View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18980_low_2 (Length: 444)
Name: NF18980_low_2
Description: NF18980
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18980_low_2 |
 | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0475 (1 HSPs) |
| | |
|
| [»] scaffold0199 (1 HSPs) |
| | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 411; Significance: 0; HSPs: 32)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 411; E-Value: 0
Query Start/End: Original strand, 1 - 423
Target Start/End: Complemental strand, 3173580 - 3173158
Alignment:
| Q |
1 |
tgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3173580 |
tgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactt |
3173481 |
T |
|
| Q |
101 |
tagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
3173480 |
tagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttaac |
3173381 |
T |
|
| Q |
201 |
tttgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactttcatc |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3173380 |
tttgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactttcatc |
3173281 |
T |
|
| Q |
301 |
gcttttttcgtgaactttttgctaaacttcatgattctgcaacttctggtcttatacctccagttacttgctttgtttccgattgctatatgccatttac |
400 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3173280 |
gcttttttcgtgaactttttgctaaacttcacgattctgcaactgctggtcttatacctccagttacttgctttgtttccgattgctatatgccatttac |
3173181 |
T |
|
| Q |
401 |
agtagatgttgctgaagaacatg |
423 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
3173180 |
agtagatgttgctgaagaacatg |
3173158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 423
Target Start/End: Original strand, 4488748 - 4489170
Alignment:
| Q |
1 |
tgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactt |
100 |
Q |
| |
|
|||||||||||| | ||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| | |
|
|
| T |
4488748 |
tgagtaactttgaagagagaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcacct |
4488847 |
T |
|
| Q |
101 |
tagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacc |
200 |
Q |
| |
|
|||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| | |||||||| | |
|
|
| T |
4488848 |
tagaggatttcacataacctttgtcaacactgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttaactgattttagc |
4488947 |
T |
|
| Q |
201 |
tttgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactttcatc |
300 |
Q |
| |
|
||||||||||| ||||||||||||||| ||| || |||||||| |||||||||||||| |||||||||||||||| ||||||||| || || ||||| | |
|
|
| T |
4488948 |
tttgagactattccagatggtttaactccaacagatggtgatggcgatgttagtcaagatttacgcgctctttgtctatcaatcatgaacaattttcacc |
4489047 |
T |
|
| Q |
301 |
gcttttttcgtgaactttttgctaaacttcatgattctgcaacttctggtcttatacctccagttacttgctttgtttccgattgctatatgccatttac |
400 |
Q |
| |
|
|| ||| ||| | || ||||||||||| |||| ||||| ||| |||||||||| ||||||||||||||||| ||||| |||||| ||||| ||||||| |
|
|
| T |
4489048 |
aattctttggtgtatttcttgctaaacttaatgactctgctactgctggtcttatccctccagttacttgcttagtttctgattgcaatatggcatttac |
4489147 |
T |
|
| Q |
401 |
agtagatgttgctgaagaacatg |
423 |
Q |
| |
|
|||||||| |||||||||||||| |
|
|
| T |
4489148 |
agtagatgctgctgaagaacatg |
4489170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 423
Target Start/End: Complemental strand, 4576032 - 4575610
Alignment:
| Q |
1 |
tgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactt |
100 |
Q |
| |
|
|||||||||||| | ||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||| | |
|
|
| T |
4576032 |
tgagtaactttgaagagaaaaagccacatgcagtgttaactccatttccagttcaaggccatatcaatgcattgttgaaaatagcaaaactgcttcacct |
4575933 |
T |
|
| Q |
101 |
tagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacc |
200 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||| ||| |||| | |
|
|
| T |
4575932 |
tagaggctttcacataacctttgttaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcactgactttaac |
4575833 |
T |
|
| Q |
201 |
tttgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactttcatc |
300 |
Q |
| |
|
||||||||||||||||||||||||||| ||| ||| ||| |||||||||| ||||||||| ||| | ||||| || ||||||||| | |||||||| | |
|
|
| T |
4575832 |
tttgagactataccagatggtttaactccaaaggatggtaatggtgatgtaagtcaagacctacactctcttggtgaatcaatcataacgaactttcgcc |
4575733 |
T |
|
| Q |
301 |
gcttttttcgtgaactttttgctaaacttcatgattctgcaacttctggtcttatacctccagttacttgctttgtttccgattgctatatgccatttac |
400 |
Q |
| |
|
||| ||| ||||||| ||||||||||||| || ||||| ||| |||||||||| || ||||| |||||||| ||||| |||||||| ||||||||||| |
|
|
| T |
4575732 |
acttctttgatgaacttcttgctaaacttcaagactctgccactgctggtcttatccccccagtcacttgcttagtttctgattgctacatgccatttac |
4575633 |
T |
|
| Q |
401 |
agtagatgttgctgaagaacatg |
423 |
Q |
| |
|
|||||||| |||||||||||||| |
|
|
| T |
4575632 |
agtagatgctgctgaagaacatg |
4575610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 423
Target Start/End: Complemental strand, 4482442 - 4482020
Alignment:
| Q |
1 |
tgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactt |
100 |
Q |
| |
|
|||||||||||||| | | |||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||| ||| ||||||||||||| | |
|
|
| T |
4482442 |
tgagtaactttgcagaaaaaaaaccacatgcagtgttgactccatttccagctcaaggccatatcaatgcattgttgaaaataggaaaactacttcacct |
4482343 |
T |
|
| Q |
101 |
tagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacc |
200 |
Q |
| |
|
|||||||||||||||||||||||| ||||| ||||||||||||||||| ||||| ||||||| ||||||||| |||||||||||||||| |||||||||| |
|
|
| T |
4482342 |
tagaggctttcacataacctttgtcaacaccgaatacaatcacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacc |
4482243 |
T |
|
| Q |
201 |
tttgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactttcatc |
300 |
Q |
| |
|
||||| || |||||||||||||||||| |||| |||||||||| ||| || |||||||||||| | ||||| || ||||||||| | |||||||| | |
|
|
| T |
4482242 |
tttgaaacgataccagatggtttaactccaattgaaggtgatgatgaagtaagtcaagacttattctctcttactcaatcaatcatgacgaactttcgcc |
4482143 |
T |
|
| Q |
301 |
gcttttttcgtgaactttttgctaaacttcatgattctgcaacttctggtcttatacctccagttacttgctttgtttccgattgctatatgccatttac |
400 |
Q |
| |
|
||| ||| |||| || | |||||||||||||| ||||| ||| ||||| |||| || ||||| |||||||| ||||| |||||||| ||||||||||| |
|
|
| T |
4482142 |
acttctttgatgaatttctggctaaacttcatgaatctgccactgctggtattatccccccagtcacttgcttagtttctgattgctacatgccatttac |
4482043 |
T |
|
| Q |
401 |
agtagatgttgctgaagaacatg |
423 |
Q |
| |
|
|||||||| ||| |||||||||| |
|
|
| T |
4482042 |
agtagatgctgccgaagaacatg |
4482020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 36 - 423
Target Start/End: Complemental strand, 4562204 - 4561817
Alignment:
| Q |
36 |
ttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagaggctttcacataa-cctttgtaaacactgaa |
134 |
Q |
| |
|
|||||||||| |||||||||||| ||||||||||||||||||||| |||||||||| |||||| | |||||||||||||||| ||||||| ||||||||| |
|
|
| T |
4562204 |
ttaactccatttccagttcaaggtcatatcaatgcattgttgaaaatagcaaaactgcttcacctaagaggctttcacataaacctttgttaacactgaa |
4562105 |
T |
|
| Q |
135 |
tacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacctttgagactataccagatggtttaacttcaatgg |
234 |
Q |
| |
|
|||||||||||||| ||||| ||||||| ||| |||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||| ||| || |
|
|
| T |
4562104 |
tacaatcacaaacgtttgct-aaatcaagaggtgaaaatgcctttgatggtttcactgactttaactttgagactataccagatggtttaactccaaagg |
4562006 |
T |
|
| Q |
235 |
aaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactttcatcgcttttttcgtgaactttttgctaaacttcatga |
334 |
Q |
| |
|
| |||||||||||| ||||||||||| ||| | ||||| || ||||||||| | ||||||||| | ||| ||| ||||||| ||||||||||||| || |
|
|
| T |
4562005 |
atggtgatggtgatattagtcaagacctacactctcttggtgaatcaatcataacgaactttcaccacttctttgatgaacttcttgctaaacttcaaga |
4561906 |
T |
|
| Q |
335 |
ttctgcaacttctggtcttatacctccagttacttgctttgtttccgattgctatatgccatttacagtagatgttgctgaagaacatg |
423 |
Q |
| |
|
||||| ||| |||||||||| || ||||| |||||||| ||||| |||||||| |||||||||||||||| || |||||||||||||| |
|
|
| T |
4561905 |
ctctgccactgctggtcttatccccccagtcacttgcttagtttctgattgctacatgccatttacagtagctgctgctgaagaacatg |
4561817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 100 - 422
Target Start/End: Original strand, 4502943 - 4503265
Alignment:
| Q |
100 |
ttagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttac |
199 |
Q |
| |
|
||||||| ||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
4502943 |
ttagaggatttcacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcaatgattttac |
4503042 |
T |
|
| Q |
200 |
ctttgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactttcat |
299 |
Q |
| |
|
||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| | || |||||||| ||||| ||||| |
|
|
| T |
4503043 |
ctttgagaccataccagatggtttaactccggtggaaggtgatggtgatgttagtcaagacttacgcgctctctatctatcaatcaagaagaattttcac |
4503142 |
T |
|
| Q |
300 |
cgcttttttcgtgaactttttgctaaacttcatgattctgcaacttctggtcttatacctccagttacttgctttgtttccgattgctatatgccattta |
399 |
Q |
| |
|
| || ||| ||||| || ||| ||||||| |||| ||||| ||| |||||||||| ||||||||||||||||| ||||| |||||| | ||||||||| |
|
|
| T |
4503143 |
caattctttggtgaatttcttgttaaacttaatgactctgccactgctggtcttatccctccagttacttgcttagtttctgattgcaacatgccatttc |
4503242 |
T |
|
| Q |
400 |
cagtagatgttgctgaagaacat |
422 |
Q |
| |
|
||||| ||| ||||||||||||| |
|
|
| T |
4503243 |
cagtatatgctgctgaagaacat |
4503265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 20 - 371
Target Start/End: Complemental strand, 4558683 - 4558332
Alignment:
| Q |
20 |
aaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagaggctttcacataacc |
119 |
Q |
| |
|
|||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||| |||||||||||| |
|
|
| T |
4558683 |
aaaaccacatgctgtgttaattccatatccagttcaaggccatatcaatccattgttgaaactagcaaaacttcttcaccttagaggatttcacataacc |
4558584 |
T |
|
| Q |
120 |
tttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacctttgagactataccagatg |
219 |
Q |
| |
|
| |||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||| |||||||||||| || |||| |
|
|
| T |
4558583 |
tatgtaaacactgaatacaaccacaaacggttgctcaagtcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccggatg |
4558484 |
T |
|
| Q |
220 |
gtttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactttcatcgcttttttcgtgaactttt |
319 |
Q |
| |
|
|||||||| ||| ||| |||||||| ||||||||||||||| | |||||||||| |||||||| |||||||| | | ||| || |||||| | |
|
|
| T |
4558483 |
gtttaactccaacggatggtgatggcgatgttagtcaagacatttacgctctttgtaaatcaatcagaaagaacttcctacaacctttccgcgaacttct |
4558384 |
T |
|
| Q |
320 |
tgctaaacttcatgattctgcaacttctggtcttatacctccagttacttgc |
371 |
Q |
| |
|
||||| ||| |||| |||||||| ||||||||| | ||||||||||||||| |
|
|
| T |
4558383 |
tgctagactaaatgactctgcaacatctggtcttgtccctccagttacttgc |
4558332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 1 - 423
Target Start/End: Complemental strand, 4627730 - 4627305
Alignment:
| Q |
1 |
tgagtaactttgcaaagagaa---aaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttca |
97 |
Q |
| |
|
||||||||||||||||||||| | |||||||| ||||| | ||||| |||| ||||||||||||||||| ||||||||| |||||||||| ||||||| |
|
|
| T |
4627730 |
tgagtaactttgcaaagagaatcaagccacatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaattacttca |
4627631 |
T |
|
| Q |
98 |
ctttagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgatttt |
197 |
Q |
| |
|
| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||| |||||||| |
|
|
| T |
4627630 |
ccttagaggctttcacataacctttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgatttt |
4627531 |
T |
|
| Q |
198 |
acctttgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactttc |
297 |
Q |
| |
|
||||||||||| ||||||||||||||||| || | ||||||||||| ||||||| ||||||| ||| |||||| | |||||| | |||||||| | |
|
|
| T |
4627530 |
acctttgagaccataccagatggtttaacaccactagaaggtgatggcgatgttactcaagacataccatctctttcccaatcaataagaaagaacttcc |
4627431 |
T |
|
| Q |
298 |
atcgcttttttcgtgaactttttgctaaacttcatgattctgcaacttctggtcttatacctccagttacttgctttgtttccgattgctatatgccatt |
397 |
Q |
| |
|
|| ||| |||||||| |||||||||||||||| || || ||| |||||||| | | |||||||||||||| ||||| ||||| | ||| |||| |
|
|
| T |
4627430 |
ttcagccctttggtgaacttcttgctaaacttcatgactcagccactgctggtcttgttgcaccagttacttgcttagtttcagattgtttaatgtcatt |
4627331 |
T |
|
| Q |
398 |
tacagtagatgttgctgaagaacatg |
423 |
Q |
| |
|
||| || | | |||||||||||||| |
|
|
| T |
4627330 |
taccatacaagctgctgaagaacatg |
4627305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 20 - 370
Target Start/End: Complemental strand, 4587190 - 4586840
Alignment:
| Q |
20 |
aaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagaggctttcacataacc |
119 |
Q |
| |
|
|||||| ||||| ||||||| |||| |||||||||||||||||||||| |||||||||||||||| ||||| |||||| || |||| |||||||||||| |
|
|
| T |
4587190 |
aaaacctcatgctgtgttaatcccatctccagttcaaggccatatcaatccattgttgaaactagctaaacttcttcaccttcgaggatttcacataacc |
4587091 |
T |
|
| Q |
120 |
tttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacctttgagactataccagatg |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || |||| | ||||||||||||||||| ||| | |||||||| |||||||||||| ||||||| |
|
|
| T |
4587090 |
tttgtaaacactgaatacaatcacaaacggttgcttaagtcaagagctccaaatgcctttgatgatttaactgattttagctttgagactattccagatg |
4586991 |
T |
|
| Q |
220 |
gtttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactttcatcgcttttttcgtgaactttt |
319 |
Q |
| |
|
|||||||| ||| ||| |||||||||||||||||||||||| | |||||||||| |||||||| |||||||| | | ||| || |||||| | |
|
|
| T |
4586990 |
gtttaactccaacggatggtgatggtgatgttagtcaagacatttacgctctttgtaaatcaatcagaaagaacttcctacaacctttccgcgaacttct |
4586891 |
T |
|
| Q |
320 |
tgctaaacttcatgattctgcaacttctggtcttatacctccagttacttg |
370 |
Q |
| |
|
||||| |||| |||| |||||||| ||||||||||| |||||||| ||||| |
|
|
| T |
4586890 |
tgctagacttaatgactctgcaacatctggtcttatccctccagtcacttg |
4586840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 24 - 260
Target Start/End: Complemental strand, 4517894 - 4517658
Alignment:
| Q |
24 |
ccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagaggctttcacataacctttg |
123 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||||||||||||||| | ||||| |||||||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
4517894 |
ccacatgcagtgataactccatatccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcatcttagaggctttcacataacctttg |
4517795 |
T |
|
| Q |
124 |
taaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacctttgagactataccagatggttt |
223 |
Q |
| |
|
| ||||| ||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
4517794 |
tcaacaccgaatacaatcacaaacgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggttt |
4517695 |
T |
|
| Q |
224 |
aacttcaatggaaggtgatggtgatgttagtcaagac |
260 |
Q |
| |
|
|||| | || ||||| ||||||||||||||||||||| |
|
|
| T |
4517694 |
aactccgatagaaggcgatggtgatgttagtcaagac |
4517658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 4507488 - 4507227
Alignment:
| Q |
1 |
tgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactt |
100 |
Q |
| |
|
||||||| ||||||||||||||||||||||| ||||| | |||||||||| |||||||||||||||| ||||||| |||||||| || || |||||| | |
|
|
| T |
4507488 |
tgagtaattttgcaaagagaaaaccacatgctgtgttgattccatatccaactcaaggccatatcaatccattgttcaaactagctaagcttcttcacct |
4507389 |
T |
|
| Q |
101 |
tagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacc |
200 |
Q |
| |
|
| |||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||| |||||||| | |
|
|
| T |
4507388 |
tcgaggctttcacataacctttgttaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtgaaaatgcctttgatggtttcactgattttaac |
4507289 |
T |
|
| Q |
201 |
tttgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaagactt |
262 |
Q |
| |
|
||||||||| ||||||||||||||||| ||||||| |||||||||||||||| || |||||| |
|
|
| T |
4507288 |
tttgagactctaccagatggtttaactccaatggatggtgatggtgatgttaatccagactt |
4507227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 20 - 367
Target Start/End: Original strand, 4612288 - 4612641
Alignment:
| Q |
20 |
aaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagaggctttcacataacc |
119 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||| |||| | |||||||||||||| |||||| ||||||||||||||||||| |
|
|
| T |
4612288 |
aaaaccacatgcagtgttaattccatatccagttcaaggccatatcaatccattaatcaaactagcaaaacttcttcaccttagaggctttcacataaca |
4612387 |
T |
|
| Q |
120 |
tttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacctttgagactataccagatg |
219 |
Q |
| |
|
|| || ||||| ||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||| |||||||||||||||| |||||||||||| |
|
|
| T |
4612388 |
ttcgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgttggtttcactgattttacctttgaggctataccagatg |
4612487 |
T |
|
| Q |
220 |
gtttaacttcaatggaa------ggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactttcatcgcttttttcgtga |
313 |
Q |
| |
|
|| || |||||| ||| |||||||||||||||||||||||| || ||||||||| |||||||| |||||||| | | |||||| || |
|
|
| T |
4612488 |
gtctaccttcaaacgaaggcgatggtgatggtgatgttagtcaagacatatatgctctttgtgaatcaatcagaaagaacttcctacaaccttttcgcga |
4612587 |
T |
|
| Q |
314 |
actttttgctaaacttcatgattctgcaacttctggtcttatacctccagttac |
367 |
Q |
| |
|
|||| || ||| |||| |||| ||||| |||||||||||| | ||||| ||||| |
|
|
| T |
4612588 |
acttatttctagacttaatgactctgccacttctggtcttgtccctccggttac |
4612641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 24 - 423
Target Start/End: Complemental strand, 4623861 - 4623462
Alignment:
| Q |
24 |
ccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagaggctttcacataacctttg |
123 |
Q |
| |
|
|||||||| ||||| | | |||||||||||||||| ||||||||| ||||||| ||||||||||| || ||| || ||| |||||||||||||||||||| |
|
|
| T |
4623861 |
ccacatgctgtgttgattgcatatccagttcaaggtcatatcaatccattgttcaaactagcaaagcttctttaccttaaaggctttcacataacctttg |
4623762 |
T |
|
| Q |
124 |
taaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacctttgagactataccagatggttt |
223 |
Q |
| |
|
|||| ||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||| || |||| ||||||||| || ||||||||||| |
|
|
| T |
4623761 |
gtcacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaggcctttgatggtttcacggactttaactttgagaccattccagatggttt |
4623662 |
T |
|
| Q |
224 |
aacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaa---ctttcatcgcttttttcgtgaacttttt |
320 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||| ||| | |||||| | ||||| | ||||| || ||||| ||||| |||||||| || |
|
|
| T |
4623661 |
aacaccaatggaaggtgatggtgatgttagtcaagacataccctctctttctgattcaataaggaagaatttctatcatccctttt---gtgaacttctt |
4623565 |
T |
|
| Q |
321 |
gctaaacttcatgattctgcaacttctggtcttatacctccagttacttgctttgtttccgattgctatatgccatttacagtagatgttgctgaagaac |
420 |
Q |
| |
|
|| ||||||||||| ||||| ||| |||||||| | || |||||||||||||| ||||||||||| || ||| |||||||| || | | ||||||||| | |
|
|
| T |
4623564 |
gcaaaacttcatgactctgccactgctggtcttgttccaccagttacttgcttagtttccgattgttacatgtcatttacaatacaagctgctgaagagc |
4623465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 6 - 259
Target Start/End: Complemental strand, 4618873 - 4618620
Alignment:
| Q |
6 |
aactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagag |
105 |
Q |
| |
|
||||||||||| ||||||||||||| ||| | | |||||||||||||||||||||||||||| ||||||| ||||||||||| || |||||| |||||| |
|
|
| T |
4618873 |
aactttgcaaacagaaaaccacatgttgtgatgattccatatccagttcaaggccatatcaatccattgttcaaactagcaaagcttcttcaccttagag |
4618774 |
T |
|
| Q |
106 |
gctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacctttga |
205 |
Q |
| |
|
||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| |||||||| || ||||||||||||| || |||| |||||| |
|
|
| T |
4618773 |
gctttcacataacctttgttaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaggcttttgatggtttcacggactttaactttga |
4618674 |
T |
|
| Q |
206 |
gactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaaga |
259 |
Q |
| |
|
|| || |||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
4618673 |
gagcattccagatggtttaacaccaatggaaggtgatggtgatgttagtcaaga |
4618620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 20 - 371
Target Start/End: Complemental strand, 4572524 - 4572173
Alignment:
| Q |
20 |
aaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagaggctttcacataacc |
119 |
Q |
| |
|
|||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||| | |||||| ||||||| |||||||||||| |
|
|
| T |
4572524 |
aaaaccacatgctgtgttaatcccatatccagttcaaggccatatcaatccattgttgcaactagcaaaatttcttcaccttagaggttttcacataacc |
4572425 |
T |
|
| Q |
120 |
tttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacctttgagactataccagatg |
219 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||| |||||| |||||||| ||| ||||||| |
|
|
| T |
4572424 |
tatgtaaacactgaatacaatcacaaacggttgctcaagtcaagaggtcaaaatgcctttgatggtttcaccaattttaactttgagagtattccagatg |
4572325 |
T |
|
| Q |
220 |
gtttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactttcatcgcttttttcgtgaactttt |
319 |
Q |
| |
|
||||| || ||| ||| || ||||| ||||||||||||||| | |||||||||| |||||||| ||||| |||| | ||| || |||||| | |
|
|
| T |
4572324 |
gtttatctccaacggatggcgatggcgatgttagtcaagacatttacgctctttgtaaatcaatcaggaagaattttctacaacctttccgcgaacttct |
4572225 |
T |
|
| Q |
320 |
tgctaaacttcatgattctgcaacttctggtcttatacctccagttacttgc |
371 |
Q |
| |
|
||||| |||| |||| |||||||| ||||||||| | | |||||||| |||| |
|
|
| T |
4572224 |
tgctagacttaatgactctgcaacatctggtcttgtccgtccagttagttgc |
4572173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 24 - 371
Target Start/End: Complemental strand, 4581568 - 4581221
Alignment:
| Q |
24 |
ccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagaggctttcacataacctttg |
123 |
Q |
| |
|
|||||||||||||| | |||||||||| ||||||| ||||||| | |||| | | ||||||||| || |||||| |||||||||||||||||||||||| |
|
|
| T |
4581568 |
ccacatgcagtgttgattccatatccacttcaaggacatatcactccattaataacactagcaaagcttcttcaccttagaggctttcacataacctttg |
4581469 |
T |
|
| Q |
124 |
taaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacctttgagactataccagatggttt |
223 |
Q |
| |
|
| ||||| ||||||||||||||||| ||||||||||||| |||||||| || ||||||||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
4581468 |
tcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcgtttgatggtttcaccgattttacctttgagactattccagatggttt |
4581369 |
T |
|
| Q |
224 |
aacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactttcatcgcttttttcgtgaactttttgct |
323 |
Q |
| |
|
|||| | || ||||| ||| ||||||||| ||||||| || ||||| ||| |||||||| |||||||| | | |||| |||||||| ||||| |
|
|
| T |
4581368 |
aactccgatagaaggcgatagtgatgttaatcaagacatatatgctctatgtgaatcaatcagaaagaacttcctacaacctttttgtgaacttcttgct |
4581269 |
T |
|
| Q |
324 |
aaacttcatgattctgcaacttctggtcttatacctccagttacttgc |
371 |
Q |
| |
|
| |||| |||| ||||| |||||||||||| | ||||||||||||||| |
|
|
| T |
4581268 |
agacttaatgactctgccacttctggtcttgtccctccagttacttgc |
4581221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 6 - 260
Target Start/End: Complemental strand, 4594582 - 4594328
Alignment:
| Q |
6 |
aactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagag |
105 |
Q |
| |
|
||||||||||| |||||||||||||| ||||| | |||| |||| ||||||| ||||| ||| ||||||| ||||| |||||||| |||||| |||||| |
|
|
| T |
4594582 |
aactttgcaaacagaaaaccacatgctgtgttgattccagctccacttcaaggacatataaatccattgttcaaacttgcaaaacttcttcaccttagag |
4594483 |
T |
|
| Q |
106 |
gctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacctttga |
205 |
Q |
| |
|
| ||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||| |||||||||||||| ||||||||| || ||||| |||||| |
|
|
| T |
4594482 |
gatttcacataacctttgtcaacactgaatacaatcataaacgtttgctcaaatcaagaggtccaaatgccttagatggtttccctggttttagctttga |
4594383 |
T |
|
| Q |
206 |
gactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaagac |
260 |
Q |
| |
|
|| |||||||||||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
4594382 |
aaccataccagatggtctaacaccaatggaaggtgatggtgatgttagtcaagac |
4594328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 1 - 423
Target Start/End: Original strand, 4265608 - 4266030
Alignment:
| Q |
1 |
tgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactt |
100 |
Q |
| |
|
||||||| ||||||||| ||| |||||||| ||||| | |||| |||| ||||||||||||||||||||||||| || |||| ||| || |||||| | |
|
|
| T |
4265608 |
tgagtaattttgcaaagccaaagccacatgctgtgttgattccagctccatttcaaggccatatcaatgcattgttcaatctaggaaagcttcttcacct |
4265707 |
T |
|
| Q |
101 |
tagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacc |
200 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||| | |||||||||||| ||| |||| |
|
|
| T |
4265708 |
tagaggctttcacataacctttgtcaacactgaatacaatcacaaacgcttgctcaaatcaagaggtccaaattctcttgatggtttcagtgactttaag |
4265807 |
T |
|
| Q |
201 |
tttgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactttcatc |
300 |
Q |
| |
|
|||||||| |||||||||||| ||||| |||||||||| ||||||||| || ||||||| || | ||||| | ||||||||| | |||||| | || |
|
|
| T |
4265808 |
tttgagaccataccagatggtctaactccaatggaaggcaatggtgatgctactcaagacatataccctcttgtgcaatcaatcatgacgaacttccttc |
4265907 |
T |
|
| Q |
301 |
gcttttttcgtgaactttttgctaaacttcatgattctgcaacttctggtcttatacctccagttacttgctttgtttccgattgctatatgccatttac |
400 |
Q |
| |
|
||| ||||||| || ||| ||||||| | ||||| | | |||| |||| || ||| |||||||||| ||||||||||| || ||||| ||||| |
|
|
| T |
4265908 |
aaccctttgatgaacttcttactagacttcatcaatctgccaatgatggttttattccaccaattacttgcttggtttccgattgttacatgccttttac |
4266007 |
T |
|
| Q |
401 |
agtagatgttgctgaagaacatg |
423 |
Q |
| |
|
| |||||| ||| |||||||||| |
|
|
| T |
4266008 |
aatagatgctgcggaagaacatg |
4266030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 420
Target Start/End: Complemental strand, 4471491 - 4471075
Alignment:
| Q |
1 |
tgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactt |
100 |
Q |
| |
|
||||||| |||||||||| ||| |||||||| || || | ||||| ||||| |||||||||||||||||||||||||||||||||||| || |||||| | |
|
|
| T |
4471491 |
tgagtaattttgcaaagacaaagccacatgctgtattgattccatgtccagctcaaggccatatcaatgcattgttgaaactagcaaagcttcttcacct |
4471392 |
T |
|
| Q |
101 |
tagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacc |
200 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||||||||||||||||| |||||||| |||| ||||| || | |||||||||||| ||| |||| | |
|
|
| T |
4471391 |
tagaggctttcacataacgtttgtcaacactgaatacaatcacaaagccttgctcaattcaagaggtcctgattctcttgatggtttcactgactttaac |
4471292 |
T |
|
| Q |
201 |
tttgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactttcatc |
300 |
Q |
| |
|
|||||||| || ||| ||||||| ||| |||||||| | ||||||| ||| ||||||| ||| | | ||| |||||||||||| | | |||| | || |
|
|
| T |
4471291 |
tttgagaccattccaaatggttttactgcaatggaaag---tggtgatcttattcaagacatacactccttttttcgatcaatcatgacggacttccttc |
4471195 |
T |
|
| Q |
301 |
gcttttttcgtgaactttttgctaaacttcatgattctgcaacttctggtcttatacctccagttacttgctttgtttccgattgctatatgccatttac |
400 |
Q |
| |
|
||| |||||||| || ||| |||| ||| ||||| ||| |||||||||| ||||||||||||||| | |||| ||||| || ||||||||||| |
|
|
| T |
4471194 |
aaccctttggtgaacttcttactagacttgatgcctctgccactgctggtcttatccctccagttacttgcataatttctgattgttacatgccatttac |
4471095 |
T |
|
| Q |
401 |
agtagatgttgctgaagaac |
420 |
Q |
| |
|
|||||||| ||||||||||| |
|
|
| T |
4471094 |
agtagatgctgctgaagaac |
4471075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 24 - 399
Target Start/End: Original strand, 4258750 - 4259125
Alignment:
| Q |
24 |
ccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagaggctttcacataacctttg |
123 |
Q |
| |
|
|||||||| ||||| | ||||||||||| |||||||||||||||| ||||||| |||||||| || || |||||||||| ||| |||||||||||||||| |
|
|
| T |
4258750 |
ccacatgctgtgttgattccatatccagctcaaggccatatcaatccattgttcaaactagctaagcttcttcactttaaaggttttcacataacctttg |
4258849 |
T |
|
| Q |
124 |
taaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacctttgagactataccagatggttt |
223 |
Q |
| |
|
| ||||||||||| ||||||||||| ||||||||||||| ||| ||||||| |||||||||||| ||||||||||||||||||||| | ||||||| | |
|
|
| T |
4258850 |
tcaacactgaatataatcacaaacgtttgctcaaatcaagaggtgaaaatgccgttgatggtttcattgattttacctttgagactattcaagatggtct |
4258949 |
T |
|
| Q |
224 |
aacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactttcatcgcttttttcgtgaactttttgct |
323 |
Q |
| |
|
||| || ||||||||||||| ||||||| ||||||| ||| | | |||| || ||| || | |||||||| | || ||| |||||||| ||||| |
|
|
| T |
4258950 |
gactccagtggaaggtgatggcgatgttactcaagacgtaccctccctttctcaatctataagaaagaacttccttcagccctttggtgaacttcttgct |
4259049 |
T |
|
| Q |
324 |
aaacttcatgattctgcaacttctggtcttatacctccagttacttgctttgtttccgattgctatatgccattta |
399 |
Q |
| |
|
|||||||| || || || ||| ||||| || | || || ||||||||||| ||||| ||||| || ||| |||||| |
|
|
| T |
4259050 |
aaacttcaagactcagccactactggtattgttccacctgttacttgcttagtttctgattgttacatgtcattta |
4259125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 4513530 - 4513775
Alignment:
| Q |
1 |
tgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactt |
100 |
Q |
| |
|
||||||| | ||||| |||||||||||||| ||||| | |||||||||| ||||||||||||||||| || |||| | | ||||||||||||||||| | |
|
|
| T |
4513530 |
tgagtaattctgcaagcagaaaaccacatgctgtgttgattccatatccacttcaaggccatatcaatccaatgttcagattagcaaaactacttcacct |
4513629 |
T |
|
| Q |
101 |
tagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacc |
200 |
Q |
| |
|
|||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| ||||| ||||| ||||||||||||| |||||| | |
|
|
| T |
4513630 |
tagaggctttcacataacctttgttaacaccgaatacaatcacaaacgtttgctcaaatcaagaggtcctaatgcttttgatggtttcaccgattttcgc |
4513729 |
T |
|
| Q |
201 |
tttgagactataccagatggtttaacttcaatggaaggtgatggtg |
246 |
Q |
| |
|
||||||||||| || |||||||||||| ||||||| || ||||||| |
|
|
| T |
4513730 |
tttgagactattcctgatggtttaactccaatggatggcgatggtg |
4513775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 37 - 259
Target Start/End: Complemental strand, 4569611 - 4569393
Alignment:
| Q |
37 |
taactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagaggctttcacataacctttgtaaacactgaata |
136 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||| ||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||| ||| |
|
|
| T |
4569611 |
taactccatatccacttcaaggccatatcaatccattattgaaactagcaaaacttcttcaccttagaggctttcacataacctttgtcaacaccgaa-- |
4569514 |
T |
|
| Q |
137 |
caatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacctttgagactataccagatggtttaacttcaatggaa |
236 |
Q |
| |
|
||||||||| ||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||| | | ||| |
|
|
| T |
4569513 |
--atcacaaacatttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgacagaa |
4569416 |
T |
|
| Q |
237 |
ggtgatggtgatgttagtcaaga |
259 |
Q |
| |
|
||| |||||||| |||||||||| |
|
|
| T |
4569415 |
ggttatggtgatattagtcaaga |
4569393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 6 - 259
Target Start/End: Complemental strand, 4603682 - 4603429
Alignment:
| Q |
6 |
aactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagag |
105 |
Q |
| |
|
||||||||||| ||||||| |||||| ||||| | |||||||||| ||||||||||||||||| || |||||||||||||||||||| ||||| |||||| |
|
|
| T |
4603682 |
aactttgcaaacagaaaacaacatgctgtgttgattccatatccacttcaaggccatatcaatccaatgttgaaactagcaaaactatttcaccttagag |
4603583 |
T |
|
| Q |
106 |
gctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacctttga |
205 |
Q |
| |
|
| ||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| ||||| |||||||| || || |||| |||||||| |||||| |
|
|
| T |
4603582 |
gatttcacataacctttgtcaacaccgaatacaatcacaaacgtttgctcaaatcaagaggtcctaatgccttagacggcttcactgattttagctttga |
4603483 |
T |
|
| Q |
206 |
gactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaaga |
259 |
Q |
| |
|
|| || |||||||| |||| | ||||||||||||| | ||||||||||||| |
|
|
| T |
4603482 |
aacaatcccagatggactaacaccgatggaaggtgatgataatgttagtcaaga |
4603429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 9 - 259
Target Start/End: Complemental strand, 4565598 - 4565348
Alignment:
| Q |
9 |
tttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagaggct |
108 |
Q |
| |
|
|||||||| |||||||||||||| ||||| | |||| |||| ||||||| ||||| ||| ||||||| ||||| |||||||| |||||| ||||||| | |
|
|
| T |
4565598 |
tttgcaaacagaaaaccacatgctgtgttgattccagctccatttcaaggacatataaatccattgttcaaacttgcaaaacttcttcaccttagaggat |
4565499 |
T |
|
| Q |
109 |
ttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacctttgagac |
208 |
Q |
| |
|
|||| ||||||||||| ||||||||||||||||| ||||| ||||| ||||||| |||||||||||||| ||||||| | || |||| |||||| || |
|
|
| T |
4565498 |
ttcatataacctttgtcaacactgaatacaatcataaacgattgctaaaatcaagaggtccaaatgccttagatggttcccgtggtttttgctttgaaac |
4565399 |
T |
|
| Q |
209 |
tataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaaga |
259 |
Q |
| |
|
|||||||||||| |||| | || |||||||||||||||||||||||||| |
|
|
| T |
4565398 |
cataccagatggtctaacaccgatagaaggtgatggtgatgttagtcaaga |
4565348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 4462784 - 4462549
Alignment:
| Q |
1 |
tgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactt |
100 |
Q |
| |
|
||||||| |||||||||| ||| |||||||| ||||| | ||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||| | |
|
|
| T |
4462784 |
tgagtaattttgcaaagacaaagccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcacct |
4462685 |
T |
|
| Q |
101 |
tagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacc |
200 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||||||||||||||| | |||||||| |||| ||||| ||| | | |||||||||| ||| |||| | |
|
|
| T |
4462684 |
tagaggttttcacataacctttgtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctctagatggtttcactgactttaac |
4462585 |
T |
|
| Q |
201 |
tttgagactataccagatggtttaacttcaatggaa |
236 |
Q |
| |
|
|||||||| || ||| ||||||| || |||||||| |
|
|
| T |
4462584 |
tttgagaccattccaaatggttttacaacaatggaa |
4462549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 126 - 373
Target Start/End: Original strand, 4298174 - 4298421
Alignment:
| Q |
126 |
aacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacctttgagactataccagatggtttaa |
225 |
Q |
| |
|
||||| |||||||||||||||| ||||| |||||| ||||||||| || ||||||||||||| | |||| |||||||||||| ||||||||| | | |
|
|
| T |
4298174 |
aacaccgaatacaatcacaaacacctgctcgaatcaaggggtccaaaagcttttgatggtttcaccaactttagctttgagactattccagatggtctga |
4298273 |
T |
|
| Q |
226 |
cttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactttcatcgcttttttcgtgaactttttgctaa |
325 |
Q |
| |
|
|| ||| |||||||||||| ||||||| ||||||| ||| |||||| | |||||||| |||||||| | || ||| |||||||| ||||||| |
|
|
| T |
4298274 |
ctccaacggaaggtgatggagatgttactcaagacataccatctctttcccaatcaatcagaaagaacttccttcagccctttggtgaacttcttgctaa |
4298373 |
T |
|
| Q |
326 |
acttcatgattctgcaacttctggtcttatacctccagttacttgctt |
373 |
Q |
| |
|
||||| ||||||||| ||| |||||||| |||| |||||||||||||| |
|
|
| T |
4298374 |
acttcgtgattctgccactgctggtcttgtaccaccagttacttgctt |
4298421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 252
Target Start/End: Complemental strand, 4599721 - 4599489
Alignment:
| Q |
20 |
aaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagaggctttcacataacc |
119 |
Q |
| |
|
||||| ||||||||| || | ||||| ||| ||||||| |||||||| ||| | ||||||||||| | |||||| ||||||| ||| |||||||| |
|
|
| T |
4599721 |
aaaactacatgcagtattgattccattaccaattcaaggaaatatcaatctattaatcaaactagcaaagattcttcaccttagaggattttacataacc |
4599622 |
T |
|
| Q |
120 |
tttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacctttgagactataccagatg |
219 |
Q |
| |
|
|| || ||||| || |||||||||||||| ||||||||||||| ||||| ||| | | ||||||||| ||||||| |||| |||||||| ||||||| |
|
|
| T |
4599621 |
ttcgtgaacaccgagtacaatcacaaacgcttgctcaaatcaagaggtcctaattctcgtaatggtttcactgatttttccttcgagactattccagatg |
4599522 |
T |
|
| Q |
220 |
gtttaacttcaatggaaggtgatggtgatgtta |
252 |
Q |
| |
|
|||||||| |||| || |||||||||||||||| |
|
|
| T |
4599521 |
gtttaactccaatagatggtgatggtgatgtta |
4599489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 4497796 - 4497899
Alignment:
| Q |
1 |
tgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactt |
100 |
Q |
| |
|
|||||||||||| | ||| ||| |||||||||||||||||||||| |||| || |||||||||||||| ||||||||||||||| |||| |||||||| | |
|
|
| T |
4497796 |
tgagtaactttgaagagaaaaagccacatgcagtgttaactccatttccaatttaaggccatatcaatccattgttgaaactaggaaaattacttcacct |
4497895 |
T |
|
| Q |
101 |
taga |
104 |
Q |
| |
|
|||| |
|
|
| T |
4497896 |
taga |
4497899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 186
Target Start/End: Original strand, 4255395 - 4255545
Alignment:
| Q |
24 |
ccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagaggctttcacataacctttg |
123 |
Q |
| |
|
|||||||| ||||| | |||||||||||||||||||||||||||| ||| || |||||||||||| ||||||| ||| ||| ||||| |
|
|
| T |
4255395 |
ccacatgctgtgttgattccatatccagttcaaggccatatcaatctattattcaaactagcaaaattacttcatcttaaagg------------ctttg |
4255482 |
T |
|
| Q |
124 |
taaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtt |
186 |
Q |
| |
|
| ||||| ||||||||||||||||| |||||| |||||| |||||||| ||||||||||||| |
|
|
| T |
4255483 |
tcaacaccgaatacaatcacaaacgcttgctcgaatcaagaggtccaaaagcctttgatggtt |
4255545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 4493465 - 4493401
Alignment:
| Q |
18 |
agaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaact |
82 |
Q |
| |
|
|||||||||||||||||||| | ||||| ||||| |||||| |||||||||||| || ||||||| |
|
|
| T |
4493465 |
agaaaaccacatgcagtgttgattccatttccagctcaaggtcatatcaatgcaatgctgaaact |
4493401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 4472683 - 4472612
Alignment:
| Q |
1 |
tgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcat |
72 |
Q |
| |
|
||||||| ||||||| || |||||||||||||||||| | ||||| |||| ||||||||||||||||||| |
|
|
| T |
4472683 |
tgagtaattttgcaatgacaaaaccacatgcagtgttgattccatgtccaccccaaggccatatcaatgcat |
4472612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 400
Target Start/End: Original strand, 4513837 - 4513932
Alignment:
| Q |
305 |
ttttcgtgaactttttgctaaacttcatgattctgcaacttctggtcttatacctccagttacttgctttgtttccgattgctatatgccatttac |
400 |
Q |
| |
|
|||||| |||||||| ||||||||| |||| ||||||| | |||||||||||| ||||||||||| ||||| ||||| |||||||||||| |
|
|
| T |
4513837 |
ttttcgcgaacttttagctaaacttaatgactctgcaaaagccggtcttataccttttgttacttgcttagtttctgattgtattatgccatttac |
4513932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 152; Significance: 2e-80; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 6 - 400
Target Start/End: Original strand, 2007 - 2404
Alignment:
| Q |
6 |
aactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagag |
105 |
Q |
| |
|
||||||||||| ||||||||||||| ||| | | |||||||||||||||||||||||||||| ||||||| ||||||||||| || |||||| |||||| |
|
|
| T |
2007 |
aactttgcaaacagaaaaccacatgttgtgatgattccatatccagttcaaggccatatcaatccattgttcaaactagcaaagcttcttcaccttagag |
2106 |
T |
|
| Q |
106 |
gctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacctttga |
205 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||| ||||| ||||| ||||||||||| ||||||| ||| || |
|
|
| T |
2107 |
gctttcacataacctttgtcaacactgaatacaatcataaacgcttgctcaaatcaagaggtcctaatgctcttgatggtttcgctgatttttgcttcga |
2206 |
T |
|
| Q |
206 |
gactataccagatggtttaacttcaatggaa---ggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactttcatcgc |
302 |
Q |
| |
|
|||||| || |||||||||||| || ||||| | ||||||| |||||||||||||| ||| | |||||||| |||||||| || ||||| | || | |
|
|
| T |
2207 |
gactattcccgatggtttaactccagtggaagatgatgatggtaatgttagtcaagacatactctctctttgtaaatcaatcagaaaaaacttccttcac |
2306 |
T |
|
| Q |
303 |
ttttttcgtgaactttttgctaaacttcatgattctgcaacttctggtcttatacctccagttacttgctttgtttccgattgctatatgccatttac |
400 |
Q |
| |
|
|| ||||| |||||| |||||| |||| | || ||||| | |||||||||||| |||||||| ||| |||| ||||| ||||| || ||| ||||||| |
|
|
| T |
2307 |
ttctttcgcgaacttcttgctagacttgacgagtctgccaattctggtcttatccctccagtaactagcttagtttctgattgttacatgtcatttac |
2404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 148; Significance: 6e-78; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 6 - 257
Target Start/End: Complemental strand, 1283005 - 1282754
Alignment:
| Q |
6 |
aactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagag |
105 |
Q |
| |
|
||||||||||| | |||||||||||| ||||| | ||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||| |||||| |
|
|
| T |
1283005 |
aactttgcaaacacaaaaccacatgctgtgttgattccatatccagctcaaggccatatcaatccattgttcaaactagcaaaactacttcaccttagag |
1282906 |
T |
|
| Q |
106 |
gctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacctttga |
205 |
Q |
| |
|
||||| ||||||||||||| || |||||||||||||||||||| ||||||||||||| |||||||||||| | |||||||||| |||||||| |||||| |
|
|
| T |
1282905 |
gcttttacataacctttgttaatactgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgccctagatggtttcactgattttagctttga |
1282806 |
T |
|
| Q |
206 |
gactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaa |
257 |
Q |
| |
|
|| || ||||||||| |||| ||| | |||||||||||||||||||||||| |
|
|
| T |
1282805 |
aaccatcccagatggtctaacatcactagaaggtgatggtgatgttagtcaa |
1282754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 148
Target Start/End: Complemental strand, 35776316 - 35776276
Alignment:
| Q |
108 |
tttcacataacctttgtaaacactgaatacaatcacaaacg |
148 |
Q |
| |
|
||||||||||||||||| |||||||||| ||| |||||||| |
|
|
| T |
35776316 |
tttcacataacctttgtgaacactgaattcaaccacaaacg |
35776276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 148
Target Start/End: Complemental strand, 35842123 - 35842083
Alignment:
| Q |
108 |
tttcacataacctttgtaaacactgaatacaatcacaaacg |
148 |
Q |
| |
|
||||||||||||||||| |||||||||| ||| |||||||| |
|
|
| T |
35842123 |
tttcacataacctttgtgaacactgaattcaaccacaaacg |
35842083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 148
Target Start/End: Complemental strand, 35854631 - 35854591
Alignment:
| Q |
108 |
tttcacataacctttgtaaacactgaatacaatcacaaacg |
148 |
Q |
| |
|
||||||||||||||||| |||||||||| ||| |||||||| |
|
|
| T |
35854631 |
tttcacataacctttgtgaacactgaattcaaccacaaacg |
35854591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 148
Target Start/End: Complemental strand, 35869240 - 35869200
Alignment:
| Q |
108 |
tttcacataacctttgtaaacactgaatacaatcacaaacg |
148 |
Q |
| |
|
||||||||||||||||| |||||||||| ||| |||||||| |
|
|
| T |
35869240 |
tttcacataacctttgtgaacactgaattcaaccacaaacg |
35869200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 147; Significance: 2e-77; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 9 - 398
Target Start/End: Complemental strand, 2393 - 2001
Alignment:
| Q |
9 |
tttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagaggct |
108 |
Q |
| |
|
|||||||| | |||||||||||| ||||| | |||||||||||||||||||||||||||| |||| || ||||||||||| || |||||| ||||||||| |
|
|
| T |
2393 |
tttgcaaacaaaaaaccacatgctgtgttgattccatatccagttcaaggccatatcaatccattattcaaactagcaaagcttcttcaccttagaggct |
2294 |
T |
|
| Q |
109 |
ttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacctttgagac |
208 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| ||||| ||||||||||||| ||||| ||||| ||||||||||| ||||||| ||| ||||| |
|
|
| T |
2293 |
ttcacataacctttgtcaacactgaatacaatcataaacgcttgctcaaatcaagaggtcctaatgctcttgatggtttcgctgatttttgcttcgagac |
2194 |
T |
|
| Q |
209 |
tataccagatggtttaacttcaatggaa---ggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactttcatcgcttt |
305 |
Q |
| |
|
||| || |||||||||||| || ||||| | ||||||| |||||||||||||| ||| | |||||||| |||||||| || ||||| | || ||| |
|
|
| T |
2193 |
tattcccgatggtttaactccagtggaagatgatgatggtaatgttagtcaagacatactctctctttgtaaatcaatcagaaaaaacttccttcacttc |
2094 |
T |
|
| Q |
306 |
tttcgtgaactttttgctaaacttcatgattctgcaacttctggtcttatacctccagttacttgctttgtttccgattgctatatgccattt |
398 |
Q |
| |
|
||||| |||||| |||||| |||| | || ||||| | |||||||||||| |||||||| ||| |||| ||||| ||||| || ||| ||||| |
|
|
| T |
2093 |
tttcgcgaacttcttgctagacttgacgagtctgccaattctggtcttatccctccagtaactagcttagtttctgattgttacatgtcattt |
2001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0199 (Bit Score: 128; Significance: 5e-66; HSPs: 1)
Name: scaffold0199
Description:
Target: scaffold0199; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 6 - 257
Target Start/End: Complemental strand, 1330 - 1079
Alignment:
| Q |
6 |
aactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagag |
105 |
Q |
| |
|
||||||||||| |||||| ||||||| ||||| | ||||||||||| |||||||||||||||| ||||||| |||||||||||||| ||||| |||||| |
|
|
| T |
1330 |
aactttgcaaacagaaaatcacatgctgtgttcattccatatccagctcaaggccatatcaatccattgttcaaactagcaaaacttattcaccttagag |
1231 |
T |
|
| Q |
106 |
gctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacctttga |
205 |
Q |
| |
|
||| ||| |||||| ||| ||||||||||||||||||||||| ||||||||||||| ||||||| |||||| |||||||||| |||||||| |||||| |
|
|
| T |
1230 |
gctctcatgtaacctatgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtccaactgccttggatggtttcactgattttagctttga |
1131 |
T |
|
| Q |
206 |
gactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaa |
257 |
Q |
| |
|
|| || ||||||||| |||| || | |||||||||||||||||||||||| |
|
|
| T |
1130 |
aaccatcccagatggtctaacaccactagaaggtgatggtgatgttagtcaa |
1079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 128; Significance: 5e-66; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 6 - 257
Target Start/End: Complemental strand, 1676093 - 1675842
Alignment:
| Q |
6 |
aactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagag |
105 |
Q |
| |
|
||||||||||| |||||| ||||||| ||||| | ||||||||||| |||||||||||||||| ||||||| |||||||||||||| ||||| |||||| |
|
|
| T |
1676093 |
aactttgcaaacagaaaatcacatgctgtgttcattccatatccagctcaaggccatatcaatccattgttcaaactagcaaaacttattcaccttagag |
1675994 |
T |
|
| Q |
106 |
gctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacctttga |
205 |
Q |
| |
|
||| ||| |||||| ||| ||||||||||||||||||||||| ||||||||||||| ||||||| |||||| |||||||||| |||||||| |||||| |
|
|
| T |
1675993 |
gctctcatgtaacctatgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtccaactgccttggatggtttcactgattttagctttga |
1675894 |
T |
|
| Q |
206 |
gactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaa |
257 |
Q |
| |
|
|| || ||||||||| |||| || | |||||||||||||||||||||||| |
|
|
| T |
1675893 |
aaccatcccagatggtctaacaccactagaaggtgatggtgatgttagtcaa |
1675842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 379
Target Start/End: Original strand, 20862361 - 20862733
Alignment:
| Q |
1 |
tgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactt |
100 |
Q |
| |
|
||||||| ||||| ||| ||||||||||||||||||||||||||||||| ||||||| ||||||||| || |||| ||||||||||||||||||||| | |
|
|
| T |
20862361 |
tgagtaattttgctgagaaaaaaccacatgcagtgttaactccatatccacttcaaggtcatatcaatccaatgttaaaactagcaaaactacttcacct |
20862460 |
T |
|
| Q |
101 |
tagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacc |
200 |
Q |
| |
|
|||||||||| ||||||| ||||| || |||||||||||||||||||| ||||| || |||| |||||||| ||||||||||||||| ||| ||| | |
|
|
| T |
20862461 |
tagaggcttttacataacatttgtcaatactgaatacaatcacaaacgcttgcttaagtcaatgggtccaataccctttgatggtttcactgactttcgc |
20862560 |
T |
|
| Q |
201 |
tttgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactttcatc |
300 |
Q |
| |
|
|||||||| | |||||||||| ||||||| | ||||| |||||||||||||||||| | ||||| || || ||||| | |||| |||||| |
|
|
| T |
20862561 |
tttgagaccgttccagatggttcaacttca---catggtga---tgatgttagtcaagacttccaatctcttcgtgaattaatcagaacgaac-ttcatc |
20862653 |
T |
|
| Q |
301 |
g-cttttttcgtgaactttttgctaaacttcatgattctgcaacttctggtcttatacctccagttacttgctttgtttc |
379 |
Q |
| |
|
| | ||||||||||||| |||| ||||||||||| ||| | | ||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
20862654 |
gacagttttcgtgaacttcttgccaaacttcatgactcttccaaatctggtcttatacctcctgttacttgcttagtttc |
20862733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 192 - 295
Target Start/End: Original strand, 16685029 - 16685132
Alignment:
| Q |
192 |
gattttacctttgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaaga |
291 |
Q |
| |
|
||||||| |||||||||||| ||| |||||||| || ||| ||| |||||||| ||||||||||||||| ||| |||||||||| |||||||| |||| |
|
|
| T |
16685029 |
gattttagctttgagactattccatatggtttacctccaacggatggtgatggcgatgttagtcaagacatacacgctctttgtaaatcaatcagaaaga |
16685128 |
T |
|
| Q |
292 |
actt |
295 |
Q |
| |
|
|||| |
|
|
| T |
16685129 |
actt |
16685132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 111; Significance: 7e-56; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 24 - 262
Target Start/End: Complemental strand, 3088299 - 3088061
Alignment:
| Q |
24 |
ccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagaggctttcacataacctttg |
123 |
Q |
| |
|
|||||||| ||||| | |||||||||| ||||||| ||||| ||| ||||||| |||||||||||||| |||||| ||| |||||||||||||||||||| |
|
|
| T |
3088299 |
ccacatgctgtgttgattccatatccacttcaaggtcatataaatccattgttaaaactagcaaaacttcttcaccttaaaggctttcacataacctttg |
3088200 |
T |
|
| Q |
124 |
taaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacctttgagactataccagatggttt |
223 |
Q |
| |
|
| || || |||||||||||||| || ||||| ||||||| ||| | ||| | |||||||||||| ||||||| |||||||||||| | ||||||| | |
|
|
| T |
3088199 |
tcaataccgaatacaatcacaaccgtttgcttaaatcaagaggttctaattctcttgatggtttcactgattttgtctttgagactatccaagatggtct |
3088100 |
T |
|
| Q |
224 |
aacttcaatggaaggtgatggtgatgttagtcaagactt |
262 |
Q |
| |
|
|||| ||||||||||| |||||||||||||||||||||| |
|
|
| T |
3088099 |
aactccaatggaaggtaatggtgatgttagtcaagactt |
3088061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 108; Significance: 4e-54; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 24104672 - 24104413
Alignment:
| Q |
1 |
tgagtaactttgcaaagagaaaaccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactt |
100 |
Q |
| |
|
||||||| |||| |||| ||| || ||||| ||||| | |||| |||| ||||||| ||||||||||||||||| ||||||| ||| || |||||| | |
|
|
| T |
24104672 |
tgagtaattttgtaaagccaaagccgcatgctgtgttgattccagctccatttcaaggtcatatcaatgcattgttcaaactaggaaagcttcttcacct |
24104573 |
T |
|
| Q |
101 |
tagaggctttcacataacctttgtaaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttacc |
200 |
Q |
| |
|
||||||||||||||||||||| || ||||| ||||||||||||||||| |||||| |||||| | ||| ||| | |||||||||||||||| |||| | |
|
|
| T |
24104572 |
tagaggctttcacataaccttcgtgaacaccgaatacaatcacaaacgcttgctcgaatcaagagatcctaattctcttgatggtttcaatgactttaac |
24104473 |
T |
|
| Q |
201 |
tttgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaagac |
260 |
Q |
| |
|
|||||||| |||||||||||| ||||| |||||||||| |||||||||||| ||||||| |
|
|
| T |
24104472 |
tttgagaccataccagatggtctaactccaatggaaggcaatggtgatgttactcaagac |
24104413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 423
Target Start/End: Original strand, 3383 - 3495
Alignment:
| Q |
311 |
tgaactttttgctaaacttcatgattctgcaacttctggtcttatacctccagttacttgctttgtttccgattgctatatgccatttacagtagatgtt |
410 |
Q |
| |
|
||||||| ||| |||||||||||| ||||| ||| |||||||| | || | |||||||||| | || | ||||| || ||||||||||| || | | | |
|
|
| T |
3383 |
tgaacttcttgttaaacttcatgactctgccactgctggtcttgttccacaagttacttgcatagtcgctgattgttacatgccatttaccatacaagct |
3482 |
T |
|
| Q |
411 |
gctgaagaacatg |
423 |
Q |
| |
|
||||||||||||| |
|
|
| T |
3483 |
gctgaagaacatg |
3495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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