View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18982_high_61 (Length: 298)
Name: NF18982_high_61
Description: NF18982
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18982_high_61 |
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Alignment Details
Target: chr4 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 18 - 284
Target Start/End: Complemental strand, 19501242 - 19500978
Alignment:
| Q |
18 |
tgtgaaagataaaaacttgtacctgcattctcccaactgttcgttgagctaacctaaccacactgtgcaaatattaatgccaacatgtcgtgcttctgca |
117 |
Q |
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| T |
19501242 |
tgtgaaagataaaaacttgtacctgcattctcccaactgttcgttgagctaacctaaccacactg--caaatattaatgccaacatgtcgtgcttctgca |
19501145 |
T |
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| Q |
118 |
acactttgttgacttcatcagcatgtatacttttagaggtaatatgaactgtatttcaagagttgaaggaaccacgaaagatgcatattggactaaacac |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19501144 |
acactttgttgacttcatcagcatgtatacttttagaggtaatatgaactgtatttcaagagttgaaggaaccacgaaagatgcatattggactaaacac |
19501045 |
T |
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| Q |
218 |
tattaccgaaaatgtgtccttcccgtctttaacaccaaagttgaatggacttcaatattgacttccc |
284 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19501044 |
tattaccgaaaatgtgtccttcccgtctttaacaccaaagttgaatggacttcaatattgacttccc |
19500978 |
T |
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