View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18980_low_4 (Length: 407)

Name: NF18980_low_4
Description: NF18980
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18980_low_4
NF18980_low_4
[»] chr5 (26 HSPs)
chr5 (18-253)||(30755665-30755899)
chr5 (45-252)||(30740678-30740885)
chr5 (282-387)||(2740279-2740384)
chr5 (280-387)||(28177778-28177885)
chr5 (282-387)||(33149628-33149733)
chr5 (280-387)||(6679701-6679808)
chr5 (282-381)||(18520880-18520979)
chr5 (280-382)||(2252163-2252265)
chr5 (280-387)||(35943882-35943989)
chr5 (280-382)||(3921260-3921362)
chr5 (280-386)||(26720519-26720625)
chr5 (280-386)||(26990268-26990374)
chr5 (282-387)||(35785204-35785309)
chr5 (282-387)||(36732932-36733037)
chr5 (282-387)||(40145412-40145517)
chr5 (282-377)||(14831819-14831914)
chr5 (279-387)||(21370016-21370114)
chr5 (284-380)||(13811659-13811755)
chr5 (282-381)||(33825320-33825419)
chr5 (280-395)||(39688879-39688994)
chr5 (280-386)||(31008991-31009097)
chr5 (280-387)||(15409600-15409707)
chr5 (282-381)||(42414298-42414397)
chr5 (282-335)||(36875645-36875698)
chr5 (281-340)||(10356638-10356698)
chr5 (282-387)||(20073506-20073611)
[»] chr7 (38 HSPs)
chr7 (280-387)||(36208176-36208283)
chr7 (282-390)||(3434567-3434675)
chr7 (282-387)||(3784000-3784105)
chr7 (282-387)||(7389394-7389499)
chr7 (280-384)||(12310909-12311011)
chr7 (282-387)||(19329847-19329952)
chr7 (282-386)||(19436178-19436282)
chr7 (280-395)||(35522879-35522994)
chr7 (280-387)||(41423685-41423792)
chr7 (282-387)||(8080373-8080478)
chr7 (282-387)||(38267045-38267150)
chr7 (282-386)||(36361904-36362008)
chr7 (282-386)||(36362031-36362135)
chr7 (280-387)||(18207183-18207289)
chr7 (280-387)||(21234404-21234511)
chr7 (280-347)||(32564456-32564523)
chr7 (280-387)||(46033791-46033898)
chr7 (280-346)||(22343364-22343430)
chr7 (280-382)||(41915744-41915846)
chr7 (282-387)||(35137538-35137643)
chr7 (282-387)||(38837222-38837327)
chr7 (282-387)||(40957712-40957817)
chr7 (280-372)||(46374807-46374899)
chr7 (280-382)||(38044200-38044302)
chr7 (282-387)||(10343553-10343658)
chr7 (280-345)||(40846145-40846210)
chr7 (282-381)||(4999510-4999609)
chr7 (280-382)||(8238215-8238318)
chr7 (280-387)||(26296647-26296754)
chr7 (313-387)||(27744299-27744373)
chr7 (282-387)||(3694372-3694477)
chr7 (280-347)||(39255953-39256020)
chr7 (280-350)||(7727909-7727979)
chr7 (315-389)||(16374812-16374886)
chr7 (282-384)||(35468848-35468950)
chr7 (282-387)||(2318233-2318338)
chr7 (280-333)||(31735887-31735940)
chr7 (282-387)||(32951483-32951588)
[»] chr6 (22 HSPs)
chr6 (280-387)||(31976251-31976358)
chr6 (284-387)||(32869685-32869788)
chr6 (282-387)||(22880648-22880753)
chr6 (280-382)||(15508019-15508121)
chr6 (280-382)||(15990037-15990139)
chr6 (280-382)||(30341355-30341457)
chr6 (282-387)||(17598559-17598664)
chr6 (282-387)||(11427621-11427728)
chr6 (282-346)||(31953061-31953125)
chr6 (282-387)||(12732487-12732592)
chr6 (282-342)||(28536521-28536581)
chr6 (284-387)||(946383-946486)
chr6 (282-381)||(15832582-15832681)
chr6 (280-386)||(31110752-31110856)
chr6 (280-382)||(4231551-4231653)
chr6 (282-387)||(6209455-6209560)
chr6 (281-382)||(9379707-9379808)
chr6 (318-387)||(23128117-23128186)
chr6 (282-386)||(29857832-29857936)
chr6 (321-387)||(30870058-30870124)
chr6 (289-387)||(31109390-31109488)
chr6 (282-343)||(22422052-22422113)
[»] chr4 (32 HSPs)
chr4 (282-387)||(6034049-6034154)
chr4 (282-387)||(50052418-50052523)
chr4 (282-387)||(50526161-50526266)
chr4 (280-382)||(50813887-50813989)
chr4 (282-387)||(48183039-48183144)
chr4 (282-386)||(11511453-11511557)
chr4 (280-382)||(55475194-55475296)
chr4 (282-387)||(480437-480542)
chr4 (282-387)||(41236352-41236457)
chr4 (280-347)||(29547989-29548056)
chr4 (280-387)||(40574782-40574889)
chr4 (280-382)||(19670711-19670813)
chr4 (280-382)||(32766961-32767063)
chr4 (282-387)||(29239891-29239996)
chr4 (282-387)||(42044357-42044462)
chr4 (318-387)||(56300155-56300224)
chr4 (282-385)||(3481659-3481762)
chr4 (280-387)||(31910195-31910302)
chr4 (280-382)||(47986211-47986313)
chr4 (297-382)||(17983738-17983823)
chr4 (282-387)||(24995097-24995202)
chr4 (282-387)||(29234235-29234340)
chr4 (282-387)||(54473523-54473628)
chr4 (280-387)||(48647716-48647823)
chr4 (280-347)||(55079744-55079811)
chr4 (321-387)||(18769037-18769103)
chr4 (280-347)||(8343193-8343260)
chr4 (282-381)||(23608240-23608339)
chr4 (321-395)||(41823926-41824000)
chr4 (282-382)||(29977890-29977990)
chr4 (280-347)||(18924525-18924592)
chr4 (280-350)||(44536773-44536842)
[»] chr2 (35 HSPs)
chr2 (280-386)||(26891495-26891601)
chr2 (280-387)||(40613892-40613999)
chr2 (282-387)||(17473025-17473130)
chr2 (282-387)||(33436090-33436195)
chr2 (280-387)||(17819994-17820101)
chr2 (282-381)||(28863460-28863559)
chr2 (282-387)||(9058485-9058590)
chr2 (283-387)||(3439985-3440089)
chr2 (282-386)||(5574479-5574583)
chr2 (282-395)||(7465717-7465830)
chr2 (282-387)||(10249372-10249477)
chr2 (282-387)||(13438348-13438453)
chr2 (282-387)||(20700820-20700925)
chr2 (280-382)||(45097730-45097832)
chr2 (282-387)||(19930810-19930915)
chr2 (282-387)||(30915468-30915573)
chr2 (282-387)||(32505638-32505743)
chr2 (282-387)||(40701483-40701588)
chr2 (320-387)||(3737986-3738053)
chr2 (280-387)||(42257196-42257303)
chr2 (280-347)||(43490124-43490191)
chr2 (280-382)||(38732357-38732459)
chr2 (282-387)||(41575142-41575248)
chr2 (297-382)||(2997482-2997567)
chr2 (282-387)||(28381645-28381750)
chr2 (282-382)||(27864709-27864809)
chr2 (280-387)||(15428730-15428837)
chr2 (280-387)||(38273132-38273239)
chr2 (282-384)||(33436216-33436318)
chr2 (282-387)||(4060690-4060795)
chr2 (297-346)||(13365373-13365422)
chr2 (282-354)||(38882837-38882908)
chr2 (280-387)||(36168839-36168946)
chr2 (280-342)||(2533127-2533188)
chr2 (282-342)||(17823789-17823849)
[»] scaffold1268 (1 HSPs)
scaffold1268 (282-387)||(919-1024)
[»] scaffold1267 (1 HSPs)
scaffold1267 (282-387)||(919-1024)
[»] chr8 (31 HSPs)
chr8 (282-387)||(5957835-5957940)
chr8 (282-387)||(37038484-37038589)
chr8 (282-387)||(34012286-34012391)
chr8 (280-387)||(10621077-10621184)
chr8 (280-387)||(15258919-15259026)
chr8 (280-387)||(43414571-43414678)
chr8 (280-382)||(34307219-34307321)
chr8 (282-387)||(1179930-1180035)
chr8 (282-387)||(12831052-12831157)
chr8 (282-387)||(15197338-15197443)
chr8 (284-387)||(14547929-14548032)
chr8 (319-386)||(38229470-38229537)
chr8 (280-382)||(16383380-16383482)
chr8 (282-387)||(504111-504216)
chr8 (282-387)||(4854853-4854958)
chr8 (280-381)||(15048178-15048278)
chr8 (282-387)||(23122587-23122692)
chr8 (282-387)||(40423933-40424038)
chr8 (280-384)||(10284624-10284728)
chr8 (297-387)||(8841422-8841512)
chr8 (321-387)||(9122229-9122295)
chr8 (280-382)||(16056396-16056498)
chr8 (280-382)||(24307788-24307890)
chr8 (280-382)||(32032728-32032829)
chr8 (282-387)||(44507077-44507182)
chr8 (282-386)||(20074933-20075029)
chr8 (280-347)||(24307632-24307699)
chr8 (280-347)||(30479504-30479571)
chr8 (280-354)||(14055615-14055689)
chr8 (280-350)||(17443828-17443898)
chr8 (282-342)||(42221520-42221580)
[»] chr1 (32 HSPs)
chr1 (282-387)||(51898673-51898778)
chr1 (280-387)||(32813250-32813357)
chr1 (282-387)||(37649203-37649308)
chr1 (282-387)||(47452310-47452415)
chr1 (282-387)||(2581920-2582025)
chr1 (282-387)||(9474866-9474971)
chr1 (282-387)||(27564725-27564830)
chr1 (282-395)||(44548358-44548471)
chr1 (280-382)||(50590995-50591097)
chr1 (282-387)||(3000324-3000429)
chr1 (282-387)||(8346378-8346483)
chr1 (280-387)||(6260873-6260980)
chr1 (280-347)||(41608523-41608590)
chr1 (280-387)||(44453982-44454089)
chr1 (280-382)||(5958995-5959097)
chr1 (282-387)||(38595159-38595264)
chr1 (272-390)||(26440728-26440847)
chr1 (282-381)||(48716278-48716377)
chr1 (315-377)||(48489338-48489400)
chr1 (282-387)||(38632311-38632416)
chr1 (282-387)||(50630463-50630568)
chr1 (280-386)||(45044551-45044657)
chr1 (282-387)||(43137-43242)
chr1 (282-390)||(26274437-26274545)
chr1 (308-381)||(13414792-13414865)
chr1 (282-387)||(23597081-23597186)
chr1 (282-387)||(41758810-41758915)
chr1 (282-342)||(3302568-3302628)
chr1 (280-386)||(37926429-37926535)
chr1 (280-382)||(47748446-47748547)
chr1 (280-342)||(49811562-49811624)
chr1 (282-387)||(11152368-11152472)
[»] chr3 (37 HSPs)
chr3 (280-387)||(26754698-26754805)
chr3 (282-387)||(49607419-49607524)
chr3 (282-387)||(53982016-53982121)
chr3 (280-387)||(26141522-26141629)
chr3 (281-387)||(52629304-52629410)
chr3 (282-387)||(33644205-33644310)
chr3 (282-382)||(14623834-14623934)
chr3 (282-387)||(8076398-8076503)
chr3 (282-390)||(48587078-48587186)
chr3 (280-387)||(11347912-11348019)
chr3 (280-387)||(11907374-11907481)
chr3 (280-387)||(33118841-33118948)
chr3 (282-380)||(27714888-27714986)
chr3 (282-387)||(24699944-24700049)
chr3 (282-387)||(30801723-30801828)
chr3 (282-387)||(31456694-31456799)
chr3 (282-387)||(54868885-54868990)
chr3 (282-353)||(11095377-11095448)
chr3 (280-387)||(20764905-20765012)
chr3 (280-387)||(48375696-48375803)
chr3 (282-387)||(17470410-17470515)
chr3 (282-382)||(13898050-13898150)
chr3 (280-387)||(41189754-41189861)
chr3 (280-387)||(47531868-47531975)
chr3 (280-387)||(51419350-51419457)
chr3 (282-387)||(41080714-41080817)
chr3 (282-382)||(35536631-35536731)
chr3 (299-382)||(36331324-36331407)
chr3 (279-350)||(42823113-42823184)
chr3 (280-387)||(1758446-1758555)
chr3 (282-387)||(25407137-25407243)
chr3 (280-346)||(45058584-45058649)
chr3 (282-382)||(8956767-8956867)
chr3 (282-387)||(35965772-35965869)
chr3 (280-348)||(36331407-36331475)
chr3 (281-347)||(25395363-25395429)
chr3 (282-359)||(36707442-36707519)
[»] scaffold0316 (1 HSPs)
scaffold0316 (315-386)||(17092-17163)
[»] scaffold0018 (1 HSPs)
scaffold0018 (297-382)||(152518-152603)
[»] scaffold0237 (1 HSPs)
scaffold0237 (282-386)||(4034-4138)
[»] scaffold0321 (1 HSPs)
scaffold0321 (280-387)||(10099-10206)


Alignment Details
Target: chr5 (Bit Score: 212; Significance: 1e-116; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 18 - 253
Target Start/End: Complemental strand, 30755899 - 30755665
Alignment:
Q  18 cagaggaatcggaataaaaaagttttcgttgtttccatcattgaaagtgtacaaggttcaagatttgaagaagtgaagaaacaatcaacaatttgaagat 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30755899 cagaggaatcggaataaaaaagttttcgttgtttccatcattgaaagtgtacaaggttcaagatttgaagaagtgaagaaacaatcaacaatttgaagat 30755800  T
Q  118 tgggctgtagttcttcctaaagaggtttgattgtatatttttctttaaatactttacgtgcaacattaataaaggtttaaaacatagttggtttttaata 217  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  30755799 tgggctgtagttcttcctaaaggggtttgattgtatatttttctttaaatactttatgtgcaacattaataaaggttaaaaacatagttggtttttaata 30755700  T
Q  218 cactatcttgtgcaagtgtttctgccttacaagtgc 253  Q
    ||||||||| || |||||||||||||||||||||||    
T  30755699 cactatctt-tgtaagtgtttctgccttacaagtgc 30755665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 45 - 252
Target Start/End: Complemental strand, 30740885 - 30740678
Alignment:
Q  45 gttgtttccatcattgaaagtgtacaaggttcaagatttgaagaagtgaagaaacaatcaacaatttgaagattgggctgtagtt-cttcctaaagaggt 143  Q
    |||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||| | |||||||| |||    
T  30740885 gttgtttccatccttgaaagtg-acaaggttgaagatttgaagaagtgaagaaacaatcaacaatttgaagattaggttgtagttccctcctaaaggggt 30740787  T
Q  144 ttgattgtat-atttttctttaaatactttacgtgcaacattaataaaggtttaaaacatagttggtttttaatacactatcttgtgcaagtgtttctgc 242  Q
    |||||||||| |||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||| |  || |||| ||||||     
T  30740786 ttgattgtataatttttatttaaatactttatgtgcaacattaataaaggttaaaaacatagttggtttttaa-acactatatcatgtaagtttttctgt 30740688  T
Q  243 cttacaagtg 252  Q
    ||||||||||    
T  30740687 cttacaagtg 30740678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 2740279 - 2740384
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    ||||||||||||||||||||||||| |||| |||| |||||||||||||||||| |||||| || |||||||| |||| ||||||||||| |||||||||    
T  2740279 atgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 2740378  T
Q  382 cctctc 387  Q
     |||||    
T  2740379 tctctc 2740384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 280 - 387
Target Start/End: Original strand, 28177778 - 28177885
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    ||||||||||||||||||||||||||| |||| |||| |||||||||||||||||| |||||| |||||||| || | || |||||| |||| |||||||    
T  28177778 ttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacactttctct 28177877  T
Q  380 ttcctctc 387  Q
    || |||||    
T  28177878 tttctctc 28177885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 33149733 - 33149628
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| |||| ||||||||||||||||||  ||||| || |||||||| |||| ||||||||||| |||||||||    
T  33149733 atgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttctcttt 33149634  T
Q  382 cctctc 387  Q
     |||||    
T  33149633 tctctc 33149628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 280 - 387
Target Start/End: Original strand, 6679701 - 6679808
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||||||||| |||||||| |||| |||  |||||||||||||||||| |||||| |||||||| || | || |||||| ||||||||||||    
T  6679701 ttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacattttctct 6679800  T
Q  380 ttcctctc 387  Q
    || |||||    
T  6679801 tttctctc 6679808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 282 - 381
Target Start/End: Complemental strand, 18520979 - 18520880
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| |||| |||||||||||||||||| |||||| || |||||||| | || ||||||||||| |||||||||    
T  18520979 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 18520880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 280 - 382
Target Start/End: Complemental strand, 2252265 - 2252163
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||| |||||||||||||| |||| ||||||||||||||||||||||| ||||||||||| ||  || | || ||||||| ||| |||||||    
T  2252265 ttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 2252166  T
Q  380 ttc 382  Q
    |||    
T  2252165 ttc 2252163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 280 - 387
Target Start/End: Complemental strand, 35943989 - 35943882
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||||||| |||||||||| |||| | |  |||||||||||||||||| |||||| || || ||||| ||||  |||||||||| |||||||    
T  35943989 ttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcacactttctct 35943890  T
Q  380 ttcctctc 387  Q
    ||||||||    
T  35943889 ttcctctc 35943882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 280 - 382
Target Start/End: Complemental strand, 3921362 - 3921260
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||| ||| |||||||||| |||| ||||||||||||||||||||||| ||||||||||| ||  || | || ||||||| ||| |||||||    
T  3921362 ttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 3921263  T
Q  380 ttc 382  Q
    |||    
T  3921262 ttc 3921260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 280 - 386
Target Start/End: Original strand, 26720519 - 26720625
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    ||||||||||||||||||||||||||| |||| |||| || ||||| ||| ||||| |||||| |||| ||| || |||| ||||||||||| |||||||    
T  26720519 ttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttctct 26720618  T
Q  380 ttcctct 386  Q
    || ||||    
T  26720619 tttctct 26720625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 280 - 386
Target Start/End: Original strand, 26990268 - 26990374
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    ||||||||||||||||||||||||||| |||| |||| || ||||| ||| ||||| |||||| |||| ||| || |||| ||||||||||| |||||||    
T  26990268 ttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttctct 26990367  T
Q  380 ttcctct 386  Q
    || ||||    
T  26990368 tttctct 26990374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 35785204 - 35785309
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| |||  |||||||||||||||||| |||||| || || ||||| |||| |||||| |||| |||||||||    
T  35785204 atgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacactttctcttt 35785303  T
Q  382 cctctc 387  Q
     |||||    
T  35785304 tctctc 35785309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 36733037 - 36732932
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||| | |||| |||| |||||||||||||||||| ||||||  | |||||||| | || ||||||||||| |||||||||    
T  36733037 atgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacactttctcttt 36732938  T
Q  382 cctctc 387  Q
     |||||    
T  36732937 tctctc 36732932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 40145412 - 40145517
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| |||| || ||| ||||||||||| |||||| || |||||||| | || ||||||||||| |||||||||    
T  40145412 atgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 40145511  T
Q  382 cctctc 387  Q
     |||||    
T  40145512 tctctc 40145517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 282 - 377
Target Start/End: Original strand, 14831819 - 14831914
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttct 377  Q
    ||||||||||||||  ||||||||| |||| |||| |||||||||||| ||||| |||||| || |||||||| |||| ||||||||||| |||||    
T  14831819 atgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttct 14831914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 279 - 387
Target Start/End: Original strand, 21370016 - 21370114
Alignment:
Q  279 attatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctc 378  Q
    |||||||||||||||||||||||||||| ||||          ||||||| |||||| |||||||||||||||||| | || |||||| |||||||||||    
T  21370016 attatgatacatagacatccttaggtggtaata----------cacccactcaaaaatctgacatgtggtcacgtggaccccgcacaaacacattttctc 21370105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 380
Target Start/End: Original strand, 13811659 - 13811755
Alignment:
Q  284 gatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctctt 380  Q
    |||||||||||| |||||||||| |||| | |  |||||||||||||||||| |||||| || |||||||| | || ||||||||||| ||||||||    
T  13811659 gatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctctt 13811755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 282 - 381
Target Start/End: Complemental strand, 33825419 - 33825320
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    ||||| ||||||||| ||||||||| |||| || |||||||||||||| ||||| |||||| ||| ||| ||||| | | |||||||||| |||||||||    
T  33825419 atgatgcatagacattcttaggtggcaatacactccttgacacccacataaaaatctgacacgtgttcatgtgaaccttacacaagcacactttctcttt 33825320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 280 - 395
Target Start/End: Complemental strand, 39688994 - 39688879
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||| ||| ||||| |||| |||| | ||||||||||||||||||||| |||| |||||||||  |||| || ||| ||| ||| |||||||    
T  39688994 ttatgatacataaacacccttaagtggcaatacatcccttgacacccacacaaaaatctgatatgtggtcatatgaaccccgcataagtacactttctct 39688895  T
Q  380 ttcctctcttcatctc 395  Q
    ||| ||| ||| ||||    
T  39688894 ttcttcttttcttctc 39688879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 280 - 386
Target Start/End: Original strand, 31008991 - 31009097
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||| |||||||||||||  |||| |  | |  ||||||||||||||| |||||| || |||||||| |||| ||||||||||| ||||| |    
T  31008991 ttatgatacataaacatccttaggtgacaatacattcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctat 31009090  T
Q  380 ttcctct 386  Q
    |||||||    
T  31009091 ttcctct 31009097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 280 - 387
Target Start/End: Complemental strand, 15409707 - 15409600
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    ||||||||||||||||||||||||||  |||| |  | |||||||||||||||||| |||||| || | ||| || | || ||||||||||| | |||||    
T  15409707 ttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcacactctctct 15409608  T
Q  380 ttcctctc 387  Q
    || |||||    
T  15409607 tttctctc 15409600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 282 - 381
Target Start/End: Complemental strand, 42414397 - 42414298
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |  ||||||| |||| |||| |||||||||||||||||| |||||| || |||| ||| | || ||||||||||| ||| |||||    
T  42414397 atgatacatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttatcttt 42414298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 335
Target Start/End: Complemental strand, 36875698 - 36875645
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaa 335  Q
    |||||||||||||| |||||||||| |||| |||| ||||||||||||||||||    
T  36875698 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaa 36875645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 281 - 340
Target Start/End: Original strand, 10356638 - 10356698
Alignment:
Q  281 tatgatacatagacatccttaggtggaaatata-ccccttgacacccacacaaaaagctga 340  Q
    |||||||||||||||||||||||||| |||| | ||| |||||||||||||||||| ||||    
T  10356638 tatgatacatagacatccttaggtggcaatacatcccattgacacccacacaaaaatctga 10356698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 20073611 - 20073506
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||| ||||||||| |||| ||  |||| |||| ||||||| |||| ||||| ||  || |||  |||||| | |||||||||||||| ||||| |||    
T  20073611 atgatatatagacatcattagatgacaatacaccctttgacactcacataaaaatcttgcacgtgaccacgtggaccctgcacaagcacactttctattt 20073512  T
Q  382 cctctc 387  Q
    ||||||    
T  20073511 cctctc 20073506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 5e-35; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 280 - 387
Target Start/End: Original strand, 36208176 - 36208283
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||||||| |||||||||| |||| |  | ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  36208176 ttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcacattttctct 36208275  T
Q  380 ttcctctc 387  Q
    ||||||||    
T  36208276 ttcctctc 36208283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 282 - 390
Target Start/End: Original strand, 3434567 - 3434675
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    ||||||||||||||||||||||||| |||| |||| |||||||||||||||||| |||||| || |||||||| |||| ||||||||||| |||||||||    
T  3434567 atgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacactttctcttt 3434666  T
Q  382 cctctcttc 390  Q
     ||||||||    
T  3434667 tctctcttc 3434675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 3784000 - 3784105
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| | |  |||||||||||||||||| |||||| || |||||||| |||| ||||||||||| |||||||||    
T  3784000 atgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 3784099  T
Q  382 cctctc 387  Q
     |||||    
T  3784100 tctctc 3784105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 7389394 - 7389499
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| || | |||||||||||||||||| |||||| || |||||||| | || ||||||||||| |||||||||    
T  7389394 atgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 7389493  T
Q  382 cctctc 387  Q
     |||||    
T  7389494 tctctc 7389499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 280 - 384
Target Start/End: Original strand, 12310909 - 12311011
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||||||| ||||||||||||||||| |  | || | ||| ||||||| |||||||||||||||||| |||||| ||||||||||||| |||    
T  12310909 ttatgatacatagacacccttaggtggaaatatatc--tggatatccatacaaaaatctgacatgtggtcacgtggatcctgaacaagcacattttatct 12311006  T
Q  380 ttcct 384  Q
    |||||    
T  12311007 ttcct 12311011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 19329847 - 19329952
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    ||||||||||||||||||||||||| |||| |||  |||||||||||||||||| |||||| ||  ||||||| | || ||||||||||| |||||||||    
T  19329847 atgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttctcttt 19329946  T
Q  382 cctctc 387  Q
     |||||    
T  19329947 tctctc 19329952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 282 - 386
Target Start/End: Complemental strand, 19436282 - 19436178
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    ||||||||||||||||||||||||  |||| |||  |||||||||||||||||| |||||| || |||||||| |||| ||| ||||||| |||||||||    
T  19436282 atgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacactttctcttt 19436183  T
Q  382 cctct 386  Q
     ||||    
T  19436182 tctct 19436178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 280 - 395
Target Start/End: Original strand, 35522879 - 35522994
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||||||||||||| |||| |||| |||  || ||||||||||||||| |||||| |||| ||  || |||| ||||||||||| |||||||    
T  35522879 ttatgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacactttctct 35522978  T
Q  380 ttcctctcttcatctc 395  Q
    || |||||||| ||||    
T  35522979 tttctctcttcttctc 35522994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 280 - 387
Target Start/End: Original strand, 41423685 - 41423792
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||||||||| |||| ||| |||| ||| ||||||||  ||||||||| |||||||||||||||||  |||| | ||||||| |||||||||    
T  41423685 ttatgatacatagacatcattagatggtaatacacctcttgacacttacacaaaaatctgacatgtggtcacgtagatcccgtacaagcatattttctct 41423784  T
Q  380 ttcctctc 387  Q
    ||| ||||    
T  41423785 ttcatctc 41423792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 8080478 - 8080373
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| |||| |||||||| ||| ||||| |||||| || |||||||| | || ||||||||||| |||||||||    
T  8080478 atgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 8080379  T
Q  382 cctctc 387  Q
     |||||    
T  8080378 tctctc 8080373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 38267045 - 38267150
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| ||||| |||  |||| |||| |||||||||||||||||| |||||| || |||||||| | || ||||||||||| |||||||||    
T  38267045 atgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 38267144  T
Q  382 cctctc 387  Q
     |||||    
T  38267145 tctctc 38267150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 282 - 386
Target Start/End: Complemental strand, 36362008 - 36361904
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| | || |||||||||||||||||| |||||| || |||||||| | ||  |||||||||| |||||||||    
T  36362008 atgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttctcttt 36361909  T
Q  382 cctct 386  Q
     ||||    
T  36361908 tctct 36361904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 282 - 386
Target Start/End: Original strand, 36362031 - 36362135
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| | || |||||||||||||||||| |||||| || |||||||| | ||  |||||||||| |||||||||    
T  36362031 atgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttctcttt 36362130  T
Q  382 cctct 386  Q
     ||||    
T  36362131 tctct 36362135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 280 - 387
Target Start/End: Original strand, 18207183 - 18207289
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||||||| |||||||||| |||| ||| ||||||||||| ||||||| || ||| |||| |||||||| ||  |||||||||| |||||||    
T  18207183 ttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgtgg-cacgtgaaccccacacaagcacactttctct 18207281  T
Q  380 ttcctctc 387  Q
    ||| ||||    
T  18207282 ttcatctc 18207289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 280 - 387
Target Start/End: Original strand, 21234404 - 21234511
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    ||||||||||||||||||||||||||  |||| |||| ||||||| ||||||||||  ||||| || | ||| || | || |||||||||||||||||||    
T  21234404 ttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcacattttctct 21234503  T
Q  380 ttcctctc 387  Q
    | ||||||    
T  21234504 tacctctc 21234511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 280 - 347
Target Start/End: Complemental strand, 32564523 - 32564456
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtgg 347  Q
    |||||||||||| |||| ||||||||| |||| ||||||||||||||||||||||| |||||||||||    
T  32564523 ttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgg 32564456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 280 - 387
Target Start/End: Complemental strand, 46033898 - 46033791
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||||| || ||||||||| |||| |||| || ||||||||| ||||| |||||| |||||||| ||||  | ||||||||| |||||||||    
T  46033898 ttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagcatattttctct 46033799  T
Q  380 ttcctctc 387  Q
    || |||||    
T  46033798 tttctctc 46033791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 346
Target Start/End: Original strand, 22343364 - 22343430
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtg 346  Q
    |||||||||||| ||| |||||||||| |||| ||||||||||||||||||||||| ||||||||||    
T  22343364 ttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtg 22343430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 382
Target Start/End: Original strand, 41915744 - 41915846
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||| ||| |||||||||| |||| ||||||||||||| ||||||||| ||||||||||| ||  || | || ||||||| ||| |||||||    
T  41915744 ttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 41915843  T
Q  380 ttc 382  Q
    |||    
T  41915844 ttc 41915846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 35137538 - 35137643
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||| ||||||| |||||||||| |||| |||| |||||||||||||||||| || ||| || |||||||| | || |||||| |||| |||||||||    
T  35137538 atgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacacactttctcttt 35137637  T
Q  382 cctctc 387  Q
     |||||    
T  35137638 tctctc 35137643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 38837222 - 38837327
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| |||| |  ||||| ||||||||| |||||| || |||||||| | || ||||||||||| |||||||||    
T  38837222 atgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 38837321  T
Q  382 cctctc 387  Q
     |||||    
T  38837322 tctctc 38837327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 40957712 - 40957817
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    ||||||||||||||  ||||||||| |||| || | |||| ||||||||||||| |||||| || |||||||| |||| | ||||||||| |||||||||    
T  40957712 atgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcacactttctcttt 40957811  T
Q  382 cctctc 387  Q
     |||||    
T  40957812 tctctc 40957817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 372
Target Start/End: Complemental strand, 46374899 - 46374807
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacat 372  Q
    ||||||||||||||||||||||||||| || | |||| || ||||||||||||||| |||||| |||| ||| || | || ||||||||||||    
T  46374899 ttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacat 46374807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 280 - 382
Target Start/End: Original strand, 38044200 - 38044302
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||| ||| |||||||||| |||| ||||||||||| ||||||||||| ||||||||| | ||  || | || ||||||| ||| |||||||    
T  38044200 ttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaagtacactttctct 38044299  T
Q  380 ttc 382  Q
    |||    
T  38044300 ttc 38044302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 10343658 - 10343553
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| ||||||||||||||| ||  ||||||||||||||||||| ||||||  || |  |||| |  ||||| | ||||| |||||||||    
T  10343658 atgatacatagacacccttaggtggaaatacacatcttgacacccacacaaaaatctgacacatgtttccgtggactctgcagacgcacactttctcttt 10343559  T
Q  382 cctctc 387  Q
    ||||||    
T  10343558 cctctc 10343553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 280 - 345
Target Start/End: Complemental strand, 40846210 - 40846145
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgt 345  Q
    |||||||||||| |||||||||||||| |||| ||||||||||| ||||||||||| || ||||||    
T  40846210 ttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatctaacatgt 40846145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 282 - 381
Target Start/End: Complemental strand, 4999609 - 4999510
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||| ||| |||| |||  |||||||||||||||||| |||| | || |||||||| | || |||||| |||| |||||||||    
T  4999609 atgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacactttctcttt 4999510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 280 - 382
Target Start/End: Original strand, 8238215 - 8238318
Alignment:
Q  280 ttatgatacatagacatcct-taggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctc 378  Q
    |||||||||||| ||| ||| ||||||| |||| |||| |||||||||||||||||| ||||||||| ||||  || | || ||||||| ||| ||||||    
T  8238215 ttatgatacataaacaccctgtaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaagtacactttctc 8238314  T
Q  379 tttc 382  Q
    ||||    
T  8238315 tttc 8238318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 280 - 387
Target Start/End: Original strand, 26296647 - 26296754
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    ||||||||||||||||||||||||||  ||||||||| || ||| ||||| ||||| |||| | |||| ||  || | || |||||||| ||||||||||    
T  26296647 ttatgatacatagacatccttaggtgacaatataccctttaacatccacataaaaatctgatacgtggccatatggaccccgcacaagcgcattttctct 26296746  T
Q  380 ttcctctc 387  Q
    || |||||    
T  26296747 tttctctc 26296754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 313 - 387
Target Start/End: Complemental strand, 27744373 - 27744299
Alignment:
Q  313 accccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctctttcctctc 387  Q
    |||| |||| ||||||||||||| ||||||||||| |||||| ||||  || ||||||||||||||| |||||||    
T  27744373 accctttgatacccacacaaaaatctgacatgtggccacgtggatccctcataagcacattttctctatcctctc 27744299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 3694372 - 3694477
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||| ||| ||| |||||||||  |||| |||  || ||||||||||||||| |||||| || |||| ||| |||| ||||||||||| |||||||||    
T  3694372 atgatatatacacacccttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcacactttctcttt 3694471  T
Q  382 cctctc 387  Q
     |||||    
T  3694472 tctctc 3694477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 280 - 347
Target Start/End: Complemental strand, 39256020 - 39255953
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtgg 347  Q
    |||||||||||||||| |||||||||| |||| ||| ||||| ||||| ||||||| |||||| ||||    
T  39256020 ttatgatacatagacaaccttaggtggcaatacaccacttgatacccatacaaaaatctgacacgtgg 39255953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 350
Target Start/End: Original strand, 7727909 - 7727979
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtca 350  Q
    |||||||||||| ||| |||||||||| |||| ||| |||||||  |||| ||||| ||||||||||||||    
T  7727909 ttatgatacataaacacccttaggtggtaatacacctcttgacattcacataaaaatctgacatgtggtca 7727979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 389
Target Start/End: Complemental strand, 16374886 - 16374812
Alignment:
Q  315 cccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctctttcctctctt 389  Q
    ||||||||| ||||||||||| |||||| ||||||||||| |||   ||||||||||  ||||||||| ||||||    
T  16374886 cccttgacatccacacaaaaatctgacacgtggtcacgtggatctcacacaagcacacattctctttcatctctt 16374812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 384
Target Start/End: Complemental strand, 35468950 - 35468848
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    ||||||||||||||||||||| ||| |||| | |  |||||||||||| ||||| || | |||||  || ||| | ||||||||| |||| |||||||||    
T  35468950 atgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatctaatatgtgaccatgtggaccctgcacaaacacactttctcttt 35468851  T
Q  382 cct 384  Q
    |||    
T  35468850 cct 35468848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 2318338 - 2318233
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||  ||| || ||||||| || | ||| ||||||||||||||||||| ||||| |||||||||||| | ||  || ||||| | |||||||||    
T  2318338 atgatacattaacaaccataggtggcaagacacctcttgacacccacacaaaaatctgacgtgtggtcacgtggacccgacataagcatactttctcttt 2318239  T
Q  382 cctctc 387  Q
    | ||||    
T  2318238 catctc 2318233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 280 - 333
Target Start/End: Original strand, 31735887 - 31735940
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaa 333  Q
    ||||||||||||||||||||||||||| |||| || | || |||||||||||||    
T  31735887 ttatgatacatagacatccttaggtggcaatacactctttaacacccacacaaa 31735940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 32951588 - 32951483
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    ||||||||||||||  ||||| ||  |||| | || || ||| ||||||||||| || ||| || |||||||| | || ||||||||||| |||||||||    
T  32951588 atgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctcttt 32951489  T
Q  382 cctctc 387  Q
     |||||    
T  32951488 tctctc 32951483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 3e-30; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 280 - 387
Target Start/End: Original strand, 31976251 - 31976358
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||||||||| |||||| |||||||| |||| || ||||||||||| |||||||    
T  31976251 ttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacactttctct 31976350  T
Q  380 ttcctctc 387  Q
    || |||||    
T  31976351 tttctctc 31976358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 32869685 - 32869788
Alignment:
Q  284 gatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctctttcc 383  Q
    |||||||||||| |||||||||| |||| |||| |||||||||||||||||| |||||| || |||||||| | || ||||||||||| ||||||||| |    
T  32869685 gatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttc 32869784  T
Q  384 tctc 387  Q
    ||||    
T  32869785 tctc 32869788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 22880753 - 22880648
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| |||| |||||||||||||||||  |||||| || |||||||| | || ||||||||||| |||||||||    
T  22880753 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 22880654  T
Q  382 cctctc 387  Q
     |||||    
T  22880653 tctctc 22880648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 280 - 382
Target Start/End: Complemental strand, 15508121 - 15508019
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||| ||| |||||||||| |||| ||||||||||||||||||||||| ||||||||||| ||  || | || ||||||| ||| |||||||    
T  15508121 ttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 15508022  T
Q  380 ttc 382  Q
    |||    
T  15508021 ttc 15508019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 280 - 382
Target Start/End: Complemental strand, 15990139 - 15990037
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||| ||| |||||||||| |||| ||||||||||||||||||||||| ||||||||||| ||  || | || ||||||| ||| |||||||    
T  15990139 ttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 15990040  T
Q  380 ttc 382  Q
    |||    
T  15990039 ttc 15990037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 280 - 382
Target Start/End: Complemental strand, 30341457 - 30341355
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||| ||| |||||||||| |||| ||||||||||||||||||||||| ||||||||||| ||  || | || ||||||| ||| |||||||    
T  30341457 ttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 30341358  T
Q  380 ttc 382  Q
    |||    
T  30341357 ttc 30341355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 17598559 - 17598664
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| | |  |||||||||||||||||| |||||| || |||||||| | || ||||||||||| |||||||||    
T  17598559 atgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcacactttctcttt 17598658  T
Q  382 cctctc 387  Q
     |||||    
T  17598659 tctctc 17598664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 11427621 - 11427728
Alignment:
Q  282 atgatacatagacatcct--taggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||||| |||  ||||||| |||| | || |||||||||||||||||| |||||| || |||||||| |||| ||||||||||| |||||||    
T  11427621 atgatacatagacaccctcttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctct 11427720  T
Q  380 ttcctctc 387  Q
    || |||||    
T  11427721 tttctctc 11427728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 282 - 346
Target Start/End: Complemental strand, 31953125 - 31953061
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtg 346  Q
    |||||| |||||||||||||||||| |||| ||||||||||||||||| ||||| ||||||||||    
T  31953125 atgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtg 31953061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 12732487 - 12732592
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    ||||||||||||||| |||| |||| ||||||  | |||||||||||||||||| |||||| ||||  | ||| ||||  || |||||||||||||||||    
T  12732487 atgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacacgtggctatgtggatcccacataagcacattttctcttt 12732586  T
Q  382 cctctc 387  Q
    | ||||    
T  12732587 catctc 12732592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 282 - 342
Target Start/End: Complemental strand, 28536581 - 28536521
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgaca 342  Q
    |||||||||| |||||||||||||| |||| | ||||||||||||||||||||| ||||||    
T  28536581 atgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgaca 28536521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 946383 - 946486
Alignment:
Q  284 gatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctctttcc 383  Q
    ||||||||||||||||||||||  |||| |||| |||||||| || |||||| ||||||  | ||||||| ||||| || | |||||| ||||||||| |    
T  946383 gatacatagacatccttaggtgataatacaccctttgacacctacccaaaaatctgacacctagtcacgtaaatcccgctctagcacactttctcttttc 946482  T
Q  384 tctc 387  Q
    ||||    
T  946483 tctc 946486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 282 - 381
Target Start/End: Original strand, 15832582 - 15832681
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| | |||||||  |||| | |  ||||||||||||||||||  ||||| || |||||||| |||||||||||  |||||||||||||    
T  15832582 atgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaaatacattttctcttt 15832681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 280 - 386
Target Start/End: Complemental strand, 31110856 - 31110752
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    ||||||||||||||||||||||||||| |||| |||| ||||||  | |||||||| |||||| ||   ||| || | |||||||||||||| |||||||    
T  31110856 ttatgatacatagacatccttaggtggcaatacaccctttgaca--ctcacaaaaatctgacacgtaaccacatggaccctgcacaagcacactttctct 31110759  T
Q  380 ttcctct 386  Q
    || ||||    
T  31110758 tttctct 31110752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 280 - 382
Target Start/End: Original strand, 4231551 - 4231653
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    ||||||| |||| ||||| |||||||| |||| |||||||| |||||||||||||| |||||| |||| ||  || | || ||||||| ||| |||||||    
T  4231551 ttatgattcataaacatcattaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaagtacactttctct 4231650  T
Q  380 ttc 382  Q
    |||    
T  4231651 ttc 4231653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 6209560 - 6209455
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| ||   ||||||| |||||||||| ||| || || |||||||| | || |||| |||||| |||||||||    
T  6209560 atgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcacactttctcttt 6209461  T
Q  382 cctctc 387  Q
     |||||    
T  6209460 tctctc 6209455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 382
Target Start/End: Complemental strand, 9379808 - 9379707
Alignment:
Q  281 tatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctctt 380  Q
    |||||||||||||||||||||| ||  |||| | ||||||||||||| |||||||  ||||| |||| || ||| |||   ||||| |||||||||||||    
T  9379808 tatgatacatagacatccttagatgacaatacatcccttgacacccatacaaaaatttgacacgtggccatgtggatctcacacaaacacattttctctt 9379709  T
Q  381 tc 382  Q
    ||    
T  9379708 tc 9379707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 387
Target Start/End: Complemental strand, 23128186 - 23128117
Alignment:
Q  318 ttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctctttcctctc 387  Q
    |||||||||||||||||| |||||| || |||||||| ||||  |||||||||| ||||||||| |||||    
T  23128186 ttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactttctcttttctctc 23128117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 282 - 386
Target Start/End: Original strand, 29857832 - 29857936
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| | |||| ||| |||| |||  || ||||||||||||||| |||||| || || ||||| |||| ||| ||||||| |||||||||    
T  29857832 atgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttctcttt 29857931  T
Q  382 cctct 386  Q
     ||||    
T  29857932 tctct 29857936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 387
Target Start/End: Original strand, 30870058 - 30870124
Alignment:
Q  321 acacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctctttcctctc 387  Q
    ||||||| | ||||| || |||||||||||| || | || |||||||||||||||||||||||||||    
T  30870058 acacccatataaaaatctaacatgtggtcacatggaccccgcacaagcacattttctctttcctctc 30870124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 387
Target Start/End: Complemental strand, 31109488 - 31109390
Alignment:
Q  289 atagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctctttcctctc 387  Q
    ||||||| |||||||||| |||| |||| |||||| ||||||||||| |||||| || |||||||  | || ||| ||| ||| ||||||||| |||||    
T  31109488 atagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcacgtagaccccgcaaaagtacactttctcttttctctc 31109390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 343
Target Start/End: Complemental strand, 22422113 - 22422052
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacat 343  Q
    ||||||||||||||||||||||||| |||| | | |||||||| || ||||||  |||||||    
T  22422113 atgatacatagacatccttaggtggcaatagatctcttgacactcatacaaaattctgacat 22422052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 5e-29; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 6034049 - 6034154
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| |||| |||||||||||||||||| ||||||||| |||||||| |||| ||||||||||| |||||||||    
T  6034049 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctcttt 6034148  T
Q  382 cctctc 387  Q
     |||||    
T  6034149 tctctc 6034154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 50052523 - 50052418
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    ||||||||||||||||||||||||| |||| |||| |||||||||||||||||| |||||| || |||||||| | || ||||||||||| |||||||||    
T  50052523 atgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 50052424  T
Q  382 cctctc 387  Q
    ||||||    
T  50052423 cctctc 50052418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 50526266 - 50526161
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||||| |||||||| |||| |||| |||||||||||||||||| |||||| ||||||||||| || | ||||||||||  ||||| |||    
T  50526266 atgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcacgctttctattt 50526167  T
Q  382 cctctc 387  Q
    ||||||    
T  50526166 cctctc 50526161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 280 - 382
Target Start/End: Complemental strand, 50813989 - 50813887
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||| |||  ||||||||| |||| ||||||||||||||||||||||| ||||||||||||||  |||| || ||||||| ||| |||||||    
T  50813989 ttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaagtacactttctct 50813890  T
Q  380 ttc 382  Q
    |||    
T  50813889 ttc 50813887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 48183144 - 48183039
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| ||||| |||| |||| |||| |||||||||||||||||| |||||| || |||||||| | || ||||||||||| |||||||||    
T  48183144 atgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 48183045  T
Q  382 cctctc 387  Q
     |||||    
T  48183044 tctctc 48183039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 282 - 386
Target Start/End: Complemental strand, 11511557 - 11511453
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| |||| |||||||||||| ||||| |||||| || |||||||| | || ||||||||||| |||||||||    
T  11511557 atgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 11511458  T
Q  382 cctct 386  Q
     ||||    
T  11511457 tctct 11511453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 280 - 382
Target Start/End: Original strand, 55475194 - 55475296
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||| |||||||||||||| |||| |||| |||||||||||||||||| ||||||||||| ||  || | |||||| ||| ||| |||||||    
T  55475194 ttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtggccatatggaccctgcataagtacactttctct 55475293  T
Q  380 ttc 382  Q
    |||    
T  55475294 ttc 55475296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 480542 - 480437
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||  |||| |||| |||||||||||||||||| |||||| || |||||||| | || | ||||||||| |||||||||    
T  480542 atgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttt 480443  T
Q  382 cctctc 387  Q
     |||||    
T  480442 tctctc 480437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 41236352 - 41236457
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| |||  |||||| ||||||||||| |||||| || |||||||| | || ||||||||||| |||||||||    
T  41236352 atgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 41236451  T
Q  382 cctctc 387  Q
     |||||    
T  41236452 tctctc 41236457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 280 - 347
Target Start/End: Complemental strand, 29548056 - 29547989
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtgg 347  Q
    |||||||||||| |||||||||||||| |||| | ||||||||||||||||||||| |||||||||||    
T  29548056 ttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgacatgtgg 29547989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 280 - 387
Target Start/End: Original strand, 40574782 - 40574889
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    ||||||||||||||||||||||||||| |||| |||| |||||||||||||||||| |||||| |  |  || || |||| | ||||||||| |||||||    
T  40574782 ttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgctgctacatggatcccgaacaagcacactttctct 40574881  T
Q  380 ttcctctc 387  Q
    || |||||    
T  40574882 tttctctc 40574889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 382
Target Start/End: Complemental strand, 19670813 - 19670711
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||| ||| |||||||||| |||| |||||||||||| |||||||||| ||||||||||| ||  || | || ||||||| ||| |||||||    
T  19670813 ttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 19670714  T
Q  380 ttc 382  Q
    |||    
T  19670713 ttc 19670711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 382
Target Start/End: Original strand, 32766961 - 32767063
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||| |||  ||||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||  || | |||||||||| ||| |||||||    
T  32766961 ttatgatacataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgacatgtggccatatggaccctgcacaagtacactttctct 32767060  T
Q  380 ttc 382  Q
    |||    
T  32767061 ttc 32767063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 29239891 - 29239996
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| |||  |||||| ||||||||||| || ||| || |||||||| | ||  |||||||||| |||||||||    
T  29239891 atgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacactttctcttt 29239990  T
Q  382 cctctc 387  Q
    ||||||    
T  29239991 cctctc 29239996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 42044462 - 42044357
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| | || |  ||||||||||||||| |||||| || |||||||| | || ||||||||||| |||||||||    
T  42044462 atgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 42044363  T
Q  382 cctctc 387  Q
     |||||    
T  42044362 tctctc 42044357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 387
Target Start/End: Complemental strand, 56300224 - 56300155
Alignment:
Q  318 ttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctctttcctctc 387  Q
    |||||| ||||||||||| ||||||||||||||  |||||||||||||| |||| |||||||||||||||    
T  56300224 ttgacatccacacaaaaatctgacatgtggtcatatgaatcctgcacaaacacactttctctttcctctc 56300155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 282 - 385
Target Start/End: Original strand, 3481659 - 3481762
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| | |||||||| |||| || | |||||||||||||||||| ||||||  | |||||||| | ||  |||||||||| |||||||||    
T  3481659 atgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcacactttctcttt 3481758  T
Q  382 cctc 385  Q
    ||||    
T  3481759 cctc 3481762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 280 - 387
Target Start/End: Original strand, 31910195 - 31910302
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    ||||||||||||||||||||||||||  |||| || | |||||||||||||||||| ||||||  | | ||| || | || ||||||||||| |||||||    
T  31910195 ttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcacactttctct 31910294  T
Q  380 ttcctctc 387  Q
    || |||||    
T  31910295 tttctctc 31910302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 280 - 382
Target Start/End: Original strand, 47986211 - 47986313
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||| ||| |||||||||| |||| | ||||||||| ||||||||||| ||||||||||| ||  || | || ||||||| ||| |||||||    
T  47986211 ttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 47986310  T
Q  380 ttc 382  Q
    |||    
T  47986311 ttc 47986313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 297 - 382
Target Start/End: Complemental strand, 17983823 - 17983738
Alignment:
Q  297 ccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctctttc 382  Q
    |||||||||| |||| ||||||||||||||||||||||| ||||||||||| ||  || | || ||||||| ||| ||||||||||    
T  17983823 ccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttc 17983738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 24995202 - 24995097
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||| || |||| |||||| ||| |||| |||| |||||||||||| |||||  ||||| || |||||||| | || |||||||||||||||||||||    
T  24995202 atgatatatggacacccttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcacattttctcttt 24995103  T
Q  382 cctctc 387  Q
     |||||    
T  24995102 tctctc 24995097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 29234340 - 29234235
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||| ||| |||| |||| |||| |||  |||||||| |||||| || |||||||| | || ||||||||||| |||||||||    
T  29234340 atgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 29234241  T
Q  382 cctctc 387  Q
     |||||    
T  29234240 tctctc 29234235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 54473628 - 54473523
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||  |||| |||  |||||||||||||||||| || ||| || |||||||| | || ||||||||||| ||| |||||    
T  54473628 atgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttatcttt 54473529  T
Q  382 cctctc 387  Q
     |||||    
T  54473528 tctctc 54473523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 280 - 387
Target Start/End: Complemental strand, 48647823 - 48647716
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||| ||||| ||||||||||||   |||| ||| ||| ||||||||| ||||| || ||| ||||||||||| |  | ||||||||||| |||||||    
T  48647823 ttatgacacataaacatccttaggtaacaatacacctcttaacacccacataaaaatctaacacgtggtcacgtggactccgcacaagcacaatttctct 48647724  T
Q  380 ttcctctc 387  Q
    ||||||||    
T  48647723 ttcctctc 48647716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 280 - 347
Target Start/End: Complemental strand, 55079811 - 55079744
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtgg 347  Q
    |||||||||||| ||| |||||||||| |||| ||| ||||||||||| ||||||| |||||||||||    
T  55079811 ttatgatacataaacacccttaggtggcaatacacctcttgacacccatacaaaaatctgacatgtgg 55079744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 387
Target Start/End: Complemental strand, 18769103 - 18769037
Alignment:
Q  321 acacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctctttcctctc 387  Q
    ||||||||||||||| |||||||||||||| || |||||  ||||| ||||||||||||||| ||||    
T  18769103 acacccacacaaaaatctgacatgtggtcatgtaaatcccacacaaacacattttctctttcatctc 18769037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 280 - 347
Target Start/End: Complemental strand, 8343260 - 8343193
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtgg 347  Q
    |||||||||||| |||||||||||||| |||| | || |||||||| ||| ||||| |||||||||||    
T  8343260 ttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgacatgtgg 8343193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 282 - 381
Target Start/End: Original strand, 23608240 - 23608339
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||| ||||||| |||||| ||  |||| |||  |||||||||||||||||| |||||| || ||||||||||  |  |||||||||| |||||||||    
T  23608240 atgatatatagacacccttagatgacaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcacactttctcttt 23608339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 395
Target Start/End: Original strand, 41823926 - 41824000
Alignment:
Q  321 acacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctctttcctctcttcatctc 395  Q
    ||||||||||||||| |||||| || ||||| || | || ||||||||||| ||||||||| |||||||| ||||    
T  41823926 acacccacacaaaaatctgacacgtagtcacatggaccccgcacaagcacactttctcttttctctcttcttctc 41824000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 382
Target Start/End: Original strand, 29977890 - 29977990
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||| | | || ||||||| |||| ||||||| ||||||||||||||| |||||| || ||||  || | ||  |||||||||| |||||||||    
T  29977890 atgatacatacagaaccataggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacactttctcttt 29977989  T
Q  382 c 382  Q
    |    
T  29977990 c 29977990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 280 - 347
Target Start/End: Complemental strand, 18924592 - 18924525
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtgg 347  Q
    ||||||| |||| | | |||||||||| |||| ||||||||| | ||||||||||| |||||||||||    
T  18924592 ttatgatccataaatacccttaggtggcaatacaccccttgatatccacacaaaaatctgacatgtgg 18924525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 350
Target Start/End: Complemental strand, 44536842 - 44536773
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtca 350  Q
    |||||||||||| |||   |||||||| |||| |||| |||||| ||||||||||| ||||||||||||||    
T  44536842 ttatgatacataaacacttttaggtggcaatacaccc-ttgacatccacacaaaaatctgacatgtggtca 44536773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 3e-27; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 280 - 386
Target Start/End: Complemental strand, 26891601 - 26891495
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    ||||||||||||| || |||||||||| |||| |||||| |||||||||||||||| |||||||||||||||||| | |  | |||||||||||||||||    
T  26891601 ttatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacctcgaacaagcacattttctct 26891502  T
Q  380 ttcctct 386  Q
    |||||||    
T  26891501 ttcctct 26891495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 280 - 387
Target Start/End: Complemental strand, 40613999 - 40613892
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    ||||||||||||||||||||||||||| |||| |||| |||||||||||||||||| |||||| |||| ||| || | || ||||||||||| |||||||    
T  40613999 ttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacactttctct 40613900  T
Q  380 ttcctctc 387  Q
    || |||||    
T  40613899 tttctctc 40613892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 17473025 - 17473130
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||| ||| |||| |||| |||||||||||||||||| |||||| || |||||||| |||| ||||||||||| |||||||||    
T  17473025 atgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 17473124  T
Q  382 cctctc 387  Q
     |||||    
T  17473125 tctctc 17473130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 33436195 - 33436090
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| |||| |||||||||||||||||| || ||| || |||||||| | || ||||||||||| |||||||||    
T  33436195 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctcttt 33436096  T
Q  382 cctctc 387  Q
    ||||||    
T  33436095 cctctc 33436090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 280 - 387
Target Start/End: Complemental strand, 17820101 - 17819994
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||||||| |  ||||||| |||| ||||||||||||||||||||||| |||||||||||| ||||| | ||  ||||| ||||||||||||    
T  17820101 ttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaacacattttctct 17820002  T
Q  380 ttcctctc 387  Q
    ||| ||||    
T  17820001 ttcatctc 17819994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 282 - 381
Target Start/End: Original strand, 28863460 - 28863559
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| |||| |||||||||||||||||| |||||| || |||||||| | || ||||||||||| |||||||||    
T  28863460 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 28863559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 9058485 - 9058590
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| |||| |||||||||||||||||| |||||| || |||| ||| | || ||||||||||| |||||||||    
T  9058485 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctcttt 9058584  T
Q  382 cctctc 387  Q
     |||||    
T  9058585 tctctc 9058590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 283 - 387
Target Start/End: Original strand, 3439985 - 3440089
Alignment:
Q  283 tgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctctttc 382  Q
    |||||| |||||| |||||||||| |||| || ||| |||||||||||||||| || ||||||| | ||||| | || ||||||||||||||||||||||    
T  3439985 tgatacgtagacacccttaggtggcaatacactcctggacacccacacaaaaatctaacatgtgattacgtggaccccgcacaagcacattttctctttc 3440084  T
Q  383 ctctc 387  Q
    |||||    
T  3440085 ctctc 3440089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 282 - 386
Target Start/End: Complemental strand, 5574583 - 5574479
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    ||||||||||||||  ||||||||| |||| |||| |||||||||||| ||||| |||||| || |||||||| |||| ||||||||||| |||||||||    
T  5574583 atgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 5574484  T
Q  382 cctct 386  Q
     ||||    
T  5574483 tctct 5574479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 395
Target Start/End: Complemental strand, 7465830 - 7465717
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||| ||| |||| |||| |||||||||||||||||| |||||| || |||||||| | ||  |||||||||| |||||||||    
T  7465830 atgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttctcttt 7465731  T
Q  382 cctctcttcatctc 395  Q
      ||||||| ||||    
T  7465730 tatctcttcttctc 7465717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 10249477 - 10249372
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||  |||| |||  |||||||||||||||||| |||||| || |||||||| | || ||||||||||| |||||||||    
T  10249477 atgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 10249378  T
Q  382 cctctc 387  Q
     |||||    
T  10249377 tctctc 10249372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 13438348 - 13438453
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||  |||| | || |||||||||||||||||| |||||| || |||||||| | || ||||||||||| |||||||||    
T  13438348 atgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 13438447  T
Q  382 cctctc 387  Q
     |||||    
T  13438448 tctctc 13438453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 20700820 - 20700925
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||||||||| |||| |||| |||| ||||| || ||||||||| |||||| || |||||||| | || ||| ||||||| |||||||||    
T  20700820 atgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttctcttt 20700919  T
Q  382 cctctc 387  Q
    ||||||    
T  20700920 cctctc 20700925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 382
Target Start/End: Complemental strand, 45097832 - 45097730
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||| |||||||||||||| |||| | ||||||||||||| ||||||| ||||||||||| ||  || | || ||||||| ||| |||||||    
T  45097832 ttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 45097733  T
Q  380 ttc 382  Q
    |||    
T  45097732 ttc 45097730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 19930915 - 19930810
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| |||| |||||| ||||||||||| |||||| || |||| ||| | || |||||| |||| |||||||||    
T  19930915 atgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacactttctcttt 19930816  T
Q  382 cctctc 387  Q
     |||||    
T  19930815 tctctc 19930810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 30915468 - 30915573
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| |||| ||||| |||||| ||||| |||||| || |||||||| | || | ||||||||| |||||||||    
T  30915468 atgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttt 30915567  T
Q  382 cctctc 387  Q
     |||||    
T  30915568 tctctc 30915573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 32505743 - 32505638
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||  |||| |||  |||||||||||||||||| |||||| || |||||||| | || ||||||||||| ||||| |||    
T  32505743 atgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctattt 32505644  T
Q  382 cctctc 387  Q
     |||||    
T  32505643 tctctc 32505638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 40701483 - 40701588
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| |||  |||||||||||||||||| |||||| || || ||||| | || |||||| |||| |||||||||    
T  40701483 atgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttctcttt 40701582  T
Q  382 cctctc 387  Q
     |||||    
T  40701583 tctctc 40701588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 320 - 387
Target Start/End: Original strand, 3737986 - 3738053
Alignment:
Q  320 gacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctctttcctctc 387  Q
    |||||||||||||||| |||||||||||||| ||| | || ||||||||||||||||| |||||||||    
T  3737986 gacacccacacaaaaatctgacatgtggtcatgtggaccccgcacaagcacattttctttttcctctc 3738053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 280 - 387
Target Start/End: Original strand, 42257196 - 42257303
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||||||||| |||||||| |||| | |  |||||||||||| ||||| |||||| |||| ||| || | || ||||||||||| |||||||    
T  42257196 ttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcacactttctct 42257295  T
Q  380 ttcctctc 387  Q
    || |||||    
T  42257296 tttctctc 42257303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 280 - 347
Target Start/End: Original strand, 43490124 - 43490191
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtgg 347  Q
    |||||||||||| ||| |||||||||  |||| ||||||||||||||||||||||| |||||||||||    
T  43490124 ttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgacatgtgg 43490191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 280 - 382
Target Start/End: Original strand, 38732357 - 38732459
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||| ||| ||||| |||  |||| | ||||||||||||||||||||| ||||||||||||||  || | || ||||||| ||| |||||||    
T  38732357 ttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttctct 38732456  T
Q  380 ttc 382  Q
    |||    
T  38732457 ttc 38732459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 41575142 - 41575248
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgt-gaatcctgcacaagcacattttctctt 380  Q
    ||||||||||||||||||||| ||| |||| |||| ||||||  ||||||||||  ||||||||||||| || ||  ||| |||||||||| ||||||||    
T  41575142 atgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgacatgtggtcatgtggacccctacacaagcacactttctctt 41575241  T
Q  381 tcctctc 387  Q
    || ||||    
T  41575242 tcatctc 41575248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 297 - 382
Target Start/End: Complemental strand, 2997567 - 2997482
Alignment:
Q  297 ccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctctttc 382  Q
    |||||||||| |||| ||||||||||||||||||||||| ||||||||||| ||  || | || ||||||| ||| ||||||||||    
T  2997567 ccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttc 2997482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 28381750 - 28381645
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| |||  | |||||||||||||||| |||||| || ||||| || |  | ||||||||||| |||||||||    
T  28381750 atgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcacactttctcttt 28381651  T
Q  382 cctctc 387  Q
     |||||    
T  28381650 tctctc 28381645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 282 - 382
Target Start/End: Original strand, 27864709 - 27864809
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| ||||| |||| |||| |||| |||||| ||||||||||| |||||| ||  ||||||| | || ||| ||||||| |||||||||    
T  27864709 atgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcacactttctcttt 27864808  T
Q  382 c 382  Q
    |    
T  27864809 c 27864809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 280 - 387
Target Start/End: Complemental strand, 15428837 - 15428730
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||| ||||||||| ||||  ||| ||||||| |||| |||||||||| ||||||||||| || || || ||  | ||| ||||||||||||    
T  15428837 ttatgatacataaacatccttatgtggccatacaccccttaacactcacacaaaaatctgacatgtggccatgtaaaccccacgcaaacacattttctct 15428738  T
Q  380 ttcctctc 387  Q
    ||| ||||    
T  15428737 ttcatctc 15428730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 280 - 387
Target Start/End: Complemental strand, 38273239 - 38273132
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    ||||||||||||||||| ||||| ||| |||| |||| || ||||||||||||||| |||||| || | ||| || | || |||| |||||| |||||||    
T  38273239 ttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcacactttctct 38273140  T
Q  380 ttcctctc 387  Q
    || |||||    
T  38273139 tttctctc 38273132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 384
Target Start/End: Original strand, 33436216 - 33436318
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    ||||||||||||||||||||| ||| |||| |||  |||||||||||| ||||| |||||| |||  || ||| |   |||||||||||| |||||||||    
T  33436216 atgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacgtgaccatgtggactttgcacaagcacactttctcttt 33436315  T
Q  382 cct 384  Q
    |||    
T  33436316 cct 33436318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 4060690 - 4060795
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||  |||| |||  |||||| ||||||||||| |||||| || || ||||| |||| ||| ||||||| ||||| |||    
T  4060690 atgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttcttttt 4060789  T
Q  382 cctctc 387  Q
     |||||    
T  4060790 tctctc 4060795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 297 - 346
Target Start/End: Original strand, 13365373 - 13365422
Alignment:
Q  297 ccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtg 346  Q
    |||||| ||| |||||||||||||||||||||||||||| ||||||||||    
T  13365373 ccttagatggcaatataccccttgacacccacacaaaaatctgacatgtg 13365422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 282 - 354
Target Start/End: Complemental strand, 38882908 - 38882837
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtg 354  Q
    |||||||||||||| |||||||||| |||| |||| |||||| ||||||||||| |||||| || ||||||||    
T  38882908 atgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacgtagtcacgtg 38882837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 280 - 387
Target Start/End: Original strand, 36168839 - 36168946
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    ||||||||||||||||||||||| ||  |||| | || || || ||||||||||||  ||||| |||| ||| || | || ||||||||| | |||||||    
T  36168839 ttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagcatactttctct 36168938  T
Q  380 ttcctctc 387  Q
    || |||||    
T  36168939 tttctctc 36168946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 342
Target Start/End: Original strand, 2533127 - 2533188
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgaca 342  Q
    |||||||||||||||||||||| |||| |||| | || |||||| ||||||||||| ||||||    
T  2533127 ttatgatacatagacatccttaagtggcaatacatcctttgaca-ccacacaaaaatctgaca 2533188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 282 - 342
Target Start/End: Original strand, 17823789 - 17823849
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgaca 342  Q
    |||||||||| |||||||||||||| |||| |  |||  ||||||||||||||| ||||||    
T  17823789 atgatacatatacatccttaggtggcaatacattcctgaacacccacacaaaaatctgaca 17823849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 1024 - 919
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||||| |||||||| |||| |||| || ||| ||||||||||| |||||| || ||||||||||||| ||||||||||| |||||||||    
T  1024 atgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttctcttt 925  T
Q  382 cctctc 387  Q
    ||||||    
T  924 cctctc 919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 1024 - 919
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||||| |||||||| |||| |||| || ||| ||||||||||| |||||| || ||||||||||||| ||||||||||| |||||||||    
T  1024 atgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttctcttt 925  T
Q  382 cctctc 387  Q
    ||||||    
T  924 cctctc 919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 1e-26; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 5957835 - 5957940
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    ||||||||||||||| ||||||||| |||| |||| |||||||||||||||||| |||||| || |||||||| |||| |||||| |||| |||||||||    
T  5957835 atgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcacactttctcttt 5957934  T
Q  382 cctctc 387  Q
    ||||||    
T  5957935 cctctc 5957940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 37038484 - 37038589
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||||| |||||||| |||| |||| |||||||||||||||||| |||||| || |||||||| |||| ||||||||||| ||||| |||    
T  37038484 atgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctattt 37038583  T
Q  382 cctctc 387  Q
    ||||||    
T  37038584 cctctc 37038589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 34012391 - 34012286
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| |||| ||||||||||||||||||  ||||| || |||||||| |||| ||||||||||| |||||||||    
T  34012391 atgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttctcttt 34012292  T
Q  382 cctctc 387  Q
     |||||    
T  34012291 tctctc 34012286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 280 - 387
Target Start/End: Complemental strand, 10621184 - 10621077
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    ||||||||||||||||||||||||||| |||| |||| |||||||||||||||||| |||||| || | ||| |  |||| ||||||||||| |||||||    
T  10621184 ttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcacactttctct 10621085  T
Q  380 ttcctctc 387  Q
    || |||||    
T  10621084 tttctctc 10621077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 280 - 387
Target Start/End: Complemental strand, 15259026 - 15258919
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||||| |  ||||| ||| |||| | |||| |||| ||||| ||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  15259026 ttatgatacatagatactcttagatggcaatacatccctggacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcacattttctct 15258927  T
Q  380 ttcctctc 387  Q
    ||||||||    
T  15258926 ttcctctc 15258919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 280 - 387
Target Start/End: Complemental strand, 43414678 - 43414571
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    ||||||||||||||||||||||| ||| || | |||| |||||||||||||||||| || ||| |||||||| || |||| ||||||||||| |||||||    
T  43414678 ttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcacactttctct 43414579  T
Q  380 ttcctctc 387  Q
    || |||||    
T  43414578 tttctctc 43414571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 280 - 382
Target Start/End: Original strand, 34307219 - 34307321
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||| ||| |||||||||| |||| ||||||||||||||||||||||| ||||||||||| ||  |||| || ||||||| ||| |||||||    
T  34307219 ttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggacatatgaaccccgcacaagtacactttctct 34307318  T
Q  380 ttc 382  Q
    |||    
T  34307319 ttc 34307321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 1180035 - 1179930
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| |||| |||||||||||||||||| |||||| || |||| ||| || | ||||||||||| |||||||||    
T  1180035 atgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacactttctcttt 1179936  T
Q  382 cctctc 387  Q
     |||||    
T  1179935 tctctc 1179930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 12831052 - 12831157
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||  |||| |||| |||||||||||||||||| |||||| || |||||||| | || ||||||||||| |||||||||    
T  12831052 atgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 12831151  T
Q  382 cctctc 387  Q
     |||||    
T  12831152 tctctc 12831157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 15197338 - 15197443
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    ||||||||||||||  ||||||||| |||| |||| |||||||||||||||||| |||||| || |||||||| | || ||||||||||| |||||||||    
T  15197338 atgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 15197437  T
Q  382 cctctc 387  Q
     |||||    
T  15197438 tctctc 15197443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 14547929 - 14548032
Alignment:
Q  284 gatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctctttcc 383  Q
    |||||||||||| |||||||||| |||| |||  |||||||||||||||||| |||||| || |||||||| | || ||||||||||| ||||||||| |    
T  14547929 gatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttc 14548028  T
Q  384 tctc 387  Q
    ||||    
T  14548029 tctc 14548032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 319 - 386
Target Start/End: Original strand, 38229470 - 38229537
Alignment:
Q  319 tgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctctttcctct 386  Q
    ||||||||||||||||| |||||||||||||||||| || ||| ||||||||||||||||||||||||    
T  38229470 tgacacccacacaaaaatctgacatgtggtcacgtggattctgtacaagcacattttctctttcctct 38229537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 280 - 382
Target Start/End: Original strand, 16383380 - 16383482
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||| ||| |||||||||| |||| ||||||||||||||||||||||| ||||||||||| ||  || | || ||||||| ||| |||||||    
T  16383380 ttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 16383479  T
Q  380 ttc 382  Q
    |||    
T  16383480 ttc 16383482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 504216 - 504111
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| |||  |||||||||||||||||| |||||| || |||||||| | || |||||||||||  ||||||||    
T  504216 atgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacattctcttt 504117  T
Q  382 cctctc 387  Q
     |||||    
T  504116 tctctc 504111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 4854958 - 4854853
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    ||||||||||||||||||||||||| |||| |||| || ||||| ||| ||||| |||| |||||| ||| || | |||||||||||||| |||||||||    
T  4854958 atgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcacactttctcttt 4854859  T
Q  382 cctctc 387  Q
     |||||    
T  4854858 tctctc 4854853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 381
Target Start/End: Complemental strand, 15048278 - 15048178
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    ||||||||||||||||||||||||||| |||| |||| |||||| ||||||||||| |||||| || | ||| || | || ||||||||||| |||||||    
T  15048278 ttatgatacatagacatccttaggtggcaatacaccctttgaca-ccacacaaaaatctgacacgtagccacatggaccccgcacaagcacactttctct 15048180  T
Q  380 tt 381  Q
    ||    
T  15048179 tt 15048178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 23122692 - 23122587
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| ||||| |||| |||| |||  |||||||||||||||||| |||||| || |||||||| | || ||| ||||||| |||||||||    
T  23122692 atgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttctcttt 23122593  T
Q  382 cctctc 387  Q
     |||||    
T  23122592 tctctc 23122587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 40424038 - 40423933
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||| | |||||||||| |||| |||| |||||| ||||||||||| |||||| || |||| ||| | || ||||||||||| |||||||||    
T  40424038 atgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctcttt 40423939  T
Q  382 cctctc 387  Q
     |||||    
T  40423938 tctctc 40423933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 384
Target Start/End: Complemental strand, 10284728 - 10284624
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||||||| ||||| |||  |||| || | ||||||||||||||||||  ||||| || |||||||| | || ||||||||||| |||||||    
T  10284728 ttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacactttctct 10284629  T
Q  380 ttcct 384  Q
    |||||    
T  10284628 ttcct 10284624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 297 - 387
Target Start/End: Complemental strand, 8841512 - 8841422
Alignment:
Q  297 ccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctctttcctctc 387  Q
    |||||||||| | || |||| |||||||||||||||||| || ||| || |||||||| | || ||||||||||| |||||||||||||||    
T  8841512 ccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctctttcctctc 8841422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 321 - 387
Target Start/End: Original strand, 9122229 - 9122295
Alignment:
Q  321 acacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctctttcctctc 387  Q
    ||||||||||||||| ||||||||| |||||||| |||| ||||||||||| ||||||||| |||||    
T  9122229 acacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctcttttctctc 9122295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 280 - 382
Target Start/End: Complemental strand, 16056498 - 16056396
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||| ||||||||| |||  |||| | ||||||||||||||||||||| ||||||||||| ||  || | || ||||||| ||| |||||||    
T  16056498 ttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 16056399  T
Q  380 ttc 382  Q
    |||    
T  16056398 ttc 16056396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 280 - 382
Target Start/End: Complemental strand, 24307890 - 24307788
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||| ||| |||||||||| |||| | ||||||||||||||||||||| |||| |||||| ||  || | || ||||||| ||| |||||||    
T  24307890 ttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaagtacactttctct 24307791  T
Q  380 ttc 382  Q
    |||    
T  24307790 ttc 24307788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 280 - 382
Target Start/End: Original strand, 32032728 - 32032829
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||| ||| |||||||||| |||| | || |||||| ||||||||||| ||||||||||| ||  || |||||||||||| ||| |||||||    
T  32032728 ttatgatacataaacacccttaggtggcaatacatcc-ttgacatccacacaaaaatctgacatgtggccatatggatcctgcacaagtacactttctct 32032826  T
Q  380 ttc 382  Q
    |||    
T  32032827 ttc 32032829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 44507182 - 44507077
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| || | || ||||||||||||||| |||||| || |||||||| | || | ||||||| | |||||||||    
T  44507182 atgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcatactttctcttt 44507083  T
Q  382 cctctc 387  Q
     |||||    
T  44507082 tctctc 44507077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 282 - 386
Target Start/End: Complemental strand, 20075029 - 20074933
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    ||||||||||||||||||||||||| |||| || | |||||||||||| |||||  |||        |||||| | |||||||||||||| |||||||||    
T  20075029 atgatacatagacatccttaggtggcaatacactctttgacacccacataaaaatgtga--------cacgtggaccctgcacaagcacactttctcttt 20074938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 280 - 347
Target Start/End: Original strand, 24307632 - 24307699
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtgg 347  Q
    |||||||||||| ||| |||||||||| |||| | || |||||||||||||||||| |||| ||||||    
T  24307632 ttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctgatatgtgg 24307699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 280 - 347
Target Start/End: Complemental strand, 30479571 - 30479504
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtgg 347  Q
    |||||||||||| ||| |||||||||| |||| |||| |||||| ||||| ||||| |||||||||||    
T  30479571 ttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgacatgtgg 30479504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 354
Target Start/End: Complemental strand, 14055689 - 14055615
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtg 354  Q
    ||||||||||| |||| |||||||||  |||| || |||||||| ||||||||||| || |||||| ||||||||    
T  14055689 ttatgatacattgacacccttaggtgacaatacactccttgacatccacacaaaaatcttacatgtagtcacgtg 14055615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 350
Target Start/End: Original strand, 17443828 - 17443898
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtca 350  Q
    |||||||||||||||| |||||||||  |||| ||  ||| |||| |||||||||| ||||||||| ||||    
T  17443828 ttatgatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtca 17443898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 282 - 342
Target Start/End: Original strand, 42221520 - 42221580
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgaca 342  Q
    |||||||||| |||||||||||||  |||| |  ||| |||||||||||||||| ||||||    
T  42221520 atgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgaca 42221580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 1e-26; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 51898778 - 51898673
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||||| |||||||| |||| |||| |||||||||||||||||| |||||| || |||||||| |||| ||||||||||| ||||| |||    
T  51898778 atgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctattt 51898679  T
Q  382 cctctc 387  Q
    ||||||    
T  51898678 cctctc 51898673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 280 - 387
Target Start/End: Original strand, 32813250 - 32813357
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    ||||||||||||||||||||||||||| |||| |||| || ||||||||||||||| |||||| |||||||| || | || ||||||||||| |||||||    
T  32813250 ttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacactttctct 32813349  T
Q  380 ttcctctc 387  Q
    || |||||    
T  32813350 tttctctc 32813357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 37649203 - 37649308
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||||| |||||||| |||| || | |||||||||||||||||| |||||| |||||||||||||| | ||||||||||| |||| ||||    
T  37649203 atgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcacactttcccttt 37649302  T
Q  382 cctctc 387  Q
     |||||    
T  37649303 tctctc 37649308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 47452415 - 47452310
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| |||| |||||||||||||||||| || ||| || |||||||| |||| ||||||||||| |||||||||    
T  47452415 atgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacactttctcttt 47452316  T
Q  382 cctctc 387  Q
     |||||    
T  47452315 tctctc 47452310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 2581920 - 2582025
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| |||| |||||||||||||||||| |||||| || |||||||| | || ||||||||||| ||||| |||    
T  2581920 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttcttttt 2582019  T
Q  382 cctctc 387  Q
     |||||    
T  2582020 tctctc 2582025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 9474971 - 9474866
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| |||| |||||||||||||||||| |||||| || |||||||| | || |||||| |||| |||||||||    
T  9474971 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacactttctcttt 9474872  T
Q  382 cctctc 387  Q
     |||||    
T  9474871 tctctc 9474866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 27564830 - 27564725
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    ||||||||||||||||||||||||| |||| |||  |||||||||||||||||| |||||| ||  ||||||| | || ||||||||||| |||||||||    
T  27564830 atgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttctcttt 27564731  T
Q  382 cctctc 387  Q
     |||||    
T  27564730 tctctc 27564725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 282 - 395
Target Start/End: Complemental strand, 44548471 - 44548358
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||||| |||||||| |||| |||  |||| ||||||||||||| |||||| || |||||||| | || ||||||||||| |||||||||    
T  44548471 atgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 44548372  T
Q  382 cctctcttcatctc 395  Q
     |||||||| ||||    
T  44548371 tctctcttcttctc 44548358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 280 - 382
Target Start/End: Complemental strand, 50591097 - 50590995
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||| ||| |||||||||| |||| ||||||||||||||||||||||| ||||||||||| ||  || | || ||||||| ||| |||||||    
T  50591097 ttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 50590998  T
Q  380 ttc 382  Q
    |||    
T  50590997 ttc 50590995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 3000324 - 3000429
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||| ||| |||||||||| |||| |||| |||||||||||||||||| |||||| || |||||||| | || | ||||||||| |||||||||    
T  3000324 atgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttt 3000423  T
Q  382 cctctc 387  Q
     |||||    
T  3000424 tctctc 3000429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 8346483 - 8346378
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    ||||||||||| || | |||||||| |||| |||  |||||||||||||||||| |||||| || |||||||| | |||||||||||||| |||||||||    
T  8346483 atgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcacactttctcttt 8346384  T
Q  382 cctctc 387  Q
     |||||    
T  8346383 tctctc 8346378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 280 - 387
Target Start/End: Original strand, 6260873 - 6260980
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||| ||||| |||||||||||| |||| ||||||  ||||||||| ||||| || ||||||||||||||| | || ||| ||||||||||||| |    
T  6260873 ttatgatagatagatatccttaggtggtaatacacccctgaacacccacataaaaatctaacatgtggtcacgtggaccccgcataagcacattttctat 6260972  T
Q  380 ttcctctc 387  Q
    ||| ||||    
T  6260973 ttcttctc 6260980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 280 - 347
Target Start/End: Complemental strand, 41608590 - 41608523
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtgg 347  Q
    |||||||||||| |||||||||||||| |||| |||||||||||| |||||||||| |||||||||||    
T  41608590 ttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtgg 41608523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 280 - 387
Target Start/End: Original strand, 44453982 - 44454089
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||||||| | ||| |||| |||| | | ||||| ||||||||||||| |||||||||||| ||||| ||||  |||||||||| ||| |||    
T  44453982 ttatgatacatagacacctttaagtggcaatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcacactttttct 44454081  T
Q  380 ttcctctc 387  Q
    ||||||||    
T  44454082 ttcctctc 44454089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 382
Target Start/End: Complemental strand, 5959097 - 5958995
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||| ||| ||||| |||| |||| ||| ||||||||||||||||||| ||||||||||||||  || | || ||||||| ||| |||||||    
T  5959097 ttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttctct 5958998  T
Q  380 ttc 382  Q
    |||    
T  5958997 ttc 5958995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 38595159 - 38595264
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||| ||| | |||||||| |||| |||| |||||||||||||||||| |||||| || |||||||| | || | ||||||||| |||||||||    
T  38595159 atgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttt 38595258  T
Q  382 cctctc 387  Q
     |||||    
T  38595259 tctctc 38595264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 272 - 390
Target Start/End: Original strand, 26440728 - 26440847
Alignment:
Q  272 ttaaatga-ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcac 370  Q
    |||||||| ||| |||| |||||||||||||| ||  |||| |||| || ||||||||||||||| |||||| |||| ||| || |||| ||| ||||||    
T  26440728 ttaaatgagttaggatagatagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcac 26440827  T
Q  371 attttctctttcctctcttc 390  Q
    | ||||||||| ||||||||    
T  26440828 actttctcttttctctcttc 26440847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 282 - 381
Target Start/End: Complemental strand, 48716377 - 48716278
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| |||  |||||| ||||||||||| |||||| || |||||||| | || ||||||||||| ||| |||||    
T  48716377 atgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttatcttt 48716278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 377
Target Start/End: Original strand, 48489338 - 48489400
Alignment:
Q  315 cccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttct 377  Q
    |||| |||| ||||||||||| |||||||||||||||||| |||| |||||||||||||||||    
T  48489338 ccctggacatccacacaaaaatctgacatgtggtcacgtggatcccgcacaagcacattttct 48489400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 38632416 - 38632311
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| |||  || ||| ||||||||||| |||||| || |||||||| | || ||||||||||| ||| |||||    
T  38632416 atgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttttcttt 38632317  T
Q  382 cctctc 387  Q
     |||||    
T  38632316 tctctc 38632311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 50630463 - 50630568
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||| | |||||||||| |||| | || |||  ||||||||||||| |||||| || |||||||| | || ||||||||||| |||||||||    
T  50630463 atgatacatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 50630562  T
Q  382 cctctc 387  Q
     |||||    
T  50630563 tctctc 50630568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 280 - 386
Target Start/End: Complemental strand, 45044657 - 45044551
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||| |  ||||||||||| |||| |||  |||||||||| ||||||| ||||||||| | ||| || | || |||||| ||||||||||||    
T  45044657 ttatgatacatacatttccttaggtggcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaacacattttctct 45044558  T
Q  380 ttcctct 386  Q
    || ||||    
T  45044557 tttctct 45044551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 43137 - 43242
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    ||||||||||||||  |||||| |  |||| | || |||||||||||||||||| |||||| || |||||||| |  | ||||||||||| |||||||||    
T  43137 atgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacactttctcttt 43236  T
Q  382 cctctc 387  Q
     |||||    
T  43237 tctctc 43242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 282 - 390
Target Start/End: Original strand, 26274437 - 26274545
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| ||||| |||| |||| | |  |||||| ||||| ||||| ||||||  | |||||||| |||||||||||| ||| ||| |||||    
T  26274437 atgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaagtacactttttcttt 26274536  T
Q  382 cctctcttc 390  Q
     ||||||||    
T  26274537 tctctcttc 26274545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 13414792 - 13414865
Alignment:
Q  308 aatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||| |||| |||||||||||||||||| || ||| || |||||||| | ||  ||||||||||||||||||||    
T  13414792 aatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacattttctcttt 13414865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 23597186 - 23597081
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||||| |||||||| |||| || | |||| ||||||| ||||| |||||| |||| |||||  | | ||||||| |||| ||| |||||    
T  23597186 atgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacgtggccacgttgaccttgcacaaacacactttatcttt 23597087  T
Q  382 cctctc 387  Q
     |||||    
T  23597086 tctctc 23597081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 41758810 - 41758915
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| | |||  ||| |||| |||| |||||| ||||||||||| |||||| || ||||| || | || |||||| |||| |||||||||    
T  41758810 atgatacatagacaccattaaatggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacactttctcttt 41758909  T
Q  382 cctctc 387  Q
     |||||    
T  41758910 tctctc 41758915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 342
Target Start/End: Complemental strand, 3302628 - 3302568
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgaca 342  Q
    |||||||||| |||||||||||||  ||||||  ||| |||||||||||||||| ||||||    
T  3302628 atgatacatatacatccttaggtgacaatatattcctggacacccacacaaaaatctgaca 3302568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 386
Target Start/End: Complemental strand, 37926535 - 37926429
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||||| ||| |||||||| |||| | |  || ||||||||| ||||| |||||| |||| ||| || |||| | ||||| ||| |||||||    
T  37926535 ttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaagtacactttctct 37926436  T
Q  380 ttcctct 386  Q
    || ||||    
T  37926435 tttctct 37926429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 382
Target Start/End: Original strand, 47748446 - 47748547
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||| | | |||||||||| |||| |||| |||||||||| | ||||| ||||||||||| ||  || |||| ||||||| | | |||||||    
T  47748446 ttatgatacataaatacccttaggtggcaatacaccc-ttgacacccatataaaaatctgacatgtggccatatggatcccgcacaagtatactttctct 47748544  T
Q  380 ttc 382  Q
    |||    
T  47748545 ttc 47748547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 342
Target Start/End: Complemental strand, 49811624 - 49811562
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgaca 342  Q
    |||||||| |||||||||||||||||  |||| |||  |||||| ||||||||||| ||||||    
T  49811624 ttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgaca 49811562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 11152472 - 11152368
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||| ||||||||| |||||||||| |||| |||| | |||| ||||||||||| |||||| || |||| ||  | || ||||||||||  ||||| |||    
T  11152472 atgaaacatagaca-ccttaggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcacgctttcttttt 11152374  T
Q  382 cctctc 387  Q
    ||||||    
T  11152373 cctctc 11152368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 2e-25; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 280 - 387
Target Start/End: Original strand, 26754698 - 26754805
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    ||||||| |||||||| |||||||||| |||| |||| | |||| ||||||||||| ||||||||||||||| || | || |||||||||||||||||||    
T  26754698 ttatgattcatagacacccttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctct 26754797  T
Q  380 ttcctctc 387  Q
    ||||||||    
T  26754798 ttcctctc 26754805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 49607419 - 49607524
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| |||| |||||||||||||||||| |||||| || |||||||| ||||  |||||||||| |||||||||    
T  49607419 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactttctcttt 49607518  T
Q  382 cctctc 387  Q
     |||||    
T  49607519 tctctc 49607524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 53982016 - 53982121
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| |||| |||||||||||||||||| |||||| || |||||||| | || ||||||||||| |||||||||    
T  53982016 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 53982115  T
Q  382 cctctc 387  Q
     |||||    
T  53982116 tctctc 53982121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 280 - 387
Target Start/End: Complemental strand, 26141629 - 26141522
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    ||||||||||||||||||||||||||| |||| |||| || ||||||||||||||| |||||| |||||||| || | ||  |||||||||| |||||||    
T  26141629 ttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacactttctct 26141530  T
Q  380 ttcctctc 387  Q
    || |||||    
T  26141529 tttctctc 26141522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 281 - 387
Target Start/End: Original strand, 52629304 - 52629410
Alignment:
Q  281 tatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctctt 380  Q
    ||||||||||||||| |||||||||| |||| |||| |||||||||||||||||| |||||| || |||||||| | || | ||||||||| ||||||||    
T  52629304 tatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctctt 52629403  T
Q  381 tcctctc 387  Q
    | |||||    
T  52629404 ttctctc 52629410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 33644205 - 33644310
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||| ||||| |||| |||| |||||||||||||||||| |||||| || |||||||| | || ||||||||||| |||||||||    
T  33644205 atgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 33644304  T
Q  382 cctctc 387  Q
     |||||    
T  33644305 tctctc 33644310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 282 - 382
Target Start/End: Complemental strand, 14623934 - 14623834
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||| ||||| |||||||||| ||| ||| | |   |||||||||| |||||||||    
T  14623934 atgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacactttctcttt 14623835  T
Q  382 c 382  Q
    |    
T  14623834 c 14623834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 8076398 - 8076503
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||| ||| |||||||||| | || |||| |||||||||||||||||| || ||| || |||||||| | || ||||||||||| |||||||||    
T  8076398 atgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctcttt 8076497  T
Q  382 cctctc 387  Q
    ||||||    
T  8076498 cctctc 8076503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 282 - 390
Target Start/End: Complemental strand, 48587186 - 48587078
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||| | |||||||||| |||| |||| |||||||| ||| ||||| |||||| || |||||||| |||| ||||||| ||| |||||||||    
T  48587186 atgatacatagatacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaagtacactttctcttt 48587087  T
Q  382 cctctcttc 390  Q
     ||||||||    
T  48587086 tctctcttc 48587078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 280 - 387
Target Start/End: Complemental strand, 11348019 - 11347912
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    ||||||||||||||||||||||||||  |||| | || |||||| ||||||||||| |||||| |||| ||| || | |||||| ||||||| |||||||    
T  11348019 ttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcacactttctct 11347920  T
Q  380 ttcctctc 387  Q
    || |||||    
T  11347919 tttctctc 11347912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 280 - 387
Target Start/End: Original strand, 11907374 - 11907481
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||||||| |||||||||  |||| || |||  |||| |||||||||| ||||||||||||||  || | || |||||||||||||||||||    
T  11907374 ttatgatacatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcacattttctct 11907473  T
Q  380 ttcctctc 387  Q
    || |||||    
T  11907474 tttctctc 11907481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 280 - 387
Target Start/End: Complemental strand, 33118948 - 33118841
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||||||| |||||||||  |||| |||| ||||||||||||||||||  ||||| || |||||||| ||||  || || |||| |||||||    
T  33118948 ttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatccctcagaaacacactttctct 33118849  T
Q  380 ttcctctc 387  Q
    ||||||||    
T  33118848 ttcctctc 33118841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 282 - 380
Target Start/End: Complemental strand, 27714986 - 27714888
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctctt 380  Q
    |||||||||||||| | |||||||| |||| |||| |||||||||||||||||| |||||| || |||| ||| | || ||||||||||| ||||||||    
T  27714986 atgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctctt 27714888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 24700049 - 24699944
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    ||||||||||||||||||||| ||| |||| |||  |||||||||||| ||||| ||| || |||| |||||| | |||| |||| |||| |||||||||    
T  24700049 atgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccctgtacaaacacactttctcttt 24699950  T
Q  382 cctctc 387  Q
    ||||||    
T  24699949 cctctc 24699944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 30801828 - 30801723
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||  |||| |||| |||| |||||||||||||  |||||||| ||||  || | ||  ||||||||||||||||||||    
T  30801828 atgatacatagacacccttaggtgataatacaccctttgatacccacacaaaaatatgacatgtagtcatatggaccccacacaagcacattttctcttt 30801729  T
Q  382 cctctc 387  Q
    ||||||    
T  30801728 cctctc 30801723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 31456694 - 31456799
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| || |||| || |||| |||| |||||||||||||||||| |||||| || |||| ||| | || ||||||||||| |||||||||    
T  31456694 atgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctcttt 31456793  T
Q  382 cctctc 387  Q
     |||||    
T  31456794 tctctc 31456799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 54868990 - 54868885
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| |||||||||| |||| |||  |||||||||||||||||| |||||| || || ||||| | || |||||| |||| |||||||||    
T  54868990 atgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttctcttt 54868891  T
Q  382 cctctc 387  Q
     |||||    
T  54868890 tctctc 54868885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 282 - 353
Target Start/End: Complemental strand, 11095448 - 11095377
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgt 353  Q
    |||||||||||||| |||||||||| |||| |||| |||||||||||||||||| |||||| || |||||||    
T  11095448 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgt 11095377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 280 - 387
Target Start/End: Complemental strand, 20765012 - 20764905
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||| |||||||||||||||||||| |||| || | || ||||||||||||||| |||||| |||| ||| || | || | ||||||||| |||||||    
T  20765012 ttatgagacatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcacactttctct 20764913  T
Q  380 ttcctctc 387  Q
    || |||||    
T  20764912 tttctctc 20764905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 280 - 387
Target Start/End: Complemental strand, 48375803 - 48375696
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    ||||||| |||||||| |||||||||  |||| ||||||  | | ||| ||||||| ||||| ||||||||| || | || |||||||||||||||||||    
T  48375803 ttatgattcatagacacccttaggtgacaatacacccctgaaaatccatacaaaaatctgacgtgtggtcacatggaccccgcacaagcacattttctct 48375704  T
Q  380 ttcctctc 387  Q
    ||||||||    
T  48375703 ttcctctc 48375696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 17470410 - 17470515
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| | |||||||| |||| |||  || ||||||||||||||| |||||| || |||||||| | ||  |||||||||| |||||||||    
T  17470410 atgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttctcttt 17470509  T
Q  382 cctctc 387  Q
     |||||    
T  17470510 tctctc 17470515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 282 - 382
Target Start/End: Complemental strand, 13898150 - 13898050
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||| ||| |||||||||||||| |||| ||||||||||||||||| ||||| |||||| ||| ||| ||| | |   |||||||||| |||||||||    
T  13898150 atgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacactttctcttt 13898051  T
Q  382 c 382  Q
    |    
T  13898050 c 13898050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 280 - 387
Target Start/End: Complemental strand, 41189861 - 41189754
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||| |||||||||||||| |||| | |  |||||||||||| |||||  ||||| |||| ||| || | || ||||||||||| |||||||    
T  41189861 ttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacactttctct 41189762  T
Q  380 ttcctctc 387  Q
    || |||||    
T  41189761 tttctctc 41189754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 280 - 387
Target Start/End: Original strand, 47531868 - 47531975
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    ||||||||||||||||||||||| ||| |||| |||  || ||| |||||||| || |||||| |||| ||  |||| || ||||||||||| |||||||    
T  47531868 ttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcacactttctct 47531967  T
Q  380 ttcctctc 387  Q
    || |||||    
T  47531968 tttctctc 47531975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 280 - 387
Target Start/End: Complemental strand, 51419457 - 51419350
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    ||||||||||||||||||||||| ||  |||| | || || ||||||||||||||| |||||| |||| ||| |  | || ||||||||||| |||||||    
T  51419457 ttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcacactttctct 51419358  T
Q  380 ttcctctc 387  Q
    || |||||    
T  51419357 tttctctc 51419350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 41080714 - 41080817
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||||||||||  | ||| | |||| ||||||||||| |||||| |||| ||||||||| ||| | ||  ||||||||||||||||||||    
T  41080714 atgatacatagacatccttagtagcaaa-acaccctttgacacccacgcaaaaatctgatatgtggtcatgtgga-cccacacaagcacattttctcttt 41080811  T
Q  382 cctctc 387  Q
    | ||||    
T  41080812 catctc 41080817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 282 - 382
Target Start/End: Original strand, 35536631 - 35536731
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||||||||| |||| |||| |||  |||||||||||| |||||  ||||| ||||||| ||| | | | |||||||||| || ||||||    
T  35536631 atgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcacacttcctcttt 35536730  T
Q  382 c 382  Q
    |    
T  35536731 c 35536731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 299 - 382
Target Start/End: Complemental strand, 36331407 - 36331324
Alignment:
Q  299 ttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctctttc 382  Q
    |||||||| |||  ||||||||||||||||||||||| ||||||||||| ||  || | || ||||||| ||| ||||||||||    
T  36331407 ttaggtggcaatgcaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttc 36331324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 350
Target Start/End: Original strand, 42823113 - 42823184
Alignment:
Q  279 attatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtca 350  Q
    ||||||||||||| ||| | ||| |||| |||| ||||||||||||||||| |||||  |||||||||||||    
T  42823113 attatgatacataaacaccattatgtggtaatacaccccttgacacccacaaaaaaatttgacatgtggtca 42823184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 387
Target Start/End: Complemental strand, 1758555 - 1758446
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatatacccc--ttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttct 377  Q
    ||||||||||||| || || ||||| | |||| |||||  |||||||||||||||||| ||||||| |||| ||||| |  |  ||||| ||||||||||    
T  1758555 ttatgatacatagtcaaccataggttgcaatacaccccccttgacacccacacaaaaatctgacatatggttacgtggactccacacaaacacattttct 1758456  T
Q  378 ctttcctctc 387  Q
    ||||| ||||    
T  1758455 ctttcatctc 1758446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 25407243 - 25407137
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacac-aaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctctt 380  Q
    |||||||||| ||| || ||||||| ||||||||||||||||| ||||| ||||| |||||| ||| |||  || ||||  ||||| |||| ||||||||    
T  25407243 atgatacatacacaaccataggtggcaatataccccttgacacacacacaaaaaatctgacacgtgatcatatggatcccacacaaacacactttctctt 25407144  T
Q  381 tcctctc 387  Q
    || ||||    
T  25407143 tcatctc 25407137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 346
Target Start/End: Complemental strand, 45058649 - 45058584
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtg 346  Q
    |||||||||||| ||| |||||||||| |||| |||| |||||||||||| ||||| ||||||||||    
T  45058649 ttatgatacataaacacccttaggtggcaatacaccc-ttgacacccacataaaaatctgacatgtg 45058584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 382
Target Start/End: Original strand, 8956767 - 8956867
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||||||||| |||| |||| | || |||||||||||| |||||  ||||| ||| ||| ||| | | | |||||||||| || ||||||    
T  8956767 atgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgacacgtgttcatgtggaccttacacaagcacacttcctcttt 8956866  T
Q  382 c 382  Q
    |    
T  8956867 c 8956867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 35965869 - 35965772
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||| ||||||||| |||  |||| | || |||||||||||| ||||| |||||| ||||        |||||||||||||||| |||||||||    
T  35965869 atgatacatatacatccttaagtgataatacatcctttgacacccacataaaaatctgacacgtgg--------atcctgcacaagcacactttctcttt 35965778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 36331475 - 36331407
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggt 348  Q
    |||||||||||| ||| |||||| ||| |||  ||||||||||| ||||||||||| ||| ||||||||    
T  36331475 ttatgatacataaacacccttagatggcaatgcaccccttgacatccacacaaaaatctggcatgtggt 36331407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 347
Target Start/End: Complemental strand, 25395429 - 25395363
Alignment:
Q  281 tatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtgg 347  Q
    ||||||||||| ||||||||| ||||  ||| | ||||| | ||||||||||||| |||||||||||    
T  25395429 tatgatacataaacatccttatgtggccatacatcccttaatacccacacaaaaatctgacatgtgg 25395363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 359
Target Start/End: Complemental strand, 36707519 - 36707442
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcc 359  Q
    |||||||||||| | |||||||||  |||| |||| |||||| ||||||||||| |||||| || || ||||| ||||    
T  36707519 atgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacacgtagttacgtggatcc 36707442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 315 - 386
Target Start/End: Original strand, 17092 - 17163
Alignment:
Q  315 cccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctctttcctct 386  Q
    |||| |||| ||||||||||| ||||||||||||||| || | || ||||||||||||||||||||||||||    
T  17092 ccctcgacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctctttcctct 17163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 297 - 382
Target Start/End: Original strand, 152518 - 152603
Alignment:
Q  297 ccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctctttc 382  Q
    |||| ||||| |||| ||||||||||||||||||||||| ||||||||||||||  || |||| ||||||  ||| ||||||||||    
T  152518 ccttgggtggcaatacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaaatacactttctctttc 152603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 282 - 386
Target Start/End: Original strand, 4034 - 4138
Alignment:
Q  282 atgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctcttt 381  Q
    |||||||||||||| | |||| ||| |||| |||  || ||||||||||||||| |||||| || || ||||| |||| ||| ||||||| |||||||||    
T  4034 atgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttctcttt 4133  T
Q  382 cctct 386  Q
     ||||    
T  4134 tctct 4138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 280 - 387
Target Start/End: Complemental strand, 10206 - 10099
Alignment:
Q  280 ttatgatacatagacatccttaggtggaaatataccccttgacacccacacaaaaagctgacatgtggtcacgtgaatcctgcacaagcacattttctct 379  Q
    |||||||||||||||| | |||||||| |||| | || |||||| ||||| ||||| |||||| || |||||||| | |  | ||||||||| |||||||    
T  10206 ttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaagcacactttctct 10107  T
Q  380 ttcctctc 387  Q
    || |||||    
T  10106 tttctctc 10099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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