| ||||| |||||||||  |||||||||||||||||||||||||| |||||||| |||||||||||||    
T  29622105 acattatgatttaaacaacataggcaacaactacattcaattatcaatttctaaactacacatgcaatcatcaaattctcaattttgaaatcaaccctaa 29622204  T
Q  211 ccacatgcaaact 223  Q
    |||||| ||||||    
T  29622205 ccacatacaaact 29622217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 135 - 223
Target Start/End: Complemental strand, 11183549 - 11183461
Alignment:
Q  135 caacaactaaattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  11183549 caacaactacattaatttatcaattcataaactacacatgtaatcatcaaattgtcaattttaaaatcaactctaaccacatgcaaact 11183461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 139 - 223
Target Start/End: Complemental strand, 11196244 - 11196160
Alignment:
Q  139 aactaaattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11196244 aactacattaatttatcaattcataaactacacatgcaatcatcaaaatgtcaattttaaaatcaaccctaaccacatgcaaact 11196160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 31783213 - 31783269
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  31783213 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactataa 31783269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 23275589 - 23275644
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactata 69  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23275589 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactata 23275644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 70 - 221
Target Start/End: Original strand, 17514336 - 17514497
Alignment:
Q  70 aaacatattcaaattgtgttcatttgccaccattcaaagccacattatg----------attttaacaacatagacaacaactaaattcatttatcaatt 159  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||           |||| |||| ||   |||||||||| |||||||||||||||    
T  17514336 aaacatattcaaattgtgttcatttggcaccattcaaaaccacattatacttatacatcatttaaacatcaattacaacaactatattcatttatcaatt 17514435  T
Q  160 cataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaa 221  Q
    ||||||||||||| | |||| ||||| ||||||||     || |||||||||||||||||||    
T  17514436 cataaactacacacgtaatcttcaaaatgtcaattcatttataaaccctaaccacatgcaaa 17514497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 22524461 - 22524407
Alignment:
Q  168 acacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaac 222  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  22524461 acacatgcaatcatcaaattatcaattttaaaatcaaccctaaccacatgcaaac 22524407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 19527028 - 19527084
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  19527028 ataattctcgtaacctacactaactaaaaaatcaatatacacttaaccaaactataa 19527084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 45825465 - 45825409
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  45825465 ataattctcgtaacttaaactaactaaaaaatcaatatacacttaaccaaactataa 45825409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 47502891 - 47502835
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  47502891 ataattcttgtaacctaaactaactaaaaaatcaatatacacttaaccaaactataa 47502835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 35258358 - 35258414
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| || |||||||    
T  35258358 ataattctcataacctaaactaactaaaaaatcaatatacacttaatcaaactataa 35258414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 52802719 - 52802663
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||    
T  52802719 ataattctcttaacctaaactaacaaaaaaatcaatatacacttaaccaaactataa 52802663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 2425113 - 2425168
Alignment:
Q  168 acacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||    
T  2425113 acacatgcaatcatcaaattatcaattttaaaatcaactctaaccacatacaaact 2425168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 19524671 - 19524716
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaa 59  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  19524671 ataattctcgtaacctacactaactaaaaaatcaatatacacttaa 19524716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 19524858 - 19524903
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaa 59  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  19524858 ataattctcgtaacctacactaactaaaaaatcaatatacacttaa 19524903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 19525519 - 19525564
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaa 59  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  19525519 ataattctcgtaacctacactaactaaaaaatcaatatacacttaa 19525564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 19526654 - 19526699
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaa 59  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  19526654 ataattctcgtaacctacactaactaaaaaatcaatatacacttaa 19526699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 19526841 - 19526886
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaa 59  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  19526841 ataattctcgtaacctacactaactaaaaaatcaatatacacttaa 19526886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 51321301 - 51321246
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||    
T  51321301 ataattctcataacctaaactaactaaaaa-tcaatatacacttaaccaaactataa 51321246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 19925320 - 19925273
Alignment:
Q  23 gtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    |||||||||||||||||||||||||| ||| ||||||||| |||||||    
T  19925320 gtaacctaaactaactaaaaaatcaaaataaacttaaccaaactataa 19925273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 30890639 - 30890592
Alignment:
Q  23 gtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    |||||||||||||||||||||||||| ||| ||||||||| |||||||    
T  30890639 gtaacctaaactaactaaaaaatcaaaataaacttaaccaaactataa 30890592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 223
Target Start/End: Original strand, 38127223 - 38127276
Alignment:
Q  170 acatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    |||||||||||||||||| ||||||  || ||||||||||||||| ||||||||    
T  38127223 acatgcaatcatcaaattttcaattccaacatcaaccctaaccacgtgcaaact 38127276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 223
Target Start/End: Complemental strand, 25147676 - 25147573
Alignment:
Q  119 attttaacaacatagacaacaactaaattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgc 218  Q
    |||| ||||||||  ||| |||||| |||||| ||| |  ||||||||||||||||||||||||||| | ||||||   | |||||| ||||||| ||||    
T  25147676 atttaaacaacattcacatcaactacattcatctataacatcataaactacacatgcaatcatcaaagt-tcaattcctacatcaacactaaccagatgc 25147578  T
Q  219 aaact 223  Q
    |||||    
T  25147577 aaact 25147573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 2365669 - 2365622
Alignment:
Q  70 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 117  Q
    ||||||| ||||| ||||||| |||||||||||||||| |||||||||    
T  2365669 aaacatactcaaaatgtgttcttttgccaccattcaaaaccacattat 2365622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 19156448 - 19156401
Alignment:
Q  70 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 117  Q
    ||||||| ||||| ||||||| |||||||||||||||| |||||||||    
T  19156448 aaacatactcaaaatgtgttcttttgccaccattcaaaaccacattat 19156401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 146; Significance: 4e-77; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 20917653 - 20917810
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  20917653 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacataggcaacaactacattcatttatcaattcataaa 20917752  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20917753 ctatacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 20917810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 20926615 - 20926772
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  20926615 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacataggcaacaactacattcatttatcaattcataaa 20926714  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20926715 ctatacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 20926772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 49196083 - 49196240
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  49196083 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacataggcaacaactacattcatttatcaattcataaa 49196182  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  49196183 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccttaaccacatgcaaact 49196240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 42756590 - 42756433
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| || ||||||||||||||||||    
T  42756590 tataaaacatattcaaattgtgttcatttgccaccattcaaagcgacattatgatttaaacaacatagacaacaactacatccatttatcaattcataaa 42756491  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42756490 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 42756433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 50963391 - 50963234
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  50963391 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaa 50963292  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  50963291 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaact 50963234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 4007959 - 4008116
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  4007959 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaa 4008058  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  4008059 ctacacatgcaatcatcgaattgtcaattttaaaatcaaccctaaccacatacaaact 4008116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 42165599 - 42165442
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  42165599 tataaaatatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaa 42165500  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42165499 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaact 42165442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 44230150 - 44229993
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  44230150 tataaaacatattcaaattgtgttcatttgccaccgttcaaagccacattatgttttaaacaacataggcaacaactacattcatttatcaattcctaaa 44230051  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44230050 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 44229993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 48889180 - 48889023
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||    
T  48889180 tataaaacatattcaaattatgttcatttaccaccattcaaagtcacattatgatttaaacaacataggcaacaactacattcatttatcaattcataaa 48889081  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48889080 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 48889023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 51807406 - 51807249
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||  ||||    
T  51807406 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatagacaacaactacattcatttatcaatttctaaa 51807307  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  51807306 ctacacatgcaatcatcaaattgtcaattttaaaatcaatcataaccacatgcaaact 51807249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 30255638 - 30255795
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||| ||||||| |||    
T  30255638 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttagcaattcacaaa 30255737  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  30255738 ctaaacatgcaatcatcaaattgtcaactttaaaatcaaccctaaccacatgcaaact 30255795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 67 - 223
Target Start/End: Original strand, 50216515 - 50216671
Alignment:
Q  67 ataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaac 166  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||     
T  50216515 ataaaacatattcaaattgtgttcatttgccaccattcaaaaccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaat 50216614  T
Q  167 tacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  50216615 tacacatgcaatcatcaaattatcaattttaaaatcaaccctaaccacatgcaaact 50216671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 47073843 - 47074000
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||| |||||||||||||||| ||||    
T  47073843 tataaaatatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaatataggcaacaactacattcatttatcaattcctaaa 47073942  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  47073943 ctacacatgcattcatcaaattgtcaattttaaaatcaaccctaaccacatacaaact 47074000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 3501528 - 3501685
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||| ||||| |||||||||  ||||    
T  3501528 tataaaacatattcaaattgtgttcatttgccaccattcaaacccacattatgatttaaacaacataggcaacaactacattcaattatcaatttctaaa 3501627  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||    
T  3501628 ctacacatgcaatcatcaaattctcaattttgaaatcaaccctaaccacatacaaact 3501685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 70 - 223
Target Start/End: Complemental strand, 597191 - 597038
Alignment:
Q  70 aaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaactac 169  Q
    ||||||| ||||| ||||||| ||||||||||||||||||||||||||||||| |||||||| | ||||||||| |||||||||||||||| ||||||||    
T  597191 aaacataatcaaaatgtgttcttttgccaccattcaaagccacattatgatttaaacaacatgggcaacaactacattcatttatcaattcctaaactac 597092  T
Q  170 acatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  597091 acatgcaatcatcaaattgtcaatatttaaatcaaccctaaccacatgcaaact 597038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 3976143 - 3975986
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||| ||||| ||  |||||  ||||    
T  3976143 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaactacataggcaacaactacattcaattgccaatttctaaa 3976044  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  3976043 ctacacatgcaatcatcaaattgtcaatttttaaatcaaccctaaccacatacaaact 3975986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 42805898 - 42806047
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||    
T  42805898 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatcatttaaacaacatagacaacaactacattcatttatcaattcataaa 42805997  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||| ||||||        |||| |||||||||||||||||||||||||||| ||||||    
T  42805998 ctatacatgc--------aattatcaattttaaaatcaaccctaaccacatacaaact 42806047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 48563364 - 48563223
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||                |  ||||||||||||||| |    
T  48563364 tataaaacatattcaaattgtgttcatttgccaccattcaaagacacattatgatttaaacaac----------------tatatttatcaattcataga 48563281  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  48563280 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccttaaccacatgcaaact 48563223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 3976294 - 3976238
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3976294 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactataa 3976238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 42165750 - 42165694
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  42165750 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactataa 42165694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 44230301 - 44230245
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  44230301 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactataa 44230245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 47073692 - 47073748
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  47073692 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactataa 47073748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 50963541 - 50963486
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactata 69  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  50963541 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactata 50963486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 70 - 223
Target Start/End: Original strand, 31045234 - 31045386
Alignment:
Q  70 aaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaactac 169  Q
    ||||||||||| ||||||||  |||| ||||||||||| ||||||| | | || |||| ||   |||  ||||| |||| |||||||||| |||||||||    
T  31045234 aaacatattcacattgtgttattttgacaccattcaaaaccacatttt-acttaaacatcaattacattaactacattcgtttatcaatttataaactac 31045332  T
Q  170 acatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    |||||||||||||||| ||||||||     || |||||||||||||||||||||    
T  31045333 acatgcaatcatcaaaatgtcaattcattcataaaccctaaccacatgcaaact 31045386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 48889322 - 48889266
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  48889322 ataattctcataacctaaactaactaaaaaatcaatatacacttaaccaaactataa 48889266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 54682025 - 54681977
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaacca 62  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  54682025 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaacca 54681977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 4007808 - 4007864
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| || |||||||    
T  4007808 ataattcttgtaacctaaactaactaaaaaatcaatatacacttaatcaaactataa 4007864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 30255487 - 30255543
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| || |||||||    
T  30255487 ataattctcataacctaaactaactaaaaaatcaatatacacttaatcaaactataa 30255543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 42756739 - 42756683
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| || |||||||    
T  42756739 ataattctcataacctaaactaactaaaaaatcaatatacacttaatcaaactataa 42756683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 48563515 - 48563459
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||    
T  48563515 ataattcttgtaatctaaactaactaaaaaatcaatatacacttaaccaaactataa 48563459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 20917500 - 20917558
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatat--acacttaaccacactataa 70  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||    
T  20917500 ataattctcgtaacctaaactaactaaaaaatcaatatacacacttaaccaaactataa 20917558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 20926462 - 20926520
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatat--acacttaaccacactataa 70  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||    
T  20926462 ataattctcgtaacctaaactaactaaaaaatcaatatacacacttaaccaaactataa 20926520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 49195932 - 49195988
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||| |||||||    
T  49195932 ataattcttgtaagctaaactaactaaaaaatcaatatacaattaaccaaactataa 49195988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 52391036 - 52391083
Alignment:
Q  70 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 117  Q
    ||||||||||||||||||||  |||||||||||||||| |||||||||    
T  52391036 aaacatattcaaattgtgttattttgccaccattcaaaaccacattat 52391083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 42805746 - 42805803
Alignment:
Q  14 ataattctcgtaacctaaactaact-aaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||| ||||||||||||||| ||||||||||||||||| ||| || |||||||    
T  42805746 ataattctcataacctaaactaactaaaaaaatcaatatacacctaatcaaactataa 42805803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 16611510 - 16611463
Alignment:
Q  70 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 117  Q
    ||||||| ||||| ||||||| |||||||||||||||| |||||||||    
T  16611510 aaacatactcaaaatgtgttcttttgccaccattcaaaaccacattat 16611463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 22047743 - 22047790
Alignment:
Q  70 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 117  Q
    ||||||| ||||| ||||||| |||||||||||||||| |||||||||    
T  22047743 aaacatactcaaaatgtgttcttttgccaccattcaaaaccacattat 22047790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 36127869 - 36127822
Alignment:
Q  70 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 117  Q
    ||||||| ||||| ||||||| |||||||||||||||| |||||||||    
T  36127869 aaacatactcaaaatgtgttcttttgccaccattcaaaaccacattat 36127822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 41612800 - 41612753
Alignment:
Q  70 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 117  Q
    ||||||| ||||| ||||||| |||||||||||||||| |||||||||    
T  41612800 aaacatactcaaaatgtgttcttttgccaccattcaaaaccacattat 41612753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 43
Target Start/End: Original strand, 49268753 - 49268782
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaa 43  Q
    ||||||||||||||||||||||||||||||    
T  49268753 ataattctcgtaacctaaactaactaaaaa 49268782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 142; Significance: 1e-74; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 66 - 219
Target Start/End: Original strand, 5303857 - 5304010
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  5303857 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatagacaacaactacattcatttatcaattcataaa 5303956  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgca 219  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5303957 ctacacatgcaatcatgaaattgtcaattttaaaatcaaccctaaccacatgca 5304010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 39846622 - 39846779
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  39846622 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaa 39846721  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39846722 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 39846779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 39602152 - 39601995
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  39602152 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaa 39602053  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  39602052 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaact 39601995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 40076886 - 40077043
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||| |||||||||||||||||||||    
T  40076886 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacagctacattcatttatcaattcataaa 40076985  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40076986 ctacacatataatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 40077043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 41249709 - 41249866
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  41249709 tataaagcatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaa 41249808  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41249809 ctacacatgcaatcatcaaattgtcaattttaaaatctaccctaaccacatgcaaact 41249866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 43188486 - 43188329
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||| ||||    
T  43188486 tataaaacatattcaaatcgtgttcatttgccaccattcaaagccacattatgatttaaacaacatagacaacaactacattcatttattaattcctaaa 43188387  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  43188386 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccataaccacatgcaaact 43188329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 66 - 222
Target Start/End: Original strand, 15036364 - 15036520
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| | ||    
T  15036364 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctgaa 15036463  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaac 222  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  15036464 ctacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaac 15036520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 34822653 - 34822810
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||| |||||||||||||||||   ||||||||||||||||||||||| | |||||||| ||||||||| |||||||||||||||||||||    
T  34822653 tataaaacatatttaaattgtgttcatttgcagtcattcaaagccacattatgatttaaccaacataggcaacaactacattcatttatcaattcataaa 34822752  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34822753 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 34822810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 43211942 - 43211785
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  43211942 tataaaacatattcaaattgtgttcatttcccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaa 43211843  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||    
T  43211842 ctacacatgcaatcatcgaattgtcaattttaaaatcaaccctaagcacatacaaact 43211785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 39252448 - 39252292
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||  ||||||||| |||||||||| ||||| ||||    
T  39252448 tataaaacatattcaaattgtattcatttgccaccattcaaagccacattatgatttaaacaacatatgcaacaactacattcatttattaattcctaaa 39252349  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  39252348 ctacacatgcaatcatcaaattgtcaattttaaaatcaa-cctaaccacatacaaact 39252292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 39938852 - 39939009
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  39938852 tataaaacttattcaaattgtgttcatttgccaccattcaaagccccattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaa 39938951  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||| ||||| |||||||||||| ||||||||||||||||||||||||||||| |||||    
T  39938952 ctatacatgtaatcatcaaattatcaattttaaaatcaaccctaaccacatgtaaact 39939009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 76 - 223
Target Start/End: Complemental strand, 45064668 - 45064521
Alignment:
Q  76 attcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaactacacatgc 175  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||| ||||| |||||||||  ||||||||||||||    
T  45064668 attcaaattgtgttcatttgccaccattcaaagccacattaagatttaaacaacataggcaacaactacattcaattatcaatttctaaactacacatgc 45064569  T
Q  176 aatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  45064568 aatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaact 45064521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 99 - 223
Target Start/End: Original strand, 25864609 - 25864732
Alignment:
Q  99 ccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaa 198  Q
    |||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25864609 ccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcataa-ctacacatgcaatcatcaaattgtcaattttaa 25864707  T
Q  199 aatcaaccctaaccacatgcaaact 223  Q
    |||||||||||||||||||||||||    
T  25864708 aatcaaccctaaccacatgcaaact 25864732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 42485174 - 42485331
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||| ||||| ||| |||||||||||||| ||||||    
T  42485174 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattataatttaaactacataggcaacatctacattcatttatcaatacataaa 42485273  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||| || ||||||||||||     || || ||||||||||||||||||    
T  42485274 ctacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaact 42485331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 70 - 223
Target Start/End: Complemental strand, 24249915 - 24249763
Alignment:
Q  70 aaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaactac 169  Q
    ||||||||||||| |||| ||||||| ||||||||||| ||||||||| | || |||| ||   |||||||||| |||||||||||||||||||||||||    
T  24249915 aaacatattcaaaatgtgctcatttgacaccattcaaaaccacattat-acttaaacatcaattacaacaactacattcatttatcaattcataaactac 24249817  T
Q  170 acatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    |||||||||||||||||||||||||   | ||||||||||||||||||||||||    
T  24249816 acatgcaatcatcaaattgtcaattcctatatcaaccctaaccacatgcaaact 24249763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 66 - 194
Target Start/End: Original strand, 489265 - 489393
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||| ||| |||||| ||||| ||| |||||||||||||| ||||||    
T  489265 tataaaacatatttaaattgtgttcatttgcaaccattcaaagccacattataatttaaactacataggcaacatctacattcatttatcaatacataaa 489364  T
Q  166 ctacacatgcaatcatcaaattgtcaatt 194  Q
    ||||||||||||| || ||||||||||||    
T  489365 ctacacatgcaatgatgaaattgtcaatt 489393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 145 - 223
Target Start/End: Complemental strand, 37327161 - 37327084
Alignment:
Q  145 attcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  37327161 attcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaattaaccctaa-cacatgcaaact 37327084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 2984457 - 2984402
Alignment:
Q  168 acacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2984457 acacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 2984402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 5303706 - 5303762
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5303706 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactataa 5303762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 15036213 - 15036269
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15036213 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactataa 15036269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 43212093 - 43212037
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  43212093 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactataa 43212037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 39252590 - 39252534
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  39252590 ataattctcgtaacctaaactaactaaaaaatcaatatacacttgaccaaactataa 39252534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 40076744 - 40076800
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  40076744 ataattctcataacctaaactaactaaaaaatcaatatacacttaaccaaactataa 40076800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 43188637 - 43188581
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  43188637 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaatcaaactataa 43188581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 160 - 206
Target Start/End: Complemental strand, 35026786 - 35026740
Alignment:
Q  160 cataaactacacatgcaatcatcaaattgtcaattttaaaatcaacc 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  35026786 cataaactacacatgcaatcatcaaattgtcaattttaaaatcaacc 35026740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 66 - 122
Target Start/End: Complemental strand, 37327220 - 37327164
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattt 122  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||    
T  37327220 tataaaacatattcaaattgtgttcatttgccaccattcaaaatcacattatcattt 37327164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 39938701 - 39938757
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| || |||||||    
T  39938701 ataattctcgtaacctacactaactaaaaaatcaatatacacttaatcaaactataa 39938757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 41249574 - 41249630
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| || |||||||    
T  41249574 ataattctcgtaacctacactaactaaaaaatcaatatacacttaatcaaactataa 41249630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 45064818 - 45064762
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||    
T  45064818 ataattctcctaacctaaactaactaaaaaatcaaaatacacttaaccaaactataa 45064762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 34822501 - 34822558
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaa-aatcaatatacacttaaccacactataa 70  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  34822501 ataattctcataacctaaactaactaaaaaaatcaatatacacttaaccaaactataa 34822558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 22495272 - 22495216
Alignment:
Q  138 caactaaattcatttatcaattcataaactacacatgcaatcatcaaattgtcaatt 194  Q
    |||||| |||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  22495272 caactacattcatttatcaattcgtaaactacacatgcaaccatcaaaatgtcaatt 22495216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 70
Target Start/End: Original strand, 39846485 - 39846527
Alignment:
Q  28 ctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  39846485 ctaaactaactaaaaaatcaatatacacttaaccaaactataa 39846527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 489124 - 489171
Alignment:
Q  23 gtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    |||||||||||||||||||||||||| ||| ||||||||| |||||||    
T  489124 gtaacctaaactaactaaaaaatcaaaataaacttaaccaaactataa 489171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 42485024 - 42485071
Alignment:
Q  23 gtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    |||||||||||||||||||||||||| ||| ||||||||| |||||||    
T  42485024 gtaacctaaactaactaaaaaatcaaaataaacttaaccaaactataa 42485071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 35552098 - 35552051
Alignment:
Q  70 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 117  Q
    ||||||| ||||| ||||||| |||||||||||||||| |||||||||    
T  35552098 aaacatactcaaaatgtgttcttttgccaccattcaaaaccacattat 35552051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 50
Target Start/End: Complemental strand, 37327300 - 37327264
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaata 50  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  37327300 ataattctcataacctaaactaactaaataatcaata 37327264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 142; Significance: 1e-74; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 39460965 - 39460808
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||| |||||||||||||||||||||    
T  39460965 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaaaataggcaacaactacattcatttatcaattcataaa 39460866  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39460865 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 39460808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 10517417 - 10517260
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  10517417 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaa 10517318  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10517317 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaact 10517260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 47776771 - 47776614
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  47776771 tataaaacatattcaaattgtgttcatttgtcaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaa 47776672  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47776671 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 47776614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 67 - 223
Target Start/End: Complemental strand, 34738802 - 34738646
Alignment:
Q  67 ataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaac 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||| |||||||||||||||| |||||    
T  34738802 ataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggtaacaactacattcatttatcaattcctaaac 34738703  T
Q  167 tacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34738702 tacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 34738646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 17835513 - 17835356
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  17835513 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaa 17835414  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  17835413 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccttaaccacatacaaact 17835356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 36978035 - 36977878
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||    
T  36978035 tataaaacatattcaaattatgttcatttaccaccattcaaagtcacattatgatttaaacaacataggcaacaactacattcatttatcaattcataaa 36977936  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36977935 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 36977878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 47672721 - 47672878
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||| |    
T  47672721 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcataga 47672820  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
     || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47672821 ttatacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 47672878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 9494431 - 9494588
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||    
T  9494431 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcataaa 9494530  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
     ||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||    
T  9494531 ttacacatgcaaccatcaaattttcaattttaaaatcaacccaaaccacatgcaaact 9494588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 27453255 - 27453412
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||| |||||||||||||||| ||||    
T  27453255 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggtaacaactacattcatttatcaattcctaaa 27453354  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  27453355 ctacacatgcaatcatcaaattgtcaattttgaaatcaactctaaccacatgcaaact 27453412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 37340741 - 37340584
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| || |||||||| ||||||||||||    
T  37340741 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaagtacattcatttttcaattcataaa 37340642  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  37340641 ctacacatgaaatcatcaaattgtcaattttaaaatcaatcctaaccacatccaaact 37340584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 15073864 - 15074021
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||| |||||||||||||| ||||||    
T  15073864 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaactacataggcaacaactacattcatttatcaatacataaa 15073963  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||| || ||||||||||||     || || ||||||||||||||||||    
T  15073964 ctacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaact 15074021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 42507663 - 42507820
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||| |||||||||||||| ||||||    
T  42507663 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaactacataggcaacaactacattcatttatcaatacataaa 42507762  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||| || ||||||| ||||     || || ||||||||||||||||||    
T  42507763 ctacacatgcaatgatgaaattgttaattcatttataaaacctaaccacatgcaaact 42507820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 66 - 194
Target Start/End: Original strand, 14689694 - 14689822
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||| ||||||| |||| |||||||||||||||||||| ||||||||||||||  |||||    
T  14689694 tataaaagatattcaaattgtgtttatttgccactattcaaagctacattatcatttaaacaacatagacaacaactacattcatttatcaataaataaa 14689793  T
Q  166 ctacacatgcaatcatcaaattgtcaatt 194  Q
    ||||||||||||| || ||||||||||||    
T  14689794 ctacacatgcaatgatgaaattgtcaatt 14689822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 134 - 223
Target Start/End: Original strand, 17741162 - 17741251
Alignment:
Q  134 acaacaactaaattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||     || |||||||||||||||||||||    
T  17741162 acaacaactacattcatttatcaattcataaactacacatgcaatcttcaaaatgtcaattcattcataaaccctaaccacatgcaaact 17741251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 17835664 - 17835608
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17835664 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactataa 17835608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 27453104 - 27453160
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27453104 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactataa 27453160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 47776922 - 47776866
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  47776922 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccagactataa 47776866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 36978186 - 36978130
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  36978186 ataattctcataacctaaactaactaaaaaatcaatatacacttaaccaaactataa 36978130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 9494281 - 9494337
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| || |||||||    
T  9494281 ataattctcataacctaaactaactaaaaaatcaatatacacttaatcaaactataa 9494337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 39461116 - 39461060
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||    
T  39461116 ataattcttgtaacctaaactaactaaaacatcaatatacacttaaccaaactataa 39461060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 34738954 - 34738898
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    |||||||||||||| || |||||||||||||||||||||||||||| || |||||||    
T  34738954 ataattctcgtaacttacactaactaaaaaatcaatatacacttaatcaaactataa 34738898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 47672570 - 47672626
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||| || |||||||    
T  47672570 ataattctcataacctaaactaactagaaaatcaatatacacttaatcaaactataa 47672626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 37340892 - 37340836
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||| ||||||||||||||||| |||| ||||||| |||||||| |||||||    
T  37340892 ataattctcataacctaaactaactaacaaattaatatactcttaaccaaactataa 37340836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 15073723 - 15073770
Alignment:
Q  23 gtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    |||||||||||||||||||||||||| ||| ||||||||| |||||||    
T  15073723 gtaacctaaactaactaaaaaatcaaaataaacttaaccaaactataa 15073770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 17741088 - 17741135
Alignment:
Q  70 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 117  Q
    ||||||||||||||||||||||| || ||||||||||| |||||||||    
T  17741088 aaacatattcaaattgtgttcatatggcaccattcaaaaccacattat 17741135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 42507522 - 42507569
Alignment:
Q  23 gtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    |||||||||||||||||||||||||| ||| ||||||||| |||||||    
T  42507522 gtaacctaaactaactaaaaaatcaaaataaacttaaccaaactataa 42507569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 10517549 - 10517512
Alignment:
Q  33 ctaactaaaaaatcaatatacacttaaccacactataa 70  Q
    |||||||||||||||||||||||||||||| |||||||    
T  10517549 ctaactaaaaaatcaatatacacttaaccaaactataa 10517512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 223
Target Start/End: Complemental strand, 41734496 - 41734443
Alignment:
Q  170 acatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    |||||||||||||||||| ||||||  || ||||||||||||||| ||||||||    
T  41734496 acatgcaatcatcaaattttcaattccaacatcaaccctaaccacgtgcaaact 41734443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 556286 - 556333
Alignment:
Q  70 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 117  Q
    ||||||| ||||| | |||||||||||||||||||||| |||||||||    
T  556286 aaacatactcaaaatatgttcatttgccaccattcaaaaccacattat 556333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 62
Target Start/End: Original strand, 14689553 - 14689591
Alignment:
Q  24 taacctaaactaactaaaaaatcaatatacacttaacca 62  Q
    |||| ||||||||||||| ||||||||||||||||||||    
T  14689553 taacataaactaactaaataatcaatatacacttaacca 14689591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 134; Significance: 7e-70; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 7185466 - 7185309
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  7185466 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaa 7185367  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7185366 caacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaact 7185309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 21998627 - 21998470
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||  ||||    
T  21998627 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatagacaacaaataaattcaattatcaattactaaa 21998528  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21998527 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaact 21998470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 25965257 - 25965100
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||  |||||||| |||||||||||||||| ||||    
T  25965257 tataaaacatattcaaattgtgttcatttgccaacattcaaagccacattatgatttaaacaacataggaaacaactacattcatttatcaattcctaaa 25965158  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25965157 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 25965100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 39948037 - 39947880
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  39948037 tataaaacatattcaaattgtgttcttttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaa 39947938  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  39947937 ctacacatgcaatcatcgaattgtcaattttaaaatcaaccctaaccacatacaaact 39947880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 28469078 - 28468921
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| || ||||| |||||||||  ||||    
T  28469078 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaattacattcaattatcaatttctaaa 28468979  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  28468978 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaact 28468921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 32955990 - 32956147
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||| || |||||||||||||||| ||||    
T  32955990 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattataatttaaacaacataggcaacaagtacattcatttatcaattcctaaa 32956089  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  32956090 ctacacatgcaatcatcaaattgtcaattttaaaatcaacccaaaccacatacaaact 32956147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 17421004 - 17420847
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||| ||||| | |||||||  ||||    
T  17421004 tataaaacatattcaaattgtgttcatttgccaccattcaaacccacattatgatttaaacaacataggcaacaactacattcaatgatcaatttctaaa 17420905  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  17420904 ctacacatgcaatcatcaaattctcaattttgaaatcaaccctaaccacatgcaaact 17420847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 45429028 - 45428871
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||| ||||||||| ||||| |||||||||  ||||    
T  45429028 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaactacgtaggcaacaactacattcaattatcaatttctaaa 45428929  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||    
T  45428928 ctacacatgcaatcatcaaattgtcattttttaaatcaaccctaaccacatacaaact 45428871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 101 - 223
Target Start/End: Original strand, 45137103 - 45137225
Alignment:
Q  101 attcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaa 200  Q
    |||||| ||||||||||||||| || ||||||| ||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  45137103 attcaaggccacattatgatttaaataacataggcaagaactacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaa 45137202  T
Q  201 tcaaccctaaccacatgcaaact 223  Q
    |||||| ||||||||||||||||    
T  45137203 tcaaccttaaccacatgcaaact 45137225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 39948188 - 39948132
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  39948188 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactataa 39948132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 45429178 - 45429122
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45429178 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccaaactataa 45429122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 134 - 223
Target Start/End: Complemental strand, 31367398 - 31367309
Alignment:
Q  134 acaacaactaaattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||| ||||||||||||| ||||||||||||| | |||||||||||||| | ||||||   | ||||||||||||||||||||||||    
T  31367398 acaacaaataaattcatttataaattcataaactatatatgcaatcatcaaaatatcaattcctacatcaaccctaaccacatgcaaact 31367309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 22686966 - 22686910
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  22686966 ataattctcgtaacctaaactaactaaaaaatcaaaatacacttaaccaaactataa 22686910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 28469228 - 28469172
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  28469228 ataattctcgtaacctaaactaactaaaaaatcaaaatacacttaaccaaactataa 28469172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 45136788 - 45136844
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  45136788 ataattctcgtaacctaaactaactaaaaaatcaatatacatttaaccaaactataa 45136844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 32955844 - 32955888
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatatacactta 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  32955844 ataattctcgtaacctaaactaactaaaaaatcaatatacactta 32955888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 139 - 223
Target Start/End: Original strand, 35464313 - 35464397
Alignment:
Q  139 aactaaattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||| |||||||||| |||||||||||||||||||||||||||| | ||||||||   | || || ||||||||||||||||||    
T  35464313 aactacattcatttataaattcataaactacacatgcaatcatcagaatgtcaattcatacataaatcctaaccacatgcaaact 35464397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 17421145 - 17421098
Alignment:
Q  23 gtaacctaaactaactaaaaaatcaatatacacttaaccacactataa 70  Q
    |||||||||||||||||||||||||| ||| ||||||||| |||||||    
T  17421145 gtaacctaaactaactaaaaaatcaaaataaacttaaccaaactataa 17421098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 20938329 - 20938282
Alignment:
Q  70 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 117  Q
    ||||||| ||||| ||||||| |||||||||||||||| |||||||||    
T  20938329 aaacatactcaaaatgtgttcttttgccaccattcaaaaccacattat 20938282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 29401244 - 29401291
Alignment:
Q  70 aaacatattcaaattgtgttcatttgccaccattcaaagccacattat 117  Q
    ||||||| ||||| ||||||| |||||||||||||||| |||||||||    
T  29401244 aaacatactcaaaatgtgttcttttgccaccattcaaaaccacattat 29401291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 223
Target Start/End: Original strand, 25515549 - 25515602
Alignment:
Q  170 acatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    |||||||||||||||| | ||||||   | ||||||||||||||||||||||||    
T  25515549 acatgcaatcatcaaaatttcaattcctacatcaaccctaaccacatgcaaact 25515602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 130; Significance: 2e-67; HSPs: 2)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 7855 - 7698
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||    
T  7855 tataaaacatattcaaattgtgttcatttgccatcattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaa 7756  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  7755 ctacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaact 7698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 50
Target Start/End: Complemental strand, 7935 - 7899
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaata 50  Q
    |||||||||||||||||||||||||||||||||||||    
T  7935 ataattctcgtaacctaaactaactaaaaaatcaata 7899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 130; Significance: 2e-67; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 15259 - 15416
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||| |||||||||||||||  ||||    
T  15259 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattcatttatcaatttctaaa 15358  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15359 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaact 15416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 15107 - 15164
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaa-aatcaatatacacttaaccacactataa 70  Q
    |||||||| ||||||||||||||| |||| |||||||||||||||||||| |||||||    
T  15107 ataattcttgtaacctaaactaaccaaaaaaatcaatatacacttaaccaaactataa 15164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 122; Significance: 9e-63; HSPs: 2)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 364 - 521
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaa 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||| ||||| |||||||||  ||||    
T  364 tataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaactacataggcaacaactacattcaattatcaatttctaaa 463  T
Q  166 ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  464 ctacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaact 521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 233 - 270
Alignment:
Q  33 ctaactaaaaaatcaatatacacttaaccacactataa 70  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  233 ctaactaaaaaatcaaaatacacttaaccaaactataa 270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 88; Significance: 2e-42; HSPs: 3)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 124 - 223
Target Start/End: Complemental strand, 8582 - 8483
Alignment:
Q  124 aacaacatagacaacaactaaattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    |||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8582 aacaacataggcaacaactacattcatttatcaattcataaactatacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 8483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 96
Target Start/End: Complemental strand, 10791 - 10761
Alignment:
Q  66 tataaaacatattcaaattgtgttcatttgc 96  Q
    |||||||||||||||||||||||||||||||    
T  10791 tataaaacatattcaaattgtgttcatttgc 10761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 10871 - 10833
Alignment:
Q  14 ataattctcgtaacctaaactaactaaaaaatcaatata 52  Q
    ||||||||| |||||||||||||||||| ||||||||||    
T  10871 ataattctcataacctaaactaactaaataatcaatata 10833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 223
Target Start/End: Original strand, 251116 - 251268
Alignment:
Q  70 aaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacatagacaacaactaaattcatttatcaattcataaactac 169  Q
    ||||||||||  |||||||| ||||| ||||||||||| ||||||| |  ||  |||| ||   ||| |||||| |||||||||||||||||||||||||    
T  251116 aaacatattcttattgtgttaatttgacaccattcaaaaccacattcttctta-aacatcaattacatcaactacattcatttatcaattcataaactac 251214  T
Q  170 acatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    ||||||||| |||||| || |||||   |  | ||||||||||| |||||||||    
T  251215 acatgcaattatcaaaatgccaattcatacgtaaaccctaaccatatgcaaact 251268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 145 - 223
Target Start/End: Original strand, 40750 - 40828
Alignment:
Q  145 attcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaact 223  Q
    |||||||||||||| ||||||||||||||||||| || ||||||||||||     || || ||||||||||||||||||    
T  40750 attcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaact 40828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 116
Target Start/End: Original strand, 18573 - 18619
Alignment:
Q  70 aaacatattcaaattgtgttcatttgccaccattcaaagccacatta 116  Q
    ||||||| ||||| ||||||| |||||||||||||||| ||||||||    
T  18573 aaacatactcaaaatgtgttcttttgccaccattcaaaaccacatta 18619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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