View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18982_low_15 (Length: 548)

Name: NF18982_low_15
Description: NF18982
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18982_low_15
NF18982_low_15
[»] chr4 (41 HSPs)
chr4 (16-538)||(24142805-24143329)
chr4 (189-538)||(25354600-25354951)
chr4 (192-538)||(23541091-23541438)
chr4 (189-520)||(19894786-19895118)
chr4 (194-538)||(22554818-22555166)
chr4 (194-538)||(11325109-11325456)
chr4 (191-489)||(46741763-46742062)
chr4 (331-514)||(21478095-21478279)
chr4 (309-510)||(11905060-11905260)
chr4 (314-514)||(9068915-9069116)
chr4 (360-514)||(25116840-25116997)
chr4 (331-514)||(15700299-15700484)
chr4 (374-514)||(23400182-23400323)
chr4 (314-514)||(33745933-33746134)
chr4 (309-517)||(50907816-50908025)
chr4 (330-514)||(10721970-10722154)
chr4 (330-514)||(10935739-10935923)
chr4 (360-504)||(16383907-16384052)
chr4 (331-514)||(33898976-33899161)
chr4 (331-514)||(8163769-8163956)
chr4 (361-514)||(18618104-18618258)
chr4 (331-514)||(10190873-10191058)
chr4 (318-514)||(13399292-13399489)
chr4 (314-512)||(28019274-28019474)
chr4 (360-514)||(10724276-10724430)
chr4 (360-514)||(10938045-10938199)
chr4 (368-514)||(19659463-19659610)
chr4 (374-514)||(19183669-19183809)
chr4 (360-517)||(10198236-10198392)
chr4 (360-512)||(15162478-15162630)
chr4 (360-514)||(32861664-32861819)
chr4 (360-517)||(2679866-2680019)
chr4 (360-515)||(16655326-16655481)
chr4 (333-401)||(13268835-13268904)
chr4 (334-414)||(33737973-33738054)
chr4 (485-530)||(46739231-46739276)
chr4 (315-363)||(11289477-11289525)
chr4 (344-395)||(17871610-17871662)
chr4 (334-395)||(11865221-11865283)
chr4 (480-514)||(15622578-15622612)
chr4 (334-382)||(24608696-24608745)
[»] chr7 (73 HSPs)
chr7 (189-538)||(3290647-3290999)
chr7 (189-547)||(48797574-48797934)
chr7 (189-546)||(7619925-7620283)
chr7 (189-547)||(14984518-14984875)
chr7 (189-547)||(15414129-15414486)
chr7 (189-530)||(14975277-14975619)
chr7 (189-530)||(15404753-15405095)
chr7 (189-513)||(30225926-30226256)
chr7 (335-538)||(42782747-42782951)
chr7 (314-547)||(11628610-11628844)
chr7 (314-514)||(9564227-9564426)
chr7 (314-519)||(11560488-11560693)
chr7 (314-514)||(42636217-42636418)
chr7 (314-514)||(9566876-9567075)
chr7 (331-514)||(13455099-13455283)
chr7 (360-514)||(4458756-4458911)
chr7 (324-514)||(4794574-4794766)
chr7 (360-514)||(16207868-16208023)
chr7 (360-514)||(14926664-14926818)
chr7 (360-514)||(15350130-15350284)
chr7 (360-514)||(29546125-29546279)
chr7 (360-512)||(10279832-10279983)
chr7 (332-500)||(15506256-15506425)
chr7 (331-514)||(20991529-20991713)
chr7 (360-514)||(645150-645305)
chr7 (360-514)||(11521397-11521552)
chr7 (360-514)||(16436791-16436945)
chr7 (378-512)||(11998914-11999049)
chr7 (360-514)||(11588481-11588636)
chr7 (384-514)||(14165206-14165337)
chr7 (332-493)||(15436037-15436199)
chr7 (314-465)||(10658353-10658505)
chr7 (314-514)||(26132903-26133103)
chr7 (360-515)||(9894053-9894208)
chr7 (333-512)||(23174870-23175050)
chr7 (375-514)||(12325845-12325985)
chr7 (334-520)||(2076496-2076680)
chr7 (361-514)||(7586517-7586670)
chr7 (333-517)||(15708161-15708345)
chr7 (333-517)||(24813914-24814099)
chr7 (334-517)||(20588692-20588875)
chr7 (360-515)||(23579940-23580095)
chr7 (334-520)||(2082915-2083099)
chr7 (333-517)||(26195442-26195626)
chr7 (360-515)||(10251457-10251612)
chr7 (387-515)||(20925088-20925216)
chr7 (451-517)||(23296611-23296677)
chr7 (314-511)||(23956847-23957045)
chr7 (374-514)||(24902137-24902276)
chr7 (452-517)||(14687476-14687541)
chr7 (333-517)||(31269041-31269224)
chr7 (360-512)||(10309480-10309631)
chr7 (360-514)||(23082762-23082915)
chr7 (388-514)||(10038715-10038842)
chr7 (360-517)||(7508452-7508608)
chr7 (461-547)||(24049568-24049653)
chr7 (334-517)||(23057196-23057380)
chr7 (334-395)||(10260236-10260298)
chr7 (360-517)||(20596809-20596966)
chr7 (461-514)||(10660981-10661034)
chr7 (461-513)||(11406938-11406990)
chr7 (319-442)||(21260490-21260614)
chr7 (333-395)||(9732842-9732905)
chr7 (458-517)||(19353245-19353304)
chr7 (189-223)||(4548036-4548070)
chr7 (189-223)||(11628477-11628511)
chr7 (189-223)||(24049373-24049407)
chr7 (460-517)||(4547795-4547852)
chr7 (331-396)||(4547852-4547917)
chr7 (191-270)||(11560748-11560829)
chr7 (334-401)||(12505697-12505766)
chr7 (189-222)||(12561144-12561177)
chr7 (362-410)||(6045340-6045387)
[»] chr8 (34 HSPs)
chr8 (189-530)||(37155497-37155841)
chr8 (188-547)||(39080809-39081169)
chr8 (189-538)||(17279730-17280083)
chr8 (189-547)||(17880694-17881056)
chr8 (352-530)||(8726853-8727031)
chr8 (314-547)||(33466116-33466348)
chr8 (360-514)||(24091974-24092128)
chr8 (332-514)||(9996487-9996670)
chr8 (360-514)||(22476247-22476402)
chr8 (360-514)||(33977075-33977229)
chr8 (360-514)||(11221260-11221409)
chr8 (314-514)||(1683948-1684146)
chr8 (314-517)||(23249705-23249909)
chr8 (374-489)||(22874209-22874324)
chr8 (360-514)||(23541398-23541553)
chr8 (360-514)||(13660360-13660513)
chr8 (360-514)||(13719003-13719156)
chr8 (333-515)||(23864454-23864637)
chr8 (387-514)||(22485177-22485305)
chr8 (384-514)||(27925434-27925564)
chr8 (418-514)||(45136190-45136286)
chr8 (314-510)||(25240375-25240573)
chr8 (360-517)||(12814577-12814734)
chr8 (331-514)||(24850420-24850603)
chr8 (331-442)||(33961748-33961860)
chr8 (360-517)||(1562352-1562509)
chr8 (364-514)||(20254863-20255021)
chr8 (335-484)||(24384552-24384702)
chr8 (314-408)||(45133634-45133729)
chr8 (334-517)||(12240228-12240416)
chr8 (334-395)||(24482308-24482370)
chr8 (255-303)||(8726772-8726820)
chr8 (478-511)||(33961876-33961909)
chr8 (332-395)||(32179295-32179359)
[»] chr5 (36 HSPs)
chr5 (189-538)||(26183198-26183549)
chr5 (189-538)||(7897879-7898229)
chr5 (191-538)||(17920748-17921096)
chr5 (194-536)||(20498119-20498464)
chr5 (314-514)||(20845782-20845983)
chr5 (314-514)||(20740925-20741125)
chr5 (360-514)||(26329202-26329356)
chr5 (189-362)||(20286650-20286825)
chr5 (331-514)||(30605679-30605863)
chr5 (314-514)||(22404749-22404951)
chr5 (331-514)||(13338579-13338762)
chr5 (360-514)||(13734961-13735116)
chr5 (314-514)||(22184586-22184786)
chr5 (364-514)||(24189883-24190034)
chr5 (314-460)||(22130877-22131022)
chr5 (360-514)||(26036827-26036981)
chr5 (376-514)||(22246339-22246478)
chr5 (360-514)||(23420549-23420704)
chr5 (360-515)||(23623894-23624049)
chr5 (360-514)||(18221127-18221281)
chr5 (314-512)||(13941987-13942187)
chr5 (360-514)||(20714724-20714879)
chr5 (360-469)||(25105453-25105563)
chr5 (360-469)||(25164546-25164656)
chr5 (384-504)||(22252039-22252160)
chr5 (334-520)||(11204712-11204896)
chr5 (331-517)||(17661396-17661583)
chr5 (333-517)||(9522525-9522708)
chr5 (451-517)||(24117703-24117769)
chr5 (464-517)||(22979867-22979920)
chr5 (334-395)||(15116782-15116844)
chr5 (451-517)||(11756193-11756256)
chr5 (334-401)||(24394622-24394690)
chr5 (478-514)||(9422505-9422541)
chr5 (478-514)||(22130837-22130873)
chr5 (362-410)||(24117614-24117662)
[»] chr3 (49 HSPs)
chr3 (188-547)||(9031336-9031696)
chr3 (189-547)||(9036552-9036911)
chr3 (189-547)||(8748884-8749243)
chr3 (331-514)||(295447-295631)
chr3 (331-514)||(17702393-17702578)
chr3 (314-514)||(18064193-18064394)
chr3 (315-514)||(6580854-6581054)
chr3 (313-509)||(7495921-7496116)
chr3 (324-511)||(7479128-7479314)
chr3 (325-514)||(13913773-13913961)
chr3 (325-514)||(13917825-13918013)
chr3 (360-514)||(28051153-28051307)
chr3 (331-514)||(13790666-13790851)
chr3 (360-514)||(17042741-17042895)
chr3 (314-514)||(18034883-18035084)
chr3 (332-514)||(11656010-11656193)
chr3 (360-514)||(24195541-24195695)
chr3 (331-514)||(20748151-20748334)
chr3 (360-514)||(15635860-15636015)
chr3 (324-514)||(11558311-11558496)
chr3 (324-514)||(11567580-11567765)
chr3 (314-514)||(8224810-8225007)
chr3 (314-514)||(18476901-18477100)
chr3 (360-510)||(18547665-18547816)
chr3 (360-514)||(23954544-23954699)
chr3 (378-512)||(44452515-44452650)
chr3 (314-496)||(12054454-12054635)
chr3 (374-514)||(21718913-21719053)
chr3 (374-492)||(19633917-19634035)
chr3 (360-469)||(13524714-13524823)
chr3 (360-517)||(31649708-31649863)
chr3 (360-541)||(21094662-21094842)
chr3 (323-514)||(15686146-15686337)
chr3 (429-514)||(18483358-18483444)
chr3 (360-514)||(1919230-1919377)
chr3 (360-435)||(19531950-19532025)
chr3 (451-517)||(215330-215396)
chr3 (398-510)||(21253984-21254097)
chr3 (375-514)||(286879-287019)
chr3 (360-518)||(3552198-3552355)
chr3 (454-517)||(14406613-14406676)
chr3 (333-395)||(10082380-10082443)
chr3 (475-514)||(13515583-13515622)
chr3 (333-395)||(10189305-10189368)
chr3 (454-517)||(13100707-13100770)
chr3 (360-409)||(3445098-3445146)
chr3 (345-401)||(20976090-20976147)
chr3 (334-366)||(8531382-8531414)
chr3 (314-409)||(14406722-14406818)
[»] chr1 (30 HSPs)
chr1 (189-530)||(45599301-45599643)
chr1 (188-547)||(40313178-40313538)
chr1 (189-547)||(52436774-52437135)
chr1 (189-512)||(33062221-33062555)
chr1 (354-547)||(17012013-17012207)
chr1 (332-511)||(17038236-17038414)
chr1 (331-514)||(26972386-26972572)
chr1 (331-514)||(4246022-4246207)
chr1 (362-514)||(1973332-1973484)
chr1 (360-514)||(11667850-11668004)
chr1 (314-512)||(23477924-23478123)
chr1 (314-514)||(47941327-47941527)
chr1 (360-514)||(17851360-17851514)
chr1 (314-514)||(12753031-12753232)
chr1 (374-514)||(20841252-20841392)
chr1 (332-514)||(13165385-13165566)
chr1 (360-514)||(14745770-14745924)
chr1 (335-517)||(17379607-17379790)
chr1 (189-273)||(17011924-17012009)
chr1 (335-517)||(17355815-17355998)
chr1 (364-517)||(51472077-51472230)
chr1 (317-514)||(15804099-15804296)
chr1 (313-517)||(18390089-18390294)
chr1 (314-514)||(10340145-10340345)
chr1 (333-395)||(49086698-49086761)
chr1 (451-517)||(8282028-8282094)
chr1 (344-401)||(50057521-50057579)
chr1 (360-403)||(20859641-20859684)
chr1 (334-403)||(8902055-8902125)
chr1 (478-514)||(24986135-24986171)
[»] scaffold0328 (1 HSPs)
scaffold0328 (189-547)||(16927-17288)
[»] chr6 (55 HSPs)
chr6 (189-547)||(16137537-16137896)
chr6 (193-541)||(15038194-15038545)
chr6 (188-536)||(19215797-19216146)
chr6 (188-530)||(20002971-20003324)
chr6 (319-547)||(9384589-9384817)
chr6 (314-530)||(15003134-15003351)
chr6 (314-514)||(16309346-16309545)
chr6 (330-530)||(12444694-12444892)
chr6 (360-514)||(17855211-17855366)
chr6 (360-514)||(20470191-20470345)
chr6 (314-494)||(15007344-15007524)
chr6 (360-514)||(33665810-33665965)
chr6 (360-514)||(25805470-25805624)
chr6 (331-514)||(20558289-20558473)
chr6 (360-514)||(9281696-9281851)
chr6 (360-514)||(13195340-13195495)
chr6 (325-514)||(34657139-34657329)
chr6 (314-514)||(28623499-28623699)
chr6 (332-514)||(24501812-24501995)
chr6 (360-514)||(20989753-20989907)
chr6 (378-514)||(21723396-21723533)
chr6 (331-514)||(23882682-23882866)
chr6 (360-514)||(29254904-29255057)
chr6 (360-514)||(17864413-17864567)
chr6 (314-514)||(26965558-26965760)
chr6 (330-514)||(3567410-3567593)
chr6 (364-485)||(32449271-32449392)
chr6 (331-514)||(15897662-15897846)
chr6 (360-514)||(14258927-14259082)
chr6 (360-510)||(17234608-17234759)
chr6 (360-493)||(12039691-12039824)
chr6 (385-514)||(21706335-21706467)
chr6 (374-514)||(25964725-25964866)
chr6 (374-514)||(25969372-25969513)
chr6 (374-514)||(25973812-25973953)
chr6 (331-514)||(17527872-17528057)
chr6 (323-517)||(21323259-21323453)
chr6 (385-514)||(19171457-19171587)
chr6 (399-514)||(8465660-8465775)
chr6 (374-514)||(11960512-11960654)
chr6 (375-468)||(13870399-13870493)
chr6 (333-395)||(12464156-12464219)
chr6 (458-517)||(18152691-18152750)
chr6 (451-517)||(20764979-20765045)
chr6 (360-517)||(30424952-30425109)
chr6 (189-263)||(15035109-15035184)
chr6 (331-407)||(25782798-25782875)
chr6 (189-263)||(15003414-15003490)
chr6 (391-466)||(19894656-19894732)
chr6 (334-401)||(22885237-22885305)
chr6 (486-530)||(32452131-32452175)
chr6 (334-401)||(3904767-3904834)
chr6 (189-223)||(12445006-12445040)
chr6 (449-514)||(19100006-19100070)
chr6 (189-222)||(32449094-32449127)
[»] chr2 (32 HSPs)
chr2 (314-538)||(29565983-29566206)
chr2 (331-536)||(18765663-18765869)
chr2 (314-536)||(13314932-13315155)
chr2 (367-514)||(26860284-26860432)
chr2 (331-514)||(24790146-24790331)
chr2 (314-514)||(19466511-19466712)
chr2 (331-514)||(23758612-23758797)
chr2 (331-514)||(36398782-36398967)
chr2 (361-514)||(12910507-12910661)
chr2 (385-514)||(22610934-22611064)
chr2 (314-514)||(21530355-21530555)
chr2 (360-516)||(27111097-27111252)
chr2 (360-512)||(20649547-20649699)
chr2 (335-517)||(31587467-31587649)
chr2 (334-447)||(15328299-15328412)
chr2 (333-517)||(24317174-24317361)
chr2 (367-517)||(24317795-24317945)
chr2 (389-515)||(27107556-27107682)
chr2 (360-517)||(19198264-19198420)
chr2 (377-515)||(20475263-20475401)
chr2 (364-517)||(20476562-20476715)
chr2 (360-517)||(25347210-25347367)
chr2 (334-517)||(12952462-12952646)
chr2 (334-517)||(24283514-24283698)
chr2 (360-514)||(21250186-21250339)
chr2 (334-401)||(31067586-31067654)
chr2 (189-222)||(13315256-13315289)
chr2 (189-222)||(18765511-18765544)
chr2 (334-395)||(17363507-17363569)
chr2 (346-395)||(20378332-20378382)
chr2 (334-401)||(8163074-8163142)
chr2 (189-288)||(29565850-29565950)
[»] scaffold0143 (1 HSPs)
scaffold0143 (314-547)||(36268-36500)
[»] scaffold0032 (1 HSPs)
scaffold0032 (331-530)||(103093-103292)
[»] scaffold0064 (2 HSPs)
scaffold0064 (315-514)||(52915-53112)
scaffold0064 (439-510)||(45858-45929)
[»] scaffold0022 (2 HSPs)
scaffold0022 (332-530)||(3111-3307)
scaffold0022 (189-222)||(890-923)
[»] scaffold0338 (1 HSPs)
scaffold0338 (331-514)||(16201-16385)
[»] scaffold0102 (1 HSPs)
scaffold0102 (331-514)||(36992-37177)
[»] scaffold0103 (1 HSPs)
scaffold0103 (360-514)||(25661-25816)
[»] scaffold0037 (1 HSPs)
scaffold0037 (364-514)||(110244-110395)
[»] scaffold0008 (1 HSPs)
scaffold0008 (360-514)||(40351-40506)
[»] scaffold0259 (1 HSPs)
scaffold0259 (360-514)||(17266-17420)
[»] scaffold0003 (1 HSPs)
scaffold0003 (360-514)||(26421-26575)
[»] scaffold0059 (3 HSPs)
scaffold0059 (364-514)||(61461-61612)
scaffold0059 (309-463)||(50130-50286)
scaffold0059 (478-514)||(48332-48368)
[»] scaffold0226 (3 HSPs)
scaffold0226 (364-514)||(7528-7678)
scaffold0226 (360-514)||(18115-18269)
scaffold0226 (360-514)||(27509-27663)
[»] scaffold0006 (1 HSPs)
scaffold0006 (385-514)||(87777-87907)
[»] scaffold0088 (1 HSPs)
scaffold0088 (360-514)||(36609-36764)
[»] scaffold0185 (1 HSPs)
scaffold0185 (360-509)||(2351-2501)
[»] scaffold0190 (1 HSPs)
scaffold0190 (331-514)||(16612-16797)
[»] scaffold0035 (1 HSPs)
scaffold0035 (374-512)||(37396-37536)
[»] scaffold0505 (1 HSPs)
scaffold0505 (335-517)||(10021-10204)
[»] scaffold0015 (1 HSPs)
scaffold0015 (364-541)||(202416-202592)
[»] scaffold0333 (1 HSPs)
scaffold0333 (360-456)||(5663-5759)
[»] scaffold0520 (1 HSPs)
scaffold0520 (314-518)||(5388-5593)
[»] scaffold0480 (1 HSPs)
scaffold0480 (451-517)||(11296-11362)
[»] scaffold0423 (1 HSPs)
scaffold0423 (461-517)||(13725-13781)
[»] scaffold0072 (1 HSPs)
scaffold0072 (334-401)||(18540-18607)
[»] scaffold0062 (1 HSPs)
scaffold0062 (334-396)||(2184-2247)
[»] scaffold0020 (1 HSPs)
scaffold0020 (459-514)||(12498-12553)


Alignment Details
Target: chr4 (Bit Score: 445; Significance: 0; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 445; E-Value: 0
Query Start/End: Original strand, 16 - 538
Target Start/End: Original strand, 24142805 - 24143329
Alignment:
Q  16 gaagcaacacggactcaaaaagaactcactggattaagtgggaaaaactgtgtaaagcaaaaaagaatggaggattgggttttagaaatctcagagcctt 115  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24142805 gaagcaacactgactcaaaaagaactcactggattaagtgggaaaaactgtgcaaagcaaaaaagaatggaggattgggttttagaaatctcagagcctt 24142904  T
Q  116 caatatagctttattagccaaacagatatggcacattcagactcaaaatcagtcccttatggctaaagtgctctgaaattctggcacgttagacttaaga 215  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24142905 caatatagctttattagccaaacagatatggcgcattcagactcaaaatcagtcccttatggctaaagtgctctgaaattctggcacgttagacttaaga 24143004  T
Q  216 tgttctataagat-tttcaacacaagttatacagaaacagatgttgaatgaaatgtttcgaacactaagctaacaaaagacaagtaaaacacaaa-cata 313  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24143005 tgttatataagatgtttcaacacaagttatacagaaacagatgttgaatgaaatgtttcgaacactaagctaacaaaagacaagtaaaacacaaagcata 24143104  T
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgta 413  Q
    ||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  24143105 aaagtaaatggcacagagagtttgttaacctagttcggtgcaacgtcacctactctgggggctaccaagtcaggaaggaaatccactagtgtagtccgta 24143204  T
Q  414 atcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcac 513  Q
     |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||    
T  24143205 ttcaatagctctcagcaaaatcctcgtttgcactaatgacctaggacctacccgtactgactttaacctatgaactcctagatctgagatcccatctcac 24143304  T
Q  514 ttccttacaactgatcatagcccct 538  Q
    | ||||||||||||||| |||||||    
T  24143305 tcccttacaactgatcacagcccct 24143329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 189 - 538
Target Start/End: Complemental strand, 25354951 - 25354600
Alignment:
Q  189 tgaaattctggcacgttagacttaagatgttctataagat-tttcaacacaagttatacagaaacagatgttgaatgaaatgtttcgaacactaagctaa 287  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||    
T  25354951 tgaaattctggcacgttagacttaagatgttctataagatgtttcaacacaagttatacagaaacaaatgttgaaagaaatgttttgaacactaagctaa 25354852  T
Q  288 caaaagacaagtaaaacacaaa-cataaaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcag 386  Q
    |||||||||||||||||||||| |||||||||||||| ||||  |||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||    
T  25354851 caaaagacaagtaaaacacaaagcataaaagtaaatgacacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccag 25354752  T
Q  387 gaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctagga 486  Q
    |||||||||| ||||||||||| |||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||    
T  25354751 gaaggaaatccactagtgtagttcgtattcaatatctctcagcaaactccttgtttgcactaatgacctaggacctacccgtactgacttcaacctagga 25354652  T
Q  487 actcctagatctgagatctcatctcacttccttacaactgatcatagcccct 538  Q
    |||||||||| ||||||| ||||||||| ||||||||||||||| |||||||    
T  25354651 actcctagatttgagatcacatctcactcccttacaactgatcacagcccct 25354600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 192 - 538
Target Start/End: Original strand, 23541091 - 23541438
Alignment:
Q  192 aattctggcacgttagacttaagatgttctataagat-tttcaacacaagttatacagaaacagatgttgaatgaaatgtttcgaacactaagctaacaa 290  Q
    ||||||| ||||||||||||| ||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||     
T  23541091 aattctgacacgttagacttacgatgttctatacgacgtttcaacacaagttatacagaaacagatgttgaataaaatgttttgaacactaagctaacac 23541190  T
Q  291 aagacaagtaaaacacaaa-cataaaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaa 389  Q
    || ||||| ||||  |||| |||||| ||||||||||||  |||||||||||| ||||||||||||||||||||||||||||  ||||||||| ||||||    
T  23541191 aacacaagaaaaatgcaaagcataaa-gtaaatggcacagtgagtttgttaacccagttcggtgcaacgtcacctactctggaggctaccaagccaggaa 23541289  T
Q  390 ggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaact 489  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||  |||||     
T  23541290 ggaaatccactagtgtagtccgtattcaatagctctcagcaaactcctcgtttgcactaaagacctaggacctacccgtactgacttcaacccgggaaca 23541389  T
Q  490 cctagatctgagatctcatctcacttccttacaactgatcatagcccct 538  Q
     |||||||||||||||||||||||| |||||||||||||||||||||||    
T  23541390 actagatctgagatctcatctcactcccttacaactgatcatagcccct 23541438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 189 - 520
Target Start/End: Complemental strand, 19895118 - 19894786
Alignment:
Q  189 tgaaattctggcacgttagacttaagatgttctataagat-tttcaacacaagttatacagaaacagatgttgaatgaaatgtttcgaacactaagctaa 287  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19895118 tgaaattctggcacgttagacttacgatgttctatacgatgtttcaacacaagttatacagaaacagatgttgaataaaatgtttcgaacactaagctaa 19895019  T
Q  288 caaaagacaagtaaaacacaaa-cataaaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcag 386  Q
    || |||||||| ||||   ||| ||| |||||||| ||||||  ||||||||||||  |||||||||||||||||| |||||| |||||||||||| |||    
T  19895018 cacaagacaagaaaaatgtaaagcat-aaagtaaaaggcacagtgagtttgttaacctagttcggtgcaacgtcacatactctaggagctaccaagccag 19894920  T
Q  387 gaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctagga 486  Q
    ||| |||||| ||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||| |    
T  19894919 gaacgaaatccactagtgtagttcgtattcaatagctctcagcaaactcctcgtttgaactaatgacctaggacctacccgtactgacttcaacctagaa 19894820  T
Q  487 actcctagatctgagatctcatctcacttcctta 520  Q
    ||||||| |||||||||| ||||||||| |||||    
T  19894819 actcctaaatctgagatcccatctcactccctta 19894786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 194 - 538
Target Start/End: Original strand, 22554818 - 22555166
Alignment:
Q  194 ttctggcacgttagacttaagatgttctataagat-tttcaacacaagttatacagaaacagatgttgaatgaaatgtttcgaacactaagctaacaaaa 292  Q
    ||||||||||||||||||||||||||||| | ||| |||||||||| ||||| || ||||||||||||||||||||||||| |||||||||||||||||     
T  22554818 ttctggcacgttagacttaagatgttctagacgatgtttcaacacaggttattcacaaacagatgttgaatgaaatgtttcaaacactaagctaacaaa- 22554916  T
Q  293 gacaagtaaaacacaaac-ataaaagtaaatgg-cacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaag 390  Q
    |||||||||||| ||||  |||||||||||  | ||||  |||||||||||| |||||||||||||||||||||||||||   ||||||||| |||||||    
T  22554917 gacaagtaaaacgcaaatgataaaagtaaaaagacacagtgagtttgttaacccagttcggtgcaacgtcacctactctgaaggctaccaagccaggaag 22555016  T
Q  391 gaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-at-gacctaggacctacccgtactgaatttaacctaggaac 488  Q
    |||||| ||||||||||||| || |||||||||||||||||||||||||| ||||||| || ||||||||||||| ||||||||| || |||||||||||    
T  22555017 gaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtatgcactatatggacctaggacctatccgtactgacttcaacctaggaac 22555116  T
Q  489 tcctagatctgagatctcatctcacttccttacaactgatcatagcccct 538  Q
    || ||||||||||||| ||||||||| |||| ||||||||||||||||||    
T  22555117 tcgtagatctgagatcccatctcactcccttgcaactgatcatagcccct 22555166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 194 - 538
Target Start/End: Complemental strand, 11325456 - 11325109
Alignment:
Q  194 ttctggcacgttagacttaagatgttctataagat-tttcaacacaagttatacagaaacagatgttgaatgaaatgtttcgaacactaagctaacaaaa 292  Q
    |||||||||||||||||||||||||||| || ||| |||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||     
T  11325456 ttctggcacgttagacttaagatgttctgtatgatgtttcaacacaggttattcacaaacagatgttgaatgaaatgtttcgaacactaagctaacaaa- 11325358  T
Q  293 gacaagtaaaacacaaa-cataaaagtaaatgg-cacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaag 390  Q
    |||||||||||| |||| |||||| |||||  | ||||  ||| |||||||| |  ||| |||||||||||||| ||||||  ||||||||| |||||||    
T  11325357 gacaagtaaaacgcaaagcataaatgtaaaaagacacagtgagattgttaacccgattccgtgcaacgtcacctgctctggaggctaccaagccaggaag 11325258  T
Q  391 gaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaacctaggaact 489  Q
    |||||| ||||||||||||| || ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| | || ||||||||||||    
T  11325257 gaaatccactagtgtagtccttattcaatagctctcaacaaactcctcgtttgcactatatgacctaggacctacccgtactaacttcaacctaggaact 11325158  T
Q  490 cctagatctgagatctcatctcacttccttacaactgatcatagcccct 538  Q
    | ||||||| ||||  ||||||||| ||||||||||||||| |||||||    
T  11325157 cgtagatctaagattccatctcactcccttacaactgatcacagcccct 11325109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 191 - 489
Target Start/End: Complemental strand, 46742062 - 46741763
Alignment:
Q  191 aaattctggcacgttagacttaagatgttctataagat-tttcaacacaagttatacagaaacagatgttgaatgaaatgtttcgaacactaagctaaca 289  Q
    ||||| ||||||||||||||||||||||||| |  ||| |||||||||| |||||||| ||  ||||||||| |||||||||||||||||||||||||||    
T  46742062 aaattatggcacgttagacttaagatgttctttgcgatgtttcaacacaggttatacaaaataagatgttgagtgaaatgtttcgaacactaagctaaca 46741963  T
Q  290 aaagacaagtaaaacacaaa-cataaaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcagga 388  Q
    || |||||| ||||  |||| |||||||||||| ||||||  |||||||||||| || |||||||||||||||||||||||||| ||||||||| || ||    
T  46741962 aa-gacaagaaaaatgcaaagcataaaagtaaaaggcacaatgagtttgttaacccatttcggtgcaacgtcacctactctgggggctaccaagccatga 46741864  T
Q  389 aggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaac 488  Q
    |||||||| ||||||||| ||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| || |||||||||||    
T  46741863 aggaaatccactagtgtaatccttattcaatagctctcagcaaactcctcgtttgcacttatgacctaggacctacccgtattgacttcaacctaggaac 46741764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 331 - 514
Target Start/End: Original strand, 21478095 - 21478279
Alignment:
Q  331 gagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagca 430  Q
    |||||||||||| ||||||||||||||||||||||||||||  ||||||||| ||||||||||||  ||||||||||||| || |||| |||||||||||    
T  21478095 gagtttgttaacccagttcggtgcaacgtcacctactctggaggctaccaagccaggaaggaaatacactagtgtagtccttattcaaaagctctcagca 21478194  T
Q  431 aactcctcgtttgcac-taatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||||| ||| | ||||||||||||||||||||   || || ||||||||||||||||||||||||||| |||||||||    
T  21478195 aactcctcgtttacactttatgacctaggacctacccgtctagacttcaacctaggaactcctagatctgagatcccatctcact 21478279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 309 - 510
Target Start/End: Original strand, 11905060 - 11905260
Alignment:
Q  309 acataaaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagt 408  Q
    |||| ||||||||||  |||  |||||||||||| |||||||||||||||||||||||| |||| | ||||||||||||||||||||| ||||||| |||    
T  11905060 acatgaaagtaaatgatacagtgagtttgttaacccagttcggtgcaacgtcacctactttggg-gttaccaagtcaggaaggaaatccactagtgcagt 11905158  T
Q  409 ccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcat 508  Q
    || || |||||||||||||| ||||| ||||||| |||||| |||||| ||| |||| ||| ||| || ||||||||||||||||||||| ||||| |||    
T  11905159 ccttattcaatagctctcagtaaacttctcgtttacactaaagacctatgacttacctgtattgacttcaacctaggaactcctagatcttagatcccat 11905258  T
Q  509 ct 510  Q
    ||    
T  11905259 ct 11905260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 314 - 514
Target Start/End: Original strand, 9068915 - 9069116
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgt 412  Q
    |||||||| || ||||  ||||||||||| |||||||||  |||   ||||||||||||  |||||||||  |||||||||||| ||||||||||||| |    
T  9068915 aaagtaaaaggaacatcaagtttgttaacccagttcggtaacaaacacacctactctggaggctaccaagcgaggaaggaaatccactagtgtagtcctt 9069014  T
Q  413 aatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctca 512  Q
    | || || |||||||||||||||||||||| |||||| || |||||||||||||||| ||| || || ||||||||||||||||||||||||||||||||    
T  9069015 attctattgctctcagcaaactcctcgtttacactaaagatctaggacctacccgtattgatttcaatctaggaactcctagatctgagatctcatctca 9069114  T
Q  513 ct 514  Q
    ||    
T  9069115 ct 9069116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 360 - 514
Target Start/End: Original strand, 25116840 - 25116997
Alignment:
Q  360 cacctactctgggagctac--caagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgaccta 456  Q
    ||||||||||||| |||||  |||| ||||||||||||| ||||||||||||| || |||||||||||||||||||| ||||||| ||||| ||||||||    
T  25116840 cacctactctgggggctacaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaacttctcgtttacactatatgaccta 25116939  T
Q  457 ggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||||||  || || ||||||||||||||||||||||||||| |||||||||    
T  25116940 ggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcact 25116997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 331 - 514
Target Start/End: Complemental strand, 15700484 - 15700299
Alignment:
Q  331 gagtttgttaactcagttcggtg-caacgtcacctactct-gggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcag 428  Q
    ||||||||| || |||||||||| |||   |||||||||| ||| ||||||||| ||||||||||||| ||||||||||||| || || |||||| ||||    
T  15700484 gagtttgttgacccagttcggtgacaaacacacctactcttgggggctaccaagccaggaaggaaatccactagtgtagtccttattctatagctttcag 15700385  T
Q  429 caaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||||||| |||||| |||||||||||||||| || ||| || ||||||||||||||||||||| ||||| |||||||||    
T  15700384 caaactcctcgtttacactaaagacctaggacctacccatattgatttcaacctaggaactcctagatctcagatcccatctcact 15700299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 374 - 514
Target Start/End: Complemental strand, 23400323 - 23400182
Alignment:
Q  374 gctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactg 472  Q
    ||||||||| ||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||  |    
T  23400323 gctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatag 23400224  T
Q  473 aatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    | || ||||||||||||||||||||||| ||| |||||||||    
T  23400223 acttcaacctaggaactcctagatctgatatcccatctcact 23400182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 314 - 514
Target Start/End: Original strand, 33745933 - 33746134
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgt 412  Q
    |||||||| ||||||   ||||||||||| |||||||||| |||   |||||||| |||  |||||||||  |||||||||||| ||||||||||||| |    
T  33745933 aaagtaaaaggcacaacaagtttgttaacacagttcggtgacaaaaacacctactatggaggctaccaagctaggaaggaaatccactagtgtagtcctt 33746032  T
Q  413 aatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctca 512  Q
    | |  ||||||||||| ||| ||||||||| |||||| ||||||||||||||||||| | | || |||||||||||| ||||||||||||||||||||||    
T  33746033 attttatagctctcagtaaattcctcgtttacactaaagacctaggacctacccgtattaatttcaacctaggaacttctagatctgagatctcatctca 33746132  T
Q  513 ct 514  Q
    ||    
T  33746133 ct 33746134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 309 - 517
Target Start/End: Original strand, 50907816 - 50908025
Alignment:
Q  309 acataaaagtaaatggcacatagagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtag 407  Q
    ||||||||||||| ||||||||  ||||||||||||||||||||| |||   ||||||||||| | ||||||||||||||||| ||||| ||||||||||    
T  50907816 acataaaagtaaaaggcacatatggtttgttaactcagttcggtgacaaacacacctactctgagggctaccaagtcaggaagaaaatccactagtgtag 50907915  T
Q  408 tccgtaatcaatagctctcagcaaactcctcgtttgca-ctaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctc 506  Q
    ||| || || | || | |||||||||||||||||| || ||   ||||||||||||||||||| ||| || |||||||||||||||| |||||||||  |    
T  50907916 tccttattcta-agttatcagcaaactcctcgtttacaactctagacctaggacctacccgtattgacttcaacctaggaactcctaaatctgagattcc 50908014  T
Q  507 atctcacttcc 517  Q
    || ||||||||    
T  50908015 atttcacttcc 50908025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 330 - 514
Target Start/End: Original strand, 10721970 - 10722154
Alignment:
Q  330 agagtttgttaactcagttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcag 428  Q
    ||||||| ||||| ||||||||  |||| |||||||| ||| || | ||||||  ||||||||||||| ||||||||||||| || || | ||||||||     
T  10721970 agagtttattaacccagttcggcacaac-tcacctacatctaggggttaccaatccaggaaggaaatctactagtgtagtccttattctaaagctctcaa 10722068  T
Q  429 caaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||||||| |||| | |||||||||||||||||||  || || |||||||||||||||||||||||||||||||||||||    
T  10722069 caaactcctcgtttacacttaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatctcatctcact 10722154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 330 - 514
Target Start/End: Original strand, 10935739 - 10935923
Alignment:
Q  330 agagtttgttaactcagttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcag 428  Q
    ||||||| ||||| ||||||||  |||| |||||||| ||| || | ||||||  ||||||||||||| ||||||||||||| || || | ||||||||     
T  10935739 agagtttattaacccagttcggcacaac-tcacctacatctaggggttaccaatccaggaaggaaatctactagtgtagtccttattctaaagctctcaa 10935837  T
Q  429 caaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||||||| |||| | |||||||||||||||||||  || || |||||||||||||||||||||||||||||||||||||    
T  10935838 caaactcctcgtttacacttaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatctcatctcact 10935923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 360 - 504
Target Start/End: Original strand, 16383907 - 16384052
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctagg 458  Q
    ||||||||||||| ||| ||||| ||||||||||||| ||||||||||||| || ||||||||||||| |||||||||||||| ||||| ||||||||||    
T  16383907 cacctactctgggggcttccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcaacaaactcctcgtttacactatatgacctagg 16384006  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatc 504  Q
    ||||||||||| | | || |||||| |||||||||||||| |||||    
T  16384007 acctacccgtattaacttcaacctatgaactcctagatctaagatc 16384052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 331 - 514
Target Start/End: Complemental strand, 33899161 - 33898976
Alignment:
Q  331 gagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagc 429  Q
    ||||||||| || |||||||||| |||   |||||||||| || ||||||||||||||||| ||||| ||| |||||||||  | ||||||||||| |||    
T  33899161 gagtttgttgacccagttcggtgacaaacacacctactctaggggctaccaagtcaggaagaaaatccactggtgtagtcctcattcaatagctcttagc 33899062  T
Q  430 aaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||| ||||||| ||||| |||||||||||||||||||||  || || ||||||||||||||||| | |||||||||||||||||    
T  33899061 aaacttctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctaggtttgagatctcatctcact 33898976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 331 - 514
Target Start/End: Original strand, 8163769 - 8163956
Alignment:
Q  331 gagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtca-----ggaaggaaatcaactagtgtagtccgtaatcaatagctct 425  Q
    |||||||||||| |||||||||||||||||||||||||| || ||||||||| ||     ||||||||||  ||||||| ||||| || |||| |||||     
T  8163769 gagtttgttaacccagttcggtgcaacgtcacctactctagg-gctaccaagccaagccaggaaggaaattcactagtgcagtccttattcaaaagctcc 8163867  T
Q  426 cagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||||||||| |  | ||||||||||||||||||||   || || ||||||||||||||||||||||||||| |||||||||    
T  8163868 cagcaaactcctcgtttacctttatgacctaggacctacccgtctagacttcaacctaggaactcctagatctgagatcccatctcact 8163956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 361 - 514
Target Start/End: Complemental strand, 18618258 - 18618104
Alignment:
Q  361 acctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctagga 459  Q
    |||||||||||| ||||||||| ||||||||||||| ||||||||||||| || |||||| |||||| |||||||||||||| ||||| |||||||||||    
T  18618258 acctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatatctctcaacaaactcctcgtttacactatatgacctagga 18618159  T
Q  460 cctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    | |||||||   || || |||||||| ||| |||||||||||||| |||||||||    
T  18618158 catacccgtctagacttcaacctagggactactagatctgagatcccatctcact 18618104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 331 - 514
Target Start/End: Original strand, 10190873 - 10191058
Alignment:
Q  331 gagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagc 429  Q
    ||||||||| || |||||||||| |||   ||||||||||||| ||||||||| ||||||||||||| || |||||||||| || ||||||||||| |||    
T  10190873 gagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccaccagtgtagtccttattcaatagctctaagc 10190972  T
Q  430 aaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||||| ||||| ||||| |||||| ||| ||||  || || ||||||| ||||||||||||||||||  |||||||||    
T  10190973 aaactcctcgtttacactatatgacataggacttactcgtatagacttcaacctagaaactcctagatctgagattccatctcact 10191058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 318 - 514
Target Start/End: Complemental strand, 13399489 - 13399292
Alignment:
Q  318 taaatggcacatagagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatc 416  Q
    ||||||| |||  ||||||||| || |||||||||| |||   |||||||||| || ||||||||| ||||||| ||||| ||||||||||||| || ||    
T  13399489 taaatggtacagtgagtttgttgacccagttcggtgacaaacacacctactctaggggctaccaagccaggaagaaaatccactagtgtagtccttattc 13399390  T
Q  417 aatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
     | ||||||||||||||||||||||| |||| | ||| ||||||||||||||   || || ||||||||||||||||||||||||||  |||||||||    
T  13399389 taaagctctcagcaaactcctcgtttacacttaagacttaggacctacccgtctagatttcaacctaggaactcctagatctgagattccatctcact 13399292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 314 - 512
Target Start/End: Original strand, 28019274 - 28019474
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgt 412  Q
    |||||||||  ||||  ||||||||| || |||||||||| |||   ||| | ||||||| ||||||||| || |||||||||| ||||||||||||| |    
T  28019274 aaagtaaataacacaatgagtttgttgacccagttcggtgacaaacacacatgctctgggggctaccaagccaagaaggaaatccactagtgtagtcctt 28019373  T
Q  413 aatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctc 511  Q
    | |||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||  || || |||||||||||||||| || || |||| ||||||    
T  28019374 attcaatagctctcagcaaactcctcgtttacactatatgacctaggacatacccgtatagacttcaacctaggaactcctatatttgtgatcccatctc 28019473  T
Q  512 a 512  Q
    |    
T  28019474 a 28019474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 360 - 514
Target Start/End: Original strand, 10724276 - 10724430
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctagga 459  Q
    |||||||| |||| ||||| ||| ||||||||||||  ||||||||||||| || || ||||||||||||||||||||| ||| || ||| ||||||  |    
T  10724276 cacctactttgggggctacaaagccaggaaggaaattcactagtgtagtccttattctatagctctcagcaaactcctcatttacattaaagacctaaaa 10724375  T
Q  460 cctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||  || || ||||||||||||||||||||||||||| |||||||||    
T  10724376 cctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcact 10724430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 360 - 514
Target Start/End: Original strand, 10938045 - 10938199
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctagga 459  Q
    |||||||| |||| ||||| ||| ||||||||||||  ||||||||||||| || || ||||||||||||||||||||| ||| || ||| ||||||  |    
T  10938045 cacctactttgggggctacaaagccaggaaggaaattcactagtgtagtccttattctatagctctcagcaaactcctcatttacattaaagacctaaaa 10938144  T
Q  460 cctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||  || || ||||||||||||||||||||||||||| |||||||||    
T  10938145 cctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcact 10938199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 368 - 514
Target Start/End: Original strand, 19659463 - 19659610
Alignment:
Q  368 ctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcac-taatgacctaggacctaccc 466  Q
    ||||| || |||||| ||||||||||||| ||||||||||||| || |||| ||||||||||||||||||||||| ||| | ||||||||||||||||      
T  19659463 ctgggggccaccaagccaggaaggaaatccactagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaggacctacat 19659562  T
Q  467 gtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||   || || ||||||||||||||||||||||||||| |||||||||    
T  19659563 gtttagacttcaacctaggaactcctagatctgagatcccatctcact 19659610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 374 - 514
Target Start/End: Complemental strand, 19183809 - 19183669
Alignment:
Q  374 gctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactga 473  Q
    ||||||||| ||||||||||||| ||||||||| || ||| || |||||||||| |||||| || |||| |||||| ||||||||||| | ||||   ||    
T  19183809 gctaccaagccaggaaggaaatccactagtgtattctgtattctatagctctcaacaaacttcttgtttacactaaagacctaggacccatccgtctaga 19183710  T
Q  474 atttaacctaggaactcctagatctgagatctcatctcact 514  Q
     || ||||||||||||||||||||||||||| |||||||||    
T  19183709 tttcaacctaggaactcctagatctgagatcccatctcact 19183669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 360 - 517
Target Start/End: Complemental strand, 10198392 - 10198236
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgca-ctaatgacctagg 458  Q
    |||||||||| || ||||||||| ||||||||||||| || |||||||||| || || | || ||||||||||||||  |||| || ||   ||||||||    
T  10198392 cacctactctagg-gctaccaagccaggaaggaaatccaccagtgtagtccttattcta-agttctcagcaaactccaagtttacaactctagacctagg 10198295  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    ||||||||||  ||| || ||||||||||||||||||||||||||||||||||||||||    
T  10198294 acctacccgtcttgacttcaacctaggaactcctagatctgagatctcatctcacttcc 10198236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 360 - 512
Target Start/End: Complemental strand, 15162630 - 15162478
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctagga 459  Q
    ||||||||||||| ||| ||||  || |||||||||| ||||||||||||| || || ||| |||||| ||||||| |||||| |||||| |||| || |    
T  15162630 cacctactctgggggctgccaacccaagaaggaaatccactagtgtagtccttattctataactctcaacaaactcttcgtttacactaaagaccgagaa 15162531  T
Q  460 cctacccgtactgaatttaacctaggaactcctagatctgagatctcatctca 512  Q
    ||||||||||   | || ||||||||||||||| ||| ||||||| |||||||    
T  15162530 cctacccgtataaacttcaacctaggaactcctcgatttgagatcccatctca 15162478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 360 - 514
Target Start/End: Original strand, 32861664 - 32861819
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgttt-gcactaatgacctagg 458  Q
    |||||||||| || ||||||||||||||||| ||||| ||||||||||||| || || | || ||||| ||||||||||||||   ||| | ||||||||    
T  32861664 cacctactctaggggctaccaagtcaggaagaaaatccactagtgtagtccttattctaaagttctcaacaaactcctcgtttataacttaagacctagg 32861763  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||| |||   || || ||||||||||||||||||| |||||||  ||||||||    
T  32861764 acctactcgtctagacttcaacctaggaactcctagatttgagatcctatctcact 32861819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 360 - 517
Target Start/End: Original strand, 2679866 - 2680019
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctagga 459  Q
    ||||||||||||| || ||||||| |||||||||||| |||| |||||||| |  || | || ||||||||||||||  ||||  |||| | || |||||    
T  2679866 cacctactctgggggcaaccaagttaggaaggaaatccactattgtagtccttgttcta-agttctcagcaaactccaagttt--acta-tcacatagga 2679961  T
Q  460 cctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    ||||| |||||||| || ||||||||| |||||||||||||||||||||||| |||||    
T  2679962 cctactcgtactgacttcaacctaggagctcctagatctgagatctcatctctcttcc 2680019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 360 - 515
Target Start/End: Complemental strand, 16655481 - 16655326
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgc-actaatgacctagg 458  Q
    |||||||||| || |||| |||| || |||||||||| ||||| ||||||| || || | || |||||||||||||||   || | |||   ||||||||    
T  16655481 cacctactctaggggctaacaagccaagaaggaaatccactagggtagtccttattcta-agttctcagcaaactccttagttacgactttagacctagg 16655383  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcactt 515  Q
    |||||||| |  ||| || ||||||||||||||||||||||||||| ||||||||||    
T  16655382 acctacccatcttgagttcaacctaggaactcctagatctgagatcccatctcactt 16655326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 333 - 401
Target Start/End: Original strand, 13268835 - 13268904
Alignment:
Q  333 gtttgttaactcagttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaatcaacta 401  Q
    ||||||| || |||||||||||||| |||||||| |||||| ||||||||||||||||||||||| ||||    
T  13268835 gtttgttcacccagttcggtgcaacttcacctacatctgggggctaccaagtcaggaaggaaatccacta 13268904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 334 - 414
Target Start/End: Original strand, 33737973 - 33738054
Alignment:
Q  334 tttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaa 414  Q
    ||||||||| |||||||||| |||   |||||||| |||  ||||||||| ||||||||||||| |||||||||||||||||    
T  33737973 tttgttaacccagttcggtgacaaacacacctactatggaggctaccaagccaggaaggaaatccactagtgtagtccgtaa 33738054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 485 - 530
Target Start/End: Complemental strand, 46739276 - 46739231
Alignment:
Q  485 gaactcctagatctgagatctcatctcacttccttacaactgatca 530  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||    
T  46739276 gaactcctagatctgagatctcatctcactcccttaaaactgatca 46739231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 315 - 363
Target Start/End: Complemental strand, 11289525 - 11289477
Alignment:
Q  315 aagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacc 363  Q
    ||||||| ||||||| | |||||||||| ||||||||||||||||||||    
T  11289525 aagtaaaaggcacatggtgtttgttaacccagttcggtgcaacgtcacc 11289477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 395
Target Start/End: Complemental strand, 17871662 - 17871610
Alignment:
Q  344 cagttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaat 395  Q
    |||||||||||||| |||||||| |||| | ||||||||||||||||||||||    
T  17871662 cagttcggtgcaacttcacctacatctgagggctaccaagtcaggaaggaaat 17871610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 395
Target Start/End: Complemental strand, 11865283 - 11865221
Alignment:
Q  334 tttgttaactcagttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaat 395  Q
    ||||||||| |||||||||||||||||  |||| |||||| ||||||||| ||||||| ||||    
T  11865283 tttgttaacccagttcggtgcaacgtcttctacgtctgggggctaccaagccaggaagaaaat 11865221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 480 - 514
Target Start/End: Original strand, 15622578 - 15622612
Alignment:
Q  480 cctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||||||||||||||||| |||||||||    
T  15622578 cctaggaactcctagatctgagatcccatctcact 15622612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 382
Target Start/End: Original strand, 24608696 - 24608745
Alignment:
Q  334 tttgttaactcagttcggtgcaacgtcacctac-tctgggagctaccaag 382  Q
    ||||||||| ||||||||||||||||||||||| ||||||  ||||||||    
T  24608696 tttgttaacccagttcggtgcaacgtcacctacgtctggggactaccaag 24608745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 253; Significance: 1e-140; HSPs: 73)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 189 - 538
Target Start/End: Complemental strand, 3290999 - 3290647
Alignment:
Q  189 tgaaattctggcacgttagacttaagatgttctataagat-tttcaacacaagttatacagaaacagatgttgaatgaaatgtttcgaacactaagctaa 287  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3290999 tgaaattctagcacgttagacttaagatgttttataagatgtttcaacacaagttatacagaaacagatgttgaataaaatgtttcgaacactaagctaa 3290900  T
Q  288 caaaagacaagtaaaacacaaa-cataaaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcag 386  Q
    |||||||||||||||||||||| |||||||||||||||||||  |||||||||||| ||||| |||||||||||||| |||||||| ||||||||| |||    
T  3290899 caaaagacaagtaaaacacaaagcataaaagtaaatggcacagtgagtttgttaacccagtttggtgcaacgtcaccaactctgggggctaccaagccag 3290800  T
Q  387 gaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaacctagg 485  Q
    |||||||||| ||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| || ||||||||    
T  3290799 gaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgttttcactatatgacctaggacctacccgtactgacttcaacctagg 3290700  T
Q  486 aactcctagatctgagatctcatctcacttccttacaactgatcatagcccct 538  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||| |||||||    
T  3290699 aactcctagatctgagatctcatttcactcccttacaactgatcacagcccct 3290647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 189 - 547
Target Start/End: Complemental strand, 48797934 - 48797574
Alignment:
Q  189 tgaaattctggcacgttagacttaagatgttctataagat-tttcaacacaagttatacagaaacagatgttgaatgaaatgtttcgaacactaagctaa 287  Q
    ||||||| |||||||| ||||||||||||||||||| ||| |||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||    
T  48797934 tgaaattatggcacgtcagacttaagatgttctatacgatgtttcaacacaggttattcacaaacagatgttgaatgaaatgtttcgaacactaagctaa 48797835  T
Q  288 caaaagacaagtaaaacacaaa-cataaaa-gtaaat-ggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtc 384  Q
    |||| |||||||||||| |||| ||||||| |||||  ||||||  |||||||||||| |||||| |||||||||||||||||||||| ||||||||| |    
T  48797834 caaa-gacaagtaaaactcaaagcataaaaagtaaaaaggcacagtgagtttgttaacccagttcagtgcaacgtcacctactctgggggctaccaagcc 48797736  T
Q  385 aggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctag 484  Q
    |||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  48797735 aggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgacttcaacctag 48797636  T
Q  485 gaactcctagatctgagatctcatctcacttccttacaactgatcatagcccctatgcttctc 547  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||| | ||||| || |||||    
T  48797635 gaactcctagatctgagatctcat-tcactcccttacaactgatcacaacccctgtgattctc 48797574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 189 - 546
Target Start/End: Original strand, 7619925 - 7620283
Alignment:
Q  189 tgaaattctggcacgttagacttaagatgttctataagat-tttcaacacaagttatacagaaacagatgttgaatgaaatgtttcgaacactaagctaa 287  Q
    |||||||||||||||||| ||||| ||||||||||| ||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  7619925 tgaaattctggcacgttatacttacgatgttctatacgatgtttcaacacaagttatacataaacagatgttgaatgagatgtttcgaacactaagctaa 7620024  T
Q  288 caaaagacaagtaaaacacaaa-cataaaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcag 386  Q
    || | |||||| ||||  |||| |||||| ||||| ||||||  |||||||||||| |||||||||||||||||||||||| |||  |||||||||||||    
T  7620025 cataggacaagaaaaatgcaaagcataaa-gtaaaaggcacagtgagtttgttaacccagttcggtgcaacgtcacctactttggaggctaccaagtcag 7620123  T
Q  387 gaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctagga 486  Q
    |||||||||| ||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| | || |||||||||    
T  7620124 gaaggaaatccactagtgtagtccttattcaatagctctcagcaaaatcctcgtttgcactaatgacctaggacttacccgtactaacttcaacctagga 7620223  T
Q  487 actcctagatctgagatctcatctcacttccttacaactgatcatagcccctatgcttct 546  Q
    |||||||||||||||||| ||||||||| ||||||||||||||| | |||||||| ||||    
T  7620224 actcctagatctgagatcccatctcactcccttacaactgatcacaacccctatgattct 7620283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 189 - 547
Target Start/End: Original strand, 14984518 - 14984875
Alignment:
Q  189 tgaaattctggcacgttagacttaagatgttctataagat-tttcaacacaagttatacagaaacagatgttgaatgaaatgtttcgaacactaagctaa 287  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||    
T  14984518 tgaaattctggcacgttagacttacgatgttctatatgatgtttcaacacaagttatacagaaacagatgttgaataagatgttttgaacactaagctaa 14984617  T
Q  288 caaaagacaagtaaaacacaaacataaaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcagg 387  Q
    |||| ||||||||| ||| || ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||| ||||    
T  14984618 caaa-gacaagtaacaca-aagcataaaaataaatggcacatagagtttgttaacccagttcggtgcaacgtcacctactctgggggctatcaagccagg 14984715  T
Q  388 aaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaa 487  Q
    ||||||||| ||||||||||||| || |||||| |||||| ||||||||  ||||||||||||||||||| ||||||||||||||| || ||||||||||    
T  14984716 aaggaaatccactagtgtagtccttattcaatatctctcaacaaactccctgtttgcactaatgacctagaacctacccgtactgacttcaacctaggaa 14984815  T
Q  488 ctcctagatctgagatctcatctcacttccttacaactgatcatagcccctatgcttctc 547  Q
     |||||||||||||||| ||||||||  ||||||||||||||| | ||||| || |||||    
T  14984816 ttcctagatctgagatcccatctcacgcccttacaactgatcacaacccctgtgattctc 14984875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 189 - 547
Target Start/End: Original strand, 15414129 - 15414486
Alignment:
Q  189 tgaaattctggcacgttagacttaagatgttctataagat-tttcaacacaagttatacagaaacagatgttgaatgaaatgtttcgaacactaagctaa 287  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||    
T  15414129 tgaaattctggcacgttagacttacgatgttctatatgatgtttcaacacaagttatacagaaacagatgttgaataagatgttttgaacactaagctaa 15414228  T
Q  288 caaaagacaagtaaaacacaaacataaaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcagg 387  Q
    |||| ||||||||| ||| || ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||| ||||    
T  15414229 caaa-gacaagtaacaca-aagcataaaaataaatggcacatagagtttgttaacccagttcggtgcaacgtcacctactctgggggctatcaagccagg 15414326  T
Q  388 aaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaa 487  Q
    ||||||||| ||||||||||||| || |||||| |||||| ||||||||  ||||||||||||||||||| ||||||||||||||| || ||||||||||    
T  15414327 aaggaaatccactagtgtagtccttattcaatatctctcaacaaactccctgtttgcactaatgacctagaacctacccgtactgacttcaacctaggaa 15414426  T
Q  488 ctcctagatctgagatctcatctcacttccttacaactgatcatagcccctatgcttctc 547  Q
     |||||||||||||||| ||||||||  ||||||||||||||| | ||||| || |||||    
T  15414427 ttcctagatctgagatcccatctcacgcccttacaactgatcacaacccctgtgattctc 15414486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 189 - 530
Target Start/End: Original strand, 14975277 - 14975619
Alignment:
Q  189 tgaaattctggcacgttagacttaagatgttctataagat-tttcaacacaagttatacagaaacagatgttgaatgaaatgtttcgaacactaagctaa 287  Q
    |||||||||||||||||||||||| ||| ||||||| ||| ||||||||||| ||||||| ||| ||||||||||| | |||||| ||||||||||||||    
T  14975277 tgaaattctggcacgttagacttacgatattctatatgatgtttcaacacaaattatacataaatagatgttgaataagatgttttgaacactaagctaa 14975376  T
Q  288 caaaagacaagtaaaacacaaa-cataaaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcag 386  Q
    |||| ||||||||||||||||| ||||||| ||||  ||||| ||| ||||||||| ||||||||||||||||||||||||| ||| || |||| | |||    
T  14975377 caaa-gacaagtaaaacacaaagcataaaaataaacagcacacagattttgttaacccagttcggtgcaacgtcacctactccgggggcaaccatgccag 14975475  T
Q  387 gaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctagga 486  Q
    ||| |||||| ||||||||| ||| || ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| || |||||||||    
T  14975476 gaacgaaatctactagtgtattccttattcaatagctctcaacaaacttctcgtttgcactaatgacctaggacctacccgtactgacttcaacctagga 14975575  T
Q  487 actcctagatctgagatctcatctcacttccttacaactgatca 530  Q
    |||||||||||||||||| ||||||||| |||||||| ||||||    
T  14975576 actcctagatctgagatcccatctcactcccttacaaatgatca 14975619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 189 - 530
Target Start/End: Original strand, 15404753 - 15405095
Alignment:
Q  189 tgaaattctggcacgttagacttaagatgttctataagat-tttcaacacaagttatacagaaacagatgttgaatgaaatgtttcgaacactaagctaa 287  Q
    |||||||||||||||||||||||| ||| ||||||| ||| ||||||||||| ||||||| ||| ||||||||||| | |||||| ||||||||||||||    
T  15404753 tgaaattctggcacgttagacttacgatattctatatgatgtttcaacacaaattatacataaatagatgttgaataagatgttttgaacactaagctaa 15404852  T
Q  288 caaaagacaagtaaaacacaaa-cataaaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcag 386  Q
    |||| ||||||||||||||||| ||||||| ||||  ||||| ||| ||||||||| ||||||||||||||||||||||||| ||| || |||| | |||    
T  15404853 caaa-gacaagtaaaacacaaagcataaaaataaacagcacacagattttgttaacccagttcggtgcaacgtcacctactccgggggcaaccatgccag 15404951  T
Q  387 gaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctagga 486  Q
    ||| |||||| ||||||||| ||| || ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| || |||||||||    
T  15404952 gaacgaaatctactagtgtattccttattcaatagctctcaacaaacttctcgtttgcactaatgacctaggacctacccgtactgacttcaacctagga 15405051  T
Q  487 actcctagatctgagatctcatctcacttccttacaactgatca 530  Q
    |||||||||||||||||| ||||||||| |||||||| ||||||    
T  15405052 actcctagatctgagatcccatctcactcccttacaaatgatca 15405095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 189 - 513
Target Start/End: Original strand, 30225926 - 30226256
Alignment:
Q  189 tgaaattctggcacgttagacttaagatgttctataagattttc-aacacaagttatacagaaacagatgttgaatgaaatgtttcgaacactaagctaa 287  Q
    ||||||| || || |||||||||| ||||||||||  ||| ||| ||||| | ||| |||||||||||||||||| || |||||| ||||| ||||||||    
T  30225926 tgaaattttgacatgttagacttacgatgttctatgcgatgttccaacaccaattacacagaaacagatgttgaacgatatgtttggaacaataagctaa 30226025  T
Q  288 caaaagacaagtaaaacacaaa-cataaaagtaaatg--gcacatagagtttgttaactcagttcggtgcaacgtcacctac-tctgggagctaccaagt 383  Q
    |||||||||||||||||| ||| || ||||||||| |  ||||| |||| |||||||| ||||||||||||||||||||||| |||||| ||||||||||    
T  30226026 caaaagacaagtaaaacaaaaagcagaaaagtaaaggaggcacaaagagattgttaacccagttcggtgcaacgtcacctacatctgggggctaccaagt 30226125  T
Q  384 caggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaacct 482  Q
    ||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||    
T  30226126 caggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttgcactatatgacctaggacctacccgtactgacttcaacct 30226225  T
Q  483 aggaactcctagatctgagatctcatctcac 513  Q
    |||||||||||||||||||||| ||||||||    
T  30226226 aggaactcctagatctgagatcccatctcac 30226256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 335 - 538
Target Start/End: Original strand, 42782747 - 42782951
Alignment:
Q  335 ttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaact 434  Q
    |||||||| ||||||||||||| ||||||||||||||| ||||||||| ||||||| ||||| ||||||||||||| || ||||||||||||||||||||    
T  42782747 ttgttaacccagttcggtgcaatgtcacctactctgggggctaccaagccaggaagaaaatccactagtgtagtccttattcaatagctctcagcaaact 42782846  T
Q  435 cctcgtttgcacta-atgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttccttacaactgatcatag 533  Q
    ||||||||||| || ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||  |||| ||    
T  42782847 cctcgtttgcaatatatgacctaggacctacccgtactgacttcaacctaggaactcctagatctgagatctcatctcactcccttacaaccaatcacag 42782946  T
Q  534 cccct 538  Q
    |||||    
T  42782947 cccct 42782951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 314 - 547
Target Start/End: Original strand, 11628610 - 11628844
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgta 413  Q
    |||| ||||||||||  |||||||||||| |||||||||||||||||||||||| |||| | ||||||   |||||||||||| |||  |||||||| ||    
T  11628610 aaagaaaatggcacagtgagtttgttaacccagttcggtgcaacgtcacctactttgggggttaccaaactaggaaggaaatccactcttgtagtcctta 11628709  T
Q  414 atcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctca 512  Q
     ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| || | ||||||||||||||||||  ||||| || ||||    
T  11628710 ttcaatagctcttagcaaactcctcgtttgcactatatgacctaggacctacccgtactgacttcagcctaggaactcctagatcgaagatcccacctca 11628809  T
Q  513 cttccttacaactgatcatagcccctatgcttctc 547  Q
    || ||||||||||||||| | ||||| || |||||    
T  11628810 ctcccttacaactgatcacaacccctgtgattctc 11628844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 314 - 514
Target Start/End: Original strand, 9564227 - 9564426
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgta 413  Q
    |||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||| ||||| ||||||| | ||||||||||| ||    
T  9564227 aaagtaaaaggcacagagagtttgttaacccagttcggtgcaacgtcacctactctgggggctacaaagccagga-ggaaatccaatagtgtagtcctta 9564325  T
Q  414 atcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcac 513  Q
     ||  |||||||||||||||||||||||| ||| || |||||||||||||||||   ||| || ||||||||||||||||||||||||||| ||||||||    
T  9564326 ttctctagctctcagcaaactcctcgtttacacaaaagacctaggacctacccgccttgacttcaacctaggaactcctagatctgagatcccatctcac 9564425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 314 - 519
Target Start/End: Complemental strand, 11560693 - 11560488
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgta 413  Q
    |||| ||||||||||  |||||||||||| ||||||||||||  ||||||||||||||| |||||||||  ||||||||||||  ||| |||||| | ||    
T  11560693 aaagaaaatggcacagtgagtttgttaacccagttcggtgcactgtcacctactctgggggctaccaagctaggaaggaaatccgctattgtagtgctta 11560594  T
Q  414 atcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcac 513  Q
     |||||||||||||| ||||||||| ||| |||||| ||||||  ||||||||||| ||| || ||||||||||||||| ||||||| ||||||||||||    
T  11560593 ttcaatagctctcagtaaactcctcatttacactaaagacctacaacctacccgtattgacttcaacctaggaactcctggatctgatatctcatctcac 11560494  T
Q  514 ttcctt 519  Q
    | ||||    
T  11560493 tccctt 11560488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 314 - 514
Target Start/End: Original strand, 42636217 - 42636418
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgt 412  Q
    |||||||| |||||||  |||||||||||  ||||||||| |||    |||||||||||  |||||||||  |||||||||||| ||||||||||||| |    
T  42636217 aaagtaaaaggcacatcaagtttgttaaccaagttcggtgacaaacatacctactctggaggctaccaagcaaggaaggaaatccactagtgtagtcctt 42636316  T
Q  413 aatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctca 512  Q
    | || |||||||||||||||||||| |||| |||||| |||||||||||||||| || ||| || |||||||||||||||||||||||||||||||||||    
T  42636317 attctatagctctcagcaaactccttgtttacactaaagacctaggacctacccatattgatttcaacctaggaactcctagatctgagatctcatctca 42636416  T
Q  513 ct 514  Q
    ||    
T  42636417 ct 42636418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 314 - 514
Target Start/End: Original strand, 9566876 - 9567075
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgta 413  Q
    ||||||||  ||||| ||||||||||||| |||||||||||||||| |||||||| ||| ||||||||| ||||| ||||||| || |||||||||| ||    
T  9566876 aaagtaaaaagcacagagagtttgttaacccagttcggtgcaacgttacctactcagggggctaccaagccagga-ggaaatccacaagtgtagtcctta 9566974  T
Q  414 atcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcac 513  Q
     ||  |||||||||||||||||||| ||| |||||| |||||||||||||||| |  ||| || ||||||||||||| ||||||||||||| ||||||||    
T  9566975 ttctctagctctcagcaaactcctcatttacactaaagacctaggacctacccatcttgagttcaacctaggaactcatagatctgagatcccatctcac 9567074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 331 - 514
Target Start/End: Complemental strand, 13455283 - 13455099
Alignment:
Q  331 gagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagca 430  Q
    ||||||||||||  |||||||||||||||||||||||||||| |||||||||  |||||||||||| ||||||||||||| || |||| ||||||  |||    
T  13455283 gagtttgttaacctagttcggtgcaacgtcacctactctgggggctaccaagcaaggaaggaaatccactagtgtagtccttattcaaaagctcttggca 13455184  T
Q  431 aactcctcgtttgcac-taatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||||| ||| | ||||| ||||||||||||||   || || ||||||||||||||||||||||||||| |||||||||    
T  13455183 aactcctcgtttacactttatgacttaggacctacccgtctagacttcaacctaggaactcctagatctgagatcccatctcact 13455099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 360 - 514
Target Start/End: Original strand, 4458756 - 4458911
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcac-taatgacctagg 458  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||||||||||| || |||| ||||||||||||||||||||||| ||| | ||||||||||    
T  4458756 cacctactctgggggctaccaagccaggaaggaaatctactagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctagg 4458855  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||||  || || ||||||||||||||||||||||||||| |||||||||    
T  4458856 acctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcact 4458911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 324 - 514
Target Start/End: Complemental strand, 4794766 - 4794574
Alignment:
Q  324 gcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagct 423  Q
    ||||| ||||||| ||||| |||||| |||||||||||||||||||||| ||||||||| ||||| ||||||| ||||||||||||| || ||  |||||    
T  4794766 gcacagagagttttttaacccagttcagtgcaacgtcacctactctgggggctaccaagccagga-ggaaatccactagtgtagtccttattctctagct 4794668  T
Q  424 ctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacct---aggaactcctagatctgagatctcatctcact 514  Q
    ||| | ||||||||||||| |||||| ||||||||||||||||||  ||| || |||||   |||||||||||||||||||||| |||||||||    
T  4794667 ctcggaaaactcctcgtttacactaaagacctaggacctacccgtcttgacttcaacctaggaggaactcctagatctgagatcgcatctcact 4794574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 360 - 514
Target Start/End: Complemental strand, 16208023 - 16207868
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcac-taatgacctagg 458  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||||||||||| || |||| ||||||||||||||||||||||| ||| | |||||||||     
T  16208023 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctagc 16207924  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||| ||| || ||||||||||||| ||||||||||||| |||||||||    
T  16207923 acctacccgtattgatttcaacctaggaactcatagatctgagatcccatctcact 16207868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 360 - 514
Target Start/End: Original strand, 14926664 - 14926818
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctagga 459  Q
    ||||||||||||| ||||||||| || |||||||||| ||||||||||||| || |||||||||||||||||||||||||||| || ||| |||||||||    
T  14926664 cacctactctgggggctaccaagccaagaaggaaatctactagtgtagtccttattcaatagctctcagcaaactcctcgtttacagtaaagacctagga 14926763  T
Q  460 cctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||| ||| || ||||||| |||| |||||| |||||| ||||||||||    
T  14926764 cctacccgtattgatttcaacctagaaacttctagatatgagatttcatctcact 14926818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 360 - 514
Target Start/End: Original strand, 15350130 - 15350284
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctagga 459  Q
    ||||||||||||| ||||||||| || |||||||||| ||||||||||||| || |||||||||||||||||||||||||||| || ||| |||||||||    
T  15350130 cacctactctgggggctaccaagccaagaaggaaatctactagtgtagtccttattcaatagctctcagcaaactcctcgtttacagtaaagacctagga 15350229  T
Q  460 cctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||| ||| || ||||||| |||| |||||| |||||| ||||||||||    
T  15350230 cctacccgtattgatttcaacctagaaacttctagatatgagatttcatctcact 15350284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 360 - 514
Target Start/End: Complemental strand, 29546279 - 29546125
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctagga 459  Q
    |||||||||| || ||||||||| ||||||||||||| |||| |||||||| || || ||| ||||||||||||| ||||||| |||||| |||||||||    
T  29546279 cacctactctcggggctaccaagccaggaaggaaatccactactgtagtccttattctataactctcagcaaacttctcgtttacactaaagacctagga 29546180  T
Q  460 cctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||  || |||| |||||||||||||||||||||||||||||||||||    
T  29546179 cctacccgtatagactttagcctaggaactcctagatctgagatctcatctcact 29546125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 360 - 512
Target Start/End: Original strand, 10279832 - 10279983
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctagga 459  Q
    ||||||||||||| ||||||||| ||||||||||||  || |||||||||| || || ||||||||||||||||||||||||||||||||  ||||||||    
T  10279832 cacctactctggg-gctaccaagccaggaaggaaattcaccagtgtagtccttattctatagctctcagcaaactcctcgtttgcactaaatacctagga 10279930  T
Q  460 cctacccgtactgaatttaacctaggaactcctagatctgagatctcatctca 512  Q
    |||| ||||| ||| || ||||||||||||| |||||||||||||||||||||    
T  10279931 cctatccgtattgatttcaacctaggaactcgtagatctgagatctcatctca 10279983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 332 - 500
Target Start/End: Original strand, 15506256 - 15506425
Alignment:
Q  332 agtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaa 431  Q
    ||||||||||| || |||| |||||||||||||||||| || ||||||||| ||| | ||||||| ||||||||||||| || |||| ||||||||||||    
T  15506256 agtttgttaacccaattcgatgcaacgtcacctactctaggggctaccaagccagaatggaaatccactagtgtagtccttattcaaaagctctcagcaa 15506355  T
Q  432 actcctcgtttgca-ctaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctga 500  Q
    ||||||||||| ||  | |||||||||||||||||||||  || || |||||||||||||||||||||||    
T  15506356 actcctcgtttacattttatgacctaggacctacccgtatagacttcaacctaggaactcctagatctga 15506425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 331 - 514
Target Start/End: Original strand, 20991529 - 20991713
Alignment:
Q  331 gagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagc 429  Q
    ||||||||| || |||||||||| |||   ||||||||||||| ||||||||| ||||||||||||| ||||||||||||| || |  ||||||||||||    
T  20991529 gagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattttatagctctcagc 20991628  T
Q  430 aaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||||| |||||| ||||||||||||| ||  |  || || |||||||||||||||||||||||||||  ||||||||    
T  20991629 aaactcctcgtttacactaaagacctaggacctatccagatagacttcaacctaggaactcctagatctgagatcctatctcact 20991713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 360 - 514
Target Start/End: Original strand, 645150 - 645305
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctagg 458  Q
    |||||||| |||| ||||| ||| ||||||||||||| || |||||||||| || |||||||||||||||||||| ||||||| ||||| ||||||||||    
T  645150 cacctactatgggggctacgaagccaggaaggaaatccaccagtgtagtccttattcaatagctctcagcaaacttctcgtttacactacatgacctagg 645249  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||| ||||||  || || ||||||||||||||||||||||||||| |||||||||    
T  645250 acctccccgtatagatttcaacctaggaactcctagatctgagatcccatctcact 645305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 360 - 514
Target Start/End: Complemental strand, 11521552 - 11521397
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctagg 458  Q
    |||||||||| || ||||||||| ||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||||||||    
T  11521552 cacctactctaggggctaccaagccaggaaggaaatctactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctagg 11521453  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||||   | |  ||||||||||||||||||||| | ||| |||||||||    
T  11521452 acctacccgtatatactccaacctaggaactcctagatctaaaatcccatctcact 11521397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 360 - 514
Target Start/End: Original strand, 16436791 - 16436945
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctagga 459  Q
    |||||||| |||| |||||||||  |||||||||||| ||||||||||||| || ||  ||||||||| |||||||||| ||| |||||| |||||||||    
T  16436791 cacctactatgggggctaccaagcaaggaaggaaatccactagtgtagtccttattctgtagctctcaacaaactcctcatttacactaaagacctagga 16436890  T
Q  460 cctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||| ||| || ||||||||||||||||||||||| ||| |||||||||    
T  16436891 cctacccgtattgatttcaacctaggaactcctagatctgacatcccatctcact 16436945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 378 - 512
Target Start/End: Original strand, 11998914 - 11999049
Alignment:
Q  378 ccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgaatt 476  Q
    ||||| ||||||||||||| ||||||||||||| || ||||||||||||| |||||||||| ||| ||||| |||||||||||||||||||||  || ||    
T  11998914 ccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcaacaaactcctcatttacactatatgacctaggacctacccgtatagactt 11999013  T
Q  477 taacctaggaactcctagatctgagatctcatctca 512  Q
     ||||||||||||||||||||||||||| |||||||    
T  11999014 caacctaggaactcctagatctgagatcccatctca 11999049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 360 - 514
Target Start/End: Original strand, 11588481 - 11588636
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctagg 458  Q
    |||||||||| |  ||||||||| ||||||||||||| ||||||||||||| || ||||||||||||   ||||||||||||| |||||  |||||||||    
T  11588481 cacctactctagcggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctctaaaaactcctcgtttacactatttgacctagg 11588580  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||||  || || |||||||||||||||| |||||||||| |||||||||    
T  11588581 acctacccgtatagacttcaacctaggaactcctatatctgagatcccatctcact 11588636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 384 - 514
Target Start/End: Original strand, 14165206 - 14165337
Alignment:
Q  384 caggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaacct 482  Q
    ||||||||||||| ||||||||||||| || ||||||||||||| |||||||||||||| ||||| |||| |||| |||||||||||  || || |||||    
T  14165206 caggaaggaaatccactagtgtagtccttattcaatagctctcaacaaactcctcgtttacactatatgatctagaacctacccgtatagacttcaacct 14165305  T
Q  483 aggaactcctagatctgagatctcatctcact 514  Q
    |||||||||||||||||||||| |||||||||    
T  14165306 aggaactcctagatctgagatcacatctcact 14165337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 332 - 493
Target Start/End: Original strand, 15436037 - 15436199
Alignment:
Q  332 agtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaa 431  Q
    ||||||||||| || |||| |||||||||||||||||| || ||||||||| ||| ||||||||| ||||||||||||| || |||| ||||||||||||    
T  15436037 agtttgttaacccaattcgatgcaacgtcacctactctaggggctaccaagccagaaaggaaatccactagtgtagtccttattcaaaagctctcagcaa 15436136  T
Q  432 actcctcgtttgcac-taatgacctaggacctacccgtactgaatttaacctaggaactccta 493  Q
    ||||||||||| ||| | ||||| |||||||||||| ||  || || ||| ||||||||||||    
T  15436137 actcctcgtttacactttatgacttaggacctacccatatagacttcaacgtaggaactccta 15436199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 314 - 465
Target Start/End: Original strand, 10658353 - 10658505
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgt 412  Q
    |||||||| ||||||   ||||||||||| |||||| ||| |||   ||||||||||||  ||||||||| ||||||||||||| ||||||||||||| |    
T  10658353 aaagtaaaaggcacagcaagtttgttaacccagttccgtgacaaacacacctactctggaggctaccaagccaggaaggaaatccactagtgtagtcctt 10658452  T
Q  413 aatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacc 465  Q
    | || ||||||||||||||||||||||||| |||||| |||||||||||||||    
T  10658453 attctatagctctcagcaaactcctcgtttacactaaagacctaggacctacc 10658505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 314 - 514
Target Start/End: Complemental strand, 26133103 - 26132903
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgt 412  Q
    |||||||| | ||||  |||||||||||| |||||||||| ||| | ||||||||||||| |||| |||| ||||||||||||| ||||||||||||| |    
T  26133103 aaagtaaaagacacaatgagtttgttaacccagttcggtgacaaagacacctactctgggggctatcaagccaggaaggaaatccactagtgtagtcctt 26133004  T
Q  413 aatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctc 511  Q
    | || |  | |||||||||||  | | ||| ||  | | |||||| |||||||||||| ||| || ||||||||||||||||||||||||||||||||||    
T  26133003 attctaatgttctcagcaaac--cacatttacaacacaagacctaagacctacccgtattgatttcaacctaggaactcctagatctgagatctcatctc 26132906  T
Q  512 act 514  Q
    |||    
T  26132905 act 26132903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 360 - 515
Target Start/End: Complemental strand, 9894208 - 9894053
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgca-ctaatgacctagg 458  Q
    |||||||||||||  |||||||||||| ||||||||| ||||||||||||| || || | || |||||||||| |||  |||| || || | ||||||||    
T  9894208 cacctactctggggactaccaagtcagtaaggaaatccactagtgtagtccttattcta-agttctcagcaaattccaagtttacaacttaagacctagg 9894110  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcactt 515  Q
    || |||||||| ||| || ||||||||||||||||||||||||||| ||||||||||    
T  9894109 acatacccgtattgacttcaacctaggaactcctagatctgagatcccatctcactt 9894053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 333 - 512
Target Start/End: Complemental strand, 23175050 - 23174870
Alignment:
Q  333 gtttgttaactcagttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaa 431  Q
    |||||||||| |||||||||||||| |||||||| ||| || ||||||||| ||||||||||||| ||||||||||||| || || | || | |||||||    
T  23175050 gtttgttaacccagttcggtgcaacatcacctacatctaggggctaccaagccaggaaggaaatccactagtgtagtccttattcta-agttatcagcaa 23174952  T
Q  432 actcctcgtttgc-actaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctca 512  Q
    |   ||||||| | |||   |||||||||| |||||||| ||| || ||| ||||||||||||||||||||||| |||||||    
T  23174951 atctctcgtttacaactctagacctaggacttacccgtattgacttcaacataggaactcctagatctgagatcccatctca 23174870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 375 - 514
Target Start/End: Original strand, 12325845 - 12325985
Alignment:
Q  375 ctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcac-taatgacctaggacctacccgtactga 473  Q
    |||||||| ||||||||||||| ||||||||||||  || |||| ||||||||||||||||||| ||| ||| | ||||||| ||||||||| |||  ||    
T  12325845 ctaccaagccaggaaggaaatccactagtgtagtcattattcaaaagctctcagcaaactcctcatttacactttatgaccttggacctacctgtataga 12325944  T
Q  474 atttaacctaggaactcctagatctgagatctcatctcact 514  Q
     || |||||||||||||||| ||||||||||  ||||||||    
T  12325945 cttcaacctaggaactcctacatctgagatccaatctcact 12325985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 334 - 520
Target Start/End: Original strand, 2076496 - 2076680
Alignment:
Q  334 tttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatc-aatagctctcagcaaa 432  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||| || |||||||||| ||||  ||||  |||| || || |||||||||||||    
T  2076496 tttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccatgaaggaaatccacta--gtagatcgtattcaaaaagctctcagcaaa 2076593  T
Q  433 ctcctcgtttgcac-taatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcctta 520  Q
      || ||||||||| | |||||||||   ||||||||| ||| || | |||| |||||||||||  ||||||| |||| ||||||||||    
T  2076594 --ccacgtttgcacttgatgacctagactctacccgtaatgatttcagcctaagaactcctagacttgagatcccatcccacttcctta 2076680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 361 - 514
Target Start/End: Complemental strand, 7586670 - 7586517
Alignment:
Q  361 acctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgca-ctaatgacctagga 459  Q
    |||||||||||| ||||||||| ||||||||||||| ||||||||||||| || || | |  |||||||||| ||||||||| || || | |||||||||    
T  7586670 acctactctggg-gctaccaagccaggaaggaaatccactagtgtagtccttattctaaacttctcagcaaaatcctcgtttacaacttaagacctagga 7586572  T
Q  460 cctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||   || || ||||||| ||||||||||||| ||||| |||||||||    
T  7586571 cctacccgtctagacttcaacctagaaactcctagatctaagatcccatctcact 7586517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 333 - 517
Target Start/End: Original strand, 15708161 - 15708345
Alignment:
Q  333 gtttgttaactcagttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaa 431  Q
    |||||||||| ||||| |||||||| |||||| | ||||||  ||||||||  |||||||||||| ||||||||||||| || |  | || | |||| ||    
T  15708161 gtttgttaacccagtttggtgcaac-tcacctgcatctggggtctaccaagctaggaaggaaatccactagtgtagtccttatttta-agttttcagaaa 15708258  T
Q  432 actcctcgtttgca-ctaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    ||||||||||| || ||   |||||| |||||||||||| ||| || ||||||||||||||||||||||||||| ||||||||||||    
T  15708259 actcctcgtttacaactctagacctacgacctacccgtattgacttgaacctaggaactcctagatctgagatcccatctcacttcc 15708345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 333 - 517
Target Start/End: Original strand, 24813914 - 24814099
Alignment:
Q  333 gtttgttaactcagttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaa 431  Q
    |||||||||| |||||||||||||| | |||||| |  ||| ||||||||| ||||||||||||| ||||||||||||| || |  | ||||||||||||    
T  24813914 gtttgttaacccagttcggtgcaacatgacctacataggggggctaccaagccaggaaggaaatccactagtgtagtccttattgta-agctctcagcaa 24814012  T
Q  432 actcctcgttt-gcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    ||| || ||||   |||   |||||||||||||||||||   | || |||||||||||||||||||||||||||  |||||||||||    
T  24814013 actactagtttaaaactctagacctaggacctacccgtatcaacttcaacctaggaactcctagatctgagatcctatctcacttcc 24814099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 334 - 517
Target Start/End: Complemental strand, 20588875 - 20588692
Alignment:
Q  334 tttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaac 433  Q
    ||||||||||||||||||||  |    | ||||| |||| ||||||||| ||||||||||||||||||||||||||  |  || | || ||||| |||||    
T  20588875 tttgttaactcagttcggtgacaaacaaactactttgggggctaccaagccaggaaggaaatcaactagtgtagtcgttgttcta-agttctcaacaaac 20588777  T
Q  434 tcctcgtttgcacta-atgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    |||  |||| || || || ||||||||||||| || ||| | || |||||| |||||||||||||||||||||||||||||||||    
T  20588776 tccaagtttacaatatatcacctaggacctactcgcactaacttcaacctaagaactcctagatctgagatctcatctcacttcc 20588692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 360 - 515
Target Start/End: Complemental strand, 23580095 - 23579940
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgca-ctaatgacctagg 458  Q
    |||||||| |||| | ||||||| || |||||||||| ||||||||||||| || |  | || | |||||||||||||||||| || |||   |||||||    
T  23580095 cacctactatgggggttaccaagccaagaaggaaatctactagtgtagtccttatttta-agttttcagcaaactcctcgtttacaactataaacctagg 23579997  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcactt 515  Q
    ||||||||||  |||||| |||||| ||||||||||||||| |||||||||||||||    
T  23579996 acctacccgtcttgaattcaacctaagaactcctagatctgggatctcatctcactt 23579940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 334 - 520
Target Start/End: Original strand, 2082915 - 2083099
Alignment:
Q  334 tttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatc-aatagctctcagcaaa 432  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||| || |||||||||| ||||  ||||   ||| || || |||||||| ||||    
T  2082915 tttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccatgaaggaaatccacta--gtagattgtattcaaaaagctctcaacaaa 2083012  T
Q  433 ctcctcgtttgcac-taatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcctta 520  Q
      || ||||||||| | |||||||||   ||||||||| ||| || | |||| |||||||||||  ||||||| |||| ||||||||||    
T  2083013 --ccacgtttgcacttgatgacctagactctacccgtaatgatttcagcctaagaactcctagacttgagatcccatcccacttcctta 2083099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 333 - 517
Target Start/End: Complemental strand, 26195626 - 26195442
Alignment:
Q  333 gtttgttaactcagttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaa 431  Q
    |||||||||| |||||||||||||| |||||||| |||||  ||||||||| || |||| ||||  |||| |||| ||| || || | || |||||||||    
T  26195626 gtttgttaacccagttcggtgcaac-tcacctacatctggaggctaccaagccaagaagaaaattcactactgtattccttattcta-agttctcagcaa 26195529  T
Q  432 actcctcgtttgca-ctaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    | ||||||||| || ||   ||||||||||||||| ||| | |||| |||||||||||||||| |||||||||  ||||||||||||    
T  26195528 attcctcgtttacaactctagacctaggacctacctgtattaaattcaacctaggaactcctaaatctgagattccatctcacttcc 26195442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 360 - 515
Target Start/End: Original strand, 10251457 - 10251612
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgca-ctaatgacctagg 458  Q
    ||||||||||||  ||||||||| |||||||||||||  |||||||||||| || || | || ||||||||||||||  | || || ||   ||||||||    
T  10251457 cacctactctggaggctaccaagccaggaaggaaatcttctagtgtagtccttattcta-agttctcagcaaactccaagcttacaactctagacctagg 10251555  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcactt 515  Q
    ||||||||||| ||| || ||| || |||||| ||||||||||||| ||||||||||    
T  10251556 acctacccgtattgacttcaacataagaactcttagatctgagatcccatctcactt 10251612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 387 - 515
Target Start/End: Complemental strand, 20925216 - 20925088
Alignment:
Q  387 gaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctagga 486  Q
    |||||||||| |||||| | |||| || || |||||||||| |||||||||||||| |||||| |||||| |||||||| ||   || || ||| |||||    
T  20925216 gaaggaaatccactagtttcgtccttattctatagctctcaacaaactcctcgtttacactaaagacctaagacctacctgtctagacttcaacttagga 20925117  T
Q  487 actcctagatctgagatctcatctcactt 515  Q
    ||||||| || ||||||| ||||||||||    
T  20925116 actcctaaatttgagatcccatctcactt 20925088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 451 - 517
Target Start/End: Original strand, 23296611 - 23296677
Alignment:
Q  451 gacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    ||||||||||||||||||  ||| || ||||||||||||||||||||||||||| ||||||||||||    
T  23296611 gacctaggacctacccgtcttgacttcaacctaggaactcctagatctgagatcccatctcacttcc 23296677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 314 - 511
Target Start/End: Original strand, 23956847 - 23957045
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgt 412  Q
    |||||||| |||||| |||||||||| ||  ||||||||| |||   || ||||| | |  ||||||||| ||||||| ||||| ||||||||||||| |    
T  23956847 aaagtaaaaggcacagagagtttgttgacctagttcggtgacaaacacatctactttagaggctaccaagccaggaagaaaatccactagtgtagtcctt 23956946  T
Q  413 aatcaatagctctcagcaaactcctcgtttgcac--taatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatct 510  Q
    | || | || |||||||||||  | ||||| ||   | | ||||||||||||||||||   || || |||||||||||||||||||||||||||||||||    
T  23956947 attctaaagttctcagcaaac--cacgtttacaactttaagacctaggacctacccgtctagacttcaacctaggaactcctagatctgagatctcatct 23957044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 374 - 514
Target Start/End: Original strand, 24902137 - 24902276
Alignment:
Q  374 gctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgca-ctaatgacctaggacctacccgtactg 472  Q
    ||||||||| ||||||||||||| ||||||||||||| || |  | || |||||| ||||  | ||||| || || | ||||||||||||||||||   |    
T  24902137 gctaccaagccaggaaggaaatccactagtgtagtccttattataaagttctcagtaaac--cacgtttacaacttaagacctaggacctacccgtctag 24902234  T
Q  473 aatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    | || ||||||||||||||||||||||||||| |||||||||    
T  24902235 acttcaacctaggaactcctagatctgagatcccatctcact 24902276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 452 - 517
Target Start/End: Original strand, 14687476 - 14687541
Alignment:
Q  452 acctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    ||||||||||||||| |||||| || ||||||||||||||||||||||||||  ||||||||||||    
T  14687476 acctaggacctacccatactgacttcaacctaggaactcctagatctgagattccatctcacttcc 14687541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 333 - 517
Target Start/End: Complemental strand, 31269224 - 31269041
Alignment:
Q  333 gtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaa 431  Q
    |||||||||| |||||||||| |||  |||||||||| ||| ||||||||| || |||||||||| |||||||||||   || |    || |||||||||    
T  31269224 gtttgttaacccagttcggtgacaaactcacctactccgggggctaccaagccatgaaggaaatccactagtgtagta--tagttctaagttctcagcaa 31269127  T
Q  432 actcctcgtttgca-ctaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    |||||  |||| || || || || |||   |||| | |||||| || ||||||||||||||||||||||||||||||||||||||||    
T  31269126 actccaagtttacaacttatcac-tagacactactcatactgatttcaacctaggaactcctagatctgagatctcatctcacttcc 31269041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 360 - 512
Target Start/End: Complemental strand, 10309631 - 10309480
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgc-actaatgacctagg 458  Q
    ||||||||||||| ||||||||| || ||||||| || ||||||||||| | |  || | |||||||||||||||||  |||| | ||| || ||||||     
T  10309631 cacctactctgggggctaccaagccaagaaggaagtccactagtgtagttcttgttcta-agctctcagcaaactccaagtttacaacttatcacctaga 10309533  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctca 512  Q
      ||||||||| || | |||||||| |||||||||||| |||||||||||||||    
T  10309532 cactacccgtattg-acttaacctaagaactcctagatttgagatctcatctca 10309480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 360 - 514
Target Start/End: Complemental strand, 23082915 - 23082762
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgc-actaatgacctagg 458  Q
    ||||||||||  | ||||||||||||||||||||||| ||||||||||||| || || | || ||||||||||  || ||||| | ||| | ||| ||||    
T  23082915 cacctactctacgggctaccaagtcaggaaggaaatccactagtgtagtccttattctaaagttctcagcaaa--ccacgtttacaacttaagacgtagg 23082818  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    | ||| ||||   || || ||||||||||||| ||||||||||||| ||| |||||    
T  23082817 atctagccgtctagacttcaacctaggaactcatagatctgagatcccatgtcact 23082762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 514
Target Start/End: Complemental strand, 10038842 - 10038715
Alignment:
Q  388 aaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgca-ctaatgacctaggacctacccgtactgaatttaacctagga 486  Q
    ||||||||| ||||||||||||| || || | || |||| |||||||| |||||| || || | |||||||||||| | |||   || || |||||| ||    
T  10038842 aaggaaatccactagtgtagtccttattctaaagttctcggcaaactcttcgtttacaacttaagacctaggacctgctcgtctagacttcaacctaaga 10038743  T
Q  487 actcctagatctgagatctcatctcact 514  Q
    |||||||||||||||||| |||||||||    
T  10038742 actcctagatctgagatcccatctcact 10038715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 360 - 517
Target Start/End: Original strand, 7508452 - 7508608
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgca-ctaatgacctagg 458  Q
    |||||||| | || ||||||||| ||||||||||||| ||||||||||||  || || | || |||||  ||||||||||||| || ||   |||||||     
T  7508452 cacctacttttggggctaccaagccaggaaggaaatccactagtgtagtctttattcta-agttctcaaaaaactcctcgtttacaactctagacctaga 7508550  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    ||||| | |   ||| || ||||||||||||||||||||||||||| ||||||||||||    
T  7508551 acctatcggct-tgacttcaacctaggaactcctagatctgagatcccatctcacttcc 7508608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 461 - 547
Target Start/End: Original strand, 24049568 - 24049653
Alignment:
Q  461 ctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttccttacaactgatcatagcccctatgcttctc 547  Q
    ||||||||| ||| || ||||||||||||||||||||||||||| |||||||| ||| ||||| | |||| ||||||| || |||||    
T  24049568 ctacccgtattgacttcaacctaggaactcctagatctgagatcacatctcac-tccctacaaataatcacagcccctgtgattctc 24049653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 334 - 517
Target Start/End: Original strand, 23057196 - 23057380
Alignment:
Q  334 tttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaa 432  Q
    ||||||||| |||||||||| |||   ||||||||||| | ||||||||| ||||||||||||  ||||||||||||| || |    || |||| |||||    
T  23057196 tttgttaacccagttcggtgacaaacacacctactctgagggctaccaagccaggaaggaaattcactagtgtagtcc-tagttctaagttctctgcaaa 23057294  T
Q  433 ctcctcgtttgc-actaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    ||||  |||| | ||| || |||| |   ||| ||||||||| || | || |||||||||||||| ||||||||||||||||||||    
T  23057295 ctccaagtttacaacttatcacctggatactatccgtactgacttcagccgaggaactcctagatttgagatctcatctcacttcc 23057380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 395
Target Start/End: Complemental strand, 10260298 - 10260236
Alignment:
Q  334 tttgttaactcagttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaat 395  Q
    |||||||||||||||||||||||| |||||| | |||||| ||||||||  ||||||||||||    
T  10260298 tttgttaactcagttcggtgcaacttcaccttcatctgggggctaccaaaccaggaaggaaat 10260236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 517
Target Start/End: Complemental strand, 20596966 - 20596809
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgc-actaatgacctagg 458  Q
    ||||||||||||| ||||||||| || |||||||||| ||||||||||| | |  || | || |||||| |||||||  |||| | ||| ||   |||||    
T  20596966 cacctactctgggggctaccaagccaagaaggaaatcgactagtgtagtacttgttcta-agttctcagaaaactccaagtttacaacttatcttctagg 20596868  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    ||| |   ||||| | || ||||||||||||||||||||||||||| ||| ||||||||    
T  20596867 acccaagtgtactaacttcaacctaggaactcctagatctgagatcccatatcacttcc 20596809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 461 - 514
Target Start/End: Original strand, 10660981 - 10661034
Alignment:
Q  461 ctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||| |||| ||| || ||||||||||||||||||||||||||| |||||||||    
T  10660981 ctactcgtattgatttcaacctaggaactcctagatctgagatcccatctcact 10661034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 461 - 513
Target Start/End: Complemental strand, 11406990 - 11406938
Alignment:
Q  461 ctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcac 513  Q
    ||||||||| ||| || ||||||||||||||||||||||||||  ||||||||    
T  11406990 ctacccgtattgacttcaacctaggaactcctagatctgagattccatctcac 11406938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 21260490 - 21260614
Alignment:
Q  319 aaatggcacatagagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatca 417  Q
    |||||||||| | |||||||| |  |||||||||| |||   ||||||||||||| |||||||| | |||||| ||||| | ||||||||||| || ||     
T  21260490 aaatggcacagacagtttgttgatccagttcggtgacaaacacacctactctgggggctaccaacttaggaagaaaatccattagtgtagtccttattct 21260589  T
Q  418 atagctctcagcaaactcctcgttt 442  Q
    | || ||||| |||||| |||||||    
T  21260590 aaagttctcaacaaactactcgttt 21260614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 395
Target Start/End: Complemental strand, 9732905 - 9732842
Alignment:
Q  333 gtttgttaactcagttcggtgcaacgtcaccta-ctctgggagctaccaagtcaggaaggaaat 395  Q
    ||||||||||||||||| |||||||||||||||  |||||| ||||||||| || ||| |||||    
T  9732905 gtttgttaactcagttcagtgcaacgtcacctagatctgggggctaccaagccatgaacgaaat 9732842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 458 - 517
Target Start/End: Original strand, 19353245 - 19353304
Alignment:
Q  458 gacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    |||||||||||| | | || |||| |||||||||||||||||||||  ||||||||||||    
T  19353245 gacctacccgtattcacttcaaccgaggaactcctagatctgagattccatctcacttcc 19353304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 189 - 223
Target Start/End: Complemental strand, 4548070 - 4548036
Alignment:
Q  189 tgaaattctggcacgttagacttaagatgttctat 223  Q
    ||||||||||||||||||| |||||||||||||||    
T  4548070 tgaaattctggcacgttagtcttaagatgttctat 4548036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 189 - 223
Target Start/End: Original strand, 11628477 - 11628511
Alignment:
Q  189 tgaaattctggcacgttagacttaagatgttctat 223  Q
    |||| ||||||||||||||||||||||||||||||    
T  11628477 tgaagttctggcacgttagacttaagatgttctat 11628511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 189 - 223
Target Start/End: Original strand, 24049373 - 24049407
Alignment:
Q  189 tgaaattctggcacgttagacttaagatgttctat 223  Q
    ||||||||| |||||||||||||||||||||||||    
T  24049373 tgaaattctcgcacgttagacttaagatgttctat 24049407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 460 - 517
Target Start/End: Complemental strand, 4547852 - 4547795
Alignment:
Q  460 cctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    |||||||||| | | || |||||| |||||||||||||||||||| ||||||| ||||    
T  4547852 cctacccgtatttacttcaacctaagaactcctagatctgagatcccatctcatttcc 4547795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 396
Target Start/End: Complemental strand, 4547917 - 4547852
Alignment:
Q  331 gagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatc 396  Q
    |||||||||||| || |||| ||||||  |||||||||| || |||| |||| |||||||||||||    
T  4547917 gagtttgttaacccaattcgatgcaacagcacctactctaggggctatcaagccaggaaggaaatc 4547852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 11560829 - 11560748
Alignment:
Q  191 aaattctggcacgttagacttaagatgttctataagat-tttcaacacaagttatacag-aaacagatgttgaatgaaatgt 270  Q
    |||||||| |||||||  ||||||||||||||| |||| || |||||| ||||| | || ||||||||||||||| ||||||    
T  11560829 aaattctgacacgttaatcttaagatgttctatgagatgttccaacacgagttacatagaaaacagatgttgaataaaatgt 11560748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 401
Target Start/End: Original strand, 12505697 - 12505766
Alignment:
Q  334 tttgttaactcagttcggtgcaacgtcacctac-tct-gggagctaccaagtcaggaaggaaatcaacta 401  Q
    ||||||||| |||||||||| |||||||||||| ||| ||| |||||||||  |||||||||||| ||||    
T  12505697 tttgttaacccagttcggtgtaacgtcacctacatctggggggctaccaagctaggaaggaaatctacta 12505766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 222
Target Start/End: Complemental strand, 12561177 - 12561144
Alignment:
Q  189 tgaaattctggcacgttagacttaagatgttcta 222  Q
    ||||||||||||||||||||||| ||||||||||    
T  12561177 tgaaattctggcacgttagacttcagatgttcta 12561144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 362 - 410
Target Start/End: Original strand, 6045340 - 6045387
Alignment:
Q  362 cctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtcc 410  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||||||||    
T  6045340 cctactctggg-gctaccaagccaggaagaaaatccactagtgtagtcc 6045387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 237; Significance: 1e-131; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 189 - 530
Target Start/End: Complemental strand, 37155841 - 37155497
Alignment:
Q  189 tgaaattctggcacgttagacttaagatgttctataagat-tttcaacacaagttatacagaaacagatgttgaatgaaatgtttcgaacactaagctaa 287  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  37155841 tgaaattctggcacgttagacttaagatgttctataagatgtttcaacataagttatacagaaacaaatgttgaatgaaatgtttcaaacactaagctaa 37155742  T
Q  288 caaaagacaagtaaaacacaaaca-taaaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcag 386  Q
    |||||||||||||||||||||| | ||||||||||||||||| ||||||||||| | |||||||||  |||||||||||||||||| ||||||||| |||    
T  37155741 caaaagacaagtaaaacacaaagaataaaagtaaatggcacaaagagtttgttagcccagttcggtataacgtcacctactctgggggctaccaagccag 37155642  T
Q  387 gaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaacctagg 485  Q
    |||||||||  ||||||||| ||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||    
T  37155641 gaaggaaattcactagtgtaatccttattcaatagctctcagcaaactcctcgtttgcactatatgacctaggacctacccgtactgacttcaacctagg 37155542  T
Q  486 aactcctagatctgagatctcatctcacttccttacaactgatca 530  Q
    |||||| |||||||||||| ||||||||| |||||||||||||||    
T  37155541 aactccaagatctgagatcccatctcactcccttacaactgatca 37155497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 188 - 547
Target Start/End: Original strand, 39080809 - 39081169
Alignment:
Q  188 ctgaaattctggcacgttagacttaagatgttctataagat-tttcaacacaagttatacagaaacagatgttgaatgaaatgtttcgaacactaagcta 286  Q
    ||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||| | ||||||||||||||| | |||||| ||||| |||||||    
T  39080809 ctgaaattctggcacgttagacttacgatgttctatatgatgtttcaacacaagttatataaaaacagatgttgaataagatgttttgaacattaagcta 39080908  T
Q  287 acaaaagacaagtaaaacacaaa-cataaaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtca 385  Q
    ||||| ||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||| |  ||||||||||||||||||||| ||||||||| ||    
T  39080909 acaaa-gacaagtaaaacacaaagcataaaaataaatggcacagagagtttgttaactcagtacaatgcaacgtcacctactctgggggctaccaagcca 39081007  T
Q  386 ggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctagg 485  Q
    ||||||||||| ||||||||||||| || ||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||| || ||||||||    
T  39081008 ggaaggaaatccactagtgtagtccttattcaatagctctcaacaaactcctcatttgcactaatgacctagaacctacccgtactgacttcaacctagg 39081107  T
Q  486 aactcctagatctgagatctcatctcacttccttacaactgatcatagcccctatgcttctc 547  Q
    |||| |||||||||||||| ||||||||| ||||||||||||||| |||||||||| |||||    
T  39081108 aactactagatctgagatcccatctcactaccttacaactgatcacagcccctatgattctc 39081169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 189 - 538
Target Start/End: Original strand, 17279730 - 17280083
Alignment:
Q  189 tgaaattctggcacgttagacttaagatgttctataagat-tttcaacacaagttatacagaaacagatgttgaatgaaatgtttcgaacactaagctaa 287  Q
    |||||||||||||||||||||||| |||||| | |  ||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||     
T  17279730 tgaaattctggcacgttagacttacgatgttatgtgcgatgtttcaacacaagttatacagaaacaaatgttgaataaaatgtttcgaacactaagctac 17279829  T
Q  288 caaaagacaagtaaaaca---caaa-cataaaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagt 383  Q
    || |||||||| |||| |   |||| |||||| ||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||| | |||||||     
T  17279830 cacaagacaagaaaaaaaattcaaagcataaa-gtaaaaggcacagagagtttgttaacccagttcggtgcaacgtcacctactctgggggataccaagc 17279928  T
Q  384 caggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaaccta 483  Q
    ||||||||||||| ||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  17279929 caggaaggaaatccactagtgtagttcgtattcaatagctctaagcaaactcctcgtttgcactaatgacctaggacctacccatactgacttcaaccta 17280028  T
Q  484 ggaactcctagatctgagatctcatctcacttccttacaactgatcatagcccct 538  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||| |||||||    
T  17280029 ggaacttctagatctgagatcccatctcagtcccttacaactgatcacagcccct 17280083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 189 - 547
Target Start/End: Complemental strand, 17881056 - 17880694
Alignment:
Q  189 tgaaattctggcacgttagacttaagatgttctataagatttt-caacacaagttatacagaaacagatgttgaatgaaatgtttcgaacactaagctaa 287  Q
    |||||||| || |||||||  ||| ||||||||||  ||| || |||||| | ||| ||| ||||| ||||||||  | |||||| ||||| ||||||||    
T  17881056 tgaaattcaggaacgttagctttaggatgttctatgcgatgttgcaacaccaattacacaaaaacaaatgttgaacaatatgtttggaacattaagctaa 17880957  T
Q  288 caaa-agacaagtaaa-acacaaacataaaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggag-ctaccaagtc 384  Q
    |||  ||||||||||| | ||||||| ||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||| | |||||||| |    
T  17880956 caagcagacaagtaaagaaacaaacaaaaaagtaaatggcacagtgagtttgttaacccagttcggtgcaacgtcacctactctggggggctaccaagcc 17880857  T
Q  385 aggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctag 484  Q
    | |||||||||| ||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| || |||||||    
T  17880856 aagaaggaaatccactagtgtagttcttattcaatagctctcagcaaactcctcgtttgcactaatgacctaggaacgacccgtactgacttcaacctag 17880757  T
Q  485 gaactcctagatctgagatctcatctcacttccttacaactgatcatagcccctatgcttctc 547  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| | ||||| || |||||    
T  17880756 gaactcctagatctgagatctcatctcactcccttacaactgatcacaacccctgtgattctc 17880694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 352 - 530
Target Start/End: Original strand, 8726853 - 8727031
Alignment:
Q  352 tgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatg 451  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||| |    
T  8726853 tgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccatattcaatagctctcagcaaactcctcgtttgcactaacg 8726952  T
Q  452 acctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttccttacaactgatca 530  Q
    |||||||||||||||||| ||| || |||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  8726953 acctaggacctacccgtaatgacttcaacctatgaactcctagatctgagatctcatctcactcccttacaactgatca 8727031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 314 - 547
Target Start/End: Complemental strand, 33466348 - 33466116
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgta 413  Q
    |||| ||| |||||| ||||||||||||  ||||||||||||||||||||||||||||| ||||||||| ||||||| ||||| ||||||||||||| ||    
T  33466348 aaagaaaaaggcacagagagtttgttaatccagttcggtgcaacgtcacctactctgggggctaccaagccaggaagaaaatccactagtgtagtcctta 33466249  T
Q  414 atcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcac 513  Q
     |||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||| | ||||||||    
T  33466248 ttcaaaagctctcagcaaacttctcgtttgcactaatgacctaggacctaccggtactgacttcaacctaggaactcctagatctgaga-cccatctcac 33466150  T
Q  514 ttccttacaactgatcatagcccctatgcttctc 547  Q
    | |||||||| | |||| ||||||| || |||||    
T  33466149 tcccttacaaataatcacagcccctgtgattctc 33466116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 360 - 514
Target Start/End: Original strand, 24091974 - 24092128
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctagga 459  Q
    |||||||||| || ||||||||| ||||||||||||| ||||||||||||| || || | ||||||||||||||||||||||| |||||| |||||||||    
T  24091974 cacctactctaggggctaccaagccaggaaggaaatccactagtgtagtccttattctacagctctcagcaaactcctcgtttacactaaagacctagga 24092073  T
Q  460 cctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||| ||| || ||||||||||||||||||||||||||| |||||||||    
T  24092074 cctacccgtattgatttcaacctaggaactcctagatctgagatcccatctcact 24092128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 332 - 514
Target Start/End: Original strand, 9996487 - 9996670
Alignment:
Q  332 agtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagca 430  Q
    ||||||||||| |||||||||| |||   ||||||||||||   ||||||||||||||| |||||| |||| |||||||| || || |||||||||||||    
T  9996487 agtttgttaacccagttcggtgacaaacacacctactctggagactaccaagtcaggaatgaaatccactattgtagtccttattctatagctctcagca 9996586  T
Q  431 aactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||| ||| |||||| ||||||||||||||||||| ||| || ||||||||||||||||| ||||||||| |||||||||    
T  9996587 aactcctcatttacactaaagacctaggacctacccgtattgatttcaacctaggaactcctaggtctgagatcacatctcact 9996670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 360 - 514
Target Start/End: Original strand, 22476247 - 22476402
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctagg 458  Q
    |||||||| || | ||||||||| ||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||||||||    
T  22476247 cacctactttgagggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctagg 22476346  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||| ||  || || ||||||||||||||||||| ||||||| |||||||||    
T  22476347 acctacccatatagacttcaacctaggaactcctagatttgagatcccatctcact 22476402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 360 - 514
Target Start/End: Original strand, 33977075 - 33977229
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctagga 459  Q
    ||||||||||||| ||||||||||||| ||||||||| ||||||||||||| || || |||||||||||||||||||| |||| |||||| ||||||| |    
T  33977075 cacctactctgggggctaccaagtcagaaaggaaatccactagtgtagtccttattctatagctctcagcaaactccttgtttacactaaagacctagaa 33977174  T
Q  460 cctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||   | || || ||||||||||||||||||||||| ||||||||||    
T  33977175 cctacccgtatatacttcaatctaggaactcctagatctgagatatcatctcact 33977229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 360 - 514
Target Start/End: Complemental strand, 11221409 - 11221260
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctagga 459  Q
    ||||||||||||| ||||||||  ||||||||||||     |||||||||| || || ||||||||||||||||||||||||| |||||| |||||||||    
T  11221409 cacctactctgggggctaccaaaccaggaaggaaat-----agtgtagtccttattctatagctctcagcaaactcctcgtttacactaaagacctagga 11221315  T
Q  460 cctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||  || || ||||||||||||||||||||||||||| |||||||||    
T  11221314 cctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcact 11221260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 314 - 514
Target Start/End: Original strand, 1683948 - 1684146
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgta 413  Q
    |||||||| ||||||   ||||||||||| || |||||||||||||||||||||||||  ||||||||| ||||| ||||||| ||||||||||||| ||    
T  1683948 aaagtaaaaggcacaagaagtttgttaacccaattcggtgcaacgtcacctactctggc-gctaccaagccagga-ggaaatccactagtgtagtcctta 1684045  T
Q  414 atcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcac 513  Q
     ||  || ||| ||||||||||||||||| |||||| |||||||| | |||||||  ||| || |||||| |||||||||| ||||||||| ||||||||    
T  1684046 ttctctaactcccagcaaactcctcgtttacactaaagacctaggtcatacccgtcttgacttcaacctaagaactcctagttctgagatcccatctcac 1684145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 314 - 517
Target Start/End: Original strand, 23249705 - 23249909
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgta 413  Q
    |||||||| ||||||  |||||||||||| || |||||||||||||||||||||||||| ||||||||| || |||||||||| ||||||||||||| ||    
T  23249705 aaagtaaaaggcacaacgagtttgttaacccaattcggtgcaacgtcacctactctgggggctaccaagccaagaaggaaatccactagtgtagtcctta 23249804  T
Q  414 atcaatagctctcagcaaactcctcgtttgc-actaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctca 512  Q
     |  |    | ||| ||||||| | |||||| |||   ||||||||||| ||| ||| ||| || ||||||||||||||||||||||||||| |||||||    
T  23249805 ttataagtttatcaacaaactcattgtttgcaactctagacctaggaccaacctgtattgacttcaacctaggaactcctagatctgagatcccatctca 23249904  T
Q  513 cttcc 517  Q
    |||||    
T  23249905 cttcc 23249909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 374 - 489
Target Start/End: Original strand, 22874209 - 22874324
Alignment:
Q  374 gctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactga 473  Q
    |||||||||  |||||||||||| ||||||||||||| || |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  22874209 gctaccaagctaggaaggaaatccactagtgtagtccttattcaaaagctctcagcaaactcctcatttgcactaatgacctaggacctacccgtactga 22874308  T
Q  474 atttaacctaggaact 489  Q
     || ||||| ||||||    
T  22874309 cttcaacctgggaact 22874324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 360 - 514
Target Start/End: Complemental strand, 23541553 - 23541398
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctagg 458  Q
    ||||||||||||| ||||||||  | ||||||||||| ||||||||||| | || |||||||||||||||||||||  ||||| ||||| || |||||||    
T  23541553 cacctactctgggggctaccaaaccgggaaggaaatccactagtgtagtacttattcaatagctctcagcaaactcgccgtttacactatattacctagg 23541454  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||| ||||  ||||| |||||||||||||||||||||||||||  ||||||||    
T  23541453 acctactcgtatagaattcaacctaggaactcctagatctgagatcctatctcact 23541398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 360 - 514
Target Start/End: Complemental strand, 13660513 - 13660360
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctagga 459  Q
    ||||||||||||| ||||||||   ||||| |||||| ||||||||||||  || || | ||||||||||||||||||||||| | |||| ||||| |||    
T  13660513 cacctactctgggggctaccaaactaggaaagaaatccactagtgtagtctttattcta-agctctcagcaaactcctcgtttactctaaagacctggga 13660415  T
Q  460 cctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||  || || ||||||||||||||||||||||||||| |||||||||    
T  13660414 cctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcact 13660360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 360 - 514
Target Start/End: Complemental strand, 13719156 - 13719003
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctagga 459  Q
    ||||||||||||| ||||||||   ||||| |||||| ||||||||||||  || || | ||||||||||||||||||||||| | |||| ||||| |||    
T  13719156 cacctactctgggggctaccaaactaggaaagaaatccactagtgtagtctttattcta-agctctcagcaaactcctcgtttactctaaagacctggga 13719058  T
Q  460 cctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||  || || ||||||||||||||||||||||||||| |||||||||    
T  13719057 cctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcact 13719003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 333 - 515
Target Start/End: Complemental strand, 23864637 - 23864454
Alignment:
Q  333 gtttgttaactcagttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaa 431  Q
    |||| ||||| || || |||||||| |||||||| |||||| | ||||||||||||||| ||||| ||||||||||||| || || | || |||||||||    
T  23864637 gttttttaacccaatttggtgcaacatcacctacatctgggggataccaagtcaggaagaaaatccactagtgtagtccttattcta-agttctcagcaa 23864539  T
Q  432 actcctcgtttgcactaat-gacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcactt 515  Q
    |||||||| || || |  | ||||||||||||||||||  ||| || ||||||||||||||||||||||||||| ||||||||||    
T  23864538 actcctcgcttacaattctagacctaggacctacccgttttgacttcaacctaggaactcctagatctgagatcccatctcactt 23864454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 387 - 514
Target Start/End: Original strand, 22485177 - 22485305
Alignment:
Q  387 gaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaacctagg 485  Q
    |||| ||||| ||||||||||||| || |||||||||||||||||||||||||||| ||||| |||||||||||  || |||||  || || |||||| |    
T  22485177 gaagaaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggaattatccgtatagacttcaacctaag 22485276  T
Q  486 aactcctagatctgagatctcatctcact 514  Q
    ||||||||||||||||||| |||||||||    
T  22485277 aactcctagatctgagatcccatctcact 22485305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 384 - 514
Target Start/End: Complemental strand, 27925564 - 27925434
Alignment:
Q  384 caggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaaccta 483  Q
    ||||||||||||| ||||||||||||| || || |||||||||| |||||||| | ||| ||| || ||| |||||||||||||||  || || | ||||    
T  27925564 caggaaggaaatccactagtgtagtccttattctatagctctcaacaaactccacatttacaccaaagacataggacctacccgtatagacttcatccta 27925465  T
Q  484 ggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||||||||||||| |||||||||    
T  27925464 ggaactcctagatctgagatcccatctcact 27925434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 418 - 514
Target Start/End: Original strand, 45136190 - 45136286
Alignment:
Q  418 atagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||||||||||||| ||| |||||| |||||||||||||||||||  || || ||||||||||||||||||| ||||||| |||||||||    
T  45136190 atagctctcagcaaactcctcatttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatatgagatcccatctcact 45136286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 314 - 510
Target Start/End: Original strand, 25240375 - 25240573
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgt 412  Q
    |||||||| || |||| ||||||||| || |||||||||| |||   |||||||   ||| ||||||||  ||||||||||||| || |||||||||| |    
T  25240375 aaagtaaaaggtacattgagtttgtttacccagttcggtgacaaacacacctaccaagggggctaccaaaccaggaaggaaatccaccagtgtagtcctt 25240474  T
Q  413 aatcaatagctctcagcaaactcctcgtttgcac-taatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatct 510  Q
    | |||| ||||||||||||||||||  ||| ||| | | ||||||||||||||||||   || || |||||| ||||||||||||||| ||||||||||    
T  25240475 attcaaaagctctcagcaaactccttctttacactttacgacctaggacctacccgtctagacttcaacctaagaactcctagatctgcgatctcatct 25240573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 360 - 517
Target Start/End: Complemental strand, 12814734 - 12814577
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgc-actaatgacctagg 458  Q
    ||||||||||||| ||||||||| ||||||||||||  ||||||||||||| || || | || |||||||||||||||||||| | |||   ||||||||    
T  12814734 cacctactctgggggctaccaagccaggaaggaaattcactagtgtagtccttattcta-agttctcagcaaactcctcgtttacaactgtagacctagg 12814636  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    ||||||||||  |||  | ||||||| ||||||||||| | |||||  |||||||||||    
T  12814635 acctacccgtcttgacgtcaacctagaaactcctagatttaagatccaatctcacttcc 12814577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 331 - 514
Target Start/End: Complemental strand, 24850603 - 24850420
Alignment:
Q  331 gagtttgttaactcagttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagc 429  Q
    |||||||||||| ||||| ||  |||| |||||||| | |||| |||||||||  |||||||||||| ||||||||||||| || || | || | |||||    
T  24850603 gagtttgttaacccagtttggcacaac-tcacctacatatgggggctaccaagctaggaaggaaatccactagtgtagtccttattcta-agttatcagc 24850506  T
Q  430 aaactcctcgtttgca-ctaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||||| || ||   ||||||||| |||||| || ||| || || |||||||||||||||||| |||||||||||||||    
T  24850505 aaactcctcgtttacaactctagacctaggagctacccatattgatttcaatctaggaactcctagatctaagatctcatctcact 24850420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 331 - 442
Target Start/End: Original strand, 33961748 - 33961860
Alignment:
Q  331 gagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagc 429  Q
    ||||||||| || |||||||||  |||  |||||||||||||| ||||||| |||||||||||||||||||||||||||||||| || ||||  |||| |    
T  33961748 gagtttgttgacccagttcggtaacaaactcacctactctgggggctaccacgtcaggaaggaaatcaactagtgtagtccgtattctataggactcaac 33961847  T
Q  430 aaactcctcgttt 442  Q
    |||||||| ||||    
T  33961848 aaactccttgttt 33961860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 360 - 517
Target Start/End: Complemental strand, 1562509 - 1562352
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgca-ctaatgacctagg 458  Q
    |||||||| |||| ||||||||| ||||||||||||| ||||||||||||| |  |  | || || ||||||| | |   ||| || || || |||||||    
T  1562509 cacctactttgggggctaccaagccaggaaggaaatccactagtgtagtccttgtttta-agttcccagcaaatttcaaatttacaacttataacctagg 1562411  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    ||||||||||||||| || ||||||  |||||||| |||||||||| ||||||||||||    
T  1562410 acctacccgtactgacttcaacctaaaaactcctacatctgagatcccatctcacttcc 1562352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 364 - 514
Target Start/End: Complemental strand, 20255021 - 20254863
Alignment:
Q  364 tactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgc-actaatgacc-------t 455  Q
    |||| |||| |||||||||  |||||||||||| |||||||| |||| || || | || |||||||||||||||||||| | ||| | ||||       |    
T  20255021 tactatgggggctaccaagctaggaaggaaatccactagtgtggtccttattctaaagttctcagcaaactcctcgtttacaactgaagacctaggacgt 20254922  T
Q  456 aggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||||||   || || ||||||||||||||||||||||| ||| |||||||||    
T  20254921 aggacctacccgtctagacttcaacctaggaactcctagatctgacatcccatctcact 20254863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 484
Target Start/End: Original strand, 24384552 - 24384702
Alignment:
Q  335 ttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaac 433  Q
    ||||||||||| ||||||| |||   ||| ||||||||| ||||||||| ||||||| ||||| ||||||||||||| || || | || |||||||||||    
T  24384552 ttgttaactcaattcggtgacaaacacacgtactctgggggctaccaagccaggaagaaaatccactagtgtagtccttattcta-agttctcagcaaac 24384650  T
Q  434 tcctcgtttgc-actaatgacctaggacctacccgtactgaatttaacctag 484  Q
    |||  |||| | ||| | |||||||| |||||||||| ||| || |||||||    
T  24384651 tccaagtttacaacttaagacctagggcctacccgtagtgacttcaacctag 24384702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 408
Target Start/End: Original strand, 45133634 - 45133729
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagt 408  Q
    |||||||| | ||||| ||||||||| || |||||||||| |||   ||||||||||||| |||| |||| ||||||||||||| |||||||||||    
T  45133634 aaagtaaaggacacattgagtttgttgacccagttcggtgacaaacacacctactctgggggctatcaagccaggaaggaaatccactagtgtagt 45133729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 334 - 517
Target Start/End: Original strand, 12240228 - 12240416
Alignment:
Q  334 tttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccg---taatcaatagctctcagc 429  Q
    ||||||||| |||||||||| |||   ||||||||| ||  ||||||||  |||||||||||||  |||||||||||||   || |    || |||||||    
T  12240228 tttgttaacccagttcggtgacaaacacacctactccggaggctaccaaaccaggaaggaaatccgctagtgtagtccgacctagttctaagttctcagc 12240327  T
Q  430 aaactcctcgtttgca-ctaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    |||||||  |||| || || || ||||||   |||| |||||||| || | |||||||||||||||| |||||||||||||||||||||    
T  12240328 aaactccaagtttacaacttatcacctagctactactcgtactgacttcagcctaggaactcctagacctgagatctcatctcacttcc 12240416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 395
Target Start/End: Original strand, 24482308 - 24482370
Alignment:
Q  334 tttgttaactcagttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaat 395  Q
    ||||||||| ||||| ||||||||||||||||| |||||| |||| ||||||| |||||||||    
T  24482308 tttgttaacccagtttggtgcaacgtcacctacatctgggggctaacaagtcaagaaggaaat 24482370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 303
Target Start/End: Original strand, 8726772 - 8726820
Alignment:
Q  255 atgttgaatgaaatgtttcgaacactaagctaacaaaagacaagtaaaa 303  Q
    ||||||||| ||||||||||||||| ||||||||| |||||||| ||||    
T  8726772 atgttgaataaaatgtttcgaacaccaagctaacataagacaagaaaaa 8726820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 478 - 511
Target Start/End: Original strand, 33961876 - 33961909
Alignment:
Q  478 aacctaggaactcctagatctgagatctcatctc 511  Q
    ||||||||||||||||||||||||||| ||||||    
T  33961876 aacctaggaactcctagatctgagatcccatctc 33961909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 332 - 395
Target Start/End: Original strand, 32179295 - 32179359
Alignment:
Q  332 agtttgttaactcagttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaat 395  Q
    ||||||||||| |||||||||||||| |||||||| |||||  ||||| |||| |||||| ||||    
T  32179295 agtttgttaacccagttcggtgcaacttcacctacgtctggaggctacaaagttaggaagaaaat 32179359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 233; Significance: 1e-128; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 189 - 538
Target Start/End: Complemental strand, 26183549 - 26183198
Alignment:
Q  189 tgaaattctggcacgttagacttaagatgttctataagat-tttcaacacaagttatacagaaacagatgttgaatgaaatgtttcgaacactaagctaa 287  Q
    |||||||||||||||||||| ||||||||||||||| ||| ||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||    
T  26183549 tgaaattctggcacgttagaattaagatgttctatacgatgtttcaacaccaattatacagaaacagatgttgaataaaatgtttcgaacactaagctaa 26183450  T
Q  288 caaaagacaagtaaaacacaaa-cataaaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcag 386  Q
    |||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||    
T  26183449 caaa-gacaagtaaaacacaaagcataaaagtaaatggcacagagagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccag 26183351  T
Q  387 gaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaacctagg 485  Q
    |||||||||  ||||||||||||| || |||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||| || ||||||||    
T  26183350 gaaggaaatacactagtgtagtccttattcaatagctctcagcaaacttctcgtttgcactatatgacctagaacctacccgtactgacttcaacctagg 26183251  T
Q  486 aactcctagatctgagatctcatctcacttccttacaactgatcatagcccct 538  Q
    ||||||||||||||||||| ||||||||| | ||| ||||||||| |||||||    
T  26183250 aactcctagatctgagatcccatctcactcctttaaaactgatcacagcccct 26183198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 189 - 538
Target Start/End: Complemental strand, 7898229 - 7897879
Alignment:
Q  189 tgaaattctggcacgttagacttaagatgttctataagat-tttcaacacaagttatacagaaacagatgttgaatgaaatgtttcgaacactaagctaa 287  Q
    ||||||||||||||||||||||||  || || |||  ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7898229 tgaaattctggcacgttagacttacaatattttatgcgatgtttcaacacaagttatacagaaacagatgttgaataaaatgtttcgaacactaagctaa 7898130  T
Q  288 caaaagacaagtaaaacacaaa-cataaaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcag 386  Q
    || |||||||| ||||  |||| |||||| ||||| | ||||  |||||||||||| ||||||||||||||||||||||||||||  ||||||||| |||    
T  7898129 cacaagacaagaaaaatgcaaagcataaa-gtaaaagacacagtgagtttgttaacccagttcggtgcaacgtcacctactctggaggctaccaagccag 7898031  T
Q  387 gaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctagga 486  Q
    |||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  7898030 gaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgacttcaacctagga 7897931  T
Q  487 actcctagatctgagatctcatctcacttccttacaactgatcatagcccct 538  Q
    |||| ||||||||||||| ||||||||| ||||||||||||||| |||||||    
T  7897930 actcttagatctgagatcccatctcactcccttacaactgatcacagcccct 7897879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 191 - 538
Target Start/End: Complemental strand, 17921096 - 17920748
Alignment:
Q  191 aaattctggcacgttagacttaagatgttctataagat-tttcaacacaagttatacagaaacagatgttgaatgaaatgtttcgaacactaagctaaca 289  Q
    |||||||| |||||||||||||  |||||||||| ||| ||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  17921096 aaattctgccacgttagacttataatgttctatacgatgtttaaatacaagttatacagaaacagatgttgaataaaatgtttcgaacactaagctaaca 17920997  T
Q  290 aaagacaagtaaaacacaaa-cataaaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcagga 388  Q
     |||||||| ||||  |||| ||||||| |||| ||||||  |||||||||||| |||||||||||||||||||||||||| || ||||||||| |||||    
T  17920996 caagacaagaaaaatgcaaagcataaaa-taaaaggcacagtgagtttgttaacccagttcggtgcaacgtcacctactctaggggctaccaagccagga 17920898  T
Q  389 aggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaac 488  Q
    |||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||    
T  17920897 aggaaatccactagtgtagtccgtattcaaaagctctcagcaaactcctcgtttgcacttatgacctaggacctacccgtactgacttcaacctaggaac 17920798  T
Q  489 tcctagatctgagatctcatctcacttccttacaactgatcatagcccct 538  Q
    |||||||||||||||| ||||| ||| | ||||||||||||| |||||||    
T  17920797 tcctagatctgagatcccatcttactcctttacaactgatcacagcccct 17920748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 194 - 536
Target Start/End: Complemental strand, 20498464 - 20498119
Alignment:
Q  194 ttctggcacgttagacttaagatgttctataagat-tttcaacacaagttatacagaaacagatgttgaatgaaatgtttcgaacactaagctaacaaaa 292  Q
    ||||||||| ||||||||||||| || | || ||| |||||| ||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  20498464 ttctggcacattagacttaagatattttgtacgatgtttcaatacaggttattcacaaacagatgttgaatgaaatgtttcgaacactaagctaacaaaa 20498365  T
Q  293 gacaagtaaaacacaaa-cataaaagtaaatgg-cacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaag 390  Q
     |||||||||||  ||| ||||||||||||  | ||||  || ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||    
T  20498364 -acaagtaaaacgtaaagcataaaagtaaaaagacacagtgaatttgttaacccagttcggtgcaacgtcacctactctggaggctaccaagtcaggaag 20498266  T
Q  391 gaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaacctaggaact 489  Q
    |||||| ||| ||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||    
T  20498265 gaaatccactcgtgtagtccttattcaatagctctcagcaaactcctcgtttgcactatatgacctaggacctacccgtactgacttcaacctaggaact 20498166  T
Q  490 cctagatctgagatctcatctcacttccttacaactgatcatagccc 536  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||    
T  20498165 cctagatctgagatctcatctcactcccttacaactgatcacagccc 20498119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 314 - 514
Target Start/End: Complemental strand, 20845983 - 20845782
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgta 413  Q
    |||||||| |||||| ||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||| ||    
T  20845983 aaagtaaaaggcacacagagtttgttaacccagttcggtgcaacgtcacctactatgggggctaccaagtcaggaaggaaatccactagtgtagtcctta 20845884  T
Q  414 atcaatagctctcagcaaactcctcgtttgcac-taatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctca 512  Q
     |||| | ||||||||||||||||||||| ||| | ||||||||||||||||||||   || || |||||||||||||||||||||||||||| ||||||    
T  20845883 ttcaaaatctctcagcaaactcctcgtttacactttatgacctaggacctacccgtctagacttcaacctaggaactcctagatctgagatcttatctca 20845784  T
Q  513 ct 514  Q
    ||    
T  20845783 ct 20845782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 314 - 514
Target Start/End: Complemental strand, 20741125 - 20740925
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgta 413  Q
    ||||| |||||||||  |||| ||||||| || |||||| ||||||||||||||||||| |||||||||  |||| ||||||| ||||||||||||| ||    
T  20741125 aaagtcaatggcacagtgagtctgttaacccaattcggttcaacgtcacctactctgggggctaccaagcgaggagggaaatccactagtgtagtcctta 20741026  T
Q  414 atcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcac 513  Q
     ||  |||||||||||||||||||||||| |||||| ||||||||||||| ||||  ||| || ||||||||||||||||||||||||||||||||||||    
T  20741025 ttctctagctctcagcaaactcctcgtttacactaaagacctaggacctatccgtcttgacttcaacctaggaactcctagatctgagatctcatctcac 20740926  T
Q  514 t 514  Q
    |    
T  20740925 t 20740925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 360 - 514
Target Start/End: Complemental strand, 26329356 - 26329202
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctagga 459  Q
    ||||||||||| ||||||||||| ||||||||||||| ||| ||||||||| || || ||||||||||||||||||||||||| |||||| |||||||||    
T  26329356 cacctactctgtgagctaccaagccaggaaggaaatccactggtgtagtccttattctatagctctcagcaaactcctcgtttacactaaagacctagga 26329257  T
Q  460 cctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||| ||| || ||||||||||||||||||||||||||| |||||||||    
T  26329256 cctacccgtattgatttcaacctaggaactcctagatctgagatcccatctcact 26329202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 189 - 362
Target Start/End: Original strand, 20286650 - 20286825
Alignment:
Q  189 tgaaattctggcacgttagacttaagatgttctataagat-tttcaacacaagttatacagaaacagatgttgaatgaaatgtttcgaacactaagctaa 287  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||| | ||||||||||| |||||||||||| ||||||||    
T  20286650 tgaaattctggcacgttagacttaagatgttctatacgatatttcaacacaagttatactgaaagaaatgttgaatgatatgtttcgaacattaagctaa 20286749  T
Q  288 caaaagacaagtaaaaca-caaacataaaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcac 362  Q
    || |||||||||||||||  ||||| ||||||||||||||||    |||||||||| ||||||||| |||||||||    
T  20286750 cagaagacaagtaaaacagaaaacacaaaagtaaatggcacagtcggtttgttaacccagttcggtacaacgtcac 20286825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 331 - 514
Target Start/End: Complemental strand, 30605863 - 30605679
Alignment:
Q  331 gagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagc 429  Q
    ||||||||| || |||||||||| |||   ||||||||||||| ||||||||  ||||||||||||| ||||||| ||||| || || ||||||||||||    
T  30605863 gagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaatccaggaaggaaatccactagtgcagtccttattctatagctctcagc 30605764  T
Q  430 aaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||||| |||||| |||||||||||||||| || ||| || || ||||||||||||||||||||||||||||||||||    
T  30605763 aaactcctcgtttacactaaagacctaggacctacccatattgatttcaatctaggaactcctagatctgagatctcatctcact 30605679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 314 - 514
Target Start/End: Complemental strand, 22404951 - 22404749
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgt 412  Q
    |||||||||  ||||  ||||||||| || |||||||||| |||   ||||| |||| || ||||||||| ||||||||||||| |||||| |||||| |    
T  22404951 aaagtaaataacacaatgagtttgttgacccagttcggtgacaaacacacctgctctaggggctaccaagccaggaaggaaatccactagtatagtcctt 22404852  T
Q  413 aatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctc 511  Q
    | |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||  || || ||||||||||||||||||||||||||| ||||||    
T  22404851 attcaatagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctc 22404752  T
Q  512 act 514  Q
    |||    
T  22404751 act 22404749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 331 - 514
Target Start/End: Original strand, 13338579 - 13338762
Alignment:
Q  331 gagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagc 429  Q
    |||||||||||| |||||||||| |||   ||| ||||||||| ||||||||| ||||||||||||| ||||||||| ||| || || ||| ||||||||    
T  13338579 gagtttgttaacccagttcggtgacaaacacacatactctggg-gctaccaagccaggaaggaaatccactagtgtaatccttattctataactctcagc 13338677  T
Q  430 aaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||||| |||||| |||||||||| |||| ||| ||| ||  ||||||||||||||||||||||||||||||||||||    
T  13338678 aaactcctcgtttacactaaagacctaggacataccggtattgatttctacctaggaactcctagatctgagatctcatctcact 13338762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 360 - 514
Target Start/End: Complemental strand, 13735116 - 13734961
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcac-taatgacctagg 458  Q
    ||||||||||||| | ||||||||||||||||||||| | ||||||||||| || |||| ||||||||||||||||||||||| ||| | ||||||||||    
T  13735116 cacctactctgggggttaccaagtcaggaaggaaatccattagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctagg 13735017  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||   || || ||||||||||||||||||||||||||| |||||||||    
T  13735016 acctacccgtctagacttcaacctaggaactcctagatctgagatcccatctcact 13734961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 314 - 514
Target Start/End: Complemental strand, 22184786 - 22184586
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgt 412  Q
    |||||||| |||||| ||||||||||| | ||||||||  |||| |||||||| ||| || ||||||||| ||||||||||||| | |||| |||||||     
T  22184786 aaagtaaacggcacagagagtttgttatcccagttcggcacaac-tcacctacatctaggggctaccaagccaggaaggaaatccattagtctagtccga 22184688  T
Q  413 aatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctca 512  Q
    | || | ||||||||||||||||||||||| |||| | |||||| |||||||||| | ||| || ||||||||||||||||||||||||||| |||||||    
T  22184687 attctaaagctctcagcaaactcctcgtttacacttaagacctatgacctacccgcattgatttcaacctaggaactcctagatctgagatcccatctca 22184588  T
Q  513 ct 514  Q
    ||    
T  22184587 ct 22184586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 364 - 514
Target Start/End: Original strand, 24189883 - 24190034
Alignment:
Q  364 tactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacct 462  Q
    ||||||||| ||||||||| | ||||||||||  ||||||||||||  || |||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  24189883 tactctgggggctaccaagccgggaaggaaattcactagtgtagtctttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacct 24189982  T
Q  463 acccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||  || || ||||||||||||| ||||||||||||| |||||||||    
T  24189983 acccgtatagacttcaacctaggaactcatagatctgagatcccatctcact 24190034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 314 - 460
Target Start/End: Complemental strand, 22131022 - 22130877
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgta 413  Q
    ||||||||  ||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||| |||||||| ||||||||| ||| ||    
T  22131022 aaagtaaaaagcacagagagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccagg-aggaaatccactagtgtaatcctta 22130924  T
Q  414 atcaatagctctcagcaaactcctcgtttgcactaatgacctaggac 460  Q
     ||  |||||||||||||||||||||||| |||||| ||||||||||    
T  22130923 ttctctagctctcagcaaactcctcgtttacactaaagacctaggac 22130877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 360 - 514
Target Start/End: Original strand, 26036827 - 26036981
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctagga 459  Q
    ||||||||||||| ||||||||| ||||||||||||| |||||||| |||| || || |||||||||||||||||| |||||| |||||| |||||||||    
T  26036827 cacctactctgggggctaccaagccaggaaggaaatccactagtgttgtccttattctatagctctcagcaaactcatcgtttacactaaagacctagga 26036926  T
Q  460 cctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||  || || ||||||||||||  ||||||||||||| ||| |||||    
T  26036927 cctacccgtatagacttcaacctaggaacttgtagatctgagatcccatttcact 26036981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 376 - 514
Target Start/End: Complemental strand, 22246478 - 22246339
Alignment:
Q  376 taccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgaa 474  Q
    ||||||| ||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||| |||||  ||||||||||||||||||||  ||     
T  22246478 taccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatttgacctaggacctacccgtatagac 22246379  T
Q  475 tttaacctaggaactcctagatctgagatctcatctcact 514  Q
    || ||||||||||||||||||||  ||||| |||||||||    
T  22246378 ttcaacctaggaactcctagatcatagatcacatctcact 22246339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 360 - 514
Target Start/End: Complemental strand, 23420704 - 23420549
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctagg 458  Q
    ||||||||||  | |||||||||  |||||||||||| ||||||||||||| || |||||||||||||||||||||||| ||| ||||| ||||||||||    
T  23420704 cacctactctaagggctaccaagctaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcatttacactatatgacctagg 23420605  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||||  || || ||||||||||||  ||||||||||||| |||||||||    
T  23420604 acctacccgtatagacttcaacctaggaactgttagatctgagatcccatctcact 23420549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 360 - 515
Target Start/End: Original strand, 23623894 - 23624049
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctagga 459  Q
    ||||||||||||| ||||| ||   |||||||||||| ||||||||||||  || || ||||||||||||||||||||| ||| ||||||  ||||||||    
T  23623894 cacctactctgggggctactaacctaggaaggaaatccactagtgtagtcgttattctatagctctcagcaaactcctcatttacactaaatacctagga 23623993  T
Q  460 cctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcactt 515  Q
    |||||||||| ||| || ||||||||||||| ||||| ||||||||||||||||||    
T  23623994 cctacccgtattgatttcaacctaggaactcttagatttgagatctcatctcactt 23624049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 360 - 514
Target Start/End: Original strand, 18221127 - 18221281
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctagga 459  Q
    |||||||| ||||  |||||||| || |||||||||| ||||||||||||| || || |||||||||| |||||| ||||||| |||||| |||||||||    
T  18221127 cacctactttggggtctaccaagccaagaaggaaatccactagtgtagtccttattccatagctctcaccaaacttctcgtttacactaaagacctagga 18221226  T
Q  460 cctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
     ||||| ||| ||| || ||||||||||||||||||||||||||| |||||||||    
T  18221227 gctaccagtattgagttcaacctaggaactcctagatctgagatcccatctcact 18221281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 314 - 512
Target Start/End: Complemental strand, 13942187 - 13941987
Alignment:
Q  314 aaagtaaatggcacat-agagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccg 411  Q
    |||||||||||||||| |||||| ||||||  ||||||||| |||   ||||||||||||| ||||||||||||||||||||||| |||||||||||||     
T  13942187 aaagtaaatggcacatgagagtt-gttaacctagttcggtgacaaacacacctactctgggggctaccaagtcaggaaggaaatccactagtgtagtcct 13942089  T
Q  412 taatcaatagctctcagcaaactcctcgtttgc-actaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatct 510  Q
    || || | || |||||||||||||||||||| | ||| |  |||||||||||||||||    | || ||||||||||||||||||||||||||| |||||    
T  13942088 tattctaaagttctcagcaaactcctcgtttacaacttaaaacctaggacctacccgtctacacttcaacctaggaactcctagatctgagatcccatct 13941989  T
Q  511 ca 512  Q
    ||    
T  13941988 ca 13941987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 360 - 514
Target Start/End: Complemental strand, 20714879 - 20714724
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctagg 458  Q
    ||||||||||| | |||||||||||||| |||||||| ||||||||||||| || || |  | |||||||||||||||||||| ||  | | ||||||||    
T  20714879 cacctactctgagggctaccaagtcaggtaggaaatccactagtgtagtccttattctaatgttctcagcaaactcctcgtttacaacacaagacctagg 20714780  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||| ||| || |||||||||||||||||||||||||| ||||||||||    
T  20714779 acctacccgtattgatttcaacctaggaactcctagatctgagatttcatctcact 20714724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 360 - 469
Target Start/End: Complemental strand, 25105563 - 25105453
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctagg 458  Q
    ||||||| || || ||||||||||||||||||||||| ||||||||||||| || ||||||||| |||||||||||||||||| ||||| ||||||||||    
T  25105563 cacctacactaggggctaccaagtcaggaaggaaatccactagtgtagtccttattcaatagctttcagcaaactcctcgtttacactatatgacctagg 25105464  T
Q  459 acctacccgta 469  Q
    |||||||||||    
T  25105463 acctacccgta 25105453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 360 - 469
Target Start/End: Complemental strand, 25164656 - 25164546
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctagg 458  Q
    ||||||| || || ||||||||||||||||||||||| ||||||||||||| || ||||||||| |||||||||||||||||| ||||| ||||||||||    
T  25164656 cacctacactaggggctaccaagtcaggaaggaaatccactagtgtagtccttattcaatagctttcagcaaactcctcgtttacactatatgacctagg 25164557  T
Q  459 acctacccgta 469  Q
    |||||||||||    
T  25164556 acctacccgta 25164546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 384 - 504
Target Start/End: Complemental strand, 22252160 - 22252039
Alignment:
Q  384 caggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaacct 482  Q
    ||||||||||||| ||||||||||||| || ||||||||||||| |||||||||| ||| ||||| |||||||||||||||||||||  || || |||||    
T  22252160 caggaaggaaatccactagtgtagtccttattcaatagctctcaacaaactcctcatttacactatatgacctaggacctacccgtatagacttcaacct 22252061  T
Q  483 aggaactcctagatctgagatc 504  Q
    |||||||||||||||| |||||    
T  22252060 aggaactcctagatcttagatc 22252039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 334 - 520
Target Start/End: Original strand, 11204712 - 11204896
Alignment:
Q  334 tttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaa-tagctctcagcaaa 432  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||  ||||  |||| ||||  |||||||||||||    
T  11204712 tttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccacta--gtagatcgtattcaacaagctctcagcaaa 11204809  T
Q  433 ctcctcgtttgcac-taatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcctta 520  Q
      || ||||||||| | |||||||||   ||||||||| ||| || | |||| |||||||||||  |||||||||||| ||||||||||    
T  11204810 --ccacgtttgcacttgatgacctagactctacccgtaatgacttcagcctaagaactcctagacttgagatctcatcccacttcctta 11204896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 331 - 517
Target Start/End: Complemental strand, 17661583 - 17661396
Alignment:
Q  331 gagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagc 429  Q
    |||||||||||| |||||||||| |||   |||||||| |||| ||||||||| | ||||||||||  |||||||| |||| |  || | || |||||||    
T  17661583 gagtttgttaacccagttcggtgacaaacacacctactatgggggctaccaagcctggaaggaaattcactagtgttgtccttgttcta-agttctcagc 17661485  T
Q  430 aaactcctcgtttgca-ctaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    ||| |||   ||  || || || ||||||||||||||| || ||| || ||||||||||||||||||||||||||  ||||||||||||    
T  17661484 aaattccaaattcacaacttataacctaggacctacccatattgacttcaacctaggaactcctagatctgagattccatctcacttcc 17661396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 333 - 517
Target Start/End: Original strand, 9522525 - 9522708
Alignment:
Q  333 gtttgttaactcagttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaa 431  Q
    |||||||||| ||||||||  |||| |||| ||| | |||| |||||||||||| |||||||||  ||||||||||||| || || | || | ||| |||    
T  9522525 gtttgttaacccagttcggcacaac-tcacttacatttgggggctaccaagtcaagaaggaaattcactagtgtagtccttattcta-agttatcaacaa 9522622  T
Q  432 actcctcgtttgcactaatgacctaggacctacccgtac----tgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    ||||||| ||| ||     |||||||||||||||||||     ||| || ||||||||||||||||||||||||||| ||||||||||||    
T  9522623 actcctcttttacaa----gacctaggacctacccgtatatattgacttcaacctaggaactcctagatctgagatcccatctcacttcc 9522708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 451 - 517
Target Start/End: Original strand, 24117703 - 24117769
Alignment:
Q  451 gacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    ||||||||||||||||||| ||| ||||||||||||| | || ||||||||||| ||||||||||||    
T  24117703 gacctaggacctacccgtattgactttaacctaggaatttcttgatctgagatcccatctcacttcc 24117769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 464 - 517
Target Start/End: Original strand, 22979867 - 22979920
Alignment:
Q  464 cccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    |||||| ||| || ||||||||||||| ||||||||||||||||||||||||||    
T  22979867 cccgtattgacttcaacctaggaactcttagatctgagatctcatctcacttcc 22979920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 395
Target Start/End: Original strand, 15116782 - 15116844
Alignment:
Q  334 tttgttaactcagttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaat 395  Q
    |||||| || |||||| ||||||| |||||||| |||||| ||||||||||||||||||||||    
T  15116782 tttgttgacccagttcagtgcaacctcacctacgtctgggggctaccaagtcaggaaggaaat 15116844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 451 - 517
Target Start/End: Complemental strand, 11756256 - 11756193
Alignment:
Q  451 gacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    ||||||||||||||||||| ||| || ||||||||||||| ||||||   |||| ||||||||||||    
T  11756256 gacctaggacctacccgtattgacttcaacctaggaactcttagatc---gatcccatctcacttcc 11756193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 401
Target Start/End: Original strand, 24394622 - 24394690
Alignment:
Q  334 tttgttaactcagttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaatcaacta 401  Q
    ||||||||| || |||||||||||||||||||| |||||| ||  ||||| ||||||||||||| ||||    
T  24394622 tttgttaacccatttcggtgcaacgtcacctacatctgggggcatccaagccaggaaggaaatccacta 24394690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 478 - 514
Target Start/End: Complemental strand, 9422541 - 9422505
Alignment:
Q  478 aacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||| |||||||||||||||||||| |||||||||    
T  9422541 aacctatgaactcctagatctgagatcccatctcact 9422505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 478 - 514
Target Start/End: Complemental strand, 22130873 - 22130837
Alignment:
Q  478 aacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  22130873 aacctagaaactcctagatctgagatcccatctcact 22130837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 362 - 410
Target Start/End: Original strand, 24117614 - 24117662
Alignment:
Q  362 cctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtcc 410  Q
    ||||||||||  ||||||||| |||||| |||||| |||||||||||||    
T  24117614 cctactctggtggctaccaagccaggaatgaaatccactagtgtagtcc 24117662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 230; Significance: 1e-127; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 188 - 547
Target Start/End: Complemental strand, 9031696 - 9031336
Alignment:
Q  188 ctgaaattctggcacgttagacttaagatgttctataagat-tttcaacacaagttatacagaaacagatgttgaatgaaatgtttcgaacactaagcta 286  Q
    ||||||||||||||||||||||||||||||||| |||  || ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  9031696 ctgaaattctggcacgttagacttaagatgttccatacaatgtttcaacacaagttatacaaaaacagatgttgagtgaaatgtttcgaacactaagcta 9031597  T
Q  287 acaaaagacaagtaaaacacaaa-cataaaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtca 385  Q
    ||||| |||||| ||||| |||| ||||||||||||  |||||  |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  9031596 acaaa-gacaagaaaaacgcaaagcataaaagtaaaaagcacaatgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagtca 9031498  T
Q  386 ggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctagg 485  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| || ||||||||    
T  9031497 ggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttgtgctaatgacctaggacctacccgtactgacttcaacctagg 9031398  T
Q  486 aactcctagatctgagatctcatctcacttccttacaactgatcatagcccctatgcttctc 547  Q
    ||||||||||||||||||| ||||||||| |||||||| |||||| | ||||| || |||||    
T  9031397 aactcctagatctgagatcccatctcactcccttacaattgatcacatcccctgtgattctc 9031336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 189 - 547
Target Start/End: Original strand, 9036552 - 9036911
Alignment:
Q  189 tgaaattctggcacgttagacttaagatgttctataagat-tttcaacacaagttatacagaaacagatgttgaatgaaatgtttcgaacactaagctaa 287  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||    
T  9036552 tgaaattctggcacgttagacttaagatgttctatacgatgtttcaacacaagttatacaaaatcagatgttgagtgaaatgtttcgaacactaagctaa 9036651  T
Q  288 caaaagacaagtaaaacacaaa-cataaaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcag 386  Q
     ||| |||||| ||||  |||| |||||||||  | ||||||  || ||||||||| |||||||||||||| |||| ||||||||| ||||||||  |||    
T  9036652 taaa-gacaagaaaaatgcaaagcataaaagtggaaggcacagtgaatttgttaacccagttcggtgcaacatcacatactctgggggctaccaaaccag 9036750  T
Q  387 gaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctagga 486  Q
    |||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| || |||||||||    
T  9036751 gaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttgcactaaagacctaggacctacccgtattgacttcaacctagga 9036850  T
Q  487 actcctagatctgagatctcatctcacttccttacaactgatcatagcccctatgcttctc 547  Q
    |||||||||||||||||| ||||||||| |||||||| |||||| | ||||| || |||||    
T  9036851 actcctagatctgagatcccatctcactcccttacaattgatcacaacccctgtgattctc 9036911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 189 - 547
Target Start/End: Original strand, 8748884 - 8749243
Alignment:
Q  189 tgaaattctggcacgttagacttaagatgttctataagat-tttcaacacaagttatacagaaacagatgttgaatgaaatgtttcgaacactaagctaa 287  Q
    |||||||||||||| ||||||||| ||||||||||| ||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  8748884 tgaaattctggcacattagacttacgatgttctatacgatgtttcaacacaagttatacagaaacaaatgttgaataaaatgtttcgaacactaagctaa 8748983  T
Q  288 caaaagacaagtaaaacacaaa-cataaaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcag 386  Q
    || |||| ||| ||||  |||| |||||| ||||| |||| |  |||||||||||| || ||| ||||||||| | ||||||||||  ||||||||  ||    
T  8748984 cacaagaaaagaaaaatgcaaagcataaa-gtaaagggcatagtgagtttgttaacccaattcagtgcaacgttagctactctggggactaccaagctag 8749082  T
Q  387 gaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctagga 486  Q
    |||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| | || |||||||||    
T  8749083 gaaggaaatccactagtgtagtccgtattcaatagctctcagcaagctcctcgtttgcactaatgacctaggatctacccgtactaacttcaacctagga 8749182  T
Q  487 actcctagatctgagatctcatctcacttccttacaactgatcatagcccctatgcttctc 547  Q
    |||||||||||||||||||||||||||| ||||||||||||||| | ||||| || |||||    
T  8749183 actcctagatctgagatctcatctcactcccttacaactgatcacaacccctgtgattctc 8749243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 331 - 514
Target Start/End: Original strand, 295447 - 295631
Alignment:
Q  331 gagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagc 429  Q
    ||||||||| || |||||||||| |||   ||||||||||||| ||||||||| ||||||||||||| ||||||||||||| || || ||||||||||||    
T  295447 gagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattctatagctctcagc 295546  T
Q  430 aaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||||| |||||| ||||||||||||||||||| ||| || ||| ||||||||||||||||||||||| |||||||||    
T  295547 aaactcctcgtttacactaaagacctaggacctacccgtattgatttcaacttaggaactcctagatctgagatcccatctcact 295631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 331 - 514
Target Start/End: Original strand, 17702393 - 17702578
Alignment:
Q  331 gagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagc 429  Q
    ||||||||| || |||||||||| |||   || |||||||||| ||||||||| ||||||||||||| ||||||||||||| || |||||||||||||||    
T  17702393 gagtttgttgacccagttcggtgacaaacacaactactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagc 17702492  T
Q  430 aaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||||| ||||| |||||||||||||||||||||  || || ||||||||||||||||||||||||||| |||||||||    
T  17702493 aaactcctcgtttacactatatgacctaggacctacccgtatagacttaaacctaggaactcctagatctgagatcccatctcact 17702578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 314 - 514
Target Start/End: Complemental strand, 18064394 - 18064193
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgt 412  Q
    |||||||| | ||||  |||||||||||| |||||||||| |||   |||||||||| |  ||||||||| ||||||||||||| ||||||||||||| |    
T  18064394 aaagtaaaagacacaatgagtttgttaacccagttcggtgacaaacacacctactctagaggctaccaaggcaggaaggaaatccactagtgtagtcctt 18064295  T
Q  413 aatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctca 512  Q
    | || |||||||||| |||||||||||||| |||||| ||||||||||||| ||||| ||| || |||||||||||||||||||||||||||||||||||    
T  18064294 attctatagctctcaacaaactcctcgtttacactaaagacctaggacctaaccgtattgatttcaacctaggaactcctagatctgagatctcatctca 18064195  T
Q  513 ct 514  Q
    ||    
T  18064194 ct 18064193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 315 - 514
Target Start/End: Complemental strand, 6581054 - 6580854
Alignment:
Q  315 aagtaaatggcacatagagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgta 413  Q
    ||||||| ||||||   ||||||||||| |||||||||| |||   |||||||||||   ||||||||| ||| ||||||||| ||||||||||||| ||    
T  6581054 aagtaaaaggcacaacaagtttgttaacccagttcggtgacaaacacacctactctgaaggctaccaagccagcaaggaaatccactagtgtagtcctta 6580955  T
Q  414 atcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcac 513  Q
     || ||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||| || ||||||||||||||||||||||||||| ||||||||    
T  6580954 ttctatagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtattgatttcaacctaggaactcctagatctgagatcccatctcac 6580855  T
Q  514 t 514  Q
    |    
T  6580854 t 6580854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 313 - 509
Target Start/End: Complemental strand, 7496116 - 7495921
Alignment:
Q  313 aaaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgt 412  Q
    |||||||||  ||||| |||||||||||||||||||||||||||| || |||| | |||| |||| |||| ||||| ||||||| ||||||||||||| |    
T  7496116 aaaagtaaaaagcacaaagagtttgttaactcagttcggtgcaacatcgcctaatttgggggctatcaagccagga-ggaaatccactagtgtagtcctt 7496018  T
Q  413 aatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatc 509  Q
    | ||  |||||||||||||||||||||||| |||||| |||||||||||||||| || ||| || ||||||||||||||||||||||||||| ||||    
T  7496017 attctctagctctcagcaaactcctcgtttacactaaagacctaggacctacccatattgacttcaacctaggaactcctagatctgagatcccatc 7495921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 324 - 511
Target Start/End: Complemental strand, 7479314 - 7479128
Alignment:
Q  324 gcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagct 423  Q
    ||||| ||||||||||||||||||||||||||||||| |||| |||||| ||||||||| ||||| ||||||| ||||||||||||| || ||  |||||    
T  7479314 gcacaaagagtttgttaactcagttcggtgcaacgtcgcctaatctgggggctaccaagccagga-ggaaatccactagtgtagtccttattctctagct 7479216  T
Q  424 ctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctc 511  Q
    ||||||||||||||||||| |||||| |||||||||||||||| || ||| || ||| || ||| |||||||||||||||| ||||||    
T  7479215 ctcagcaaactcctcgtttacactaaagacctaggacctacccatattgacttcaacatatgaagtcctagatctgagatcccatctc 7479128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 325 - 514
Target Start/End: Original strand, 13913773 - 13913961
Alignment:
Q  325 cacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctc 424  Q
    |||| ||||||||||||| | ||||||||||||||||||||||||||| ||||||||| ||||| |||||||  |||||||| ||| || ||  ||||||    
T  13913773 cacagagagtttgttaacccggttcggtgcaacgtcacctactctgggggctaccaagccagga-ggaaatccgctagtgtactccttattctctagctc 13913871  T
Q  425 tcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||||||||||| |||||| ||||||||| ||||||||  | | || |||||||||||||||||||||||||| ||||||||||    
T  13913872 tcagcaaactcctcgtttacactaaagacctaggatctacccgttttaacttcaacctaggaactcctagatctgagatttcatctcact 13913961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 325 - 514
Target Start/End: Original strand, 13917825 - 13918013
Alignment:
Q  325 cacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctc 424  Q
    |||| ||||||||||||| || |||||||||||||||||||||||||| ||||||||| ||| ||||||||| | ||||||| ||| || ||  ||||||    
T  13917825 cacagagagtttgttaacccaattcggtgcaacgtcacctactctgggggctaccaagccag-aaggaaatccaatagtgtactccttattctctagctc 13917923  T
Q  425 tcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||| ||||||||| |||||| ||||||||||||||| || |||| || ||||||||||||||||||| |||||| ||||||||||    
T  13917924 tcagcaaattcctcgtttacactaaagacctaggacctacctgtcctgacttcaacctaggaactcctagatatgagatttcatctcact 13918013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 360 - 514
Target Start/End: Original strand, 28051153 - 28051307
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctagga 459  Q
    ||||||||||||| ||||||||| ||||||||||||| | ||||||||||| || || ||||||||||||||||||||||||| |||||| | |||||||    
T  28051153 cacctactctgggggctaccaagccaggaaggaaatccaatagtgtagtccttattctatagctctcagcaaactcctcgtttacactaaaggcctagga 28051252  T
Q  460 cctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    | |||| ||| ||| || |||||||||||||||||||||||||||||||||||||    
T  28051253 catacctgtattgatttcaacctaggaactcctagatctgagatctcatctcact 28051307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 331 - 514
Target Start/End: Original strand, 13790666 - 13790851
Alignment:
Q  331 gagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagc 429  Q
    ||||||||| || |||||||||| |||   |||||||| |||| ||||||||| || |||||||||  ||||||||||||| || |||||||||||||||    
T  13790666 gagtttgttgacccagttcggtgacaaacacacctactatgggggctaccaagccaagaaggaaatatactagtgtagtccttattcaatagctctcagc 13790765  T
Q  430 aaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||||| ||||| |||||||||||||||||||||  || || ||||||||||||||||||||||||||| |||||||||    
T  13790766 aaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcact 13790851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 360 - 514
Target Start/End: Complemental strand, 17042895 - 17042741
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctagga 459  Q
    ||||||||||||  ||||||||| ||||||||||||| ||||||||||||| || || |||||||||| ||||||||||||||  ||||| |||||||||    
T  17042895 cacctactctggaggctaccaaggcaggaaggaaatccactagtgtagtccttattctatagctctcaacaaactcctcgtttaaactaaagacctagga 17042796  T
Q  460 cctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||| ||| || |||| |||||||||||||||||||||| |||||||||    
T  17042795 cctacccgtattgatttcaacccaggaactcctagatctgagatcccatctcact 17042741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 314 - 514
Target Start/End: Complemental strand, 18035084 - 18034883
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgt 412  Q
    |||||||| | ||||  |||||||||||| |||||||||| |||   |||||||||| |  ||||||||| ||||||||||||| ||||||||||||| |    
T  18035084 aaagtaaaagacacaatgagtttgttaacccagttcggtgacaaacacacctactcttgaggctaccaagccaggaaggaaatccactagtgtagtcctt 18034985  T
Q  413 aatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctca 512  Q
    | || |||| |||||||||||||||| ||| ||| || |||||||||||||||||||   | || ||||||||||||||||||||||||||| |||||||    
T  18034984 attctataggtctcagcaaactcctcatttacaccaaagacctaggacctacccgtatctatttcaacctaggaactcctagatctgagatcccatctca 18034885  T
Q  513 ct 514  Q
    ||    
T  18034884 ct 18034883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 332 - 514
Target Start/End: Original strand, 11656010 - 11656193
Alignment:
Q  332 agtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaa 431  Q
    ||||||||||| ||||| ||||||| ||||||||||||||  |||||||||||||||| |||||  ||||||||||||| ||  ||| ||||||||||||    
T  11656010 agtttgttaacccagtttggtgcaatgtcacctactctggaggctaccaagtcaggaaagaaattcactagtgtagtccttatccaaaagctctcagcaa 11656109  T
Q  432 actcctcgtttgcac-taatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||| ||| | |||||||||||||| ||||||  |  || ||||||||||||||||||| |||| || |||||||||    
T  11656110 actcctcgtttacactttatgacctaggacctgcccgtatagccttcaacctaggaactcctagatttgagttcccatctcact 11656193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 360 - 514
Target Start/End: Original strand, 24195541 - 24195695
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctagg 458  Q
    ||||||||||||| ||||||||| || |||||||||| ||||||||||||| || |||||||||||||||||||||||| ||| ||||| ||||||||||    
T  24195541 cacctactctggg-gctaccaagccaagaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcatttacactatatgacctagg 24195639  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    | ||||| |||  || || ||||||||||||||||||||||||||| |||||||||    
T  24195640 agctacctgtatagacttcaacctaggaactcctagatctgagatcccatctcact 24195695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 331 - 514
Target Start/End: Complemental strand, 20748334 - 20748151
Alignment:
Q  331 gagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagca 430  Q
    |||||||||||| |||||||||||||| ||||||||| |||| ||||||||| ||||||||||||| ||||||||||||| || | || |||||||| ||    
T  20748334 gagtttgttaacccagttcggtgcaacatcacctactttggg-gctaccaagccaggaaggaaatccactagtgtagtccttattgaaaagctctcaaca 20748236  T
Q  431 aactcctcgtttgcac-taatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||| |||||| ||| | |||||||||||||||||  |   || || ||||||| |||||||||||||||||||||| ||||||    
T  20748235 aactcatcgtttacactttatgacctaggacctaccaatctagacttcaacctagaaactcctagatctgagatctcaactcact 20748151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 360 - 514
Target Start/End: Complemental strand, 15636015 - 15635860
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctagg 458  Q
    ||||||||||||| ||||||||| ||||||||||||  ||||||||||||| || |||||||||||||| ||||||||||||| ||||| |||| |||||    
T  15636015 cacctactctgggggctaccaagccaggaaggaaattcactagtgtagtccttattcaatagctctcagtaaactcctcgtttacactatatgatctagg 15635916  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||||  || || || |||||||||||||||| ||||||| |||| ||||    
T  15635915 acctacccgtatagacttcaaactaggaactcctagatatgagatcccatcacact 15635860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 324 - 514
Target Start/End: Complemental strand, 11558496 - 11558311
Alignment:
Q  324 gcacatagagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagc 422  Q
    ||||| |||||||||||||  ||||||||| ||||  |||||||| |||  ||||||||| ||||||||||||| ||||||||| |||||| |||| |||    
T  11558496 gcacagagagtttgttaaccaagttcggtgacaaca-cacctactatggaggctaccaagccaggaaggaaatccactagtgtaatccgtattcaaaagc 11558398  T
Q  423 tctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    | ||||||||  || ||||||||||||||||||||||||||||   ||||| || ||||||||||||||||||| ||||||| |||||||||    
T  11558397 tttcagcaaa--ccacgtttgcactaatgacctaggacctacc---actgatttcaacctaggaactcctagatttgagatcccatctcact 11558311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 324 - 514
Target Start/End: Complemental strand, 11567765 - 11567580
Alignment:
Q  324 gcacatagagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagc 422  Q
    ||||| |||||||||||||  ||||||||| ||||  |||||||| |||  ||||||||| ||||||||||||| ||||||||| |||||| |||| |||    
T  11567765 gcacagagagtttgttaaccaagttcggtgacaaca-cacctactatggaggctaccaagccaggaaggaaatccactagtgtaatccgtattcaaaagc 11567667  T
Q  423 tctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    | ||||||||  || ||||||||||||||||||||||||||||   ||||| || ||||||||||||||||||| ||||||| |||||||||    
T  11567666 tttcagcaaa--ccacgtttgcactaatgacctaggacctacc---actgatttcaacctaggaactcctagatttgagatcccatctcact 11567580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 314 - 514
Target Start/End: Original strand, 8224810 - 8225007
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgt 412  Q
    |||||||| |||||| | ||||||||||| ||||| ||   ||| |||||||| |||||| ||||||||| ||||||||||||| ||||||||||||| |    
T  8224810 aaagtaaaaggcacacaaagtttgttaacccagtttggcaaaac-tcacctacatctgggggctaccaagccaggaaggaaatccactagtgtagtcctt 8224908  T
Q  413 aatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctc 511  Q
    | |||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||  |  || ||||||||||||||    ||||||||| ||||||    
T  8224909 attcaatagctctcagcaaactcctcgtttacactatatgacctaagacctacccgtatagtcttcaacctaggaactcc----tctgagatcccatctc 8225004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 314 - 514
Target Start/End: Original strand, 18476901 - 18477100
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgt 412  Q
    |||||||| |||||| ||||||||||||| ||||||||  |||| |||||||| |||||| ||||||||| ||||||||||||| ||||||||||||| |    
T  18476901 aaagtaaaaggcacaaagagtttgttaacccagttcggcacaac-tcacctacatctggg-gctaccaagccaggaaggaaatccactagtgtagtcctt 18476998  T
Q  413 aatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctca 512  Q
    | || | ||||||||||||||||||||||| |||| | ||| || ||||||| ||||  || || || |||||||||||||||| ||||||| || ||||    
T  18476999 attctaaagctctcagcaaactcctcgtttacacttaagacataagacctactcgtatagacttcaaactaggaactcctagatttgagatcccacctca 18477098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 360 - 510
Target Start/End: Original strand, 18547665 - 18547816
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctagg 458  Q
    ||||||||||||| ||||||||| ||||||||||||| | ||||||||||| || |||||||||||  ||||||||||||||| ||||| |||||||| |    
T  18547665 cacctactctgggggctaccaagccaggaaggaaatccaatagtgtagtccttattcaatagctcttggcaaactcctcgtttacactatatgacctaag 18547764  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatct 510  Q
    |||||||||||  || || ||||||||||||| ||||||| ||||| |||||    
T  18547765 acctacccgtatagacttcaacctaggaactcatagatctaagatcccatct 18547816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 360 - 514
Target Start/End: Complemental strand, 23954699 - 23954544
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctagg 458  Q
    ||||||||||||  ||||||||| ||||||||||||| | |||| |||||  || |||||||||||||||||||||||||||| ||||| ||||||||||    
T  23954699 cacctactctggaggctaccaagccaggaaggaaatccattagtttagtcattattcaatagctctcagcaaactcctcgtttacactatatgacctagg 23954600  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||| |||   | || ||||||||||||||||||| ||||||| |||||||||    
T  23954599 acctacctgtatatacttcaacctaggaactcctagatttgagatcccatctcact 23954544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 378 - 512
Target Start/End: Original strand, 44452515 - 44452650
Alignment:
Q  378 ccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgaatt 476  Q
    ||||| ||||||||||||| ||||||||||| | || |||||||||||||||||||||||||||| ||||| |||||| | ||||||||||||  || ||    
T  44452515 ccaagccaggaaggaaatccactagtgtagttcttattcaatagctctcagcaaactcctcgtttacactatatgacccatgacctacccgtatagactt 44452614  T
Q  477 taacctaggaactcctagatctgagatctcatctca 512  Q
     ||||||||||||||||||||||||||| |||||||    
T  44452615 caacctaggaactcctagatctgagatcccatctca 44452650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 314 - 496
Target Start/End: Complemental strand, 12054635 - 12054454
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgta 413  Q
    |||||||||||||||  |||||| ||||| ||||||||||||| |||||||||||| || | |||||||   ||| ||||||| || |||||||||| ||    
T  12054635 aaagtaaatggcacagtgagtttcttaacccagttcggtgcaatgtcacctactctaggggataccaagctcgga-ggaaatctacaagtgtagtcctta 12054537  T
Q  414 atcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagat 496  Q
     ||  |||||||||||||||||||||||| |||||| ||||| ||||||||| ||  ||| || ||||||| |||||||||||    
T  12054536 ttctctagctctcagcaaactcctcgtttacactaaagaccttggacctacctgtcttgacttcaacctagaaactcctagat 12054454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 374 - 514
Target Start/End: Complemental strand, 21719053 - 21718913
Alignment:
Q  374 gctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactga 473  Q
    ||||||||| ||||||||||||| ||||||||||||| || || | || | ||| |||| ||||||||| |||| | ||||||||| ||||||||   ||    
T  21719053 gctaccaagccaggaaggaaatccactagtgtagtccttattctaaagttttcaacaaaatcctcgtttacacttaagacctaggatctacccgtctaga 21718954  T
Q  474 atttaacctaggaactcctagatctgagatctcatctcact 514  Q
     ||||||||||||||||||||||||||||||||||||||||    
T  21718953 ctttaacctaggaactcctagatctgagatctcatctcact 21718913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 374 - 492
Target Start/End: Original strand, 19633917 - 19634035
Alignment:
Q  374 gctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactga 473  Q
    ||||||||| ||||||||||||| ||||||||||||| || || ||||||||||||||||||||||||| |||||| ||  |||||||||||||||  ||    
T  19633917 gctaccaagccaggaaggaaatccactagtgtagtccttattctatagctctcagcaaactcctcgtttacactaaagatataggacctacccgtataga 19634016  T
Q  474 atttaacctaggaactcct 492  Q
     || |||||| ||||||||    
T  19634017 cttcaacctaagaactcct 19634035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 360 - 469
Target Start/End: Complemental strand, 13524823 - 13524714
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctagga 459  Q
    ||||||||||||| |||||||||||| |||||||||| ||| ||||||||| || || |||| |||||||||||||||| ||| |||||| ||||||| |    
T  13524823 cacctactctgggggctaccaagtcaagaaggaaatccactggtgtagtccttattctatagttctcagcaaactcctcatttacactaaagacctagta 13524724  T
Q  460 cctacccgta 469  Q
    |||| |||||    
T  13524723 cctatccgta 13524714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 360 - 517
Target Start/End: Original strand, 31649708 - 31649863
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgca-ctaatgacctagg 458  Q
    |||||||||||||  |||||||| ||||||||||||| ||| ||||||||| || ||  ||| |||||||||||||||||||| || ||   ||||||||    
T  31649708 cacctactctgggt-ctaccaagccaggaaggaaatccactcgtgtagtccttattc--tagttctcagcaaactcctcgtttacaactctagacctagg 31649804  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    ||||||||||  ||| || ||||||| || ||||| |||||||||| ||||||||||||    
T  31649805 acctacccgtcttgacttcaacctagaaaatcctatatctgagatcccatctcacttcc 31649863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 360 - 541
Target Start/End: Complemental strand, 21094842 - 21094662
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgca-ctaatgacctagg 458  Q
    ||||||||||||| ||||||||||||||||||||||  ||||||||||||| || || | || |||||| ||||  | ||||| || || | ||||||||    
T  21094842 cacctactctggg-gctaccaagtcaggaaggaaattcactagtgtagtccttattctaaagttctcagtaaac--cacgtttacaacttaagacctagg 21094746  T
Q  459 acctacccgtactgaattt-aacctaggaactcctagatctgagatctcatctcacttccttacaactgatcatagcccctatg 541  Q
    ||||||||||   ||| || ||||||||||||||||||||||||||| | |||||||  | ||||| | |||| ||||||||||    
T  21094745 acctacccgtctagaacttcaacctaggaactcctagatctgagatcccgtctcactatcctacaattaatcacagcccctatg 21094662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 323 - 514
Target Start/End: Complemental strand, 15686337 - 15686146
Alignment:
Q  323 ggcacatagagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatag 421  Q
    ||||||||||||||||| || ||||||| || |||   |||||||||| || ||||||||| ||||||||||||| | ||||||||||| || || | ||    
T  15686337 ggcacatagagtttgttgacccagttcgatgacaaacacacctactctaggggctaccaagccaggaaggaaatccattagtgtagtccttattctaaag 15686238  T
Q  422 ctctcagcaaactcctcgtttgc-actaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
     ||||||||||  || ||||| | ||| | |||||| |||||||| ||   || || |||| |||||||||||||||||||||| |||||||||    
T  15686237 ttctcagcaaa--ccacgtttacaacttaagacctatgacctacctgtctagacttcaacccaggaactcctagatctgagatcccatctcact 15686146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 429 - 514
Target Start/End: Complemental strand, 18483444 - 18483358
Alignment:
Q  429 caaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||||||| ||||| |||||||||||||||||||||  || || ||||||||||| ||| ||||||||||| |||||||||    
T  18483444 caaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaacacctggatctgagatcccatctcact 18483358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 360 - 514
Target Start/End: Complemental strand, 1919377 - 1919230
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctagga 459  Q
    |||||||| |||| ||||||||| || |||||||||| |||  |||||||| || ||||||||| ||||||||||| |||||| |||||      || ||    
T  1919377 cacctactatggg-gctaccaagccaagaaggaaatccactgatgtagtccttattcaatagctttcagcaaactcttcgtttacacta------tatga 1919285  T
Q  460 cctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||  |  || |||||||||||||||| || ||||||| |||||||||    
T  1919284 cctacccgtatagttttcaacctaggaactcctaaatatgagatcccatctcact 1919230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 360 - 435
Target Start/End: Complemental strand, 19532025 - 19531950
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactc 435  Q
    |||||||| |||| ||||||||| ||||||||||||| |||||||| |||| || |||||||||||||| ||||||    
T  19532025 cacctactttgggggctaccaagccaggaaggaaatccactagtgtcgtccttattcaatagctctcagaaaactc 19531950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 451 - 517
Target Start/End: Complemental strand, 215396 - 215330
Alignment:
Q  451 gacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    ||||||| ||||||||||| ||| || |||||||||||| |||||| ||||||||||||||||||||    
T  215396 gacctagaacctacccgtattgacttcaacctaggaacttctagatatgagatctcatctcacttcc 215330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 398 - 510
Target Start/End: Complemental strand, 21254097 - 21253984
Alignment:
Q  398 actagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgca-ctaatgacctaggacctacccgtactgaatttaacctaggaactcctagat 496  Q
    ||||||||||||| || || |||| ||||| |||||||||||||  || |||| ||||||||||||||| ||   || || ||||||||||||  |||||    
T  21254097 actagtgtagtccttattctatagttctcaacaaactcctcgttcacaactaaagacctaggacctacctgtctagacttcaacctaggaacttttagat 21253998  T
Q  497 ctgagatctcatct 510  Q
    ||||||||||||||    
T  21253997 ctgagatctcatct 21253984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 375 - 514
Target Start/End: Complemental strand, 287019 - 286879
Alignment:
Q  375 ctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactga 473  Q
    |||||||  ||||||||||||| |||||| |||||| || || |  | |||||| |||||||| ||||  |  | | ||||||||||||||||||   ||    
T  287019 ctaccaaaccaggaaggaaatccactagtatagtccttattctaatgttctcaggaaactccttgtttataacacaagacctaggacctacccgtctaga 286920  T
Q  474 atttaacctaggaactcctagatctgagatctcatctcact 514  Q
     || ||||||||||||||||||||||||||| |||||||||    
T  286919 tttcaacctaggaactcctagatctgagatcccatctcact 286879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 518
Target Start/End: Complemental strand, 3552355 - 3552198
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgc-actaatgacctagg 458  Q
    |||||||||| || ||||||||| ||||||| ||||| | ||||||||||| || || | || ||| | |||||||||||||| | |||   |||||| |    
T  3552355 cacctactcttggggctaccaagccaggaagaaaatccagtagtgtagtccttattcta-agttctaaacaaactcctcgtttacaactctagacctaag 3552257  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcct 518  Q
    |||||| |||  ||| || ||| ||||||||||| ||||||||||| |||||||||||||    
T  3552256 acctactcgtcttgacttcaacttaggaactccttgatctgagatc-catctcacttcct 3552198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 454 - 517
Target Start/End: Complemental strand, 14406676 - 14406613
Alignment:
Q  454 ctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    |||| |||||||||||||||  | |||||| |||||||||||||||||||| ||||||||||||    
T  14406676 ctagaacctacccgtactgacctcaacctaagaactcctagatctgagatcccatctcacttcc 14406613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 333 - 395
Target Start/End: Complemental strand, 10082443 - 10082380
Alignment:
Q  333 gtttgttaactcagttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaat 395  Q
    |||||||||| ||||||||||||||||||||||| ||| || |||||||||  |||||||||||    
T  10082443 gtttgttaacccagttcggtgcaacgtcacctacatctaggggctaccaagctaggaaggaaat 10082380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 475 - 514
Target Start/End: Complemental strand, 13515622 - 13515583
Alignment:
Q  475 tttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  13515622 tttaacctaggaactcctagatctgagatcccatctcact 13515583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 395
Target Start/End: Complemental strand, 10189368 - 10189305
Alignment:
Q  333 gtttgttaactcagttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaat 395  Q
    |||||||||| ||||||||||||||||||||||| | | || |||||||||  |||||||||||    
T  10189368 gtttgttaacccagttcggtgcaacgtcacctacatgtaggggctaccaagctaggaaggaaat 10189305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 454 - 517
Target Start/End: Complemental strand, 13100770 - 13100707
Alignment:
Q  454 ctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    |||||||||||||||  ||| || || ||||||||| ||||||||||||||  |||||||||||    
T  13100770 ctaggacctacccgtcttgacttcaatctaggaacttctagatctgagatcctatctcacttcc 13100707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 409
Target Start/End: Complemental strand, 3445146 - 3445098
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtc 409  Q
    ||||||||||| | |||| |||||||||||||||||| ||||||||||||    
T  3445146 cacctactctgag-gctatcaagtcaggaaggaaatccactagtgtagtc 3445098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 401
Target Start/End: Complemental strand, 20976147 - 20976090
Alignment:
Q  345 agttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaatcaacta 401  Q
    ||||||||||||| |||||||| |||||| ||||||||  ||||||||||||| ||||    
T  20976147 agttcggtgcaacttcacctacatctgggggctaccaaaccaggaaggaaatccacta 20976090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 366
Target Start/End: Original strand, 8531382 - 8531414
Alignment:
Q  334 tttgttaactcagttcggtgcaacgtcacctac 366  Q
    ||||||||| |||||||||||||||||||||||    
T  8531382 tttgttaacccagttcggtgcaacgtcacctac 8531414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 409
Target Start/End: Complemental strand, 14406818 - 14406722
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtc 409  Q
    |||||||| |||||||   |||||||||| |||||||||| |||   |||||||| || | ||||||||| ||||||||||||| || | |||||||    
T  14406818 aaagtaaaaggcacatgaggtttgttaacccagttcggtgacaaacacacctactttgtgggctaccaagccaggaaggaaatccaccaatgtagtc 14406722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 220; Significance: 1e-121; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 189 - 530
Target Start/End: Complemental strand, 45599643 - 45599301
Alignment:
Q  189 tgaaattctggcacgttagacttaagatgttctataagat-tttcaacacaagttatacagaaacagatgttgaatgaaatgtttcgaacactaagctaa 287  Q
    ||||||||||||||| |||||||| ||||||||||| ||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  45599643 tgaaattctggcacgatagacttacgatgttctatacgatgtttcaacacgagttatacagaaacagatgttgaataaaatgtttcgaacactaagctaa 45599544  T
Q  288 caaaagacaagtaaaacacaaa-cataaaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcag 386  Q
    || |||||||| ||||  |||| |||||| ||||| ||||||  ||||||||||||||| ||||||||||||||||||||||| || ||||||||| |||    
T  45599543 cacaagacaagaaaaatgcaaagcataaa-gtaaaaggcacagtgagtttgttaactcaattcggtgcaacgtcacctactctcggggctaccaagccag 45599445  T
Q  387 gaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctagga 486  Q
    |||||||||| |||| ||||||||||| ||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||| || |||||||||    
T  45599444 gaaggaaatccactaatgtagtccgtattcaatagttctcaacaaactcctcatttgcactaatgacctaggacctacccgtactgacttcaacctagga 45599345  T
Q  487 actcctagatctgagatctcatctcacttccttacaactgatca 530  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  45599344 actcctagatctgagatctcatctcactcccttacaactgatca 45599301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 188 - 547
Target Start/End: Complemental strand, 40313538 - 40313178
Alignment:
Q  188 ctgaaattctggcacgttagacttaagatgttctataagat-tttcaacacaagttatacagaaacagatgttgaatgaaatgtttcgaacactaagcta 286  Q
    ||||||||||||||||||||||||| ||||||||||  ||| |||||||| |||||||||||||| |||| || ||| |||| |||||||||  ||||||    
T  40313538 ctgaaattctggcacgttagacttacgatgttctatgcgatgtttcaacataagttatacagaaatagatattaaataaaatatttcgaacatgaagcta 40313439  T
Q  287 acaaaagacaagtaaaacacaaa-cataaaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtca 385  Q
    ||| |||||||| ||||  |||| |||||| |||||  |||||  |||||||||||| |||||| ||||||||| |||||||| ||| ||||||||| ||    
T  40313438 acacaagacaaggaaaatgcaaagcataaa-gtaaaatgcacagtgagtttgttaacccagttcagtgcaacgttacctactcagggggctaccaagcca 40313340  T
Q  386 ggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctagg 485  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||    
T  40313339 ggaaggaaatccactagtgtagtccgtattcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctagccgtactgacttcaacctagg 40313240  T
Q  486 aactcctagatctgagatctcatctcacttccttacaactgatcatagcccctatgcttctc 547  Q
    ||||| || |||||||||||||||||||| ||||||||||||||| | ||||| || |||||    
T  40313239 aactcatatatctgagatctcatctcactcccttacaactgatcacaacccctgtgattctc 40313178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 189 - 547
Target Start/End: Complemental strand, 52437135 - 52436774
Alignment:
Q  189 tgaaattctggcacgttagacttaagatgttctataagat-tttcaacacaagttatacagaaacagatgttgaatgaaatgtttcgaacactaagctaa 287  Q
    |||||||||||||||||||| |||  |||||||    ||| ||||||||| | ||| ||||||| ||||||||||  | |||||| ||||| ||||||||    
T  52437135 tgaaattctggcacgttagatttacaatgttcttcgcgatgtttcaacaccaattacacagaaatagatgttgaacaatatgtttggaacattaagctaa 52437036  T
Q  288 caaaagacaagtaaaacac-aaacataaaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcag 386  Q
    || |||||||||||||||  ||||| ||||||||| | ||||  |||||||||||| ||||||||||||||||||||||||||||  |||||| ||||||    
T  52437035 cataagacaagtaaaacaataaacagaaaagtaaaagtcacagtgagtttgttaacccagttcggtgcaacgtcacctactctggaggctaccgagtcag 52436936  T
Q  387 gaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaacctagg 485  Q
    |||| ||||| ||||||  ||||| || ||||||||| |||| |||||||||||| |||||| ||||| ||||| ||||||||||||| || ||||||||    
T  52436935 gaagaaaatccactagtacagtccttattcaatagctttcagtaaactcctcgttcgcactatatgacataggatctacccgtactgacttcaacctagg 52436836  T
Q  486 aactcctagatctgagatctcatctcacttccttacaactgatcatagcccctatgcttctc 547  Q
    |||||||||||||||||||||||| |||| |||||||| |||||| ||||||| || |||||    
T  52436835 aactcctagatctgagatctcatcccactcccttacaaatgatcacagcccctgtgattctc 52436774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 189 - 512
Target Start/End: Original strand, 33062221 - 33062555
Alignment:
Q  189 tgaaattctggcacgttagacttaagatgttctataagattttc-aacacaagttatacagaaaca--gatgttgaatgaaatgtttcgaacactaagct 285  Q
    ||||||||||||||||||||||||||||||||||   ||| ||| ||||| | ||| ||||||| |  |||||||||| ||| | |  ||||| ||||||    
T  33062221 tgaaattctggcacgttagacttaagatgttctacgcgatgttccaacaccaattacacagaaaaatagatgttgaataaaaagatcagaacattaagct 33062320  T
Q  286 aacaaaagacaagtaaaacacaaa-------cataaaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctac 378  Q
    |||| |  ||||| | |||| |||       ||| |||| |||||||| |  |||||||||||| ||||||||||||||||||||||||||||| |||||    
T  33062321 aacagataacaaggataacaaaaataacagacatgaaagaaaatggcatagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctac 33062420  T
Q  379 caagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgaattt 477  Q
    |||| ||| ||||||||| ||||||||||||| || ||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||| ||     
T  33062421 caagccagaaaggaaatccactagtgtagtccttattcaatagctcttagcaaactcctcgtttgcactatatgacctaggacctacccttactgacttc 33062520  T
Q  478 aacctaggaactcctagatctgagatctcatctca 512  Q
    ||||||||||||||||||||||||| | |||||||    
T  33062521 aacctaggaactcctagatctgagaccccatctca 33062555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 354 - 547
Target Start/End: Original strand, 17012013 - 17012207
Alignment:
Q  354 caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atga 452  Q
    |||| |||||||||||||| ||||||||| ||||||||||||| ||||||||||||| || |||| |||| |||||||||||||||||||||||| ||||    
T  17012013 caacatcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaacagctttcagcaaactcctcgtttgcactatatga 17012112  T
Q  453 cctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttccttacaactgatcatagcccctatgcttctc 547  Q
    ||||||||||||| ||||||| || ||||||||||||||| ||||||||||||||||||| | ||||||||||||||| | ||||| || |||||    
T  17012113 cctaggacctacctgtactgacttcaacctaggaactcctggatctgagatctcatctcattcccttacaactgatcacaacccctgtgattctc 17012207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 332 - 511
Target Start/End: Original strand, 17038236 - 17038414
Alignment:
Q  332 agtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaa 431  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||| ||||||| ||||||||||||| || ||  |||||||||||||    
T  17038236 agtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccagga-ggaaatccactagtgtagtccttattctctagctctcagcaa 17038334  T
Q  432 actcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctc 511  Q
    ||||||||||| |||||| ||| |||||||||||| |  ||| || ||||||||||||||||||||||||||| ||||||    
T  17038335 actcctcgtttacactaaagacataggacctacccatcttgacttcaacctaggaactcctagatctgagatcccatctc 17038414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 331 - 514
Target Start/End: Complemental strand, 26972572 - 26972386
Alignment:
Q  331 gagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagc 429  Q
    ||||||||| || |||||||||| |||   ||||||||||||| ||||||||| ||| ||||||||| ||||||||||||| || |||||||||||||||    
T  26972572 gagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagccagtaaggaaatccactagtgtagtccttattcaatagctctcagc 26972473  T
Q  430 aaactcctcgtttgcacta-atgacctaggacctacccgtactgaattt-aacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||||| ||||| |||||||||||||||||||||  || ||| ||||||||||||||||||||||||||| |||||||||    
T  26972472 aaactcctcgtttacactatatgacctaggacctacccgtatagactttcaacctaggaactcctagatctgagatcccatctcact 26972386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 331 - 514
Target Start/End: Original strand, 4246022 - 4246207
Alignment:
Q  331 gagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagc 429  Q
    ||||||||| || |||||||||| |||   ||||||||||||| ||||||||| ||||||||||||| ||||||||||||| || |||||||||||||||    
T  4246022 gagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagacaggaaggaaatccactagtgtagtccttattcaatagctctcagc 4246121  T
Q  430 aaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||||| ||||| ||||||||||||||||| |||  || || |||||||||||||||||||||||||||  ||||||||    
T  4246122 aaactcctcgtttacactatatgacctaggacctacctgtatagacttcaacctaggaactcctagatctgagatcctatctcact 4246207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 362 - 514
Target Start/End: Original strand, 1973332 - 1973484
Alignment:
Q  362 cctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacc 461  Q
    ||||||||||| | ||||||||||||||||||||| ||||||||||||| || || ||||||||||| ||||||||| ||| |||||| |||||||||||    
T  1973332 cctactctgggggataccaagtcaggaaggaaatccactagtgtagtccttattctatagctctcagaaaactcctcatttacactaaagacctaggacc 1973431  T
Q  462 tacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||| ||| || ||||||||||||||||||||||||||| |||||||||    
T  1973432 tacccgtattgatttcaacctaggaactcctagatctgagatcccatctcact 1973484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 360 - 514
Target Start/End: Complemental strand, 11668004 - 11667850
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctagga 459  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||||||||||| || || ||||||||||||||||||||||||| |||||| ||||  |||    
T  11668004 cacctactctgggggctaccaagccaggaaggaaatctactagtgtagtccttattctatagctctcagcaaactcctcgtttacactaaagaccatgga 11667905  T
Q  460 cctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||  || || ||||||||||||||||||||||||||  |||||||||    
T  11667904 cctacccgtatagacttcaacctaggaactcctagatctgagattccatctcact 11667850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 314 - 512
Target Start/End: Complemental strand, 23478123 - 23477924
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgt 412  Q
    |||||||||||||||  ||||||||| ||  ||||| ||| |||   ||||||||||||| ||||||||| ||||||||||||| ||||||||||||| |    
T  23478123 aaagtaaatggcacagtgagtttgttgacctagttcagtgacaaacacacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcctt 23478024  T
Q  413 aatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctca 512  Q
    | || ||||||||||||||||  || |||| || ||| ||||||| ||||||||||| ||| || ||||||||||||||||||||||||||| |||||||    
T  23478023 attctatagctctcagcaaacaacttgtttacaataaagacctagaacctacccgtattgatttcaacctaggaactcctagatctgagatcccatctca 23477924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 314 - 514
Target Start/End: Complemental strand, 47941527 - 47941327
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgt 412  Q
    |||||||| ||||||   ||||||||||| || |||||  |||| |||||||| |||||||||||| |||||| |||||||||| ||||||||||||| |    
T  47941527 aaagtaaaaggcacagtaagtttgttaacccaattcggcacaac-tcacctacatctgggagctacaaagtcaagaaggaaatccactagtgtagtcctt 47941429  T
Q  413 aatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctca 512  Q
    | || |||||||| |||||||||||||||| |||||| ||| ||||||||||||||   || || ||||||| |||||||| ||||||||||||||||||    
T  47941428 attctatagctcttagcaaactcctcgtttacactaaagacataggacctacccgtctagatttcaacctagtaactcctaaatctgagatctcatctca 47941329  T
Q  513 ct 514  Q
    ||    
T  47941328 ct 47941327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 360 - 514
Target Start/End: Complemental strand, 17851514 - 17851360
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctagga 459  Q
    ||||||||||||| ||||| ||| || |||||||||| ||||||||||||| || || ||||||||||||||||||||||||| |||||| |||||||||    
T  17851514 cacctactctgggggctactaagccaagaaggaaatccactagtgtagtccttattctatagctctcagcaaactcctcgtttacactaaagacctagga 17851415  T
Q  460 cctacccgtactgaattt-aacctaggaactcctagatctgagatctcatctcact 514  Q
    |||| |||| ||  |||| ||||||||||||||||||||||||||| |||||||||    
T  17851414 cctagccgt-ctacatttcaacctaggaactcctagatctgagatcccatctcact 17851360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 314 - 514
Target Start/End: Original strand, 12753031 - 12753232
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtgc-aacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgt 412  Q
    |||||||| ||||||   ||||||||||| ||||||||||  ||   ||||||||||||  ||||||||| ||||||| ||||| ||||| ||||||| |    
T  12753031 aaagtaaaaggcacaacaagtttgttaacccagttcggtgagaaacacacctactctggaggctaccaagccaggaagtaaatccactagcgtagtcctt 12753130  T
Q  413 aatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctca 512  Q
    | || |||||||||||| |||||||||||| |||||| |||||||||||||||| || ||| || ||||||| ||||||||||||||||||  |||||||    
T  12753131 attctatagctctcagcgaactcctcgtttacactaaagacctaggacctacccatattgatttcaacctagaaactcctagatctgagattccatctca 12753230  T
Q  513 ct 514  Q
    ||    
T  12753231 ct 12753232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 374 - 514
Target Start/End: Complemental strand, 20841392 - 20841252
Alignment:
Q  374 gctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactga 473  Q
    ||||||||| ||||||||||||| ||||||||||||| || |  |||||||| |||||||||||||||| |||||| ||||||||||||||  |||| ||    
T  20841392 gctaccaagccaggaaggaaatccactagtgtagtccttattttatagctcttagcaaactcctcgtttacactaaagacctaggacctacatgtacaga 20841293  T
Q  474 atttaacctaggaactcctagatctgagatctcatctcact 514  Q
     || ||||||||||||||||||||||||||| |||||||||    
T  20841292 cttcaacctaggaactcctagatctgagatcccatctcact 20841252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 332 - 514
Target Start/End: Original strand, 13165385 - 13165566
Alignment:
Q  332 agtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagca 430  Q
    |||||||| ||||||||||||| |||   |||||||| |||| |||||||||  |||||||||||| ||||||||||||| || ||||||||||||||||    
T  13165385 agtttgttgactcagttcggtgacaaa--cacctactgtggg-gctaccaagctaggaaggaaatccactagtgtagtccttattcaatagctctcagca 13165481  T
Q  431 aactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
     ||||||||||| || || |||||||||||||||||||||  || || ||| ||||||||||||||||| ||||| |||||||||    
T  13165482 tactcctcgtttacagtatatgacctaggacctacccgtatagacttcaacataggaactcctagatctaagatcccatctcact 13165566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 360 - 514
Target Start/End: Complemental strand, 14745924 - 14745770
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctagg 458  Q
    |||| |||||||| ||||||||| ||||||| ||||| ||||||||||||| || |||||||||||||||||||| ||||||| ||||| ||||| || |    
T  14745924 caccaactctgggggctaccaagccaggaagaaaatccactagtgtagtccttattcaatagctctcagcaaactactcgtttacactatatgacata-g 14745826  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||||  || || ||||||||||||| ||||||||||||| |||||||||    
T  14745825 acctacccgtatagacttcaacctaggaactcttagatctgagatcacatctcact 14745770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 335 - 517
Target Start/End: Complemental strand, 17379790 - 17379607
Alignment:
Q  335 ttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaac 433  Q
    |||||||| |||||||||| |||   ||||||||||||| ||||||||| ||||||||||||| ||||||||||||| || || | |  |||||||||||    
T  17379790 ttgttaacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcta-atttctcagcaaac 17379692  T
Q  434 tcctcgtttgca-ctaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    ||||||||| || ||   ||||||||||||||||||  ||| || ||||||| ||||||||||||||||||| ||||||||||||    
T  17379691 tcctcgtttacaactctagacctaggacctacccgtcttgacttcaacctagaaactcctagatctgagatcccatctcacttcc 17379607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 189 - 273
Target Start/End: Original strand, 17011924 - 17012009
Alignment:
Q  189 tgaaattctggcacgttagacttaagatgttctataagat-tttcaacacaagttatacagaaacagatgttgaatgaaatgtttc 273  Q
    |||||||||||||||||| |||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  17011924 tgaaattctggcacgttaaacttaagatgttttatacgatgtttcaacacaagttatacagaaacagatgttgaatgaaatgtttc 17012009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 335 - 517
Target Start/End: Complemental strand, 17355998 - 17355815
Alignment:
Q  335 ttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaac 433  Q
    |||||||| |||||||||| |||   ||||||||||||| ||||||||| | ||||||||||| || |||||||||| || || | |  |||||||||||    
T  17355998 ttgttaacccagttcggtgacaaacacacctactctgggggctaccaagcctggaaggaaatccaccagtgtagtccttattcta-atttctcagcaaac 17355900  T
Q  434 tcctcgtttgca-ctaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    ||||||||| || ||    |||||||||||||||||  ||| || ||||||||||||| ||||||||||||| ||||||||||||    
T  17355899 tcctcgtttacaactctacacctaggacctacccgtcttgacttcaacctaggaactcatagatctgagatcccatctcacttcc 17355815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 364 - 517
Target Start/End: Complemental strand, 51472230 - 51472077
Alignment:
Q  364 tactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgca-ctaatgacctaggacct 462  Q
    ||||||||| ||||||||  || |||||||||| ||||||||||||| || || | || ||||| |||||||||||||| || ||   ||||||||||||    
T  51472230 tactctgggggctaccaaaccaagaaggaaatccactagtgtagtccttattcta-agttctcatcaaactcctcgtttacaactctagacctaggacct 51472132  T
Q  463 acccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    ||||||  | | || |||||||||||||||||||||||||||  |||||||||||    
T  51472131 acccgtctttatttcaacctaggaactcctagatctgagatccaatctcacttcc 51472077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 317 - 514
Target Start/End: Complemental strand, 15804296 - 15804099
Alignment:
Q  317 gtaaatggcacatagagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaat 415  Q
    ||||||||||||  |||||||||||| |||||| ||| |||   |||||||| |||| ||||||||| ||||||| ||||  ||||||||||||| || |    
T  15804296 gtaaatggcacagcgagtttgttaacccagttcagtgacaaacacacctactatgggggctaccaagccaggaagaaaattcactagtgtagtccttatt 15804197  T
Q  416 caatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    | |  | |||||||||||  | ||||| ||  | | ||||||||||||||||||| ||| || ||| || |||||||||||||||||||||||| |||||    
T  15804196 ctaatgttctcagcaaac--cacgtttacaacacaagacctaggacctacccgtattgatttcaacttaagaactcctagatctgagatctcatttcact 15804099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 313 - 517
Target Start/End: Complemental strand, 18390294 - 18390089
Alignment:
Q  313 aaaagtaaatggcacatagagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccg 411  Q
    ||||||||||||||||     ||||||||| |||||||||| |||   ||||||||||||| ||||||||| ||| ||||||||| ||||||||| ||      
T  18390294 aaaagtaaatggcacaggtgatttgttaacccagttcggtgacaaacacacctactctgggggctaccaagccagtaaggaaatccactagtgtaatcat 18390195  T
Q  412 taatcaatagctctcagcaaactcctcgtttgca-ctaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatct 510  Q
    |  || | || |||||||||||||   |||| || || || |||||||||| ||||||| ||| || ||| ||| ||||||||||||||||||| |||||    
T  18390194 tgttcta-agttctcagcaaactcgaagtttacaacttatcacctaggaccaacccgtattgacttcaacgtagaaactcctagatctgagatcccatct 18390096  T
Q  511 cacttcc 517  Q
    |||||||    
T  18390095 cacttcc 18390089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 314 - 514
Target Start/End: Complemental strand, 10340345 - 10340145
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtgcaacgt-cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgt 412  Q
    |||||||| |||||| | |||||||| || |||||||||   | || ||||||||||||| ||||| ||||||||||||||||| |||| |||||||  |    
T  10340345 aaagtaaaaggcacagaaagtttgttgacccagttcggtaacaagtacacctactctgggggctactaagtcaggaaggaaatccactattgtagtcttt 10340246  T
Q  413 aatcaatagctctcagcaaactcctcgtttgca-ctaatgacctaggacctacccgtactgaattt-aacctaggaactcctagatctgagatctcatct 510  Q
    | ||   || | |||| ||||  |  |||| || || | |||||||||||||||||| ||  |||| |||||||||||||||||||||||||||||||||    
T  10340245 attcttaagttttcagtaaac--catgtttacaacttacgacctaggacctacccgt-ctatatttcaacctaggaactcctagatctgagatctcatct 10340149  T
Q  511 cact 514  Q
    ||||    
T  10340148 cact 10340145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 333 - 395
Target Start/End: Complemental strand, 49086761 - 49086698
Alignment:
Q  333 gtttgttaactcagttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaat 395  Q
    |||||||||| ||||||||||||||||||||||| | |||| ||||||||| |||||| |||||    
T  49086761 gtttgttaacccagttcggtgcaacgtcacctacatgtgggggctaccaagccaggaaagaaat 49086698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 451 - 517
Target Start/End: Original strand, 8282028 - 8282094
Alignment:
Q  451 gacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    |||| |||||||||||||  | | || |||||||||| |||||||||||||||| ||||||||||||    
T  8282028 gaccaaggacctacccgtcttaacttcaacctaggaattcctagatctgagatcccatctcacttcc 8282094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 344 - 401
Target Start/End: Original strand, 50057521 - 50057579
Alignment:
Q  344 cagttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaatcaacta 401  Q
    |||||| ||||||| |||||||| |||||| ||||||||||||||||||||||| ||||    
T  50057521 cagttcagtgcaacttcacctacatctgggggctaccaagtcaggaaggaaatccacta 50057579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 403
Target Start/End: Complemental strand, 20859684 - 20859641
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagt 403  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||||    
T  20859684 cacctactctgggggctaccaagccaggaaggaaatccactagt 20859641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 403
Target Start/End: Original strand, 8902055 - 8902125
Alignment:
Q  334 tttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagt 403  Q
    ||||||||||||||| |||| |||   ||||| ||||| |||||||||||||||||||||| || ||||||    
T  8902055 tttgttaactcagtttggtgacaaacacacctgctctgagagctaccaagtcaggaaggaattccactagt 8902125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 478 - 514
Target Start/End: Original strand, 24986135 - 24986171
Alignment:
Q  478 aacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||||  |||||||||||||||||||||||    
T  24986135 aacctaggaacttatagatctgagatctcatctcact 24986171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 189 - 547
Target Start/End: Complemental strand, 17288 - 16927
Alignment:
Q  189 tgaaattctggcacgttagacttaagatgttctataagat-tttcaacacaagttatacagaaacagatgttgaatgaaatgtttcgaacactaagctaa 287  Q
    |||||||||||||||||||| |||||||||| |||| ||| ||||||||||||||||||| ||||||| ||||||||| |||||||||||| ||||||||    
T  17288 tgaaattctggcacgttagatttaagatgttatatacgatgtttcaacacaagttatacataaacagacgttgaatgatatgtttcgaacattaagctaa 17189  T
Q  288 caaaagacaagtaaaacac-aaacataaaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagct-accaagtca 385  Q
    ||||||||||||||||||| |||||||||||||||||||| |  |||||||||||| |||||||||||||||||||||||| |||| ||| |||||  ||    
T  17188 caaaagacaagtaaaacacaaaacataaaagtaaatggcatagtgagtttgttaacccagttcggtgcaacgtcacctactatggg-gctaaccaatcca 17090  T
Q  386 ggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaacctag 484  Q
    ||||||||||| ||||||||||||| || ||||||||||||| |||||||||||||||||||| ||||||||| ||| ||||||||||| || |||||||    
T  17089 ggaaggaaatccactagtgtagtccttattcaatagctctcaacaaactcctcgtttgcactatatgacctagtacccacccgtactgacttcaacctag 16990  T
Q  485 gaactcctagatctgagatctcatctcacttccttacaactgatcatagcccctatgcttctc 547  Q
    |||||||||||||||||||| ||||||||| |||||||||| |||| ||||||| || |||||    
T  16989 gaactcctagatctgagatcccatctcactcccttacaactaatcacagcccctgtgattctc 16927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 209; Significance: 1e-114; HSPs: 55)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 189 - 547
Target Start/End: Complemental strand, 16137896 - 16137537
Alignment:
Q  189 tgaaattctggcacgttagacttaagatgttctataagat-tttcaacacaagttatacagaaacagatgttgaatgaaatgtttcgaacactaagctaa 287  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  16137896 tgaaattctggcacgttagacttacgatgttctatacgatgtttcaacacaagttatacaaaaatagatgttgaatgaaatgtttcgaacactaagctaa 16137797  T
Q  288 caaaagacaagtaaaacacaaa-cataaaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcag 386  Q
    || |||||||| ||||  |||| |||||| ||||| ||||||  |||||||||||| ||||| | ||||||||||||||||||| | ||||||||| |||    
T  16137796 cacaagacaagaaaaatgcaaagcataaa-gtaaaaggcacaatgagtttgttaacccagtttgatgcaacgtcacctactctgagggctaccaagccag 16137698  T
Q  387 gaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctagga 486  Q
    |||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| || |||||||||    
T  16137697 gaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttgcagtaatgacctaggatctacccgtactgacttcaacctagga 16137598  T
Q  487 actcctagatctgagatctcatctcacttccttacaactgatcatagcccctatgcttctc 547  Q
    |||| || |||||||||| ||||||||| |||||||||| |||| | |||||||| |||||    
T  16137597 actcataaatctgagatcacatctcactcccttacaacttatcacaacccctatgattctc 16137537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 193 - 541
Target Start/End: Original strand, 15038194 - 15038545
Alignment:
Q  193 attctggcacgttagacttaagatgttctataagat-tttcaacacaagttatacagaaacagatgttgaatgaaatgtttcgaacactaagctaacaaa 291  Q
    |||||||||||||||||||| |||||| |||  ||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |    
T  15038194 attctggcacgttagacttacgatgttttatgtgatgtttcaacacaagttatacagaaacatatgttgaataaaatgtttcgaacactaagctaacaca 15038293  T
Q  292 agacaagtaaaaca--caaacataaaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaa 389  Q
    ||||||| |||| |  ||||     ||||||| | ||||  |||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||    
T  15038294 agacaagaaaaaaaagcaaagcacgaagtaaaagacacagtgagtttgttaacccagtttggtgcaacgtcacctactctgggggctaccaagtcaggaa 15038393  T
Q  390 ggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaact 489  Q
    ||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||| || ||||||| ||||    
T  15038394 ggaaatccactagtgtagtccgtattcaatagctctcaggaaactcctcgtttgcacaaatgacctaggaccaacccgtactgacttcaacctagtaact 15038493  T
Q  490 cctagatctgagatctcatctcacttccttacaactgatcatagcccctatg 541  Q
    ||||||||||||||| ||||||||| | ||||||||||||||||||||||||    
T  15038494 cctagatctgagatcccatctcactccattacaactgatcatagcccctatg 15038545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 188 - 536
Target Start/End: Original strand, 19215797 - 19216146
Alignment:
Q  188 ctgaaattctggcacgttagacttaagatgttctataagat-tttcaacacaagttatacagaaacagatgttgaatgaaatgtttcgaacactaagcta 286  Q
    |||||||||||||| |||||||||| ||||||||||  ||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  19215797 ctgaaattctggcatgttagacttacgatgttctatgcgatgtttcaacacaagttatagagaaacagatgttgaataaaatgtttcgaacactaagcta 19215896  T
Q  287 acaaaagacaagtaaaacacaaacataaaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcag 386  Q
    ||| ||||||||  |||  |||    ||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||| || | ||||||| |||    
T  19215897 acacaagacaagagaaatgcaacgcgaaaagtaaaaggcacattgagtttgttaacccagttcggtgcaacgtcacctactctagg-gataccaagccag 19215995  T
Q  387 gaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaacctagg 485  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| | || ||| ||||    
T  19215996 gaaggaaatccactagtgtagtccgtattcaatagctctcagcaaactcctcgttttcactatatgacctaggacctacccgtactaacttcaacttagg 19216095  T
Q  486 aactcctagatctgagatctcatctcacttccttacaactgatcatagccc 536  Q
    ||||||||||| ||||||| ||||||||| ||||||||||||||| |||||    
T  19216096 aactcctagatttgagatcccatctcactcccttacaactgatcacagccc 19216146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 188 - 530
Target Start/End: Original strand, 20002971 - 20003324
Alignment:
Q  188 ctgaaattctggcacgttagacttaagatgttctataagattttc-aacacaagttatacagaaac--agatgttgaatgaaatgtttcgaacactaagc 284  Q
    ||||||||||||||||||||||||||||||||||| | ||| ||| ||||| ||||  ||||| |   ||||||||||| ||| | |  |||||  ||||    
T  20002971 ctgaaattctggcacgttagacttaagatgttctacatgatgttcgaacaccagtttcacagataattagatgttgaataaaaagatcagaacatcaagc 20003070  T
Q  285 taacaaaagacaagtaaaacacaa-------acataaaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagcta 377  Q
    ||||| |  ||||| | |||| ||       |||| |||| ||||||||||  |||||||| ||| |||||||||||||||||||||||| | || ||||    
T  20003071 taacagataacaaggataacaaaagtaacagacatgaaagaaaatggcacaatgagtttgtgaacccagttcggtgcaacgtcacctactttaggggcta 20003170  T
Q  378 ccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgaatt 476  Q
    ||||| ||||||||||||||||||||||||| | || |||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||| | ||    
T  20003171 ccaagccaggaaggaaatcaactagtgtagttcttattcaatagctctcaggaaacccctcgtttgcactatatgacctaggacctacccgtacttactt 20003270  T
Q  477 taacctaggaactcctagatctgagatctcatctcacttccttacaactgatca 530  Q
     ||||||||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  20003271 caacctaggaactcctagatttgagatcccatctcactcccttacaactgatca 20003324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 319 - 547
Target Start/End: Original strand, 9384589 - 9384817
Alignment:
Q  319 aaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaa 418  Q
    ||||||||||  |||||||||||| ||||||||| ||||||| |||| |||||  ||||||||||||||||||||||| ||||||||||||| || ||||    
T  9384589 aaatggcacagtgagtttgttaacccagttcggtacaacgtcgcctattctggtggctaccaagtcaggaaggaaatccactagtgtagtccttattcaa 9384688  T
Q  419 tagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||| || ||||||||||| ||||||||| ||    
T  9384689 tagctctcagcaaactcctcgtttgcactatatgacctaggacctacccgtactgacttcaacctaggaact-cttgatctgagatcccatctcactccc 9384787  T
Q  518 ttacaactgatcatagcccctatgcttctc 547  Q
    | |||| |||||| | ||||| || |||||    
T  9384788 taacaaatgatcacaacccctgtgattctc 9384817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 314 - 530
Target Start/End: Complemental strand, 15003351 - 15003134
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgta 413  Q
    |||| ||||||||||  ||||| |||||| ||||||||||||| ||||||||||||||  | ||||||| || |||||||||| ||||||||||||| ||    
T  15003351 aaagaaaatggcacagtgagttcgttaacccagttcggtgcaatgtcacctactctggtggataccaagccatgaaggaaatccactagtgtagtcctta 15003252  T
Q  414 atcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctca 512  Q
     ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || ||| ||||||||||||||| |||||||||||||||    
T  15003251 ttcaatagctctcagcaaactccttgtttgcactatatgacctaggacctacccgtactgacttcaacataggaactcctagatttgagatctcatctca 15003152  T
Q  513 cttccttacaactgatca 530  Q
    || |||||||| ||||||    
T  15003151 ctcccttacaaatgatca 15003134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 314 - 514
Target Start/End: Complemental strand, 16309545 - 16309346
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgta 413  Q
    |||||||| ||||||   ||||||||||| |||||| |||||||||||||||||||||| ||||||||| ||||| ||||||| |||||| |||||| ||    
T  16309545 aaagtaaaaggcacaggaagtttgttaacccagttcagtgcaacgtcacctactctgggggctaccaagccagga-ggaaatccactagtatagtcctta 16309447  T
Q  414 atcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcac 513  Q
     ||  |||||||||||||||||||||||| |||||| ||||||||||||||||||  ||| || ||||||||||||| ||||||||||||||||||||||    
T  16309446 ttctctagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtcttgacttcaacctaggaactcgtagatctgagatctcatctcac 16309347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 330 - 530
Target Start/End: Complemental strand, 12444892 - 12444694
Alignment:
Q  330 agagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcag 428  Q
    ||||||||||||| |||||||||| ||||  ||||||||||||  |||||||||  ||||||||| || |||||||||||||||| |||| |||||||||    
T  12444892 agagtttgttaacccagttcggtgacaaca-cacctactctggaggctaccaagctaggaaggaactccactagtgtagtccgtattcaaaagctctcag 12444794  T
Q  429 caaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttccttacaactgat 528  Q
    |||||  | |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||| || |||||| |||||||||||||    
T  12444793 caaac--cacgtttgcactaatgacctaggacctacccgtactgacttcaacctaggaactcctagatttgagatcccacctcactcccttacaactgat 12444696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 360 - 514
Target Start/End: Original strand, 17855211 - 17855366
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctagg 458  Q
    ||||||||||||  |||| |||| ||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||||||||    
T  17855211 cacctactctggaggctatcaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctagg 17855310  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||||  || || |||||||||||||||||||||||||||||||||||||    
T  17855311 acctacccgtatagacttcaacctaggaactcctagatctgagatctcatctcact 17855366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 360 - 514
Target Start/End: Complemental strand, 20470345 - 20470191
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctagga 459  Q
    ||||||||||||  ||||||||| ||||||||||||| ||||||||| ||| || || ||||||||||||||||||||||||| |||||| |||||||||    
T  20470345 cacctactctggaggctaccaagccaggaaggaaatccactagtgtactccttattctatagctctcagcaaactcctcgtttacactaaagacctagga 20470246  T
Q  460 cctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||  || || |||||||||||||||||||||||||||||||||||||    
T  20470245 cctacccgtatagacttcaacctaggaactcctagatctgagatctcatctcact 20470191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 314 - 494
Target Start/End: Complemental strand, 15007524 - 15007344
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgta 413  Q
    |||| ||| ||||||  |||||||||||| ||||||| ||||| ||||||||||||||| | ||||||| || |||||||||| ||||||||||| | ||    
T  15007524 aaagaaaaaggcacagtgagtttgttaacccagttcgatgcaaagtcacctactctggg-gataccaagccatgaaggaaatccactagtgtagtactta 15007426  T
Q  414 atcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaacctaggaactcctag 494  Q
     |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| || |||||||||||||||||    
T  15007425 ttcaatagctctcagcaaactcctcgtttgcactatatgacctaggacctacccgtgctgacttcaacctaggaactcctag 15007344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 360 - 514
Target Start/End: Original strand, 33665810 - 33665965
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctagg 458  Q
    ||||||||||||| ||||| ||| ||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||| ||||    
T  33665810 cacctactctgggggctactaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacatagg 33665909  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||||  || || |||| ||||||||||||||||||||||||||||||||    
T  33665910 acctacccgtatagacttcaaccaaggaactcctagatctgagatctcatctcact 33665965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 360 - 514
Target Start/End: Original strand, 25805470 - 25805624
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctagga 459  Q
    |||||||||| |  ||||||||| ||||||||||||| ||||||||||||| || |  ||||||||||||||||||||||||| |||||| |||||||||    
T  25805470 cacctactctagaggctaccaagccaggaaggaaatccactagtgtagtccttattatatagctctcagcaaactcctcgtttacactaaagacctagga 25805569  T
Q  460 cctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||| ||| || ||||||||||||||||||||||||||| |||||||||    
T  25805570 cctacccgtattgatttcaacctaggaactcctagatctgagatcccatctcact 25805624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 331 - 514
Target Start/End: Original strand, 20558289 - 20558473
Alignment:
Q  331 gagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagca 430  Q
    |||||||||||| |||||||||||||||||||||| |||||  ||||||||| ||||||||||||| |||||||||| || || || | | |||||||||    
T  20558289 gagtttgttaacccagttcggtgcaacgtcacctagtctggaggctaccaagccaggaaggaaatccactagtgtagcccttattctaaaactctcagca 20558388  T
Q  431 aactcctcgtttgcac-taatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||||| ||| | ||||||||||||||||||||   || || |||||| |||||||||||| |||||||||||||||||    
T  20558389 aactcctcgtttacactttatgacctaggacctacccgtctagacttcaacctaagaactcctagatatgagatctcatctcact 20558473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 360 - 514
Target Start/End: Complemental strand, 9281851 - 9281696
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctagg 458  Q
    ||||||||||||| ||||||||| | ||||||||||| ||||||||||||| || |||||||||||||||||||||||||||| ||||| |||||||| |    
T  9281851 cacctactctgggggctaccaagcctggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaag 9281752  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||||  || || ||||||||||||||||||| ||||||| |||||||||    
T  9281751 acctacccgtatagacttcaacctaggaactcctagatttgagatcccatctcact 9281696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 360 - 514
Target Start/End: Original strand, 13195340 - 13195495
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctagg 458  Q
    |||||||||| || ||||||||| || |||||||||| ||||||||||||| || |||||||||||||| ||||||||||||| ||||| ||||||||||    
T  13195340 cacctactctaggggctaccaagccatgaaggaaatccactagtgtagtccttattcaatagctctcagaaaactcctcgtttacactatatgacctagg 13195439  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||||  || || ||||||||||||||||||||||||||| |||||||||    
T  13195440 acctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcact 13195495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 325 - 514
Target Start/End: Complemental strand, 34657329 - 34657139
Alignment:
Q  325 cacatagagtttgttaactcagttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagct 423  Q
    |||| ||||||||||||| ||||||||  |||| |||||||| ||| || ||||||||| || |||||||||| ||||||||||||| || |||||||||    
T  34657329 cacagagagtttgttaacccagttcggcacaac-tcacctacatctaggggctaccaagccaagaaggaaatccactagtgtagtccttattcaatagct 34657231  T
Q  424 ctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||||||||||| ||||| ||||||||||||| |||||||  || || |||||||||||||| ||||||||||| ||||||||||    
T  34657230 ctcagcaaactcctcgtttacactatatgacctaggaccaacccgtatagatttcaacctaggaactcccagatctgagatatcatctcact 34657139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 314 - 514
Target Start/End: Original strand, 28623499 - 28623699
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgt 412  Q
    |||||||| |||| | ||||||||||||| ||||||||  |||| |||||||| ||| || ||||||||| |||||||||||| |||||||||||||| |    
T  28623499 aaagtaaaaggcagagagagtttgttaacccagttcggcacaac-tcacctacatctaggggctaccaagccaggaaggaaataaactagtgtagtcctt 28623597  T
Q  413 aatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctca 512  Q
    | || | |||||| |||||| || |||||| |||| | ||||||||||||||||||| ||| || ||||||||||||||||||| |||||||||||||||    
T  28623598 attctaaagctctgagcaaaatcttcgtttacacttaagacctaggacctacccgtattgatttcaacctaggaactcctagatttgagatctcatctca 28623697  T
Q  513 ct 514  Q
    ||    
T  28623698 ct 28623699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 332 - 514
Target Start/End: Original strand, 24501812 - 24501995
Alignment:
Q  332 agtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagca 430  Q
    ||||||||||| |||||||||| |||   |||||||||| |  ||||||||| ||| ||||||||| ||||||||||||| || || |||||||||||||    
T  24501812 agtttgttaacccagttcggtgacaaacacacctactctagaggctaccaagccagaaaggaaatccactagtgtagtccttattctatagctctcagca 24501911  T
Q  431 aactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||| ||| |||||| ||||||||||||||||||| ||| || ||||||| ||||||||||||| ||||| |||||||||    
T  24501912 aactcctcatttacactaaagacctaggacctacccgtattgatttcaacctagaaactcctagatctaagatcccatctcact 24501995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 360 - 514
Target Start/End: Complemental strand, 20989907 - 20989753
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctagga 459  Q
    ||||||||||||| ||||||||||||| ||||||||| ||||||||||||| || || ||||||||||||||||||||||||| || ||| |||||| ||    
T  20989907 cacctactctgggggctaccaagtcagaaaggaaatccactagtgtagtccttattctatagctctcagcaaactcctcgtttacattaaagacctatga 20989808  T
Q  460 cctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||| |||  || || ||||||| |||||||||||| ||||||||||||||||    
T  20989807 cctacctgtatagacttgaacctagaaactcctagatccgagatctcatctcact 20989753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 378 - 514
Target Start/End: Complemental strand, 21723533 - 21723396
Alignment:
Q  378 ccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgaatt 476  Q
    ||||| ||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||   || ||    
T  21723533 ccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtctagattt 21723434  T
Q  477 taacctaggaactcctagatctgagatctcatctcact 514  Q
     ||||||||||||||||||||||||||| |||||||||    
T  21723433 caacctaggaactcctagatctgagatcccatctcact 21723396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 331 - 514
Target Start/End: Complemental strand, 23882866 - 23882682
Alignment:
Q  331 gagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagc 429  Q
    ||||||||| || |||||||||| |||   ||||||||||||| |||||||| |||||||||||||| ||||||||||||  || || ||||||| ||||    
T  23882866 gagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaaatcaggaaggaaatccactagtgtagtctttattctatagctcccagc 23882767  T
Q  430 aaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||| | |||| |||||| ||||||||||||||| ||| ||| || |||||| |||||||||||||||| |||||||||||||    
T  23882766 aaactctttgtttacactaaagacctaggacctacctgtattgatttcaacctatgaactcctagatctgatatctcatctcact 23882682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 360 - 514
Target Start/End: Complemental strand, 29255057 - 29254904
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctagga 459  Q
    |||||||||| || |||| |||| ||||||| ||||| ||||||||||||| || || ||||||||||||||||||||||||| |||||| |||||||||    
T  29255057 cacctactctagg-gctatcaagccaggaagaaaatccactagtgtagtccttattctatagctctcagcaaactcctcgtttacactaaagacctagga 29254959  T
Q  460 cctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||| ||| || ||| || |||||||||||||||||||| |||||||||    
T  29254958 cctacccgtattgatttcaacttatgaactcctagatctgagatcccatctcact 29254904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 360 - 514
Target Start/End: Complemental strand, 17864567 - 17864413
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctagga 459  Q
    ||||||||||||| | ||||||  ||||||| ||||| ||||||||||||| || || ||||||||||||||||||||||||| |||||| |  ||||||    
T  17864567 cacctactctgggggttaccaatccaggaagaaaatccactagtgtagtccttattctatagctctcagcaaactcctcgtttacactaaagtactagga 17864468  T
Q  460 cctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||| |||  || || ||||||||||||||||||||||||||| |||||||||    
T  17864467 cctacctgtatagacttcaacctaggaactcctagatctgagatcccatctcact 17864413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 314 - 514
Target Start/End: Complemental strand, 26965760 - 26965558
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgt 412  Q
    |||||||| |||||| | |||||||| || |||||||||| |||   ||||||||||||  |||| |||||||||||||||||| ||||||||||||| |    
T  26965760 aaagtaaaaggcacaaacagtttgttgacccagttcggtgacaaacacacctactctggaggctatcaagtcaggaaggaaatccactagtgtagtcctt 26965661  T
Q  413 aatcaatagctctcagcaaactcctcgtttgc-actaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctc 511  Q
    | || | || |||||||||||||||| ||| | ||| | ||||||||||||||||||   || || ||||||||||||||||||||||||||| ||||||    
T  26965660 attctaaagttctcagcaaactcctcatttacaacttaagacctaggacctacccgtctagacttcaacctaggaactcctagatctgagatcccatctc 26965561  T
Q  512 act 514  Q
    |||    
T  26965560 act 26965558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 330 - 514
Target Start/End: Complemental strand, 3567593 - 3567410
Alignment:
Q  330 agagtttgttaactcagttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcag 428  Q
    ||||||||||||||||||||||  |||| |||||||| |||||| |||||||||| ||||| | |||| ||||||||||| | || || | |||||||||    
T  3567593 agagtttgttaactcagttcggcacaac-tcacctacatctggg-gctaccaagttaggaaagtaatccactagtgtagttcttattctaaagctctcag 3567496  T
Q  429 caaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||| ||||||||| |||| | ||||||||||||||||||| ||| || |||||| ||||| |||||||| |||||||||||||||    
T  3567495 caaaatcctcgtttacacttaagacctaggacctacccgtattgatttcaacctaagaacttctagatctaagatctcatctcact 3567410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 364 - 485
Target Start/End: Original strand, 32449271 - 32449392
Alignment:
Q  364 tactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctaggaccta 463  Q
    |||||| || ||||||||  ||||||||||||| | ||||||| ||| || | ||||| ||||||||||||||||||||||||||||| |||||||||||    
T  32449271 tactctaggggctaccaaaccaggaaggaaatccattagtgtattccttatttaatagttctcagcaaactcctcgtttgcactaatgtcctaggaccta 32449370  T
Q  464 cccgtactgaatttaacctagg 485  Q
    |||||||||| |||||||||||    
T  32449371 cccgtactgactttaacctagg 32449392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 331 - 514
Target Start/End: Complemental strand, 15897846 - 15897662
Alignment:
Q  331 gagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagc 429  Q
    ||||||||| || |||||||||| |||   ||||||||||||| |||||||||  |||||||||||| ||||||||||||| || || |||||||| |||    
T  15897846 gagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccactagtgtagtccttattctatagctcttagc 15897747  T
Q  430 aaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||| ||| || ||| |||||||||||||||| ||  ||  | |||||||||||  ||||||||||||||  ||||||||    
T  15897746 aaactcctcatttacaataacgacctaggacctacccatatagacgtaaacctaggaacgactagatctgagatccaatctcact 15897662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 360 - 514
Target Start/End: Original strand, 14258927 - 14259082
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctagg 458  Q
    |||||||| |||| |||||||||  |||||||||||| ||||||||||||| || ||||||||||||| ||||||  |||||| || || ||||||||||    
T  14258927 cacctactttgggggctaccaagcgaggaaggaaatccactagtgtagtccttattcaatagctctcaacaaacttatcgtttacaatatatgacctagg 14259026  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||||  || ||  || || |||||||||||||||||||| |||||||||    
T  14259027 acctacccgtatagacttccacttatgaactcctagatctgagatcccatctcact 14259082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 360 - 510
Target Start/End: Original strand, 17234608 - 17234759
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctagg 458  Q
    |||||||||| || ||||||||| |  |||||||||| || |||||||||| || |||||||||||| |||||||||  |||| ||||| |||||||| |    
T  17234608 cacctactctaggggctaccaagcccagaaggaaatccaccagtgtagtccttattcaatagctctctgcaaactccctgtttacactatatgacctatg 17234707  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatct 510  Q
    |||||||||||  || || ||||||||||||||||||||||| |||||||||    
T  17234708 acctacccgtatagacttcaacctaggaactcctagatctgatatctcatct 17234759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 360 - 493
Target Start/End: Complemental strand, 12039824 - 12039691
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctagga 459  Q
    |||||||| |||| |||||||||  ||||||||||||  |||||||||||| || || |||||||||| |||||||||||||| |||||| |||||||||    
T  12039824 cacctactttgggggctaccaagctaggaaggaaatcttctagtgtagtccttattctatagctctcaacaaactcctcgtttacactaaagacctagga 12039725  T
Q  460 cctacccgtactgaatttaacctaggaactccta 493  Q
    ||||| ||||  || || ||||||||||||||||    
T  12039724 cctactcgtatagacttcaacctaggaactccta 12039691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 385 - 514
Target Start/End: Complemental strand, 21706467 - 21706335
Alignment:
Q  385 aggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaaccta 483  Q
    |||||| ||||| ||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||   ||  | ||||||    
T  21706467 aggaagaaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtctagatatcaaccta 21706368  T
Q  484 ggaactcctag--atctgagatctcatctcact 514  Q
    |||||||||||  |||||||||| |||||||||    
T  21706367 ggaactcctagatatctgagatcccatctcact 21706335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 374 - 514
Target Start/End: Original strand, 25964725 - 25964866
Alignment:
Q  374 gctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactg 472  Q
    ||||||||| ||||||||||||| ||||| ||||||| || || ||||| || || |||||| |||||| ||||| |||||||||||||||||||||  |    
T  25964725 gctaccaagccaggaaggaaatccactagggtagtccttattctatagcccttagaaaactcatcgtttacactatatgacctaggacctacccgtatag 25964824  T
Q  473 aatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    | || ||||||||||||||||||||||||||| ||| |||||    
T  25964825 acttcaacctaggaactcctagatctgagatcccatatcact 25964866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 374 - 514
Target Start/End: Original strand, 25969372 - 25969513
Alignment:
Q  374 gctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactg 472  Q
    ||||||||| ||||||||||||| ||||| ||||||| || || ||||| || || |||||| |||||| ||||| |||||||||||||||||||||  |    
T  25969372 gctaccaagccaggaaggaaatccactagggtagtccttattctatagcccttagaaaactcatcgtttacactatatgacctaggacctacccgtatag 25969471  T
Q  473 aatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    | || ||||||||||||||||||||||||||| ||| |||||    
T  25969472 acttcaacctaggaactcctagatctgagatcccatatcact 25969513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 374 - 514
Target Start/End: Original strand, 25973812 - 25973953
Alignment:
Q  374 gctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactg 472  Q
    ||||||||| ||||||||||||| ||||| ||||||| || || ||||| || || |||||| |||||| ||||| |||||||||||||||||||||  |    
T  25973812 gctaccaagccaggaaggaaatccactagggtagtccttattctatagcccttagaaaactcatcgtttacactatatgacctaggacctacccgtatag 25973911  T
Q  473 aatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    | || ||||||||||||||||||||||||||| ||| |||||    
T  25973912 acttcaacctaggaactcctagatctgagatcccatatcact 25973953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 331 - 514
Target Start/End: Complemental strand, 17528057 - 17527872
Alignment:
Q  331 gagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagc 429  Q
    |||||||||||| |||||| ||| |||   |||||||| | || ||||||||| ||| |||  |||| ||||||||||||| || ||||||| |||||||    
T  17528057 gagtttgttaacccagttcagtgacaaacacacctactattggggctaccaagccagaaagttaatccactagtgtagtccttattcaatagttctcagc 17527958  T
Q  430 aaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||| |||| ||||| |||||||||||||||||| ||  || || ||||||||||||| |||||| |||||  |||||||||    
T  17527957 aaactccttgtttacactatatgacctaggacctacccatatagacttcaacctaggaactcatagatcagagattccatctcact 17527872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 323 - 517
Target Start/End: Complemental strand, 21323453 - 21323259
Alignment:
Q  323 ggcacatagagtttgttaactcagttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatag 421  Q
    |||||| ||||||||||||| || |||||  |||| |||||||| | |||| |||||||| |||||||||||||| ||||||||||||| || || | ||    
T  21323453 ggcacagagagtttgttaacccaattcggcacaac-tcacctacatttgggggctaccaaatcaggaaggaaatccactagtgtagtccttattcta-ag 21323356  T
Q  422 ctctcagcaaactcctcgtttgca-ctaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
     | ||| |||||||||| ||| || ||   || |||||| ||| ||||| ||| || ||||||||||||||||||||||||||||||||||||||||    
T  21323355 ttatcaacaaactcctcatttacaactctagaactaggatctaaccgtattgacttcaacctaggaactcctagatctgagatctcatctcacttcc 21323259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 385 - 514
Target Start/End: Original strand, 19171457 - 19171587
Alignment:
Q  385 aggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaaccta 483  Q
    |||||||||||| ||||||||||||| || |||||| ||||||||||| |||| | ||  |||| |||||||||||||||||||||  || || ||||||    
T  19171457 aggaaggaaatccactagtgtagtccttattcaataactctcagcaaagtccttgcttatactatatgacctaggacctacccgtatagacttcaaccta 19171556  T
Q  484 ggaactcctagatctgagatctcatctcact 514  Q
     |||||||||||||||||||  |||||||||    
T  19171557 tgaactcctagatctgagattccatctcact 19171587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 399 - 514
Target Start/End: Complemental strand, 8465775 - 8465660
Alignment:
Q  399 ctagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatct 498  Q
    |||||||||||| || || |||||||||||||||||||   ||| |||||| |||||||||||||||||||  || || || || |||||||||||||||    
T  8465775 ctagtgtagtccttactctatagctctcagcaaactccaaatttacactaaagacctaggacctacccgtatagacttcaatcttggaactcctagatct 8465676  T
Q  499 gagatctcatctcact 514  Q
    |||||| |||||||||    
T  8465675 gagatcccatctcact 8465660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 374 - 514
Target Start/End: Original strand, 11960512 - 11960654
Alignment:
Q  374 gctaccaagtcaggaaggaaatcaactagtgtagtccgtaat-caatagctctcagcaaactcctcgtttgca-ctaatgacctaggacctacccgtact 471  Q
    ||||||||| || |||||||||| | ||||||||||  | || | | || |||||||||||||||||||| || || | ||||||||||||||||||       
T  11960512 gctaccaagccacgaaggaaatctattagtgtagtcttttattctaaagttctcagcaaactcctcgtttacaactgaagacctaggacctacccgtcta 11960611  T
Q  472 gaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    || || |||||||||||||||| |||||| |||||||||||||    
T  11960612 gacttcaacctaggaactcctacatctgatatctcatctcact 11960654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 375 - 468
Target Start/End: Complemental strand, 13870493 - 13870399
Alignment:
Q  375 ctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgt 468  Q
    |||||||| ||||||||||||| ||||||||||||| || ||||||||||||| ||| ||| | |||| ||||| |||||| |||||||||||||    
T  13870493 ctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcatcaagctcattgtttacactatatgaccgaggacctacccgt 13870399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 333 - 395
Target Start/End: Original strand, 12464156 - 12464219
Alignment:
Q  333 gtttgttaactcagttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaat 395  Q
    ||||||||||||||||||||||||| |||||||| | ||||||||||| |||||||||||||||    
T  12464156 gtttgttaactcagttcggtgcaacttcacctacatgtgggagctaccgagtcaggaaggaaat 12464219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 458 - 517
Target Start/End: Complemental strand, 18152750 - 18152691
Alignment:
Q  458 gacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    |||||||| | ||||| || ||||||||||||||||||||||||||||||||||||||||    
T  18152750 gacctacctgcactgacttcaacctaggaactcctagatctgagatctcatctcacttcc 18152691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 451 - 517
Target Start/End: Complemental strand, 20765045 - 20764979
Alignment:
Q  451 gacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    ||||||||||||||||||  ||| || |||||| |||||| ||||||||||||||||||||||||||    
T  20765045 gacctaggacctacccgtcttgacttcaacctaagaactcttagatctgagatctcatctcacttcc 20764979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 360 - 517
Target Start/End: Original strand, 30424952 - 30425109
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgca-ctaatgacctagg 458  Q
    |||||||||| || ||||||||| || |||||||||| | ||||||| | | || || | || ||||||||||||||  |||| || ||   ||||||||    
T  30424952 cacctactctaggggctaccaagccaagaaggaaatccattagtgtaattcttattcta-agttctcagcaaactccaagtttacaactctagacctagg 30425050  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    ||||||  ||| ||| || |||||||||||| ||||||||||||||  |||||||||||    
T  30425051 acctacttgtattgacttcaacctaggaacttctagatctgagatcctatctcacttcc 30425109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 263
Target Start/End: Complemental strand, 15035184 - 15035109
Alignment:
Q  189 tgaaattctggcacgttagacttaagatgttctataagattttc-aacacaagttatacag-aaacagatgttgaat 263  Q
    |||||||||||||||||||||||||||||||||| | ||| ||| ||||| ||||| |||| |||||||||||||||    
T  15035184 tgaaattctggcacgttagacttaagatgttctacacgatgttcaaacac-agttacacagaaaacagatgttgaat 15035109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 331 - 407
Target Start/End: Original strand, 25782798 - 25782875
Alignment:
Q  331 gagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtag 407  Q
    |||||||||||| |||||||||| |||   ||||||||||||  ||||||||| ||| ||||||||| ||||||||||    
T  25782798 gagtttgttaacccagttcggtgacaaacacacctactctggaggctaccaagccagtaaggaaatccactagtgtag 25782875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 189 - 263
Target Start/End: Complemental strand, 15003490 - 15003414
Alignment:
Q  189 tgaaattctggcacgttagacttaagatgttctataagattttc-aacacaagttatacag-aaacagatgttgaat 263  Q
    |||||||||||||| ||||||||||||| ||||| | ||| ||| ||||| ||||| |||| |||||||||||||||    
T  15003490 tgaaattctggcacattagacttaagatattctacacgatgttcaaacaccagttacacagaaaacagatgttgaat 15003414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 391 - 466
Target Start/End: Complemental strand, 19894732 - 19894656
Alignment:
Q  391 gaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctaccc 466  Q
    ||||| ||| |||||||||| || ||||||||||||| |||| |||| |||| || || ||||||||||||||||||    
T  19894732 gaaataaacaagtgtagtccttattcaatagctctcatcaaattccttgtttacattatatgacctaggacctaccc 19894656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 401
Target Start/End: Complemental strand, 22885305 - 22885237
Alignment:
Q  334 tttgttaactcagttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaatcaacta 401  Q
    ||||||||| |||| |||||||||||||||||| |||||| ||  ||||| ||||||||||||| ||||    
T  22885305 tttgttaacccagtacggtgcaacgtcacctacatctgggggcatccaagccaggaaggaaatctacta 22885237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 530
Target Start/End: Original strand, 32452131 - 32452175
Alignment:
Q  486 aactcctagatctgagatctcatctcacttccttacaactgatca 530  Q
    ||||||||||||||||||| ||||||||| |||||||| ||||||    
T  32452131 aactcctagatctgagatcccatctcactcccttacaaatgatca 32452175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 401
Target Start/End: Complemental strand, 3904834 - 3904767
Alignment:
Q  334 tttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaacta 401  Q
    |||||||||  ||||||||| |||||| |||||  | || ||||||||| ||||||||||||||||||    
T  3904834 tttgttaacctagttcggtgaaacgtcccctacgtttggggctaccaagccaggaaggaaatcaacta 3904767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 189 - 223
Target Start/End: Complemental strand, 12445040 - 12445006
Alignment:
Q  189 tgaaattctggcacgttagacttaagatgttctat 223  Q
    |||||||||| ||||||||||||||||||||||||    
T  12445040 tgaaattctgacacgttagacttaagatgttctat 12445006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 514
Target Start/End: Original strand, 19100006 - 19100070
Alignment:
Q  449 atgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||||| ||||||||  || || |||||||||||| ||| |||||||||| |||||||||    
T  19100006 atgacctaggac-tacccgtatagacttcaacctaggaacttctacatctgagatcccatctcact 19100070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 222
Target Start/End: Original strand, 32449094 - 32449127
Alignment:
Q  189 tgaaattctggcacgttagacttaagatgttcta 222  Q
    ||||||||||||||||||| ||||||||||||||    
T  32449094 tgaaattctggcacgttagtcttaagatgttcta 32449127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 153; Significance: 8e-81; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 314 - 538
Target Start/End: Original strand, 29565983 - 29566206
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgta 413  Q
    |||| ||||||||||  |||||||||||||||||||| ||||||||| ||||||||||| ||||||||| ||||||||||||| ||||||||||||| ||    
T  29565983 aaagaaaatggcacagtgagtttgttaactcagttcgatgcaacgtcccctactctggg-gctaccaagccaggaaggaaatccactagtgtagtcctta 29566081  T
Q  414 atcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcac 513  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||| ||||||||    
T  29566082 ttcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgacttcaacctagaaactcctagatctgagatcccatctcac 29566181  T
Q  514 ttccttacaactgatcatagcccct 538  Q
    | |||||||| |||||| |||||||    
T  29566182 tcccttacaaatgatcacagcccct 29566206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 331 - 536
Target Start/End: Original strand, 18765663 - 18765869
Alignment:
Q  331 gagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagca 430  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||| || |||||||||||||| |    
T  18765663 gagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagta 18765762  T
Q  431 aactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttccttacaactgatc 529  Q
    |||||||||||||||||| |||||||||||| |||||||||| | || ||||||||||||| ||||||||||||| ||||||| | | |||||||| |||    
T  18765763 aactcctcgtttgcactatatgacctaggacttacccgtactaacttcaacctaggaactcgtagatctgagatcccatctcattccattacaactaatc 18765862  T
Q  530 atagccc 536  Q
    | |||||    
T  18765863 acagccc 18765869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 314 - 536
Target Start/End: Complemental strand, 13315155 - 13314932
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggag-ctaccaagtcaggaaggaaatcaactagtgtagtccgt 412  Q
    |||| |||||||| |  |||||||||||| ||||||||||||| |||||||||| |||| | |||| ||| ||||||| ||||| ||||||||||||| |    
T  13315155 aaagaaaatggcaaagtgagtttgttaacccagttcggtgcaatgtcacctactatggggggctactaagccaggaagaaaatccactagtgtagtcctt 13315056  T
Q  413 aatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctca 512  Q
    | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || | |||||||||||||||||||||| |||||||    
T  13315055 attcaagagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgacttcaatcaaggaactcctagatctgagatcccatctca 13314956  T
Q  513 cttccttacaactgatcatagccc 536  Q
    || |||| ||| |||||| |||||    
T  13314955 ctcccttccaaatgatcacagccc 13314932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 367 - 514
Target Start/End: Complemental strand, 26860432 - 26860284
Alignment:
Q  367 tctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacc 465  Q
    |||||| ||||||||| ||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  26860432 tctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacctacc 26860333  T
Q  466 cgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||  || || |||||||||||||||||||||||||||||||||||||    
T  26860332 cgtatagatttcaacctaggaactcctagatctgagatctcatctcact 26860284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 331 - 514
Target Start/End: Complemental strand, 24790331 - 24790146
Alignment:
Q  331 gagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagc 429  Q
    ||||||||| || |||||||||| |||   ||||||||||||| ||||||||||||||||||||||| ||||| ||||||| || |||||| ||||||||    
T  24790331 gagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagtcaggaaggaaatccactagagtagtccttattcaatatctctcagc 24790232  T
Q  430 aaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||||| ||||| |||||||||||||||||||||  || || ||||||||||||||||||||||||||| ||| |||||    
T  24790231 aaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatatcact 24790146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 314 - 514
Target Start/End: Complemental strand, 19466712 - 19466511
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtgc-aacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgt 412  Q
    ||||||||||||||   |||||| ||||| ||||||||||  ||   ||||||||||||| ||||||||| ||||||||||||| ||||||||||||| |    
T  19466712 aaagtaaatggcacggtgagtttcttaacccagttcggtgataaacacacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcctt 19466613  T
Q  413 aatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctca 512  Q
    | || ||||||||||| ||||||||| ||| |||||| ||||||||||||||||||| | | || |||||||||||||||||||||||||||  ||||||    
T  19466612 attctatagctctcagaaaactcctcatttacactaaagacctaggacctacccgtattaatttcaacctaggaactcctagatctgagatccaatctca 19466513  T
Q  513 ct 514  Q
    ||    
T  19466512 ct 19466511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 331 - 514
Target Start/End: Original strand, 23758612 - 23758797
Alignment:
Q  331 gagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagc 429  Q
    ||||||||| || |||||||||| |||   || |||||||||| ||||||||| ||||||||||||| ||||||||||||| || ||||||| ||||| |    
T  23758612 gagtttgttgacccagttcggtgacaaacacaactactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagttctcaac 23758711  T
Q  430 aaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||||| ||||| |||||||||||||||||||||  || || ||||||||||||||||||||||||||| |||||||||    
T  23758712 aaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcact 23758797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 331 - 514
Target Start/End: Complemental strand, 36398967 - 36398782
Alignment:
Q  331 gagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagc 429  Q
    ||||||||| || |||||||||| |||   ||||||||||||| ||||||||| ||||||||||||| ||||||||||||| || |||| ||||||||||    
T  36398967 gagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaaaagctctcagc 36398868  T
Q  430 aaactcctcgtttgcac-taatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||||| ||| | ||||||||||||||||||||   || || ||||||||||||||||||||||||||| |||||||||    
T  36398867 aaactcctcgtttacactttatgacctaggacctacccgtctagacttcaacctaggaactcctagatctgagatcccatctcact 36398782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 361 - 514
Target Start/End: Original strand, 12910507 - 12910661
Alignment:
Q  361 acctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctagga 459  Q
    |||||||||||| ||||||||| ||||||||||||| || |||||||||| || ||||||||| ||||||||||| |||||| ||||| ||| |||||||    
T  12910507 acctactctgggggctaccaagccaggaaggaaatccacaagtgtagtccttattcaatagctttcagcaaactcgtcgtttacactatatggcctagga 12910606  T
Q  460 cctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||  || || ||||||||||||||||||||||||||| |||||||||    
T  12910607 cctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcact 12910661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 385 - 514
Target Start/End: Original strand, 22610934 - 22611064
Alignment:
Q  385 aggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaaccta 483  Q
    |||||||||||| ||||||||||||| || |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||  || || ||||||    
T  22610934 aggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatagacttcaaccta 22611033  T
Q  484 ggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||||||||||||| |||||||||    
T  22611034 ggaactcctagatctgagatcccatctcact 22611064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 314 - 514
Target Start/End: Original strand, 21530355 - 21530555
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgt 412  Q
    |||||||||||||||  ||||||||| |  |||||||||| |||     |||||||| || ||||||||| || |||||||||| ||||||||||| | |    
T  21530355 aaagtaaatggcacaacgagtttgtttatccagttcggtgacaaacatgcctactctaggggctaccaagccaagaaggaaatccactagtgtagttctt 21530454  T
Q  413 aatcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctca 512  Q
    | || ||||||||||||||| ||||||||| | |||| ||||||||||||| || || ||| || ||| |||||||||||| |||||||||| |||||||    
T  21530455 attctatagctctcagcaaattcctcgtttacgctaaagacctaggaccta-ccatattgatttcaacttaggaactcctaaatctgagatcccatctca 21530553  T
Q  513 ct 514  Q
    ||    
T  21530554 ct 21530555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 360 - 516
Target Start/End: Original strand, 27111097 - 27111252
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgca-ctaatgacctagg 458  Q
    ||||||||||||| ||||||||| |||||||||| || ||||||||||||| || || | || |||||||||||| |  |||| || || | || |||||    
T  27111097 cacctactctggg-gctaccaagccaggaaggaagtccactagtgtagtccttattcta-agttctcagcaaacttcaagtttacaacttaagaactagg 27111194  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttc 516  Q
    ||||||||||||| | || |||||||||||||||||||||||||||||||||||||||    
T  27111195 acctacccgtacttacttcaacctaggaactcctagatctgagatctcatctcacttc 27111252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 360 - 512
Target Start/End: Complemental strand, 20649699 - 20649547
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgca-ctaatgacctagg 458  Q
    |||||||||| || ||||| ||||||||||||||||| ||||||||||||| |  || | || ||| ||||||||||  |||| || || || |||||||    
T  20649699 cacctactctaggggctacaaagtcaggaaggaaatccactagtgtagtccttgttcta-agttcttagcaaactccaagtttacaacttatcacctagg 20649601  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctca 512  Q
    ||||||||||||||  || ||||||||||||||||||| |||||||||||||||    
T  20649600 acctacccgtactggcttcaacctaggaactcctagatttgagatctcatctca 20649547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 335 - 517
Target Start/End: Original strand, 31587467 - 31587649
Alignment:
Q  335 ttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaac 433  Q
    |||||||| |||||||||| |||   |||||||||||| |||||||||| ||||||||||||| ||||||||||||| || || | || |||||||||||    
T  31587467 ttgttaacccagttcggtgacaaacacacctactctgg-agctaccaagccaggaaggaaatccactagtgtagtccttattcta-agttctcagcaaac 31587564  T
Q  434 tcctcgtttgc-actaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    |||  |||| | |||   ||||||||||||||  ||| ||| || ||||||||||||||||||||| |||||||||| |||||||    
T  31587565 tccaagtttacaactctagacctaggacctacatgtattgacttcaacctaggaactcctagatcttagatctcatcccacttcc 31587649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 334 - 447
Target Start/End: Original strand, 15328299 - 15328412
Alignment:
Q  334 tttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaac 433  Q
    ||||||||| ||||||||||||| || |||||||||||| ||||||||| || |||||||||| | ||||||||||| || |||| |||||| |||||||    
T  15328299 tttgttaacccagttcggtgcaatgttacctactctgggggctaccaagccaagaaggaaatccattagtgtagtccttattcaaaagctctaagcaaac 15328398  T
Q  434 tcctcgtttgcact 447  Q
    ||||| ||| ||||    
T  15328399 tcctcatttacact 15328412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 333 - 517
Target Start/End: Complemental strand, 24317361 - 24317174
Alignment:
Q  333 gtttgttaactcagttcggtg-caacgtcacctac-tctgggag-ctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagc 429  Q
    ||||||||||||||||||||| |||   ||||||| |||||| | ||||||||| |  ||||||||| ||||||||||||| || || | || ||||| |    
T  24317361 gtttgttaactcagttcggtgacaaacacacctacatctggggggctaccaagttataaaggaaatccactagtgtagtccttattcta-agttctcaac 24317263  T
Q  430 aaactcctcgtttgca-ctaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    ||||||||||||| || ||   ||||||||||||||||||| ||| || || |||||||||||||||||||||||| ||||| ||||||    
T  24317262 aaactcctcgtttacaactctagacctaggacctacccgtattgacttcaaactaggaactcctagatctgagatcccatctaacttcc 24317174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 367 - 517
Target Start/End: Complemental strand, 24317945 - 24317795
Alignment:
Q  367 tctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgca-ctaatgacctaggacctacc 465  Q
    |||||| | ||||||| ||||||||||||| ||||||||||||| || || | || ||||||||||||||| ||||  | ||   |||||||||||||||    
T  24317945 tctgggggttaccaagccaggaaggaaatccactagtgtagtccttattcta-agttctcagcaaactcctggtttataactctagacctaggacctacc 24317847  T
Q  466 cgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    | || ||| || |||||||||| ||||||||||| |||| ||||||||||||    
T  24317846 catattgacttcaacctaggaagtcctagatctgtgatcgcatctcacttcc 24317795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 389 - 515
Target Start/End: Original strand, 27107556 - 27107682
Alignment:
Q  389 aggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgca-ctaatgacctaggacctacccgtactgaatttaacctaggaa 487  Q
    |||||||| |||| |||||||| || || | || ||||||||||||||  |||| || || | ||||||||||||||||||||||| || ||||||||||    
T  27107556 aggaaatccactattgtagtccttattcta-agttctcagcaaactccaagtttacaacttaagacctaggacctacccgtactgacttcaacctaggaa 27107654  T
Q  488 ctcctagatctgagatctcatctcactt 515  Q
    ||||||||| ||||||||| ||||||||    
T  27107655 ctcctagatttgagatctcgtctcactt 27107682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 360 - 517
Target Start/End: Complemental strand, 19198420 - 19198264
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgca-ctaatgacctagg 458  Q
    ||||||||||||| |||| |||| ||||||||||||| ||||||||||||| |  || | || ||||||||||||||  |||   | || || ||||| |    
T  19198420 cacctactctggg-gctatcaagccaggaaggaaatccactagtgtagtccttgttcta-agttctcagcaaactccgagttccaaacttataacctaag 19198323  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    |||||||||| |||| || ||||||||||| ||||||||||||||| ||||||||||||    
T  19198322 acctacccgttctgacttcaacctaggaacgcctagatctgagatcccatctcacttcc 19198264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 377 - 515
Target Start/End: Complemental strand, 20475401 - 20475263
Alignment:
Q  377 accaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgca-ctaatgacctaggacctacccgtactgaat 475  Q
    |||||| |||||| |||||  ||||||||||||| || |   ||| ||||||||||||||  |||| || || || |||||||||||||||||| ||| |    
T  20475401 accaagccaggaaagaaattcactagtgtagtcc-tagttcttagttctcagcaaactccaagtttacaacttatcacctaggacctacccgtattgact 20475303  T
Q  476 ttaacctaggaactcctagatctgagatctcatctcactt 515  Q
    | ||||||||| ||||||||||||||||| ||||||||||    
T  20475302 tcaacctaggagctcctagatctgagatcccatctcactt 20475263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 364 - 517
Target Start/End: Complemental strand, 20476715 - 20476562
Alignment:
Q  364 tactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgca-ctaatgacctaggacct 462  Q
    |||| |||| |||||||||  |||||||||||  ||| ||||||||| || |   ||| ||||||||||||||  |||| || || || |||||||||||    
T  20476715 tactttgggggctaccaagctaggaaggaaattcactggtgtagtcc-tagttcttagttctcagcaaactccaagtttacaacttatcacctaggacct 20476617  T
Q  463 acccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    ||||||| ||| || ||||||| ||||| ||||||||||||| ||||||||||||    
T  20476616 acccgtattgacttcaacctagaaactcttagatctgagatcccatctcacttcc 20476562  T

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Target: chr2; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 360 - 517
Target Start/End: Original strand, 25347210 - 25347367
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgca-ctaatgacctagg 458  Q
    ||||||||||||| ||||||||| ||| ||||||| | ||||||||||||| || || | || ||| ||||||||||  |||| || || | || |||||    
T  25347210 cacctactctgggggctaccaagccagaaaggaaacccactagtgtagtccttattcta-agttcttagcaaactccaagtttacaacttaagaactagg 25347308  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    ||||||||||||| | || |||||| |||||||| ||||| ||||| || |||||||||    
T  25347309 acctacccgtactaacttcaacctatgaactcctcgatctaagatcccagctcacttcc 25347367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 334 - 517
Target Start/End: Original strand, 12952462 - 12952646
Alignment:
Q  334 tttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaa 432  Q
    ||||||||| |||||||||| |||   |||||||| |||  ||||||||||||||||||||||| ||||||||||||| || |    || | ||||||||    
T  12952462 tttgttaacccagttcggtgacaaacacacctactatggaggctaccaagtcaggaaggaaatccactagtgtagtcc-tagttctaagttatcagcaaa 12952560  T
Q  433 ctcctcgtttgc-actaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    ||||  |||| | ||| || | ||||   ||||||||||||| || ||||||||| |||||||| |||||||| ||||||||||||    
T  12952561 ctccaagtttacaacttatcatctagacactacccgtactgacttcaacctaggagctcctagacctgagatcccatctcacttcc 12952646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 334 - 517
Target Start/End: Complemental strand, 24283698 - 24283514
Alignment:
Q  334 tttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaa 432  Q
    |||||||| ||||||||||| |||   |||||| |||||| ||||||||||||||||||||||| |||||||||||||    || || | ||||||||||    
T  24283698 tttgttaattcagttcggtgacaaacacacctattctgggggctaccaagtcaggaaggaaatctactagtgtagtcctagttctat-gttctcagcaaa 24283600  T
Q  433 ctcctcgtttgc-actaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    ||||  |||||| ||| || |||| |   ||||||||||||| || ||||||| ||||||||   || ||||| ||||||||||||    
T  24283599 ctccaagtttgcaacttatcaccttgacactacccgtactgacttcaacctagaaactcctaagccttagatcccatctcacttcc 24283514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 360 - 514
Target Start/End: Complemental strand, 21250339 - 21250186
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgca-ctaatgacctagg 458  Q
    ||||||||||||| |||||||||  ||||||||||||   ||||||||||  || |  | || |||||| ||||  | ||||| || || | ||||||||    
T  21250339 cacctactctgggggctaccaagctaggaaggaaatccgttagtgtagtcgttattttaaagttctcagtaaac--cacgtttacaacttaagacctagg 21250242  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||   || || ||||||||| |||||||||||||||||||||||||||    
T  21250241 acctacccgtctagacttcaacctaggatctcctagatctgagatctcatctcact 21250186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 401
Target Start/End: Complemental strand, 31067654 - 31067586
Alignment:
Q  334 tttgttaactcagttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaatcaacta 401  Q
    |||||||||  |||| ||||||||||||||||| |||||| |||||||| |||||||||||||| ||||    
T  31067654 tttgttaacctagtttggtgcaacgtcacctacgtctgggggctaccaattcaggaaggaaatccacta 31067586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 189 - 222
Target Start/End: Complemental strand, 13315289 - 13315256
Alignment:
Q  189 tgaaattctggcacgttagacttaagatgttcta 222  Q
    ||||||||||||||||||||||||||||||||||    
T  13315289 tgaaattctggcacgttagacttaagatgttcta 13315256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 189 - 222
Target Start/End: Original strand, 18765511 - 18765544
Alignment:
Q  189 tgaaattctggcacgttagacttaagatgttcta 222  Q
    ||||||||||||||||||||||||||||||||||    
T  18765511 tgaaattctggcacgttagacttaagatgttcta 18765544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 395
Target Start/End: Original strand, 17363507 - 17363569
Alignment:
Q  334 tttgttaactcagttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaat 395  Q
    |||||| || |||||||||||||| |||||||| |||||| | |||||||||||||| |||||    
T  17363507 tttgttgacccagttcggtgcaacctcacctacatctgggggttaccaagtcaggaatgaaat 17363569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 346 - 395
Target Start/End: Complemental strand, 20378382 - 20378332
Alignment:
Q  346 gttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaat 395  Q
    |||||||||||| |||||||| |||||||||||||||| ||||||| ||||    
T  20378382 gttcggtgcaacttcacctacatctgggagctaccaagccaggaagaaaat 20378332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 401
Target Start/End: Complemental strand, 8163142 - 8163074
Alignment:
Q  334 tttgttaactcagttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaatcaacta 401  Q
    ||||||||| ||||||| ||||| ||||| ||| ||| || ||||||||||||||||| ||||| ||||    
T  8163142 tttgttaacacagttcgatgcaatgtcacgtacgtcttggggctaccaagtcaggaagaaaatccacta 8163074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 189 - 288
Target Start/End: Original strand, 29565850 - 29565950
Alignment:
Q  189 tgaaattctggcacgttagacttaagatgttctataagat-tttcaacacaagttatacagaaacagatgttgaatgaaatgtttcgaacactaagctaa 287  Q
    ||||||||| ||||||||||||||||||||| ||   ||| || |||||| ||||| ||||||| | ||||||||| | ||| |  ||||| ||||||||    
T  29565850 tgaaattctagcacgttagacttaagatgttttacgcgatgttccaacaccagttacacagaaaaaaatgttgaataagatgatcagaacattaagctaa 29565949  T
Q  288 c 288  Q
    |    
T  29565950 c 29565950  T

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Target: scaffold0143 (Bit Score: 134; Significance: 2e-69; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 314 - 547
Target Start/End: Original strand, 36268 - 36500
Alignment:
Q  314 aaagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgta 413  Q
    |||| ||| |||||| ||||||||||||  ||||||||||||||||||||||||||||| ||||||||| ||||||| ||||| ||||||||||||| ||    
T  36268 aaagaaaaaggcacagagagtttgttaatccagttcggtgcaacgtcacctactctgggggctaccaagccaggaagaaaatccactagtgtagtcctta 36367  T
Q  414 atcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcac 513  Q
     |||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||| | ||||||||    
T  36368 ttcaaaagctctcagcaaacttctcgtttgcactaatgacctaggacctaccggtactgacttcaacctaggaactcctagatctgaga-cccatctcac 36466  T
Q  514 ttccttacaactgatcatagcccctatgcttctc 547  Q
    | |||||||| | |||| ||||||| || |||||    
T  36467 tcccttacaaataatcacagcccctgtgattctc 36500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 128; Significance: 6e-66; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 331 - 530
Target Start/End: Original strand, 103093 - 103292
Alignment:
Q  331 gagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagca 430  Q
    |||||||||||| |||||| ||||||||||||||||||| || ||||||||| ||||||||||||| ||||||||||||| || ||||||||||| ||||    
T  103093 gagtttgttaacccagttcagtgcaacgtcacctactctaggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctgagca 103192  T
Q  431 aactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttccttacaactgatca 530  Q
    ||||||| |||||||| || ||||||||||||||||||||||| || ||||||||||||||||||||||||||| | ||||||| |||||||| ||||||    
T  103193 aactccttgtttgcaccaaagacctaggacctacccgtactgacttcaacctaggaactcctagatctgagatcccttctcactcccttacaaatgatca 103292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 120; Significance: 4e-61; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 315 - 514
Target Start/End: Complemental strand, 53112 - 52915
Alignment:
Q  315 aagtaaatggcacatagagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaa 414  Q
    ||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||| ||||||| ||||||||||||| ||     
T  53112 aagtaaatggcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccagga-ggaaatccactagtgtagtccttat 53014  T
Q  415 tcaatagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    || ||||||||||||||||||||||||| |||||| ||||||||||||||||||  ||  || ||||||||||||||||||||||||||| |||||||||    
T  53013 tctatagctctcagcaaactcctcgtttacactaaagacctaggacctacccgt-ttggtttcaacctaggaactcctagatctgagatcccatctcact 52915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 439 - 510
Target Start/End: Complemental strand, 45929 - 45858
Alignment:
Q  439 gtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatct 510  Q
    |||| |||||| ||||||||||||||||||| ||| || |||||| |||||||| ||||||||||| |||||    
T  45929 gtttccactaaagacctaggacctacccgtattgacttcaacctaagaactccttgatctgagatcccatct 45858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 105; Significance: 3e-52; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 332 - 530
Target Start/End: Original strand, 3111 - 3307
Alignment:
Q  332 agtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagca 430  Q
    ||||||||||  |||||||||| ||||  ||||||||||||  ||||||||| ||||||||||||| ||||||||||| |||| |||| |||||||||||    
T  3111 agtttgttaatccagttcggtgacaaca-cacctactctggaggctaccaagccaggaaggaaatccactagtgtagtacgtattcaacagctctcagca 3209  T
Q  431 aactcctcgtttgcactaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttccttacaactgatca 530  Q
    |||  | |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||| |||||||||  ||||||||||||||    
T  3210 aac--cacgtttgcactaatgacctaggacctacccgtactgatttcaacctaggaactcctagatttgagatcccatctcactctcttacaactgatca 3307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 222
Target Start/End: Original strand, 890 - 923
Alignment:
Q  189 tgaaattctggcacgttagacttaagatgttcta 222  Q
    ||||||| ||||||||||||||||||||||||||    
T  890 tgaaattttggcacgttagacttaagatgttcta 923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 101; Significance: 8e-50; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 331 - 514
Target Start/End: Complemental strand, 16385 - 16201
Alignment:
Q  331 gagtttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagca 430  Q
    |||||||||||| |||||||||||||||||| | ||| |||| ||||||||| ||||||||||||| ||||||||||||| || |||| |||||||| ||    
T  16385 gagtttgttaacccagttcggtgcaacgtcaaccactttgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaaaagctctcaaca 16286  T
Q  431 aactcctcgtttgcac-taatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||| ||| ||| | ||||||||||||||||||||   || || |||||||||||||||||||||||||||||||||||||    
T  16285 aactcctcatttacactttatgacctaggacctacccgtctagacttcaacctaggaactcctagatctgagatctcatctcact 16201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 98; Significance: 5e-48; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 331 - 514
Target Start/End: Original strand, 36992 - 37177
Alignment:
Q  331 gagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagc 429  Q
    ||||||||| || |||||||||| |||   ||||||||||||  ||||||||| ||||||||||||| ||||||||||||| || |||||||||||||||    
T  36992 gagtttgttgacccagttcggtgacaaacacacctactctggaggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagc 37091  T
Q  430 aaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||||| ||| | |||||||||||||||||||||  || || ||||||||||||||||||||||||||| |||||||||    
T  37092 aaactcctcgtttacaccatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcact 37177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 96; Significance: 8e-47; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 360 - 514
Target Start/End: Complemental strand, 25816 - 25661
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctagg 458  Q
    ||||||||||||||||||||||| ||||||||||||| ||| ||||||||| || ||||||||||||| |||||||||||||| ||||| ||||||||||    
T  25816 cacctactctgggagctaccaagccaggaaggaaatccactggtgtagtccttattcaatagctctcaacaaactcctcgtttacactagatgacctagg 25717  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||||  || || |||||| |||||||||||||||||||| |||||||||    
T  25716 acctacccgtatagacttcaacctacgaactcctagatctgagatcccatctcact 25661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 96; Significance: 8e-47; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 364 - 514
Target Start/End: Complemental strand, 110395 - 110244
Alignment:
Q  364 tactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacct 462  Q
    |||||| || ||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  110395 tactctaggggctaccaagtcaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacct 110296  T
Q  463 acccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||  || || ||||||||||||||||||| ||||||| |||||||||    
T  110295 acccgtatagacttcaacctaggaactcctagatttgagatcccatctcact 110244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 360 - 514
Target Start/End: Original strand, 40351 - 40506
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcac-taatgacctagg 458  Q
    ||||||||||||| |||||||||  |||||||||||| ||||||||||||| || |||| ||||||||||||||||||||||| ||| | ||||||||||    
T  40351 cacctactctgggggctaccaagctaggaaggaaatccactagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctagg 40450  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||| |||  ||||| ||||||||||||||||||||||||||| |||||||||    
T  40451 acctaccagtatagaattcaacctaggaactcctagatctgagatcccatctcact 40506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 91; Significance: 8e-44; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 360 - 514
Target Start/End: Complemental strand, 17420 - 17266
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctagga 459  Q
    ||||||||||||| ||||||||||||||||| ||||| ||||||||||||| || || ||||||||||||||| ||||||||  |||||| |||||||||    
T  17420 cacctactctgggggctaccaagtcaggaagaaaatccactagtgtagtccttattctatagctctcagcaaattcctcgttaacactaaagacctagga 17321  T
Q  460 cctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||  || || ||||||| ||||| |||||||||||||||||||||||    
T  17320 cctacccgtatagacttcaacctagaaactcttagatctgagatctcatctcact 17266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 83; Significance: 5e-39; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 360 - 514
Target Start/End: Original strand, 26421 - 26575
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctagga 459  Q
    |||||||| |||| |||||||||  |||||||||||| ||||||||||||| || ||  ||||||||| |||||||||| ||| |||||| |||||||||    
T  26421 cacctactatgggggctaccaagcaaggaaggaaatccactagtgtagtccttattctgtagctctcaacaaactcctcatttacactaaagacctagga 26520  T
Q  460 cctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||| ||| || ||||||||||||||||||||||| ||| |||||||||    
T  26521 cctacccgtattgatttcaacctaggaactcctagatctgacatcccatctcact 26575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 80; Significance: 3e-37; HSPs: 3)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 364 - 514
Target Start/End: Complemental strand, 61612 - 61461
Alignment:
Q  364 tactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacct 462  Q
    ||||||||| ||||||||| || |||||||||| ||||||||||| | || ||||||||||||||||||||| | |||| ||||| |||||||| |||||    
T  61612 tactctgggggctaccaagccaagaaggaaatccactagtgtagttcttattcaatagctctcagcaaactcattgtttacactatatgacctaagacct 61513  T
Q  463 acccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||  || || ||||||||||||||||||||||||||| |||||||||    
T  61512 acccgtatagacttcaacctaggaactcctagatctgagatcccatctcact 61461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 309 - 463
Target Start/End: Complemental strand, 50286 - 50130
Alignment:
Q  309 acataaaagtaaatggcacatagagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtag 407  Q
    |||| |||||||||  ||||  ||||||||| || |||||||||| |||   |||||||||| || ||||||||||||||||||||||| ||||||||||    
T  50286 acatgaaagtaaataacacaatgagtttgttgacccagttcggtgacaaacacacctactctaggggctaccaagtcaggaaggaaatccactagtgtag 50187  T
Q  408 tccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggaccta 463  Q
    ||| || ||||||||||||| |||| ||||||||| ||||| |||||||| ||||||    
T  50186 tccttattcaatagctctcaacaaaatcctcgtttacactatatgacctacgaccta 50130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 478 - 514
Target Start/End: Complemental strand, 48368 - 48332
Alignment:
Q  478 aacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||||||||||||| |||||||||||||||    
T  48368 aacctaggaactcctagatctaagatctcatctcact 48332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 79; Significance: 1e-36; HSPs: 3)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 364 - 514
Target Start/End: Complemental strand, 7678 - 7528
Alignment:
Q  364 tactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctaggaccta 463  Q
    |||||| || ||||||||| ||||||||||||  ||||||||||||| || || |||||||||| |||||||||| ||| |||||| |||||||||||||    
T  7678 tactctaggggctaccaagccaggaaggaaattcactagtgtagtccttattctatagctctcaacaaactcctcatttacactaaagacctaggaccta 7579  T
Q  464 cccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||| ||  || || ||||||||||||||||||||||||||| |||||||||    
T  7578 cccatatagacttcaacctaggaactcctagatctgagatcccatctcact 7528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 360 - 514
Target Start/End: Complemental strand, 18269 - 18115
Alignment:
Q  360 cacctactctgggag-ctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctagg 458  Q
    ||||||||||||| | |||| ||| || |||||||||| ||||||||||||| || || |||||||||||||||||||||| || |||||| || |||||    
T  18269 cacctactctggggggctacgaagccaagaaggaaatccactagtgtagtccttattctatagctctcagcaaactcctcgattacactaaaga-ctagg 18171  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||||  || || ||||||||||||||||||||||||||| |||| ||||    
T  18170 acctacccgtatagacttcaacctaggaactcctagatctgagatcccatcacact 18115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 360 - 514
Target Start/End: Complemental strand, 27663 - 27509
Alignment:
Q  360 cacctactctgggag-ctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcactaatgacctagg 458  Q
    ||||||||||||| | |||| ||| || |||||||||| ||||||||||||| || || |||||||||||||||||||||| || |||||| || |||||    
T  27663 cacctactctggggggctacgaagccaagaaggaaatccactagtgtagtccttattctatagctctcagcaaactcctcgattacactaaaga-ctagg 27565  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||||  || || ||||||||||||||||||||||||||| |||| ||||    
T  27564 acctacccgtatagacttcaacctaggaactcctagatctgagatcccatcacact 27509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 385 - 514
Target Start/End: Original strand, 87777 - 87907
Alignment:
Q  385 aggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaaccta 483  Q
    |||||||||||| ||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||   || || |||| |    
T  87777 aggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtctagacttcaaccca 87876  T
Q  484 ggaactcctagatctgagatctcatctcact 514  Q
    ||||||||||||||||||||| |||||||||    
T  87877 ggaactcctagatctgagatcccatctcact 87907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 360 - 514
Target Start/End: Original strand, 36609 - 36764
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctagg 458  Q
    ||||||||||||  |||||||||  |||||||||||| ||||||||||||| || ||||||||||||| |||||||||||||| ||||| ||||||||||    
T  36609 cacctactctggaggctaccaagctaggaaggaaatccactagtgtagtccttattcaatagctctcaacaaactcctcgtttacactatatgacctagg 36708  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||| |||   | || || ||||||||||| |||||||||||| ||| |||||    
T  36709 acctacctgtatatacttcaaactaggaactcccagatctgagatcccatttcact 36764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 71; Significance: 7e-32; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 360 - 509
Target Start/End: Complemental strand, 2501 - 2351
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgacctagg 458  Q
    |||||||| | || |||| |||| |||||||||| || | ||||||||||| || |||||||||||||||||||||| ||||| ||||| ||||||||||    
T  2501 cacctactttaggggctatcaagccaggaaggaagtccaatagtgtagtccttattcaatagctctcagcaaactccccgtttacactatatgacctagg 2402  T
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatc 509  Q
    ||||| |||||  || || ||||||||||||||||||||||||||| ||||    
T  2401 acctagccgtatagacttcaacctaggaactcctagatctgagatcccatc 2351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 331 - 514
Target Start/End: Complemental strand, 16797 - 16612
Alignment:
Q  331 gagtttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagc 429  Q
    ||||||||| ||||||||||||| |||   ||||||||| ||| ||||||||| ||| ||||||||| |||| |||||||| || |||| |||| | |||    
T  16797 gagtttgttgactcagttcggtgacaaacacacctactccgggggctaccaagccagaaaggaaatccactactgtagtccttattcaaaagctataagc 16698  T
Q  430 aaactcctcgtttgcacta-atgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    ||||||||| ||| ||||  |||||||||||||||||||||  || || |||||||||||||||| |||| ||||| |||||||||    
T  16697 aaactcctcatttacactttatgacctaggacctacccgtatagacttcaacctaggaactcctatatctaagatcccatctcact 16612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 374 - 512
Target Start/End: Original strand, 37396 - 37536
Alignment:
Q  374 gctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgc-actaatgacctaggacctacccgtactg 472  Q
    ||||||||||||||||||||||| ||||||||||||| || || | || |||||||||||||||| ||| | ||| | ||||||||||||||||||   |    
T  37396 gctaccaagtcaggaaggaaatccactagtgtagtccttattctaaagttctcagcaaactcctcatttacaacttaagacctaggacctacccgtctag 37495  T
Q  473 aattt-aacctaggaactcctagatctgagatctcatctca 512  Q
    | ||| ||||||||||||||||||| ||||||| |||||||    
T  37496 actttcaacctaggaactcctagatatgagatcccatctca 37536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 335 - 517
Target Start/End: Complemental strand, 10204 - 10021
Alignment:
Q  335 ttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaac 433  Q
    |||||||| |||||||||| |||   ||| |||||| || ||||||||||||| ||||||||| ||||||||||||| ||  | | |  ||||| |||||    
T  10204 ttgttaacccagttcggtgacaaatacacttactcttggggctaccaagtcagaaaggaaatccactagtgtagtccttatacta-acttctcaccaaac 10106  T
Q  434 tcctcgtttgca-ctaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    |||| |||| || ||   ||||||||||||| ||||  ||| || |||| |||||||||||||||||||||||||||||||||||    
T  10105 tccttgtttacaactctagacctaggacctatccgtcttgacttcaaccgaggaactcctagatctgagatctcatctcacttcc 10021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 364 - 541
Target Start/End: Original strand, 202416 - 202592
Alignment:
Q  364 tactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgc-actaatgacctaggacct 462  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||| || || | || |||||| |||   | | ||| | ||| | ||||||||||||    
T  202416 tactctgggggctaccaagtcaggaaggaaatccactagtgtagtccttattctaaagttctcagtaaa--tcacatttacaacttaagacctaggacct 202513  T
Q  463 acccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttccttacaactgatcatagcccctatg 541  Q
    |||| |   || || |||||||||||| |||||||||||||| |||||||||  | ||||||  |||| ||||||||||    
T  202514 acccatctggacttcaacctaggaacttctagatctgagatcccatctcactatcctacaaccaatcacagcccctatg 202592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 360 - 456
Target Start/End: Original strand, 5663 - 5759
Alignment:
Q  360 cacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccgtaatcaatagctctcagcaaactcctcgtttgcacta-atgaccta 456  Q
    |||||||||| || |||||||||  |||||||||||| || |||||||||| || ||||||||||||||||||||| |||||| ||||| ||||||||    
T  5663 cacctactctagg-gctaccaagcaaggaaggaaatccacaagtgtagtccttattcaatagctctcagcaaactcatcgtttacactatatgaccta 5759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 314 - 518
Target Start/End: Original strand, 5388 - 5593
Alignment:
Q  314 aaagtaaatggcacatagagt-ttgttaactcagttcggtg-caacgtcacctactctgggagctaccaagtcaggaaggaaatcaactagtgtagtccg 411  Q
    ||||||||||||||| ||||  |||||||| |||||||||| |||   |||||||||| || |||   ||||||| ||||||||| |||||||||||||     
T  5388 aaagtaaatggcaca-agagaattgttaacccagttcggtgacaaacacacctactctaggggctgttaagtcagaaaggaaatccactagtgtagtcct 5486  T
Q  412 taatcaatagctctcagcaaactcctcgtttgca-ctaatgacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatct 510  Q
    || || | || ||| ||||||||||  |||| || ||   |||||||||| |||| ||  | | || ||||||||||||||||||||||||||| |||||    
T  5487 tattcca-agttctgagcaaactccaagtttacaactctagacctaggacttacctgtcttaacttcaacctaggaactcctagatctgagatcccatct 5585  T
Q  511 cacttcct 518  Q
    ||||||||    
T  5586 cacttcct 5593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 451 - 517
Target Start/End: Original strand, 11296 - 11362
Alignment:
Q  451 gacctaggacctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    ||||||||||||||| ||| ||| || |||||||| |||||||||||||||||| ||||||||||||    
T  11296 gacctaggacctaccggtattgacttcaacctaggtactcctagatctgagatcccatctcacttcc 11362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 461 - 517
Target Start/End: Original strand, 13725 - 13781
Alignment:
Q  461 ctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcacttcc 517  Q
    ||||||||| ||| || ||||||||||||| |||| |||||||||||||||||||||    
T  13725 ctacccgtattgacttcaacctaggaactcatagacctgagatctcatctcacttcc 13781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 401
Target Start/End: Original strand, 18540 - 18607
Alignment:
Q  334 tttgttaactcagttcggtgcaacgtcacctactctgggagctaccaagtcaggaaggaaatcaacta 401  Q
    |||||| || |||||||||||||| ||||||||| | || ||||||||| || |||||||||| ||||    
T  18540 tttgttgacccagttcggtgcaacttcacctacttttggggctaccaagccatgaaggaaatccacta 18607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 396
Target Start/End: Complemental strand, 2247 - 2184
Alignment:
Q  334 tttgttaactcagttcggtgcaacgtcacctac-tctgggagctaccaagtcaggaaggaaatc 396  Q
    |||||| || |||||||||||||| |||||||| |||||| ||||||||| |||||| ||||||    
T  2247 tttgttcacccagttcggtgcaacttcacctacatctgggggctaccaagccaggaaagaaatc 2184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 514
Target Start/End: Complemental strand, 12553 - 12498
Alignment:
Q  459 acctacccgtactgaatttaacctaggaactcctagatctgagatctcatctcact 514  Q
    |||||||||||  || || ||||||| ||||||||||||||||||| |||||||||    
T  12553 acctacccgtatagacttcaacctagaaactcctagatctgagatcccatctcact 12498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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