View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18982_high_35 (Length: 382)
Name: NF18982_high_35
Description: NF18982
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18982_high_35 |
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Alignment Details
Target: chr8 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 18 - 371
Target Start/End: Original strand, 37511580 - 37511919
Alignment:
| Q |
18 |
aagcaggggtttacacatgctggattgggatgggtttgatgaaatgctattatcaaactaatcaactcttatcattaattcggttgaatatcaactcata |
117 |
Q |
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| T |
37511580 |
aagcaggggtttatacatgctggattgggatgggtttgatgaaatgctattatcaaactaatcaactcttatcattaattcggttgaatatcaactcata |
37511679 |
T |
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| Q |
118 |
tatagtagcatatcttaagagaaaatgaaaactaaatcaaaccaatataatcatgaattacgtgtggggtggatagggctcatgaaacctcaagaaatat |
217 |
Q |
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| T |
37511680 |
tatagtagcatatcttaagagaaaatgaaaactaaatcaaaccaatataa--------------tggggtggatagggctcatgaaacctcaagaaatat |
37511765 |
T |
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| Q |
218 |
tctaaaaaatataactaaatgaaaacatttctggtgcttaacatttcaaaaaccataaaattcaaagcacaaatttaaggaagaacccctgcattatttc |
317 |
Q |
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| T |
37511766 |
tctaaaaaatataactaaatgaaaacatttctggtgcttaacatttcaaaaaccataaaattcaaagcacaaatttaaggaagaacccctgcattatttc |
37511865 |
T |
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| Q |
318 |
cnnnnnnnnnnnnnnnttatgaaccacatttcttataacgtttccgcatttctt |
371 |
Q |
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| T |
37511866 |
caaaaaaaaaaaaaaattatgaaccacacttcttataacgtttccgcatttctt |
37511919 |
T |
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