View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18982_low_40 (Length: 361)

Name: NF18982_low_40
Description: NF18982
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18982_low_40
NF18982_low_40
[»] chr4 (66 HSPs)
chr4 (144-281)||(21433861-21433998)
chr4 (135-292)||(15134570-15134727)
chr4 (134-292)||(16457923-16458080)
chr4 (144-277)||(2247568-2247700)
chr4 (134-303)||(3688560-3688732)
chr4 (132-285)||(45653989-45654140)
chr4 (21-87)||(47129111-47129177)
chr4 (21-86)||(32915510-32915575)
chr4 (21-86)||(55255382-55255447)
chr4 (21-86)||(16845146-16845210)
chr4 (21-86)||(34027703-34027768)
chr4 (21-86)||(54780903-54780968)
chr4 (134-281)||(31758701-31758848)
chr4 (21-86)||(32128709-32128774)
chr4 (23-86)||(5128758-5128821)
chr4 (134-285)||(7403101-7403244)
chr4 (21-86)||(2790659-2790724)
chr4 (21-86)||(17679524-17679589)
chr4 (184-281)||(33414017-33414114)
chr4 (21-86)||(34768492-34768557)
chr4 (21-74)||(38209520-38209573)
chr4 (26-86)||(48209376-48209436)
chr4 (165-281)||(52374931-52375047)
chr4 (21-88)||(23508425-23508492)
chr4 (134-261)||(32286266-32286392)
chr4 (179-281)||(38036251-38036351)
chr4 (21-87)||(1105656-1105722)
chr4 (21-87)||(19498626-19498692)
chr4 (135-201)||(21433967-21434033)
chr4 (25-87)||(24969725-24969787)
chr4 (21-87)||(37777139-37777205)
chr4 (21-86)||(10428116-10428181)
chr4 (21-86)||(16882313-16882378)
chr4 (21-86)||(16922245-16922310)
chr4 (21-86)||(54083160-54083225)
chr4 (226-281)||(19382311-19382366)
chr4 (21-80)||(38352189-38352248)
chr4 (143-201)||(2324745-2324803)
chr4 (190-276)||(2324777-2324863)
chr4 (26-88)||(9578573-9578635)
chr4 (212-262)||(17181275-17181325)
chr4 (134-305)||(41840571-41840743)
chr4 (184-262)||(51578037-51578114)
chr4 (135-201)||(52374896-52374962)
chr4 (21-86)||(40089649-40089714)
chr4 (226-278)||(993234-993286)
chr4 (213-285)||(25592253-25592325)
chr4 (134-201)||(993291-993358)
chr4 (134-201)||(33413981-33414048)
chr4 (21-72)||(43455463-43455514)
chr4 (163-285)||(9023920-9024042)
chr4 (140-294)||(34397400-34397553)
chr4 (21-75)||(35465230-35465284)
chr4 (21-86)||(37514785-37514848)
chr4 (50-87)||(980359-980396)
chr4 (21-86)||(10979027-10979092)
chr4 (235-292)||(21433876-21433933)
chr4 (134-231)||(28987249-28987346)
chr4 (31-87)||(13460305-13460361)
chr4 (21-89)||(35779242-35779310)
chr4 (213-281)||(48791246-48791314)
chr4 (175-278)||(1338448-1338551)
chr4 (134-201)||(15134545-15134612)
chr4 (21-83)||(51964835-51964897)
chr4 (212-286)||(53127971-53128045)
chr4 (235-293)||(41840593-41840653)
[»] chr5 (50 HSPs)
chr5 (134-281)||(3907634-3907779)
chr5 (135-305)||(25545199-25545367)
chr5 (134-281)||(36059187-36059332)
chr5 (135-278)||(22399749-22399892)
chr5 (134-292)||(42420020-42420178)
chr5 (134-305)||(33029472-33029646)
chr5 (21-86)||(15480006-15480071)
chr5 (21-89)||(27079132-27079200)
chr5 (21-78)||(34756289-34756346)
chr5 (21-86)||(36187795-36187860)
chr5 (134-281)||(4190073-4190222)
chr5 (134-280)||(41169405-41169551)
chr5 (21-86)||(7671053-7671118)
chr5 (21-86)||(16198709-16198774)
chr5 (21-82)||(19523319-19523380)
chr5 (21-86)||(31194528-31194593)
chr5 (21-81)||(2275010-2275070)
chr5 (21-89)||(38869276-38869344)
chr5 (21-88)||(22986471-22986538)
chr5 (134-244)||(40927657-40927767)
chr5 (21-90)||(16591986-16592055)
chr5 (21-86)||(16799240-16799305)
chr5 (216-292)||(43461964-43462040)
chr5 (21-86)||(9364411-9364476)
chr5 (24-83)||(30854452-30854511)
chr5 (135-292)||(4158058-4158215)
chr5 (159-280)||(7721338-7721459)
chr5 (21-86)||(23283943-23284008)
chr5 (134-199)||(35244916-35244981)
chr5 (214-263)||(38029572-38029621)
chr5 (21-78)||(40389461-40389518)
chr5 (21-85)||(28822253-28822317)
chr5 (21-89)||(31881345-31881413)
chr5 (21-88)||(27924202-27924269)
chr5 (213-307)||(3416251-3416345)
chr5 (235-285)||(7721402-7721452)
chr5 (135-201)||(17474867-17474933)
chr5 (188-281)||(31273069-31273162)
chr5 (212-282)||(3771222-3771292)
chr5 (163-201)||(13122046-13122084)
chr5 (179-281)||(36945619-36945721)
chr5 (212-277)||(27195308-27195373)
chr5 (229-274)||(35244861-35244906)
chr5 (189-258)||(40530010-40530079)
chr5 (216-273)||(41106466-41106523)
chr5 (235-292)||(41169469-41169526)
chr5 (173-217)||(4158157-4158201)
chr5 (248-292)||(28907371-28907415)
chr5 (248-292)||(28943766-28943810)
chr5 (44-72)||(29143434-29143462)
[»] chr1 (54 HSPs)
chr1 (134-305)||(40668919-40669088)
chr1 (138-292)||(34437601-34437754)
chr1 (151-281)||(2542697-2542827)
chr1 (134-292)||(7444284-7444442)
chr1 (165-293)||(38663651-38663781)
chr1 (21-87)||(44655871-44655937)
chr1 (21-86)||(6771924-6771989)
chr1 (185-294)||(23317910-23318019)
chr1 (21-86)||(27906646-27906711)
chr1 (24-83)||(50881562-50881621)
chr1 (134-303)||(731308-731478)
chr1 (21-87)||(17169086-17169152)
chr1 (21-86)||(14146430-14146495)
chr1 (134-263)||(49403504-49403633)
chr1 (165-281)||(31970129-31970245)
chr1 (21-80)||(34247157-34247216)
chr1 (163-282)||(45563079-45563198)
chr1 (175-293)||(40374056-40374173)
chr1 (21-86)||(5027681-5027746)
chr1 (21-86)||(21740852-21740917)
chr1 (21-80)||(16140185-16140244)
chr1 (135-256)||(49822566-49822688)
chr1 (21-86)||(19955847-19955912)
chr1 (21-86)||(22865378-22865443)
chr1 (26-86)||(9172940-9173000)
chr1 (26-86)||(9180922-9180982)
chr1 (165-281)||(34437607-34437722)
chr1 (21-88)||(40501705-40501772)
chr1 (21-87)||(23185557-23185623)
chr1 (21-86)||(51607358-51607423)
chr1 (21-88)||(4971534-4971601)
chr1 (21-88)||(13913396-13913463)
chr1 (135-201)||(38663630-38663696)
chr1 (134-292)||(939335-939495)
chr1 (21-86)||(6889740-6889805)
chr1 (21-86)||(6891586-6891651)
chr1 (210-261)||(11120317-11120368)
chr1 (24-86)||(3406552-3406614)
chr1 (24-86)||(3440206-3440268)
chr1 (135-280)||(39131544-39131687)
chr1 (21-86)||(5316810-5316875)
chr1 (235-292)||(49822607-49822664)
chr1 (26-86)||(1366797-1366857)
chr1 (171-223)||(5695747-5695799)
chr1 (175-263)||(33422663-33422751)
chr1 (170-281)||(40668943-40669054)
chr1 (21-69)||(41697072-41697120)
chr1 (50-86)||(52127460-52127496)
chr1 (135-197)||(15366480-15366542)
chr1 (235-281)||(38663730-38663776)
chr1 (235-292)||(2542705-2542762)
chr1 (134-199)||(7444259-7444324)
chr1 (248-292)||(16661818-16661862)
chr1 (209-261)||(45925161-45925213)
[»] chr3 (67 HSPs)
chr3 (134-280)||(35357295-35357441)
chr3 (134-275)||(36480685-36480826)
chr3 (134-262)||(14345129-14345257)
chr3 (21-87)||(38681010-38681076)
chr3 (170-282)||(11532449-11532561)
chr3 (169-293)||(31205369-31205495)
chr3 (21-87)||(8073256-8073322)
chr3 (24-86)||(36715942-36716004)
chr3 (21-87)||(54619120-54619186)
chr3 (21-86)||(21582895-21582960)
chr3 (21-86)||(27078486-27078551)
chr3 (21-86)||(27084283-27084348)
chr3 (21-86)||(47467807-47467872)
chr3 (185-292)||(32881000-32881107)
chr3 (163-262)||(37341257-37341355)
chr3 (165-276)||(40554057-40554168)
chr3 (135-294)||(3901498-3901652)
chr3 (24-86)||(29620364-29620426)
chr3 (21-87)||(37168490-37168556)
chr3 (21-87)||(42098924-42098990)
chr3 (24-85)||(3953816-3953877)
chr3 (21-86)||(54407073-54407138)
chr3 (135-281)||(36480721-36480867)
chr3 (21-83)||(36606087-36606149)
chr3 (185-294)||(48543411-48543520)
chr3 (21-86)||(50939152-50939217)
chr3 (229-281)||(3901566-3901618)
chr3 (185-281)||(40763397-40763493)
chr3 (26-86)||(43207157-43207217)
chr3 (165-263)||(19158691-19158788)
chr3 (163-281)||(29955052-29955170)
chr3 (163-281)||(30004206-30004324)
chr3 (21-87)||(44708599-44708665)
chr3 (21-91)||(50258537-50258607)
chr3 (165-278)||(19560646-19560759)
chr3 (21-86)||(34290554-34290619)
chr3 (21-86)||(48720429-48720494)
chr3 (229-305)||(13540166-13540242)
chr3 (189-262)||(13777683-13777756)
chr3 (149-262)||(16729206-16729319)
chr3 (21-86)||(53506802-53506866)
chr3 (138-201)||(37189238-37189301)
chr3 (21-80)||(48157251-48157310)
chr3 (21-88)||(53149230-53149297)
chr3 (21-87)||(18372605-18372671)
chr3 (135-201)||(26986272-26986338)
chr3 (135-197)||(31205348-31205410)
chr3 (134-293)||(51541223-51541384)
chr3 (249-294)||(3300724-3300769)
chr3 (132-173)||(36046321-36046362)
chr3 (135-199)||(1458633-1458697)
chr3 (226-262)||(35527127-35527163)
chr3 (209-261)||(48240402-48240453)
chr3 (241-292)||(799263-799314)
chr3 (138-201)||(29955020-29955083)
chr3 (138-201)||(30004174-30004237)
chr3 (134-201)||(32880975-32881042)
chr3 (163-292)||(4276981-4277115)
chr3 (135-201)||(36007449-36007515)
chr3 (213-258)||(1458575-1458620)
chr3 (213-278)||(19554403-19554468)
chr3 (247-293)||(28576454-28576496)
chr3 (255-288)||(36026800-36026833)
chr3 (185-258)||(45332573-45332646)
chr3 (235-263)||(9145449-9145477)
chr3 (134-201)||(29212236-29212304)
chr3 (135-175)||(35415089-35415129)
[»] chr7 (57 HSPs)
chr7 (134-303)||(3235537-3235706)
chr7 (134-281)||(12275718-12275863)
chr7 (163-305)||(2276284-2276426)
chr7 (170-276)||(26862927-26863033)
chr7 (21-86)||(12596207-12596272)
chr7 (21-86)||(18776683-18776748)
chr7 (21-86)||(25010546-25010611)
chr7 (143-294)||(46074042-46074193)
chr7 (155-281)||(10056622-10056748)
chr7 (203-281)||(11201307-11201385)
chr7 (21-86)||(29077339-29077404)
chr7 (21-80)||(40357303-40357362)
chr7 (21-83)||(8171460-8171522)
chr7 (21-86)||(10329327-10329392)
chr7 (21-86)||(20091197-20091262)
chr7 (21-88)||(23550986-23551053)
chr7 (134-199)||(12275834-12275899)
chr7 (21-86)||(24525599-24525664)
chr7 (21-86)||(26254113-26254178)
chr7 (21-86)||(28749830-28749895)
chr7 (21-86)||(48983756-48983821)
chr7 (24-84)||(8239809-8239869)
chr7 (135-201)||(5443623-5443689)
chr7 (135-201)||(5452668-5452734)
chr7 (228-302)||(18089774-18089848)
chr7 (170-263)||(40134402-40134493)
chr7 (163-281)||(49106913-49107030)
chr7 (21-86)||(19692214-19692279)
chr7 (184-281)||(24516570-24516667)
chr7 (21-86)||(47984885-47984950)
chr7 (151-293)||(2417103-2417242)
chr7 (132-203)||(26327737-26327811)
chr7 (134-201)||(49106999-49107066)
chr7 (135-201)||(26863007-26863073)
chr7 (21-86)||(38414793-38414858)
chr7 (184-263)||(640911-640990)
chr7 (135-201)||(40134480-40134544)
chr7 (235-281)||(2276291-2276337)
chr7 (175-293)||(7526137-7526255)
chr7 (228-286)||(29356926-29356984)
chr7 (213-262)||(18802873-18802922)
chr7 (140-281)||(26647675-26647815)
chr7 (138-195)||(31042403-31042460)
chr7 (203-272)||(47497747-47497816)
chr7 (212-292)||(7017142-7017222)
chr7 (212-292)||(7032500-7032580)
chr7 (246-294)||(26862914-26862962)
chr7 (141-205)||(31042124-31042188)
chr7 (134-173)||(22044916-22044955)
chr7 (186-292)||(316389-316495)
chr7 (256-294)||(11201395-11201433)
chr7 (235-281)||(12275752-12275798)
chr7 (207-285)||(38582001-38582079)
chr7 (21-86)||(10955606-10955671)
chr7 (212-261)||(45200484-45200533)
chr7 (235-294)||(36129069-36129129)
chr7 (241-285)||(46074065-46074109)
[»] chr8 (49 HSPs)
chr8 (134-281)||(2288613-2288760)
chr8 (134-281)||(40696202-40696349)
chr8 (21-86)||(2952137-2952202)
chr8 (134-278)||(20271023-20271174)
chr8 (134-278)||(21057651-21057802)
chr8 (21-86)||(3048435-3048500)
chr8 (138-303)||(4994145-4994310)
chr8 (156-281)||(34504377-34504502)
chr8 (21-86)||(37430076-37430141)
chr8 (185-285)||(40175923-40176023)
chr8 (134-262)||(40694591-40694719)
chr8 (185-281)||(42072674-42072770)
chr8 (21-83)||(30883450-30883512)
chr8 (21-88)||(23606546-23606613)
chr8 (170-280)||(26018476-26018584)
chr8 (149-280)||(35586419-35586549)
chr8 (21-83)||(13534609-13534671)
chr8 (21-83)||(13624149-13624211)
chr8 (21-86)||(20003728-20003793)
chr8 (21-86)||(42600902-42600967)
chr8 (21-86)||(45475936-45476001)
chr8 (134-263)||(27072847-27072976)
chr8 (171-305)||(38834990-38835124)
chr8 (21-87)||(23798178-23798244)
chr8 (24-86)||(41879302-41879364)
chr8 (21-86)||(10917510-10917575)
chr8 (212-281)||(13260406-13260475)
chr8 (135-216)||(40566535-40566616)
chr8 (140-262)||(1806152-1806273)
chr8 (21-75)||(5860671-5860725)
chr8 (135-201)||(36009916-36009982)
chr8 (161-285)||(21124956-21125079)
chr8 (134-263)||(8402460-8402585)
chr8 (251-302)||(26018455-26018506)
chr8 (219-278)||(42209424-42209483)
chr8 (135-177)||(1806285-1806327)
chr8 (138-248)||(17893299-17893409)
chr8 (232-276)||(2478494-2478538)
chr8 (140-203)||(9814041-9814102)
chr8 (144-303)||(36914878-36915036)
chr8 (134-201)||(42072640-42072705)
chr8 (215-278)||(9814072-9814135)
chr8 (231-294)||(24306266-24306329)
chr8 (135-173)||(8402598-8402636)
chr8 (146-204)||(13772484-13772542)
chr8 (134-199)||(23848244-23848307)
chr8 (135-216)||(38357548-38357629)
chr8 (231-293)||(40566531-40566595)
chr8 (225-281)||(38357583-38357639)
[»] chr6 (46 HSPs)
chr6 (134-263)||(5706650-5706780)
chr6 (21-87)||(21280668-21280734)
chr6 (21-86)||(13727317-13727382)
chr6 (134-281)||(12731532-12731679)
chr6 (21-88)||(27788606-27788673)
chr6 (134-263)||(11650921-11651051)
chr6 (21-86)||(21479618-21479683)
chr6 (21-86)||(30832443-30832508)
chr6 (207-305)||(3150197-3150297)
chr6 (21-86)||(27314097-27314162)
chr6 (165-262)||(24783899-24783996)
chr6 (134-278)||(4483383-4483527)
chr6 (21-89)||(20711635-20711703)
chr6 (21-85)||(33774241-33774305)
chr6 (226-292)||(1473618-1473684)
chr6 (143-212)||(4033075-4033144)
chr6 (21-86)||(17354077-17354142)
chr6 (134-203)||(17389989-17390058)
chr6 (21-86)||(24710914-24710979)
chr6 (170-281)||(6643329-6643440)
chr6 (143-206)||(17600694-17600757)
chr6 (135-201)||(1473594-1473660)
chr6 (21-89)||(28075909-28075976)
chr6 (135-201)||(9645011-9645077)
chr6 (135-201)||(9651028-9651094)
chr6 (235-273)||(33182274-33182312)
chr6 (135-239)||(4494375-4494477)
chr6 (249-294)||(6643316-6643361)
chr6 (134-199)||(24110041-24110106)
chr6 (226-263)||(28865442-28865479)
chr6 (134-197)||(4483346-4483407)
chr6 (211-263)||(31054686-31054738)
chr6 (134-201)||(479781-479848)
chr6 (21-84)||(1155767-1155830)
chr6 (138-201)||(4787811-4787874)
chr6 (134-199)||(10729959-10730022)
chr6 (21-87)||(19737611-19737676)
chr6 (212-258)||(26328217-26328263)
chr6 (163-201)||(34093906-34093944)
chr6 (21-78)||(235151-235208)
chr6 (135-196)||(31989233-31989294)
chr6 (229-261)||(3625151-3625183)
chr6 (213-302)||(9358210-9358300)
chr6 (134-178)||(19711616-19711660)
chr6 (244-276)||(24110145-24110177)
chr6 (135-199)||(31946914-31946978)
[»] chr2 (56 HSPs)
chr2 (134-279)||(37810124-37810269)
chr2 (21-87)||(4506013-4506079)
chr2 (165-281)||(25666807-25666923)
chr2 (163-303)||(42251153-42251295)
chr2 (147-294)||(1469730-1469879)
chr2 (21-83)||(6965124-6965186)
chr2 (21-86)||(12337365-12337430)
chr2 (134-281)||(16209389-16209536)
chr2 (134-281)||(33069145-33069292)
chr2 (175-293)||(18719733-18719850)
chr2 (21-86)||(8906996-8907061)
chr2 (21-88)||(27506657-27506724)
chr2 (186-281)||(42094233-42094327)
chr2 (169-292)||(44247541-44247664)
chr2 (176-274)||(3466407-3466505)
chr2 (137-259)||(15194516-15194638)
chr2 (21-86)||(1396617-1396682)
chr2 (21-82)||(40636256-40636317)
chr2 (134-262)||(9430170-9430298)
chr2 (21-88)||(24410558-24410625)
chr2 (134-281)||(35714988-35715134)
chr2 (135-294)||(42094208-42094362)
chr2 (163-305)||(4237257-4237399)
chr2 (21-83)||(34694093-34694155)
chr2 (21-83)||(34716505-34716567)
chr2 (21-86)||(3953123-3953188)
chr2 (144-292)||(42029345-42029493)
chr2 (21-88)||(29939779-29939846)
chr2 (24-86)||(3155339-3155401)
chr2 (135-201)||(3466481-3466547)
chr2 (134-292)||(1930673-1930826)
chr2 (163-303)||(33171590-33171731)
chr2 (134-261)||(36283464-36283587)
chr2 (21-80)||(5952642-5952701)
chr2 (24-87)||(7162905-7162968)
chr2 (24-83)||(10762488-10762547)
chr2 (135-205)||(18719712-18719780)
chr2 (134-261)||(41496037-41496164)
chr2 (21-86)||(26716248-26716313)
chr2 (163-256)||(29160848-29160941)
chr2 (135-242)||(12779481-12779587)
chr2 (134-201)||(25666892-25666959)
chr2 (21-87)||(8327736-8327802)
chr2 (235-281)||(33171678-33171724)
chr2 (21-86)||(9046148-9046213)
chr2 (232-296)||(44487152-44487216)
chr2 (235-282)||(17383773-17383820)
chr2 (165-200)||(23001439-23001474)
chr2 (250-305)||(23080399-23080454)
chr2 (226-272)||(6978991-6979037)
chr2 (235-281)||(37810160-37810206)
chr2 (247-293)||(1469739-1469787)
chr2 (140-201)||(12703456-12703517)
chr2 (231-292)||(30841012-30841073)
chr2 (226-278)||(2683446-2683498)
chr2 (245-281)||(12779739-12779775)
[»] scaffold0070 (1 HSPs)
scaffold0070 (21-86)||(1462-1527)
[»] scaffold0039 (1 HSPs)
scaffold0039 (21-86)||(106658-106723)
[»] scaffold0001 (1 HSPs)
scaffold0001 (24-86)||(183182-183244)
[»] scaffold0003 (2 HSPs)
scaffold0003 (179-292)||(136344-136457)
scaffold0003 (135-201)||(136415-136481)
[»] scaffold0620 (1 HSPs)
scaffold0620 (163-201)||(9240-9278)
[»] scaffold0015 (1 HSPs)
scaffold0015 (135-201)||(201051-201117)


Alignment Details
Target: chr4 (Bit Score: 86; Significance: 5e-41; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 144 - 281
Target Start/End: Original strand, 21433861 - 21433998
Alignment:
Q  144 aacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgg 243  Q
    |||||||||||||||| | | ||||||||| |||||||| |||||||||||||||||| ||||| || ||||||||||||| ||||||||||||||||||    
T  21433861 aacacacattttaacacacatttttcaacacactctctttgattggttaaaattcacatgagacccaccaaatttatatgagacccacatgatttggtgg 21433960  T
Q  244 gacccatgtgaattttaaccgattaaagagagtgtgtt 281  Q
    || ||||||||||||||||| || || |||||||||||    
T  21433961 gatccatgtgaattttaaccaatcaatgagagtgtgtt 21433998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 135 - 292
Target Start/End: Complemental strand, 15134727 - 15134570
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatg 234  Q
    ||||||| ||||||||||||||||  | ||||||||||| ||| |||  |||||||||||||||||| | |||||| ||||||||||||  ||||| |||    
T  15134727 aatgctaacaacacacattttaacgcacacttttcaacacactgtctgtgattggttaaaattcacatgggactcaccaaatttatatgggacccaaatg 15134628  T
Q  235 atttggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaaatatgtgt 292  Q
    |||| || ||||||||||||||||||||| || ||||||| |||||| ||| ||||||    
T  15134627 atttagtcggacccatgtgaattttaaccaataaaagagaatgtgttgaaaaatgtgt 15134570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 134 - 292
Target Start/End: Complemental strand, 16458080 - 16457923
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    |||||||||||||||||||| ||||| | ||||||||||| |||||||| ||| | ||||| ||||   ||||| || ||||||||||||  ||||||||    
T  16458080 aaatgctagcaacacacattctaacacacacttttcaacacactctctttgatcgattaaa-ttcatgtgagacccaccaaatttatatgggacccacat 16457982  T
Q  234 gatttggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaaatatgtgt 292  Q
    |||||| ||||| ||||||||||||||||| || ||||||||||||||| || ||||||    
T  16457981 gatttgatgggatccatgtgaattttaaccaatcaaagagagtgtgttagaaaatgtgt 16457923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 144 - 277
Target Start/End: Original strand, 2247568 - 2247700
Alignment:
Q  144 aacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgg 243  Q
    |||||| ||||||||| | ||||||||||| ||||||||  |||| |||||||||||||||||  || ||||||||||||  ||||||||||||||||||    
T  2247568 aacacatattttaacacacacttttcaacacactctctttaattgattaaaattcacacgagatcca-caaatttatatgcgacccacatgatttggtgg 2247666  T
Q  244 gacccatgtgaattttaaccgattaaagagagtg 277  Q
    || |||||| |||||||||| || ||||||||||    
T  2247667 gatccatgttaattttaaccaatcaaagagagtg 2247700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 134 - 303
Target Start/End: Complemental strand, 3688732 - 3688560
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatc-aaatttatatgaaacccaca 232  Q
    |||||||| ||||||||||||||| | | ||||| ||||| ||| |||| |||||||||||||||||| | ||| |||| ||| |||||||  |||||||    
T  3688732 aaatgctaacaacacacattttaatatacactttccaacacactttctttgattggttaaaattcacatgtgacccatctaaaattatatgggacccaca 3688633  T
Q  233 tgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt--aaaatatgtgttgttatcattc 303  Q
    |||||||||| |||||||||||||||||||  || ||||| | ||||||  ||||| |||||||||| |||||    
T  3688632 tgatttggtgagacccatgtgaattttaactaatcaaagaaaatgtgttgaaaaatgtgtgttgttagcattc 3688560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 132 - 285
Target Start/End: Original strand, 45653989 - 45654140
Alignment:
Q  132 ataaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccac 231  Q
    |||||||||||||||||||||  ||||| | ||||||||||| ||||| || ||||||||||| || | | |||||  ||||||||||||||  ||||||    
T  45653989 ataaatgctagcaacacacatcctaacagacacttttcaacacactctttt-gattggttaaattt-atatgagacctatcaaatttatatgggacccac 45654086  T
Q  232 atgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaaa 285  Q
    |||||||| ||||| ||||||||||||||||| || ||| | ||||||||||||    
T  45654087 atgatttgatgggatccatgtgaattttaaccaatcaaaaaaagtgtgttaaaa 45654140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 47129111 - 47129177
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctga 87  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  47129111 ttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggctctga 47129177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 32915510 - 32915575
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  32915510 ttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggccctg 32915575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 55255382 - 55255447
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  55255382 ttgattttatcactggcctcttttcattttcagagccgagcctccgaattctcagggacggccctg 55255447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 16845146 - 16845210
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  16845146 ttgattttatcactggc-ttttttcatttccagagccgagcctccgaattcttagggacggccctg 16845210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 34027703 - 34027768
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||    
T  34027703 ttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagggacggccctg 34027768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 54780903 - 54780968
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||    
T  54780903 ttgattttatcactggcctcttttcattcccagagccaagcctccgaattctcagggacggccctg 54780968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 134 - 281
Target Start/End: Complemental strand, 31758848 - 31758701
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    ||||||||| |||||||||||||  | ||| ||||||||| | |||||| ||||| |||||||||  | ||||| || |||||||| |||| ||||||||    
T  31758848 aaatgctagaaacacacattttagtatatatttttcaacacattctctttgattgattaaaattcttatgagacccaccaaatttacatgagacccacat 31758749  T
Q  234 gatttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt 281  Q
    ||||||||||  |  ||||||||||||||| || ||| ||| ||||||    
T  31758748 gatttggtggagcttatgtgaattttaaccaatcaaatagaatgtgtt 31758701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 32128709 - 32128774
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||| |||||||||||| |||||||||||||||| |||||| |||||||||||||    
T  32128709 ttgattttatcactgaccttttttcattcccagagccgagcctccaaattcttagggacggccctg 32128774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 86
Target Start/End: Complemental strand, 5128821 - 5128758
Alignment:
Q  23 gattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||| |||||||| |||||||||||||||  ||||||||||||||||||||    
T  5128821 gattttatcactggcctcttttcattcccagagccgagcctctaaattctcagggacggccctg 5128758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 134 - 285
Target Start/End: Complemental strand, 7403244 - 7403101
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    |||| ||||||||||| ||||||||| | ||| ||||||| |||||||| |||||||||||||||||| ||  | ||| ||||||||| ||  |||||||    
T  7403244 aaattctagcaacacatattttaacacacactattcaacacactctctttgattggttaaaattcacatgattcccatgaaatttatacgagtcccacat 7403145  T
Q  234 gatttggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaaa 285  Q
    |||||        |||||||| |||||||| |||||||||||| || |||||    
T  7403144 gattt--------ccatgtgagttttaaccaattaaagagagtatgataaaa 7403101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 2790724 - 2790659
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    |||||||||||||||| || |||||||| ||||||||||||||||||||||| || ||||||||||    
T  2790724 ttgattttatcactggtctcttttcattcccagagccgagcctccgaattcttagagacggccctg 2790659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 17679524 - 17679589
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    |||||||||||||||| || |||||||| ||||| |||||||||||||||||||| ||||||||||    
T  17679524 ttgattttatcactggtctcttttcattcccagaaccgagcctccgaattctcagagacggccctg 17679589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 184 - 281
Target Start/End: Complemental strand, 33414114 - 33414017
Alignment:
Q  184 gattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt 281  Q
    ||||| |||||||||| | | ||| || |||||||||||   |||||| ||||||||||||| ||||||||||||||||| || ||||||||||||||    
T  33414114 gattgattaaaattcatatgggacccaccaaatttatataggacccacgtgatttggtgggatccatgtgaattttaaccaatcaaagagagtgtgtt 33414017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 34768557 - 34768492
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    |||||||||||||| |||| |||||||| ||| ||||||||||||||||||||||||||| |||||    
T  34768557 ttgattttatcactagcctcttttcattcccaaagccgagcctccgaattctcagggacgaccctg 34768492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 38209573 - 38209520
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctca 74  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  38209573 ttgattttatcactggcctcttttcatttccagagccgagcctccaaattctca 38209520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 48209376 - 48209436
Alignment:
Q  26 tttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||| || |||||| | |||||||||||||||||||||||||||||||||||||    
T  48209376 tttatcactggtctcttttcactcccagagccgagcctccgaattctcagggacggccctg 48209436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 281
Target Start/End: Complemental strand, 52375047 - 52374931
Alignment:
Q  165 ttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccg 264  Q
    ||||||| | ||||| || ||||||||||||||||||   ||  ||||||||||||| |  |||||||| |||||||| || ||||||||||||||| |     
T  52375047 ttttcaatacactctttttgattggttaaaattcacatttgatccatcaaatttatacgggacccacataatttggtgagatccatgtgaattttaatct 52374948  T
Q  265 attaaagagagtgtgtt 281  Q
    || ||||||||||||||    
T  52374947 atcaaagagagtgtgtt 52374931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 23508492 - 23508425
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctgat 88  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||||||| ||| |||||| ||||||    
T  23508492 ttgattttatcactggcctcttttcattcccaaagccgagcctccgaattttcatggacggtcctgat 23508425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 134 - 261
Target Start/End: Complemental strand, 32286392 - 32286266
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    ||||||||||||||||| ||| |||| ||| ||||||||| ||||| ||  ||||||||||||||||| |   |  | |||||||||||   | ||||||    
T  32286392 aaatgctagcaacacacgtttcaacatatatttttcaacacactcttttttattggttaaaattcacatggatccaaccaaatttatat-tgatccacat 32286294  T
Q  234 gatttggtgggacccatgtgaattttaa 261  Q
    ||||||||||||| ||||||||||||||    
T  32286293 gatttggtgggactcatgtgaattttaa 32286266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 179 - 281
Target Start/End: Complemental strand, 38036351 - 38036251
Alignment:
Q  179 tcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgt 278  Q
    |||| |||| ||||||||||||| ||||| || |||||||||||| ||||||||| |||||  ||||| |||||||||||||||| || ||||| | |||    
T  38036351 tctttgatttgttaaaattcacatgagacccaacaaatttatatggaacccacataatttg--gggactcatgtgaattttaaccaatcaaagaaaatgt 38036254  T
Q  279 gtt 281  Q
    |||    
T  38036253 gtt 38036251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 1105656 - 1105722
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctga 87  Q
    ||||||||||||||| ||| |||||||| ||||||||||||||| ||||||||| ||||||| ||||    
T  1105656 ttgattttatcactgacctcttttcattcccagagccgagcctctgaattctcaaggacggctctga 1105722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 19498626 - 19498692
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctga 87  Q
    |||||||||||| |||||| |||||||| | ||||||||||||||||||||| || |||||||||||    
T  19498626 ttgattttatcattggcctgttttcattcctagagccgagcctccgaattcttagtgacggccctga 19498692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 21434033 - 21433967
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcaca 201  Q
    |||| |||||||||||||||||||| | ||||||||||| |||||| | ||||||||||||||||||    
T  21434033 aatggtagcaacacacattttaacatacacttttcaacacactctcattgattggttaaaattcaca 21433967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 24969725 - 24969787
Alignment:
Q  25 ttttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctga 87  Q
    |||||||||| |||| |||||||| |||||| |||||||||||||||| ||||||||||||||    
T  24969725 ttttatcactagcctcttttcattcccagagtcgagcctccgaattcttagggacggccctga 24969787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 37777205 - 37777139
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctga 87  Q
    ||||||||||||||| ||| |||||||| ||||||||||||||||||||| | |||||| |||||||    
T  37777205 ttgattttatcactgacctcttttcattcccagagccgagcctccgaatttttagggacagccctga 37777139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 10428181 - 10428116
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||| ||||| ||| |||||||| ||||||||||||||||||||||||  |||||||||||    
T  10428181 ttgattttagcactgacctcttttcattcccagagccgagcctccgaattctcgaggacggccctg 10428116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 16882378 - 16882313
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||| | | |||||||| | ||||||||||||||||||||| |||||||||||||    
T  16882378 ttgattttatcactgacttcttttcattcctagagccgagcctccgaattcttagggacggccctg 16882313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 16922310 - 16922245
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    |||||||||||||||| || |||||||| ||| || ||||||||| ||||||||||||||||||||    
T  16922310 ttgattttatcactggtctcttttcattcccaaagtcgagcctccaaattctcagggacggccctg 16922245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 54083225 - 54083160
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||| ||| ||||||||  |||||||||||||||||||| | |||||||||||||    
T  54083225 ttgattttatcactgacctcttttcattctcagagccgagcctccgaatttttagggacggccctg 54083160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 19382366 - 19382311
Alignment:
Q  226 acccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt 281  Q
    |||||||||||||||||||| ||||||||||||||||| || ||| ||||||||||    
T  19382366 acccacatgatttggtgggatccatgtgaattttaaccaatcaaatagagtgtgtt 19382311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 38352248 - 38352189
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacg 80  Q
    |||||||||||||||  || |||||||| ||||||||||||||||||||||| |||||||    
T  38352248 ttgattttatcactgatctcttttcattcccagagccgagcctccgaattcttagggacg 38352189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 2324745 - 2324803
Alignment:
Q  143 caacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcaca 201  Q
    ||||||||||||||||  | ||||||||| |||||||||| ||||||||||||||||||    
T  2324745 caacacacattttaacgcacacttttcaatatactctctttgattggttaaaattcaca 2324803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 276
Target Start/End: Complemental strand, 2324863 - 2324777
Alignment:
Q  190 ttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagagagt 276  Q
    |||||||| ||| | ||| || ||||||||||||  |||||||||||||||||  || |||||||||||||||| || |||||||||    
T  2324863 ttaaaatttacatgggacccaccaaatttatatgggacccacatgatttggtgaaactcatgtgaattttaaccaatcaaagagagt 2324777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 9578635 - 9578573
Alignment:
Q  26 tttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctgat 88  Q
    ||||||||| |||| |||||| | |||||| |||||||||||||||||| |||||||||||||    
T  9578635 tttatcacttgcctcttttcactcccagagtcgagcctccgaattctcaaggacggccctgat 9578573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 17181275 - 17181325
Alignment:
Q  212 caaatttatatgaaacccacatgatttggtgggacccatgtgaattttaac 262  Q
    ||||||||||||| |||||| ||||||||||||||| ||||||||||||||    
T  17181275 caaatttatatgagacccacgtgatttggtgggacctatgtgaattttaac 17181325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 134 - 305
Target Start/End: Original strand, 41840571 - 41840743
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    ||||| |||||||| ||||||||||| ||| ||||||||| |||||||| ||||| |||||||| ||| | |   || ||||||||||||  |  | | |    
T  41840571 aaatgttagcaacatacattttaacacatatttttcaacacactctctttgattgattaaaatttacatgggttccaccaaatttatatgtca-tcgctt 41840669  T
Q  234 gatttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt--aaaatatgtgttgttatcattcct 305  Q
     |||| |||| || |||||||||||||||| || ||| ||||||||||  | ||||||||||| || |||||||    
T  41840670 aatttagtggaactcatgtgaattttaaccaatcaaatagagtgtgttgaacaatatgtgttgctagcattcct 41840743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 51578114 - 51578037
Alignment:
Q  184 gattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaac 262  Q
    |||||||||||||||||| | ||| || ||||||| ||||| ||| ||| || ||||||||||||||||||||||||||    
T  51578114 gattggttaaaattcacatg-gacccaccaaatttgtatgagaccgacacgaattggtgggacccatgtgaattttaac 51578037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 201
Target Start/End: Original strand, 52374896 - 52374962
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcaca 201  Q
    ||||||| ||||||||||||||||| | ||||||||||| |||||||| ||| | ||||||||||||    
T  52374896 aatgctaacaacacacattttaacacacacttttcaacacactctctttgatagattaaaattcaca 52374962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 40089649 - 40089714
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||| | | |||||||| | ||||||||||||||||||||| ||||||| |||||    
T  40089649 ttgattttatcactgacttcttttcattccaagagccgagcctccgaattcttagggacgaccctg 40089714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 226 - 278
Target Start/End: Complemental strand, 993286 - 993234
Alignment:
Q  226 acccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgt 278  Q
    ||||||||||||||||||||| |||||||||||||||| || |||||| ||||    
T  993286 acccacatgatttggtgggactcatgtgaattttaaccaatcaaagagtgtgt 993234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 285
Target Start/End: Original strand, 25592253 - 25592325
Alignment:
Q  213 aaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaaa 285  Q
    ||||||||||   |||||||||||||||||||||| |  |||||||||||| || ||||||||||| ||||||    
T  25592253 aaatttatataggacccacatgatttggtgggaccaaaatgaattttaaccaatgaaagagagtgtattaaaa 25592325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 201
Target Start/End: Complemental strand, 993358 - 993291
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcaca 201  Q
    ||||||||||||||||||| |||||| | ||||| ||||| |||||||| |||| |||| ||||||||    
T  993358 aaatgctagcaacacacatcttaacacacactttccaacaaactctctttgatttgttagaattcaca 993291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 201
Target Start/End: Original strand, 33413981 - 33414048
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcaca 201  Q
    |||||| | ||| ||||||| ||||| | ||||||||||| |||||||| ||||||||||||||||||    
T  33413981 aaatgccaacaaaacacattgtaacacacacttttcaacacactctctttgattggttaaaattcaca 33414048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 43455514 - 43455463
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattct 72  Q
    ||||||||||||||| ||| |||||||| |||||| ||||||||||||||||    
T  43455514 ttgattttatcactgacctcttttcattcccagagtcgagcctccgaattct 43455463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 285
Target Start/End: Complemental strand, 9024042 - 9023920
Alignment:
Q  163 acttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaac 262  Q
    ||||||||||| | |||||| |||| ||||||||| ||| | ||| ||   ||||||||||  || ||||||||||| |||||| ||||||||||||| |    
T  9024042 acttttcaacacattctctttgatttgttaaaatttacatgggacccactcaatttatatgggactcacatgatttgttgggactcatgtgaattttacc 9023943  T
Q  263 cgattaaagagagtgtgttaaaa 285  Q
    | || ||| |  |||||||||||    
T  9023942 caatcaaaaaacgtgtgttaaaa 9023920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 294
Target Start/End: Complemental strand, 34397553 - 34397400
Alignment:
Q  140 tagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttg 239  Q
    |||||||| ||||||||||| | |||| || ||||| |||||| ||||| | |||||||||| | ||  ||  ||||||||||   |||||||||||||     
T  34397553 tagcaacatacattttaacacacacttctcgacatattctctttgattgat-aaaattcacatgtgatccactaaatttatatatgacccacatgatttt 34397455  T
Q  240 gtgggacccatgtgaattttaaccgattaaagagagtgtgttaaaatatgtgttg 294  Q
    ||  |||||||||||||||||| | || ||| | | | ||||||||| |||||||    
T  34397454 gtacgacccatgtgaattttaatcaatcaaataaaatatgttaaaatgtgtgttg 34397400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 35465230 - 35465284
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcag 75  Q
    ||||||||||||||| ||| |||||||| |||||  |||||||||||||||||||    
T  35465230 ttgattttatcactgacctcttttcattcccagaatcgagcctccgaattctcag 35465284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 37514785 - 37514848
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| |||||||| || |  | |||||||| ||||||||||||||||||||    
T  37514785 ttgattttatcactggcctcttttcattccccg--ctgagcctccaaattctcagggacggccctg 37514848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 87
Target Start/End: Original strand, 980359 - 980396
Alignment:
Q  50 ccagagccgagcctccgaattctcagggacggccctga 87  Q
    |||||||||||||||||||||||||||||||| |||||    
T  980359 ccagagccgagcctccgaattctcagggacggtcctga 980396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 10979027 - 10979092
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||  ||| |||||||| |||||||  | ||||||||||||||| ||||||||||    
T  10979027 ttgattttatcactaacctcttttcattcccagagctaaacctccgaattctcagagacggccctg 10979092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 292
Target Start/End: Complemental strand, 21433933 - 21433876
Alignment:
Q  235 atttggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaaatatgtgt 292  Q
    |||||||||| | |||||||||||||||| || |||||||||||||| ||| ||||||    
T  21433933 atttggtgggtctcatgtgaattttaaccaatcaaagagagtgtgttgaaaaatgtgt 21433876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 231
Target Start/End: Original strand, 28987249 - 28987346
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccac 231  Q
    |||||||| | ||||| ||||||||| ||| ||||||||||||| | || |||| ||| ||||||||| || ||||  |||||||||||  |||||||    
T  28987249 aaatgctatcgacacatattttaacatatatttttcaacatactttttttgatttgttgaaattcacatgaaactcgccaaatttatattcaacccac 28987346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 13460305 - 13460361
Alignment:
Q  31 cactggccttttttcatttccagagccgagcctccgaattctcagggacggccctga 87  Q
    ||||| ||| |||| ||| |||||| |||||||||||||||||| ||||||||||||    
T  13460305 cactgacctctttttattcccagagtcgagcctccgaattctcaaggacggccctga 13460361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 35779310 - 35779242
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctgatg 89  Q
    |||||||||||||| |||| |||||||| |  ||| ||| |||||||||||||| |||||||| |||||    
T  35779310 ttgattttatcactagcctcttttcattcctcgagtcgaacctccgaattctcaaggacggccttgatg 35779242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 281
Target Start/End: Complemental strand, 48791314 - 48791246
Alignment:
Q  213 aaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt 281  Q
    |||||||||||  ||| ||||  |||||||||  |||| ||||||| ||||||||||||||||||||||    
T  48791314 aaatttatatgggaccgacatagtttggtgggttccatatgaatttcaaccgattaaagagagtgtgtt 48791246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 278
Target Start/End: Complemental strand, 1338551 - 1338448
Alignment:
Q  175 actctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagaga 274  Q
    |||||||| |||||||||| |||||||   |   |||||||||||||||   |||| |  ||||||||||| |||||||| |||||||| || |||||||    
T  1338551 actctctttgattggttaagattcacataggttccatcaaatttatatgggtcccatacaatttggtgggatccatgtgatttttaaccaatcaaagaga 1338452  T
Q  275 gtgt 278  Q
    ||||    
T  1338451 gtgt 1338448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 134 - 201
Target Start/End: Original strand, 15134545 - 15134612
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcaca 201  Q
    ||||||||| |||||| ||||||||| | | ||||||||| | ||||||  |||||||||||||||||    
T  15134545 aaatgctagtaacacaaattttaacacacatttttcaacacattctcttttattggttaaaattcaca 15134612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 51964835 - 51964897
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggcc 83  Q
    ||||||||||||  ||||| |||||||| ||||||||||| ||||||||| ||| ||| ||||    
T  51964835 ttgattttatcatcggcctcttttcattcccagagccgagtctccgaattttcaaggatggcc 51964897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 286
Target Start/End: Complemental strand, 53128045 - 53127971
Alignment:
Q  212 caaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaaat 286  Q
    |||||||||||   |||||| |||| ||||||||||||||||| |||||||| || ||| || | ||||||||||    
T  53128045 caaatttatataggacccacttgatatggtgggacccatgtgagttttaaccaatcaaatagtgcgtgttaaaat 53127971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 293
Target Start/End: Complemental strand, 41840653 - 41840593
Alignment:
Q  235 atttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt--aaaatatgtgtt 293  Q
    ||||||||| |||||||| |||||||| | || ||||||||||||||  ||||||||||||    
T  41840653 atttggtggaacccatgtaaattttaatcaatcaaagagagtgtgttgaaaaatatgtgtt 41840593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 5e-38; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 134 - 281
Target Start/End: Original strand, 3907634 - 3907779
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    |||||||||||||||||||| ||||||| ||||||||||| ||||| |  |||||||||||||||||| | ||| || ||||||||||||  ||||||||    
T  3907634 aaatgctagcaacacacattctaacaaacacttttcaacacactcttt--gattggttaaaattcacatgggacccaccaaatttatatgggacccacat 3907731  T
Q  234 gatttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt 281  Q
    |||||||||||||||||||||||||||||| || ||| ||| ||||||    
T  3907732 gatttggtgggacccatgtgaattttaaccaatcaaaaagaatgtgtt 3907779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 135 - 305
Target Start/End: Original strand, 25545199 - 25545367
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatg 234  Q
    ||||||||||| ||||||||||||| | | ||||||||| ||||| |  |||||||||||||||||| ||||| ||  |||||||||||  ||| |||||    
T  25545199 aatgctagcaatacacattttaacacacatttttcaacacactcttt--gattggttaaaattcacatgagacccactaaatttatatgggaccgacatg 25545296  T
Q  235 atttggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaaatatgtgttgttatcattcct 305  Q
    |||||||||||| || ||||||||||||| || ||||||||||||||||||| ||||||| || |||||||    
T  25545297 atttggtgggactcacgtgaattttaaccaatcaaagagagtgtgttaaaatgtgtgttgatagcattcct 25545367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 134 - 281
Target Start/End: Original strand, 36059187 - 36059332
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    |||||||||||||||| |||||||||  || |||| |||| | |||||| ||||| |||| ||||||| ||||| |||||||||||||||| ||||||||    
T  36059187 aaatgctagcaacacatattttaaca--taatttttaacagaatctctttgattgattaagattcacatgagacccatcaaatttatatgagacccacat 36059284  T
Q  234 gatttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt 281  Q
    |||||| ||||| |||||| |||||||||| || ||| | ||||||||    
T  36059285 gatttgatgggatccatgtaaattttaaccaatcaaataaagtgtgtt 36059332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 135 - 278
Target Start/End: Original strand, 22399749 - 22399892
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatg 234  Q
    ||||||||||||||||||| ||| |   ||||||||||| ||||| || |||||| ||||||||||| ||||| || |||||| |||||| ||||| |||    
T  22399749 aatgctagcaacacacattctaatactcacttttcaacacactctttttgattggataaaattcacatgagacccaccaaattcatatgagacccagatg 22399848  T
Q  235 atttggtgggacccatgtgaattttaaccgattaaagagagtgt 278  Q
    |||| || |||| |||||||||||||||| || |||||||||||    
T  22399849 atttagtaggactcatgtgaattttaaccaatcaaagagagtgt 22399892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 134 - 292
Target Start/End: Complemental strand, 42420178 - 42420020
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    ||||| |||||||||||||| ||| | |  |||||||||| ||||| || |||||||||||| ||||| ||||  |||||||||||||||  | ||||||    
T  42420178 aaatgttagcaacacacattctaaaacacgcttttcaacacactctatttgattggttaaaactcacatgagatccatcaaatttatatgggatccacat 42420079  T
Q  234 gatttggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaaatatgtgt 292  Q
    |||||||||||||||| ||   |||||||| |||||||||| |||||| ||| ||||||    
T  42420078 gatttggtgggacccacgtatgttttaaccaattaaagagaatgtgttgaaaaatgtgt 42420020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 134 - 305
Target Start/End: Original strand, 33029472 - 33029646
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    |||||||||||||||| ||||||||| ||||||||||||| | ||||||  ||| ||||||||||| |  || | || |||||||||||||  | ||  |    
T  33029472 aaatgctagcaacacatattttaacatatacttttcaacacattctctttaattagttaaaattcatataagtcccaccaaatttatatgagtcacatct 33029571  T
Q  234 gatttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt---aaaatatgtgttgttatcattcct 305  Q
     |||||||||||| ||||||| ||||||||||| ||||||||||||||   ||||| | ||||| ||||||||||    
T  33029572 aatttggtgggactcatgtgagttttaaccgatcaaagagagtgtgttgaaaaaatgtatgttgctatcattcct 33029646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 15480071 - 15480006
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  15480071 ttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggccctg 15480006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 27079132 - 27079200
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctgatg 89  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||    
T  27079132 ttgattttatcactggcctcttttcattctcagagccgagcctccgaattctcagggacggccctgatg 27079200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 34756346 - 34756289
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcaggga 78  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34756346 ttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcaggga 34756289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 36187860 - 36187795
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  36187860 ttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccctg 36187795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 134 - 281
Target Start/End: Complemental strand, 4190222 - 4190073
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatac--tctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccac 231  Q
    |||||||||||||| ||||| ||||| | ||||||||||| ||  |||||| ||| |||||||||||||| | ||| || |||||| | ||   ||||||    
T  4190222 aaatgctagcaacatacattctaacacacacttttcaacacacggtctctttgataggttaaaattcacatgggacccaccaaattcacataggacccac 4190123  T
Q  232 atgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt 281  Q
     | ||||| ||||| ||||||||||||||||| || ||||||||||||||    
T  4190122 gtaatttgttgggatccatgtgaattttaaccaatcaaagagagtgtgtt 4190073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 134 - 280
Target Start/End: Complemental strand, 41169551 - 41169405
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    ||||||||| |||||| ||||||||| | | ||||||||| |||||||| |||  ||||||||||||| | ||  || ||||||||||||  || | |||    
T  41169551 aaatgctagtaacacatattttaacacacatttttcaacacactctctttgatccgttaaaattcacatgtgatccaccaaatttatatgggactcgcat 41169452  T
Q  234 gatttggtgggacccatgtgaattttaaccgattaaagagagtgtgt 280  Q
    |||||||||| | |||||||||||| |||| || ||| |||||||||    
T  41169451 gatttggtggaatccatgtgaatttcaaccaatcaaatagagtgtgt 41169405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 7671053 - 7671118
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||| | |||||||||||    
T  7671053 ttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttaaggacggccctg 7671118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 16198774 - 16198709
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||||||    
T  16198774 ttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagggaaggccctg 16198709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 19523319 - 19523380
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggc 82  Q
    |||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||    
T  19523319 ttgattttatcactggtctcttttcattcccagagccgagcctccgaattctcagggacggc 19523380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 31194593 - 31194528
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    |||||||||||||||| || |||||||| ||||||||||||||||||||| |||||||||||||||    
T  31194593 ttgattttatcactggtctcttttcattcccagagccgagcctccgaattttcagggacggccctg 31194528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 2275010 - 2275070
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacgg 81  Q
    ||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||    
T  2275010 ttgattttatcactggcctcttttcattcccagaaccgagcctccgaattctcagggacgg 2275070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 38869344 - 38869276
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctgatg 89  Q
    |||||||||| |||| ||| |||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  38869344 ttgattttataactgacctcttttcattcccagagccgagcctccgaattcttagggacggccctgatg 38869276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 22986538 - 22986471
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctgat 88  Q
    ||||||||||||||||||| ||||||||  |||||| ||||||||||||||||| |||||||||||||    
T  22986538 ttgattttatcactggcctcttttcattctcagagctgagcctccgaattctcacggacggccctgat 22986471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 134 - 244
Target Start/End: Complemental strand, 40927767 - 40927657
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    |||||||||||||||||||| ||||| | | ||||||||| ||| |||| ||||||| |||||||||| | ||| || ||| |||| ||| |||||||||    
T  40927767 aaatgctagcaacacacattataacacaaatttttcaacaaactatctttgattggtcaaaattcacatgggacccaccaattttacatggaacccacat 40927668  T
Q  234 gatttggtggg 244  Q
    |||||| ||||    
T  40927667 gatttgatggg 40927657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 16592055 - 16591986
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctgatgc 90  Q
    |||||||||||| |||||| ||||||||  ||||||||||||||| |||||||| |||||||||||||||    
T  16592055 ttgattttatcattggcctcttttcattctcagagccgagcctccaaattctcaaggacggccctgatgc 16591986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 16799305 - 16799240
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||| | | |||||||| ||||||||||||||||||||||| |||||||||||||    
T  16799305 ttgattttatcactgacatcttttcattcccagagccgagcctccgaattcttagggacggccctg 16799240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 216 - 292
Target Start/End: Complemental strand, 43462040 - 43461964
Alignment:
Q  216 tttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaaatatgtgt 292  Q
    ||||||||| |||||| ||||||||||| || | ||||||||||||||||||||| ||||||||||| || ||||||    
T  43462040 tttatatgagacccacgtgatttggtggaactcgtgtgaattttaaccgattaaaaagagtgtgttagaaaatgtgt 43461964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 9364411 - 9364476
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| |||||||| ||||||| ||||||||||||||| ||||  |||||||    
T  9364411 ttgattttatcactggcctcttttcattcccagagctgagcctccgaattcttaggggtggccctg 9364476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 30854452 - 30854511
Alignment:
Q  24 attttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggcc 83  Q
    |||||||| ||| |||||||||||| |||||||||||||||| |||| ||||||||||||    
T  30854452 attttatcgctgaccttttttcattcccagagccgagcctccaaattatcagggacggcc 30854511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 292
Target Start/End: Original strand, 4158058 - 4158215
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatg 234  Q
    |||||||  |||||||||||||||| | | ||||||| ||| | |||| ||| |||| ||||||||| |   |  | |||||||||||||  |||||||     
T  4158058 aatgctaagaacacacattttaacacacaattttcaatatattttctttgatcggttgaaattcacatggatcataccaaatttatatgagtcccacata 4158157  T
Q  235 atttggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaaatatgtgt 292  Q
    ||||| |||||  | |||||||||||||| || ||||||||| | |||||| ||||||    
T  4158158 atttgatgggattcgtgtgaattttaaccaatcaaagagagtatattaaaaaatgtgt 4158215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 280
Target Start/End: Complemental strand, 7721459 - 7721338
Alignment:
Q  159 aaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattt 258  Q
    ||||| |||| |||| ||||||||  |||||||| ||||||||   ||| || ||||||||||  | |||||||| |||| || ||||||||||||| ||    
T  7721459 aaataatttttaacacactctctttaattggttataattcacataggacccaccaaatttatacaagacccacataatttagtaggacccatgtgaactt 7721360  T
Q  259 taaccgattaaagagagtgtgt 280  Q
    ||||| || ||| |||||||||    
T  7721359 taacccatcaaaaagagtgtgt 7721338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 23284008 - 23283943
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| |||||||| | | | | ||||||| |||||||||||||||||||||    
T  23284008 ttgattttatcactggcctcttttcattcctaaaactgagcctctgaattctcagggacggccctg 23283943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 35244981 - 35244916
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattca 199  Q
    |||||||||||||||||||||||||| | |||| |||||| ||| |||| |||||||| |||||||    
T  35244981 aaatgctagcaacacacattttaacatacacttgtcaacacactttctttgattggttgaaattca 35244916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 263
Target Start/End: Complemental strand, 38029621 - 38029572
Alignment:
Q  214 aatttatatgaaacccacatgatttggtgggacccatgtgaattttaacc 263  Q
    ||||||||||| | ||||||||||||||| ||||||||||||||||||||    
T  38029621 aatttatatgagatccacatgatttggtgagacccatgtgaattttaacc 38029572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 40389518 - 40389461
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcaggga 78  Q
    ||||||||||||||| | | |||||||| ||||||||||||||||||||||| |||||    
T  40389518 ttgattttatcactgacatcttttcattcccagagccgagcctccgaattcttaggga 40389461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 28822317 - 28822253
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccct 85  Q
    ||||||||||||||  ||| |||||||| ||| |||||| |||||||||||| ||||||||||||    
T  28822317 ttgattttatcactaacctcttttcattcccaaagccgaacctccgaattcttagggacggccct 28822253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 31881413 - 31881345
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctgatg 89  Q
    |||||||||| |||| ||  |||||||| |||||||||||||||  |||| ||||||||||||||||||    
T  31881413 ttgattttattactgaccacttttcattcccagagccgagcctctaaattttcagggacggccctgatg 31881345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 27924202 - 27924269
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctgat 88  Q
    ||||||||||||||||||| ||||||||  ||||| |||||| ||||||||| ||  |||||||||||    
T  27924202 ttgattttatcactggcctcttttcattctcagagtcgagcccccgaattcttagaaacggccctgat 27924269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 307
Target Start/End: Complemental strand, 3416345 - 3416251
Alignment:
Q  213 aaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaaatatgtgttgttatcattcctat 307  Q
    ||||||||||   ||||||||||||  ||||||| ||||| |||||||| | || ||||| |||||||| |||| ||||||||||  ||||||||    
T  3416345 aaatttatatatgacccacatgattctgtgggacacatgtaaattttaatcaatcaaagaaagtgtgttgaaatgtgtgttgttaaaattcctat 3416251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 285
Target Start/End: Original strand, 7721402 - 7721452
Alignment:
Q  235 atttggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaaa 285  Q
    |||||||||| || ||||||||| ||||| |||||||||||||||||||||    
T  7721402 atttggtgggtcctatgtgaattataaccaattaaagagagtgtgttaaaa 7721452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 17474933 - 17474867
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcaca 201  Q
    ||||||| ||||| ||||||||||| | ||||||||||| || ||||| ||||| ||||||||||||    
T  17474933 aatgctaacaacatacattttaacacacacttttcaacacacactctttgattgattaaaattcaca 17474867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 281
Target Start/End: Original strand, 31273069 - 31273162
Alignment:
Q  188 ggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt 281  Q
    |||||||||||||| ||||  || |||||||||||  || ||||||||||||||  || |||||| |||||||||  || ||| ||||||||||    
T  31273069 ggttaaaattcacatgagatccaccaaatttatatagaatccacatgatttggtaagatccatgtaaattttaacaaatcaaaaagagtgtgtt 31273162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 282
Target Start/End: Original strand, 3771222 - 3771292
Alignment:
Q  212 caaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgtta 282  Q
    ||||||||||||   ||| ||||||||||||| ||| ||||||||||||||| || ||||||  |||||||    
T  3771222 caaatttatatgggtcccgcatgatttggtggaaccaatgtgaattttaaccaatcaaagagtatgtgtta 3771292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 201
Target Start/End: Original strand, 13122046 - 13122084
Alignment:
Q  163 acttttcaacatactctcttcgattggttaaaattcaca 201  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  13122046 acttttcaacatactctctttgattgggtaaaattcaca 13122084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 281
Target Start/End: Complemental strand, 36945721 - 36945619
Alignment:
Q  179 tcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgt 278  Q
    |||| |||||||||| ||||||| || |  || ||||||||||||| ||| | ||||||||||| |||   |||||| || ||||||| ||| |||||||    
T  36945721 tctttgattggttaatattcacatgaaatccaccaaatttatatgagacctatatgatttggtgtgacttgtgtgaaattcaaccgatcaaaaagagtgt 36945622  T
Q  279 gtt 281  Q
    |||    
T  36945621 gtt 36945619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 277
Target Start/End: Original strand, 27195308 - 27195373
Alignment:
Q  212 caaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtg 277  Q
    ||||||||||||   || ||||||||| ||||||| |||||||||||||| | || ||||||||||    
T  27195308 caaatttatatgggtccgacatgattttgtgggactcatgtgaattttaatcaatcaaagagagtg 27195373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 274
Target Start/End: Complemental strand, 35244906 - 35244861
Alignment:
Q  229 cacatgatttggtgggacccatgtgaattttaaccgattaaagaga 274  Q
    |||||||| |||||||| ||||||||||||||||| || |||||||    
T  35244906 cacatgatatggtgggatccatgtgaattttaaccaatcaaagaga 35244861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 258
Target Start/End: Complemental strand, 40530079 - 40530010
Alignment:
Q  189 gttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattt 258  Q
    ||||||||||||| ||||  ||  |||||||||| | ||||||||||||||||| ||| ||||| |||||    
T  40530079 gttaaaattcacaggagatccactaaatttatattagacccacatgatttggtgtgactcatgtaaattt 40530010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 41106466 - 41106523
Alignment:
Q  216 tttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagag 273  Q
    ||||||||  |||||||| |||||||| |||| ||||||||||||||| || ||||||    
T  41106466 tttatatgggacccacataatttggtgcgaccgatgtgaattttaaccaataaaagag 41106523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 292
Target Start/End: Original strand, 41169469 - 41169526
Alignment:
Q  235 atttggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaaatatgtgt 292  Q
    |||||||||  | ||||||||||||||| ||| |||||||||||||| ||| ||||||    
T  41169469 atttggtggatcacatgtgaattttaacggatcaaagagagtgtgttgaaaaatgtgt 41169526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 4158201 - 4158157
Alignment:
Q  173 atactctcttcgattggttaaaattcacacgagactcatcaaatt 217  Q
    |||||||||| |||||||||||||||||||||  | |||||||||    
T  4158201 atactctctttgattggttaaaattcacacgaatcccatcaaatt 4158157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 292
Target Start/End: Complemental strand, 28907415 - 28907371
Alignment:
Q  248 catgtgaattttaaccgattaaagagagtgtgttaaaatatgtgt 292  Q
    ||||||||||||||||||| ||||||| |||||| ||| ||||||    
T  28907415 catgtgaattttaaccgatcaaagagaatgtgttgaaaaatgtgt 28907371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 292
Target Start/End: Complemental strand, 28943810 - 28943766
Alignment:
Q  248 catgtgaattttaaccgattaaagagagtgtgttaaaatatgtgt 292  Q
    ||||||||||||||||||| ||||||| |||||| ||| ||||||    
T  28943810 catgtgaattttaaccgatcaaagagaatgtgttgaaaaatgtgt 28943766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 72
Target Start/End: Complemental strand, 29143462 - 29143434
Alignment:
Q  44 tcatttccagagccgagcctccgaattct 72  Q
    |||||||||||||||||||||||||||||    
T  29143462 tcatttccagagccgagcctccgaattct 29143434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 5e-38; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 134 - 305
Target Start/End: Complemental strand, 40669088 - 40668919
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    |||||||||||||||||||||||||| |  |||||||||| |||||||| |||||||||||||||||||| |   || ||||||||||||   |||||||    
T  40669088 aaatgctagcaacacacattttaacaca--cttttcaacacactctctttgattggttaaaattcacacgggttccaccaaatttatatgggtcccacat 40668991  T
Q  234 gatttggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaaatatgtgttgttatcattcct 305  Q
     |||| ||| ||||||||||| |||||||| || ||||||||||||||||||| ||||||| || |||||||    
T  40668990 aattttgtgagacccatgtgagttttaaccaatcaaagagagtgtgttaaaatgtgtgttgctagcattcct 40668919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 138 - 292
Target Start/End: Complemental strand, 34437754 - 34437601
Alignment:
Q  138 gctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatt 237  Q
    ||||||||||||||||||||||   ||||||||||| |||||||| |||||||||||||||||| | | | |  |||||| |||||   |||||||||||    
T  34437754 gctagcaacacacattttaacacgcacttttcaacacactctctttgattggttaaaattcacatgggtccccccaaatt-atatgggtcccacatgatt 34437656  T
Q  238 tggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaaatatgtgt 292  Q
    |||||||||||||||||||||||||| || ||||||||| |||| ||| ||||||    
T  34437655 tggtgggacccatgtgaattttaaccaatcaaagagagtttgttgaaaaatgtgt 34437601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 151 - 281
Target Start/End: Original strand, 2542697 - 2542827
Alignment:
Q  151 attttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccat 250  Q
    ||||||||| | | ||||||||| |||||||| |||||||||||||| ||| ||| | || |||||||||||| ||||||||||||||||||| | ||||    
T  2542697 attttaacacacatttttcaacacactctctttgattggttaaaatttacatgaggcccaccaaatttatatggaacccacatgatttggtggaagccat 2542796  T
Q  251 gtgaattttaaccgattaaagagagtgtgtt 281  Q
    ||||||||||||| || ||||||| ||||||    
T  2542797 gtgaattttaaccaatcaaagagaatgtgtt 2542827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 134 - 292
Target Start/End: Complemental strand, 7444442 - 7444284
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    ||||| |||||||||||||| ||||||| ||||||||||| | |||||| |||  ||||||||||||| | |||  | ||||||||||||  ||||||||    
T  7444442 aaatgttagcaacacacattctaacaaacacttttcaacacattctctttgatgagttaaaattcacatgggacctaccaaatttatatgggacccacat 7444343  T
Q  234 gatttggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaaatatgtgt 292  Q
    |||||||||||| |  | ||||||||||||||||||||| | |||||| ||| ||||||    
T  7444342 gatttggtgggaactctttgaattttaaccgattaaagaaaatgtgttgaaaaatgtgt 7444284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 165 - 293
Target Start/End: Complemental strand, 38663781 - 38663651
Alignment:
Q  165 ttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccg 264  Q
    ||||||||||||||| ||  ||||||||||||||||| | ||| || |||||||||||   ||||| |||||||||||||||| ||||||||| |||||     
T  38663781 ttttcaacatactctttttaattggttaaaattcacatgggacccaccaaatttatataggacccatatgatttggtgggacctatgtgaattgtaacca 38663682  T
Q  265 attaaagagagtgtgtt--aaaatatgtgtt 293  Q
    || ||||||||||||||  ||||||||||||    
T  38663681 atcaaagagagtgtgttgaaaaatatgtgtt 38663651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 44655871 - 44655937
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctga 87  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  44655871 ttgattttatcactggtctcttttcatttccagagccgagcctccgaattctcagggacggccctga 44655937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 6771924 - 6771989
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  6771924 ttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggccctg 6771989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 185 - 294
Target Start/End: Complemental strand, 23318019 - 23317910
Alignment:
Q  185 attggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaa 284  Q
    ||||||||||||||||| ||||  ||  |||||||||||  |||||||||||||||||||||| ||||||||||||||  ||||||| |||||||||| |    
T  23318019 attggttaaaattcacatgagatccactaaatttatatgggacccacatgatttggtgggacctatgtgaattttaacaaattaaagggagtgtgttaga 23317920  T
Q  285 atatgtgttg 294  Q
    || |||||||    
T  23317919 atgtgtgttg 23317910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 27906711 - 27906646
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  27906711 ttgattttatcactggcctcttttcattttcagagccgagcctccgaattctcagggacggccctg 27906646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 50881562 - 50881621
Alignment:
Q  24 attttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggcc 83  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  50881562 attttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggcc 50881621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 134 - 303
Target Start/End: Original strand, 731308 - 731478
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    |||||||||||| | ||||| ||||| ||| ||||||||| | |   || ||||| |||||||||||| |||| ||| ||||||||||||  ||||||||    
T  731308 aaatgctagcaatatacattctaacacatatttttcaacacatttattttgattgattaaaattcacatgagattcaccaaatttatatgggacccacat 731407  T
Q  234 gatttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt-aaaatatgtgttgttatcattc 303  Q
    ||||||||| ||| ||||| |||||||||| || ||| ||| | |||| ||||| |||||||||| |||||    
T  731408 gatttggtgcgactcatgtaaattttaaccaataaaaaagactttgttgaaaatgtgtgttgttagcattc 731478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 17169086 - 17169152
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctga 87  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  17169086 ttgattttatcactgacctcttttcatttccagagccgagcctccgaattcttagggacggccctga 17169152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 14146430 - 14146495
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||    
T  14146430 ttgattttatcactggcctcttttcattccaagagccgagcctccgaattctcagggacggccctg 14146495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 134 - 263
Target Start/End: Complemental strand, 49403633 - 49403504
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    ||||| |||||||||| ||||||||  ||| ||||||||| ||| | ||  ||| ||||||||||||| ||||| || |||||||||||| |||||||||    
T  49403633 aaatgttagcaacacatattttaacctatatttttcaacacacttttttttatttgttaaaattcacatgagacccaccaaatttatatggaacccacat 49403534  T
Q  234 gatttggtgggacccatgtgaattttaacc 263  Q
     ||||| ||||||  |||||||||||||||    
T  49403533 aatttgatgggacttatgtgaattttaacc 49403504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 165 - 281
Target Start/End: Original strand, 31970129 - 31970245
Alignment:
Q  165 ttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccg 264  Q
    ||||||||| ||||| || ||||||||||||||||||    || || ||||||||||||  ||||||||||||||||||||||||| |||| ||||| |     
T  31970129 ttttcaacacactctttttgattggttaaaattcacattgaacccaccaaatttatatgggacccacatgatttggtgggacccatatgaaatttaatca 31970228  T
Q  265 attaaagagagtgtgtt 281  Q
    |||||| ||||||||||    
T  31970229 attaaaaagagtgtgtt 31970245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 34247157 - 34247216
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacg 80  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  34247157 ttgattttatcactgaccttttttcatttccagagccgagcctccgaattctcaaggacg 34247216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 45563198 - 45563079
Alignment:
Q  163 acttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaac 262  Q
    ||||||||||| ||| |||| ||| |||||||||| ||| ||||  || ||||||||||||| | | |||||||||||||||| ||||||| ||||||||    
T  45563198 acttttcaacacactttctttgatcggttaaaatttacatgagatccaccaaatttatatgagatcaacatgatttggtgggagccatgtgcattttaac 45563099  T
Q  263 cgattaaagagagtgtgtta 282  Q
    | || ||||| |||||||||    
T  45563098 caatcaaagatagtgtgtta 45563079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 175 - 293
Target Start/End: Original strand, 40374056 - 40374173
Alignment:
Q  175 actctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagaga 274  Q
    |||||||| ||| ||||||||||||||   |||||||||||||||||||  |||||||||||||||||||  ||||||||||||||||| || ||| |||    
T  40374056 actctctttgatcggttaaaattcacataggactcatcaaatttatatgggacccacatgatttggtggg-gccatgtgaattttaaccaatcaaataga 40374154  T
Q  275 gtgtgttaaaatatgtgtt 293  Q
    | || || ||| |||||||    
T  40374155 gcgtattgaaaaatgtgtt 40374173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 5027681 - 5027746
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| |||||||| || ||| ||||||||||||||||||||||||||||||    
T  5027681 ttgattttatcactggcctcttttcattccccgagtcgagcctccgaattctcagggacggccctg 5027746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 21740917 - 21740852
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||||||| |||||||||||    
T  21740917 ttgattttatcactggcctcttttcattctcagagccgagcctccgaattctcaaggacggccctg 21740852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 16140185 - 16140244
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacg 80  Q
    ||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||    
T  16140185 ttgattttatcaccggcctcttttcattcccagagccgagcctccgaattctcagggacg 16140244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 135 - 256
Target Start/End: Complemental strand, 49822688 - 49822566
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatg 234  Q
    ||||||||||||||| ||| ||||| | | ||||||||| |||||||| |||||||||||||||||| |   | ||||||||||||| |  ||||| ||     
T  49822688 aatgctagcaacacatattataacacacatttttcaacacactctctttgattggttaaaattcacatggatcccatcaaatttatacgggacccatata 49822589  T
Q  235 atttggt-gggacccatgtgaat 256  Q
    ||||||| |||||||||||||||    
T  49822588 atttggtggggacccatgtgaat 49822566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 19955847 - 19955912
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||||| |||||| ||||||    
T  19955847 ttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttagggacagccctg 19955912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 22865443 - 22865378
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    |||||||||||| || ||| |||||||| ||||||||| |||||||||||||||||||||||||||    
T  22865443 ttgattttatcattgacctcttttcattcccagagccgtgcctccgaattctcagggacggccctg 22865378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 9173000 - 9172940
Alignment:
Q  26 tttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    |||||||| ||||| |||||||| ||||||||||||||||||||||| |||||||||||||    
T  9173000 tttatcaccggcctcttttcattcccagagccgagcctccgaattcttagggacggccctg 9172940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 9180982 - 9180922
Alignment:
Q  26 tttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    |||||||| ||||| |||||||| ||||||||||||||||||||||| |||||||||||||    
T  9180982 tttatcaccggcctcttttcattcccagagccgagcctccgaattcttagggacggccctg 9180922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 281
Target Start/End: Original strand, 34437607 - 34437722
Alignment:
Q  165 ttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccg 264  Q
    ||||||||| |||||||| |||||||||||||||||| | | | || |||||  || ||  ||||| || |||||| ||||||||||||||||||||||     
T  34437607 ttttcaacaaactctctttgattggttaaaattcacatgggtcccaccaaatc-atgtgggacccatataatttggggggacccatgtgaattttaacca 34437705  T
Q  265 attaaagagagtgtgtt 281  Q
    || ||||||||||||||    
T  34437706 atcaaagagagtgtgtt 34437722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 40501772 - 40501705
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctgat 88  Q
    ||||||||||||||| ||| ||||||||  ||||| |||||||||||||||| |||||||||||||||    
T  40501772 ttgattttatcactgacctcttttcattctcagagtcgagcctccgaattcttagggacggccctgat 40501705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 23185557 - 23185623
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctga 87  Q
    ||||||||||||||||||| |||||| | |  |||||||||||||||||||||||| ||||||||||    
T  23185557 ttgattttatcactggcctcttttcaatcctcgagccgagcctccgaattctcaggaacggccctga 23185623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 51607423 - 51607358
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||| ||| |||||||| ||||||||||||||||||||| | |||||||| ||||    
T  51607423 ttgattttatcactgacctcttttcattcccagagccgagcctccgaatttttagggacggtcctg 51607358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 4971601 - 4971534
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctgat 88  Q
    |||||||||||||||| || |||||||| || || ||||||||| |||||||||||||| ||||||||    
T  4971601 ttgattttatcactggtctcttttcattccccgaaccgagcctcagaattctcagggacagccctgat 4971534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 13913463 - 13913396
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctgat 88  Q
    ||||||||||||||||| | ||||||||  ||||||| |||||||||||||| |||||||||| ||||    
T  13913463 ttgattttatcactggcatcttttcattctcagagccaagcctccgaattcttagggacggccttgat 13913396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 201
Target Start/End: Original strand, 38663630 - 38663696
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcaca 201  Q
    |||| ||| |||||||||||||||| ||| ||||||||| |||||||| ||||||||| ||||||||    
T  38663630 aatgttagtaacacacattttaacacatatttttcaacacactctctttgattggttacaattcaca 38663696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 292
Target Start/End: Complemental strand, 939495 - 939335
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    |||||||||||| ||||||||||||| |    |||||||| | | |||| |||||||||||||| ||| | ||| || ||||||||||||  | ||||||    
T  939495 aaatgctagcaagacacattttaacatacgtatttcaacacattatctttgattggttaaaatttacatgggacacaccaaatttatatgggatccacat 939396  T
Q  234 gatttggtgggacccatgtgaattttaaccgattaaagaga--gtgtgttaaaatatgtgt 292  Q
     ||||| || ||   ||||||||||||||| || |||||||   |||||| ||||||||||    
T  939395 aatttgatgagatttatgtgaattttaaccaatcaaagagaatatgtgttgaaatatgtgt 939335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 6889740 - 6889805
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||| ||| ||||||||  |||| ||||||||||||||| ||| |||||||||||    
T  6889740 ttgattttatcactgacctcttttcattctcagaaccgagcctccgaattttcaaggacggccctg 6889805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 6891586 - 6891651
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||| ||| ||||||||  |||| ||||||||||||||| ||| |||||||||||    
T  6891586 ttgattttatcactgacctcttttcattctcagaaccgagcctccgaattttcaaggacggccctg 6891651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 261
Target Start/End: Original strand, 11120317 - 11120368
Alignment:
Q  210 atcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaa 261  Q
    |||||||| |||||||||| |||||||||||||||| || ||||||||||||    
T  11120317 atcaaattaatatgaaaccaacatgatttggtgggatccgtgtgaattttaa 11120368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 3406552 - 3406614
Alignment:
Q  24 attttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    |||||||||||| ||| |||||||| || |||| |||||||| ||||||||||||| ||||||    
T  3406552 attttatcactgacctcttttcattccccgagctgagcctccaaattctcagggacagccctg 3406614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 3440268 - 3440206
Alignment:
Q  24 attttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    |||||||||||| ||| |||||||| || |||| |||||||| ||||||||||||| ||||||    
T  3440268 attttatcactgacctcttttcattccccgagctgagcctccaaattctcagggacagccctg 3440206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 280
Target Start/End: Original strand, 39131544 - 39131687
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatg 234  Q
    |||||||||||||| |  ||||||| | ||||| ||||   ||||||| |||||||||||||||||| | | | | ||||||||||| |  |||||| ||    
T  39131544 aatgctagcaacacgctctttaacacacactttccaact--ctctctttgattggttaaaattcacatgggtcccctcaaatttatacgggacccacttg 39131641  T
Q  235 atttggtgggacccatgtgaattttaaccgattaaagagagtgtgt 280  Q
    ||||||||| | | |||||||||| |||| || ||| ||| |||||    
T  39131642 atttggtggcaactatgtgaatttcaaccaatcaaaaagactgtgt 39131687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 5316810 - 5316875
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||| ||| |||||||| | |  | ||||||||| ||||||||||||||||||||    
T  5316810 ttgattttatcactgacctcttttcattcctaaggtcgagcctccaaattctcagggacggccctg 5316875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 292
Target Start/End: Original strand, 49822607 - 49822664
Alignment:
Q  235 atttggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaaatatgtgt 292  Q
    ||||| ||||| ||||||||||||||||| || |||||||||||||| ||| ||||||    
T  49822607 atttgatgggatccatgtgaattttaaccaatcaaagagagtgtgttgaaaaatgtgt 49822664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 1366857 - 1366797
Alignment:
Q  26 tttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    |||||||||||||| |||||||| ||||||| |||||||| |||||  || ||||||||||    
T  1366857 tttatcactggcctcttttcattcccagagctgagcctccaaattcgtagagacggccctg 1366797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 5695799 - 5695747
Alignment:
Q  171 acatactctcttcgattggttaaaattcacacgagactcatcaaatttatatg 223  Q
    |||||||||||| ||||| |||||||||| | ||||| |||||||||||||||    
T  5695799 acatactctctttgattgtttaaaattcatatgagacccatcaaatttatatg 5695747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 263
Target Start/End: Complemental strand, 33422751 - 33422663
Alignment:
Q  175 actctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaacc 263  Q
    ||||||||  ||| ||||||||||| ||||| | || ||||||| |||| ||||||||| ||||||||| | |||| ||||||| ||||    
T  33422751 actctcttttatttgttaaaattcatacgagtcccaccaaatttgtatggaacccacataatttggtggaaaccatatgaatttcaacc 33422663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 40668943 - 40669054
Alignment:
Q  170 aacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatga-tttggtgggacccatgtgaattttaaccgatta 268  Q
    |||| |||||||| |||||||||||| ||||| | | |||| |||| |||| ||  ||||| || | |||||||| |||| |||||||||||||| || |    
T  40668943 aacacactctctttgattggttaaaactcacatgggtctca-caaaattatgtgggacccatataaatttggtggaacccgtgtgaattttaaccaatca 40669041  T
Q  269 aagagagtgtgtt 281  Q
    |||||||||||||    
T  40669042 aagagagtgtgtt 40669054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 41697120 - 41697072
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaat 69  Q
    ||||||||||||||| ||| |||||||| |||||||||||| |||||||    
T  41697120 ttgattttatcactgacctcttttcattcccagagccgagcttccgaat 41697072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 52127496 - 52127460
Alignment:
Q  50 ccagagccgagcctccgaattctcagggacggccctg 86  Q
    |||||||||||||||||||||||||||||||| ||||    
T  52127496 ccagagccgagcctccgaattctcagggacggtcctg 52127460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 15366480 - 15366542
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaatt 197  Q
    ||||||||||||||||||| ||| | | ||||| ||||| ||||| || ||||||||||||||    
T  15366480 aatgctagcaacacacattctaagacacactttccaacacactctttttgattggttaaaatt 15366542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 281
Target Start/End: Original strand, 38663730 - 38663776
Alignment:
Q  235 atttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt 281  Q
    |||||||||| |||||||||||||||||| |||||| ||||| ||||    
T  38663730 atttggtgggtcccatgtgaattttaaccaattaaaaagagtatgtt 38663776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 292
Target Start/End: Complemental strand, 2542762 - 2542705
Alignment:
Q  235 atttggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaaatatgtgt 292  Q
    |||||||||| | ||||| |||||||||| || |||||||||||||| ||| ||||||    
T  2542762 atttggtgggcctcatgtaaattttaaccaatcaaagagagtgtgttgaaaaatgtgt 2542705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 7444259 - 7444324
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattca 199  Q
    |||||||||||||||||||||||||| | | ||||||||| | | ||||  || ||||||||||||    
T  7444259 aaatgctagcaacacacattttaacacacatttttcaacacattttctttaatcggttaaaattca 7444324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 292
Target Start/End: Complemental strand, 16661862 - 16661818
Alignment:
Q  248 catgtgaattttaaccgattaaagagagtgtgttaaaatatgtgt 292  Q
    ||||||||||||||||||| ||||||| |||||| ||| ||||||    
T  16661862 catgtgaattttaaccgatcaaagagaatgtgttgaaaaatgtgt 16661818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 261
Target Start/End: Original strand, 45925161 - 45925213
Alignment:
Q  209 catcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaa 261  Q
    |||||||||||||||  |||||||| |||||||| ||| ||| ||||||||||    
T  45925161 catcaaatttatatgggacccacataatttggtgagactcatatgaattttaa 45925213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 7e-37; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 134 - 280
Target Start/End: Original strand, 35357295 - 35357441
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    |||||||||||||||||||| ||||||||| ||||||||| |||||||| |||||||||||| ||||| | ||  || ||||||||||||  ||  ||||    
T  35357295 aaatgctagcaacacacattctaacaaatatttttcaacacactctctttgattggttaaaactcacatgtgaaccaccaaatttatatgggacttacat 35357394  T
Q  234 gatttggtgggacccatgtgaattttaaccgattaaagagagtgtgt 280  Q
    |||||||| ||||||||||||||||||||| || |||||||||||||    
T  35357395 gatttggtaggacccatgtgaattttaaccaatcaaagagagtgtgt 35357441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 134 - 275
Target Start/End: Original strand, 36480685 - 36480826
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    |||||||| ||||||||||||||||| |  |||| ||||| |||||||| |||||||||||||||||| | ||| || ||||||||||||  ||||||||    
T  36480685 aaatgctaacaacacacattttaacacaccctttccaacacactctctttgattggttaaaattcacatgggacccaacaaatttatatgggacccacat 36480784  T
Q  234 gatttggtgggacccatgtgaattttaaccgattaaagagag 275  Q
    ||||||||||||||||||||||||||| || || ||||||||    
T  36480785 gatttggtgggacccatgtgaattttagccaatcaaagagag 36480826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 134 - 262
Target Start/End: Original strand, 14345129 - 14345257
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    ||||| |||||||||| ||||||||| ||| ||||||||| ||| |||| ||||||||||||| |||| ||||| || ||||||||||||  ||||||||    
T  14345129 aaatgttagcaacacatattttaacacatatttttcaacacactttctttgattggttaaaatccacatgagacccaccaaatttatatgggacccacat 14345228  T
Q  234 gatttggtgggacccatgtgaattttaac 262  Q
    ||||||||||||  |||||||||||||||    
T  14345229 gatttggtgggattcatgtgaattttaac 14345257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 38681076 - 38681010
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctga 87  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  38681076 ttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccctga 38681010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 170 - 282
Target Start/End: Original strand, 11532449 - 11532561
Alignment:
Q  170 aacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaa 269  Q
    |||||||||| || ||||||| ||||||||||| |||| ||  |||||||||||  | |||||||||||||||| ||||||||||||||||||| || ||    
T  11532449 aacatactctttttgattggtcaaaattcacacaagacccactaaatttatatgggatccacatgatttggtggaacccatgtgaattttaaccaatcaa 11532548  T
Q  270 agagagtgtgtta 282  Q
    |||||||||||||    
T  11532549 agagagtgtgtta 11532561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 169 - 293
Target Start/End: Complemental strand, 31205495 - 31205369
Alignment:
Q  169 caacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgatta 268  Q
    ||||| |||||||| ||||||| |||||||||| ||||| || ||| ||||||||  ||||||||||||||||  ||||||||| |||||||||| || |    
T  31205495 caacacactctctttgattggtcaaaattcacatgagacccaccaattttatatgggacccacatgatttggtaagacccatgtaaattttaaccaatca 31205396  T
Q  269 aagagagtgtgtt--aaaatatgtgtt 293  Q
    |||||||||||||  ||||||||||||    
T  31205395 aagagagtgtgttggaaaatatgtgtt 31205369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 8073322 - 8073256
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctga 87  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8073322 ttgattttatcactgacctcttttcatttccagagccgagcctccgaattctcagggacggccctga 8073256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 36716004 - 36715942
Alignment:
Q  24 attttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  36716004 attttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccctg 36715942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 54619186 - 54619120
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctga 87  Q
    |||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  54619186 ttgattttatcattggcttcttttcatttccagagccgagcctccgaattctcagggacggccctga 54619120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 21582895 - 21582960
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||    
T  21582895 ttgattttatcactggcctcttttcattcccaaagccgagcctccgaattctcagggacggccctg 21582960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 27078551 - 27078486
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  27078551 ttgattttatcactgacctcttttcatttccagagccaagcctccgaattctcagggacggccctg 27078486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 27084348 - 27084283
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  27084348 ttgattttatcactgacctcttttcatttccagagccaagcctccgaattctcagggacggccctg 27084283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 47467807 - 47467872
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  47467807 ttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccctg 47467872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 185 - 292
Target Start/End: Complemental strand, 32881107 - 32881000
Alignment:
Q  185 attggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaa 284  Q
    ||||||||||||| ||||||||| || ||||||||||||  | ||||||||||| ||||||||||||||||| |||||| || || |||||| |||| ||    
T  32881107 attggttaaaatttacacgagacccaccaaatttatatgggatccacatgattttgtgggacccatgtgaatattaaccaatcaaggagagtatgttgaa 32881008  T
Q  285 atatgtgt 292  Q
    | ||||||    
T  32881007 aaatgtgt 32881000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 163 - 262
Target Start/End: Complemental strand, 37341355 - 37341257
Alignment:
Q  163 acttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaac 262  Q
    ||||| ||||||||| | || |||||||||||||||||| |  || ||| |||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  37341355 actttccaacatactttatttgattggttaaaattcacatgtaacccattaaatttatatgagacccacatgatttggt-ggacccatgtgaattttaac 37341257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 165 - 276
Target Start/End: Complemental strand, 40554168 - 40554057
Alignment:
Q  165 ttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccg 264  Q
    ||||||| | |||||||| |||||||||||| ||||| |||   |||||||||||||||   | ||||||||||||||||||||||||||||||||| |     
T  40554168 ttttcaatacactctctttgattggttaaaactcacatgagttccatcaaatttatatgggtctcacatgatttggtgggacccatgtgaattttaatca 40554069  T
Q  265 attaaagagagt 276  Q
    ||| ||||||||    
T  40554068 attgaagagagt 40554057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 135 - 294
Target Start/End: Complemental strand, 3901652 - 3901498
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatg 234  Q
    ||||||| ||||| |||||| |||| | ||||||||||| |||||||| |||||||||||||||||| | | | || |||||  || ||     ||||||    
T  3901652 aatgctaacaacatacattt-aacacacacttttcaacacactctctttgattggttaaaattcacatgggtcccaccaaatc-atgtg-----cacatg 3901560  T
Q  235 atttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt--aaaatatgtgttg 294  Q
    ||||||||||||||||||||||||||||| || ||||||| ||||||  |||||||||||||    
T  3901559 atttggtgggacccatgtgaattttaaccaatcaaagagaatgtgttgaaaaatatgtgttg 3901498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 29620426 - 29620364
Alignment:
Q  24 attttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    |||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  29620426 attttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccctg 29620364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 37168490 - 37168556
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctga 87  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||| ||||    
T  37168490 ttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagggacggcgctga 37168556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 42098924 - 42098990
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctga 87  Q
    ||||||||||||||||||| ||||||||||| |||| |||||| |||||||||||||||||||||||    
T  42098924 ttgattttatcactggcctcttttcatttcccgagctgagccttcgaattctcagggacggccctga 42098990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 3953877 - 3953816
Alignment:
Q  24 attttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccct 85  Q
    |||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||    
T  3953877 attttatcactggcctcttttcatttccagagcggaacctccgaattctcagggacggccct 3953816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 54407138 - 54407073
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||| ||||| |||||||| ||||||||||||||||||||||| |||||||||||||    
T  54407138 ttgattttatcaccggcctcttttcattcccagagccgagcctccgaattcttagggacggccctg 54407073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 281
Target Start/End: Complemental strand, 36480867 - 36480721
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat- 233  Q
    ||||||||||||||||||||||||| | |||||||||||| ||||||| |||||| ||||||||||| | | | || |||| | || ||   |||| ||     
T  36480867 aatgctagcaacacacattttaacacacacttttcaacattctctctttgattggctaaaattcacatgggtcccaccaaa-tcatgtgggtcccatata 36480769  T
Q  234 gatttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt 281  Q
     ||||| |||| |||||||||||||||||| || ||||||||||||||    
T  36480768 aatttgttgggtcccatgtgaattttaaccaatcaaagagagtgtgtt 36480721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 36606087 - 36606149
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggcc 83  Q
    ||||||||||||||| ||| ||||||||||||||||||| |||||||||| ||||||||||||    
T  36606087 ttgattttatcactgacctcttttcatttccagagccgaacctccgaattttcagggacggcc 36606149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 185 - 294
Target Start/End: Original strand, 48543411 - 48543520
Alignment:
Q  185 attggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaa 284  Q
    |||| |||||||| ||| | ||| ||| |||||||||||  | |||| ||||||| || ||| |||||||||||||||| |||||||||||||| |||||    
T  48543411 attgattaaaatttacatgggacccattaaatttatatgggatccacgtgatttgatgagactcatgtgaattttaaccaattaaagagagtgtattaaa 48543510  T
Q  285 atatgtgttg 294  Q
    || |||||||    
T  48543511 atgtgtgttg 48543520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 50939217 - 50939152
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| ||||||||  |||||||||||| ||||||||| |||||||||||||    
T  50939217 ttgattttatcactggcctcttttcattctcagagccgagcccccgaattcttagggacggccctg 50939152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 3901566 - 3901618
Alignment:
Q  229 cacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt 281  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  3901566 cacatgatttggtgggacccatgtgaattttaaccaatcaaagagagtgtgtt 3901618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 40763397 - 40763493
Alignment:
Q  185 attggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt 281  Q
    ||||||||||||||||| ||||  |||||||||||||||  | |||||||||||||||| || || |||||||||||   |||||||||||| ||||    
T  40763397 attggttaaaattcacatgagatccatcaaatttatatgggatccacatgatttggtggaactcaggtgaattttaataaattaaagagagtatgtt 40763493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 43207217 - 43207157
Alignment:
Q  26 tttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    |||||||||||||| |||||||| |||||||||||||||| |||||| |||||||||||||    
T  43207217 tttatcactggcctcttttcattcccagagccgagcctccaaattcttagggacggccctg 43207157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 263
Target Start/End: Complemental strand, 19158788 - 19158691
Alignment:
Q  165 ttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaacc 263  Q
    ||||||| | ||||| || |||| ||||||||||| | || || || |||||||||||||||||||||| |||| ||||||| ||||||||||||||||    
T  19158788 ttttcaatacactctttttgattagttaaaattcatatga-acccaccaaatttatatgaaacccacataatttagtgggactcatgtgaattttaacc 19158691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 281
Target Start/End: Complemental strand, 29955170 - 29955052
Alignment:
Q  163 acttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaac 262  Q
    ||||||||| | |||||  | |||| ||||||||||| | | ||  |||||||||||| ||  |||||||||||||| ||||||||||||||||||||||    
T  29955170 acttttcaatacactcttcttgattagttaaaattcatatgggatccatcaaatttatgtgggacccacatgatttgatgggacccatgtgaattttaac 29955071  T
Q  263 cgattaaagagagtgtgtt 281  Q
    | || ||| | ||||||||    
T  29955070 caatcaaaaaaagtgtgtt 29955052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 281
Target Start/End: Complemental strand, 30004324 - 30004206
Alignment:
Q  163 acttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaac 262  Q
    ||||||||| | |||||  | |||| ||||||||||| | | ||  |||||||||||| ||  |||||||||||||| ||||||||||||||||||||||    
T  30004324 acttttcaatacactcttcttgattagttaaaattcatatgggatccatcaaatttatgtgggacccacatgatttgatgggacccatgtgaattttaac 30004225  T
Q  263 cgattaaagagagtgtgtt 281  Q
    | || ||| | ||||||||    
T  30004224 caatcaaaaaaagtgtgtt 30004206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 44708599 - 44708665
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctga 87  Q
    ||||||||||||||||||| |||||||| ||||||  ||||||||||||||| ||||||||| ||||    
T  44708599 ttgattttatcactggcctcttttcattcccagagttgagcctccgaattcttagggacggctctga 44708665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 50258607 - 50258537
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctgatgct 91  Q
    |||||||||||||||  || ||||| || ||||||||||||||||||||||||||| ||||||||| ||||    
T  50258607 ttgattttatcactgatctcttttcgttcccagagccgagcctccgaattctcaggaacggccctgctgct 50258537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 165 - 278
Target Start/End: Complemental strand, 19560759 - 19560646
Alignment:
Q  165 ttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccg 264  Q
    ||||||||| |||||||| ||||||||||||  |||| | ||  ||  |||||| ||||  ||||||||||||||||||||||||| ||||||| ||||     
T  19560759 ttttcaacacactctctttgattggttaaaaagcacaagggatccactaaatttgtatgggacccacatgatttggtgggacccatatgaatttcaacca 19560660  T
Q  265 attaaagagagtgt 278  Q
    || |||| ||||||    
T  19560659 atcaaagcgagtgt 19560646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 34290619 - 34290554
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||| | | |||||||| ||||||||||||||||||||||| | |||||||||||    
T  34290619 ttgattttatcactgacttcttttcattcccagagccgagcctccgaattcttaaggacggccctg 34290554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 48720494 - 48720429
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||  ||| |||||||| |||||||||||||||| |||||| |||||||||||||    
T  48720494 ttgattttatcacttacctcttttcattcccagagccgagcctcccaattcttagggacggccctg 48720429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 229 - 305
Target Start/End: Complemental strand, 13540242 - 13540166
Alignment:
Q  229 cacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaaatatgtgttgttatcattcct 305  Q
    ||||||||||||||||| |||||| | ||| |||| || ||||||||||||||||||| ||||||| || |||||||    
T  13540242 cacatgatttggtgggagccatgttagtttaaaccaatcaaagagagtgtgttaaaatgtgtgttgctaacattcct 13540166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 262
Target Start/End: Original strand, 13777683 - 13777756
Alignment:
Q  189 gttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaac 262  Q
    |||||||||||||||| | ||||| |||||||||| ||||||| |||| |||||| || ||| |||||||||||    
T  13777683 gttaaaattcacacgaaattcatcgaatttatatggaacccacgtgatatggtggaacgcatatgaattttaac 13777756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 16729319 - 16729206
Alignment:
Q  149 acattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggaccc 248  Q
    ||||| ||||| | |||||||| |||| ||| ||  ||||||||| ||| ||| | ||||||||||||||| |||  | ||| ||||||||||||||| |    
T  16729319 acattctaacatacacttttcagcatattcttttttattggttaacatttacatgtgactcatcaaatttaaatgggatccatatgatttggtgggactc 16729220  T
Q  249 atgtgaattttaac 262  Q
    ||||| ||||||||    
T  16729219 atgtgcattttaac 16729206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 53506866 - 53506802
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| | |||||| |||||||||||||| |||||||| | |||||||||||    
T  53506866 ttgattttatcactggcctctcttcattcccagagccgagccttcgaattctta-ggacggccctg 53506802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 201
Target Start/End: Complemental strand, 37189301 - 37189238
Alignment:
Q  138 gctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcaca 201  Q
    |||||||||||||||||||| | | | |||| |||| |||||||| ||||||||||||||||||    
T  37189301 gctagcaacacacattttaatatacattttttaacagactctctttgattggttaaaattcaca 37189238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 48157251 - 48157310
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacg 80  Q
    ||||||||||||||||||| |||| ||| || || ||||||||||||||||| |||||||    
T  48157251 ttgattttatcactggcctctttttattcccggaaccgagcctccgaattcttagggacg 48157310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 53149297 - 53149230
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctgat 88  Q
    |||||||||||||||| || |||||||| || || | |||||||||||||||||| ||||||| ||||    
T  53149297 ttgattttatcactggtctcttttcattccccgaactgagcctccgaattctcagagacggccgtgat 53149230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 18372605 - 18372671
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctga 87  Q
    ||||||||||||||| ||| |||||||| |||| | ||||||||||||||||||  ||||| |||||    
T  18372605 ttgattttatcactgacctcttttcattcccagtgtcgagcctccgaattctcaaagacggtcctga 18372671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 201
Target Start/End: Original strand, 26986272 - 26986338
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcaca 201  Q
    |||| |||||||||| ||||||||| ||||||||||||| | |||| | |||| |||||||||||||    
T  26986272 aatgttagcaacacatattttaacatatacttttcaacacattctccttgattagttaaaattcaca 26986338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 31205348 - 31205410
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaatt 197  Q
    ||||||| |||||||| |||||||| ||| ||| ||||| |||||||| ||||||||||||||    
T  31205348 aatgctaacaacacacgttttaacacatattttccaacacactctctttgattggttaaaatt 31205410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 293
Target Start/End: Original strand, 51541223 - 51541384
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    |||||||||||||| || || ||| | | | ||||||| | ||| | || |||||||||||| ||||| | ||| || ||||  |||||   ||||||||    
T  51541223 aaatgctagcaacaaaccttctaatatacatttttcaatacactatttttgattggttaaaactcacatgtgacccaccaaaagtatataggacccacat 51541322  T
Q  234 gatttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt--aaaatatgtgtt 293  Q
    ||||||||||||| ||| |||||||||||| || ||| | ||||| ||  ||||||||||||    
T  51541323 gatttggtgggactcatctgaattttaaccaatcaaaaaaagtgtattgaaaaatatgtgtt 51541384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 3300769 - 3300724
Alignment:
Q  249 atgtgaattttaaccgattaaagagagtgtgttaaaatatgtgttg 294  Q
    |||||||||||||||||| ||||||| ||||||||||| |||||||    
T  3300769 atgtgaattttaaccgatcaaagagaatgtgttaaaatgtgtgttg 3300724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 173
Target Start/End: Original strand, 36046321 - 36046362
Alignment:
Q  132 ataaatgctagcaacacacattttaacaaatacttttcaaca 173  Q
    |||||||||||||||||||||||||||| |||||||| ||||    
T  36046321 ataaatgctagcaacacacattttaacacatactttttaaca 36046362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 1458697 - 1458633
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattca 199  Q
    ||||||| ||||||||||| ||||||| ||||||||||| |||||  | |||||||| |||||||    
T  1458697 aatgctaacaacacacattctaacaaacacttttcaacacactcttcttgattggtttaaattca 1458633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 262
Target Start/End: Original strand, 35527127 - 35527163
Alignment:
Q  226 acccacatgatttggtgggacccatgtgaattttaac 262  Q
    |||||||||||||||||||| ||||||||||||||||    
T  35527127 acccacatgatttggtgggatccatgtgaattttaac 35527163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 261
Target Start/End: Original strand, 48240402 - 48240453
Alignment:
Q  209 catcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaa 261  Q
    ||||||||||||||| ||||||||||||||||| ||| |||||| ||||||||    
T  48240402 catcaaatttatatggaacccacatgatttggt-ggatccatgtaaattttaa 48240453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 292
Target Start/End: Complemental strand, 799314 - 799263
Alignment:
Q  241 tgggacccatgtgaattttaaccgattaaagagagtgtgttaaaatatgtgt 292  Q
    |||||||||||||||||| |||| ||||||||||| ||||| ||| ||||||    
T  799314 tgggacccatgtgaatttaaaccaattaaagagagcgtgttgaaaaatgtgt 799263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 138 - 201
Target Start/End: Original strand, 29955020 - 29955083
Alignment:
Q  138 gctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcaca 201  Q
    |||||||||| | ||||||| | ||||||||||||| ||| | || ||||||||||||||||||    
T  29955020 gctagcaacatatattttaatacatacttttcaacacactttttttgattggttaaaattcaca 29955083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 138 - 201
Target Start/End: Original strand, 30004174 - 30004237
Alignment:
Q  138 gctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcaca 201  Q
    |||||||||| | ||||||| | ||||||||||||| ||| | || ||||||||||||||||||    
T  30004174 gctagcaacatatattttaatacatacttttcaacacactttttttgattggttaaaattcaca 30004237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 134 - 201
Target Start/End: Original strand, 32880975 - 32881042
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcaca 201  Q
    ||||||||  ||||||||||||| || | | |||||||||||||||| | |||||||||| |||||||    
T  32880975 aaatgctaagaacacacattttatcacacatttttcaacatactctccttgattggttaatattcaca 32881042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 292
Target Start/End: Original strand, 4276981 - 4277115
Alignment:
Q  163 acttttcaacatactctcttcgattggttaaaattcacacga-----gactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaatt 257  Q
    ||||||||| ||||||| || ||||| |||||||||||| ||     ||| || ||||||||||||  |||||||||||||  || ||||||| | |||     
T  4276981 acttttcaatatactctttttgattgattaaaattcacatgacatgagacccaccaaatttatatgggacccacatgatttaatgagacccatataaata 4277080  T
Q  258 ttaaccgattaaagagagtgtgttaaaatatgtgt 292  Q
    |||| | || ||||| |||||||| ||| ||||||    
T  4277081 ttaatcaatcaaagaaagtgtgttgaaaaatgtgt 4277115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 36007515 - 36007449
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcaca 201  Q
    |||| ||||||||||||||||||||   ||||||||||| | | |||| || |||||||||||||||    
T  36007515 aatgttagcaacacacattttaacattcacttttcaacacattttctttgagtggttaaaattcaca 36007449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 1458575 - 1458620
Alignment:
Q  213 aaatttatatgaaacccacatgatttggtgggacccatgtgaattt 258  Q
    ||||| |||||| |||||||||||||||||| |||||||| |||||    
T  1458575 aaattcatatgagacccacatgatttggtggaacccatgtaaattt 1458620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 19554468 - 19554403
Alignment:
Q  213 aaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgt 278  Q
    |||||| ||||  ||||||||| ||||||||||||||| |||||||||| | || |||||| ||||    
T  19554468 aaatttgtatgggacccacatggtttggtgggacccatatgaattttaatcaatcaaagagggtgt 19554403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 293
Target Start/End: Complemental strand, 28576496 - 28576454
Alignment:
Q  247 ccatgtgaattttaaccgattaaagagagtgtgttaaaatatgtgtt 293  Q
    |||||||||||||||||||||||    ||||||||||||||||||||    
T  28576496 ccatgtgaattttaaccgattaa----agtgtgttaaaatatgtgtt 28576454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 288
Target Start/End: Complemental strand, 36026833 - 36026800
Alignment:
Q  255 attttaaccgattaaagagagtgtgttaaaatat 288  Q
    |||||||||||||||||||| |||||||||||||    
T  36026833 attttaaccgattaaagagaatgtgttaaaatat 36026800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 258
Target Start/End: Original strand, 45332573 - 45332646
Alignment:
Q  185 attggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattt 258  Q
    ||||||||||||||||| |  |  || ||||||||||||  ||||||||||||||||  ||||||||| |||||    
T  45332573 attggttaaaattcacatggaatccaccaaatttatatgggacccacatgatttggtcagacccatgtaaattt 45332646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 263
Target Start/End: Complemental strand, 9145477 - 9145449
Alignment:
Q  235 atttggtgggacccatgtgaattttaacc 263  Q
    |||||||||||||||||||||||||||||    
T  9145477 atttggtgggacccatgtgaattttaacc 9145449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 201
Target Start/End: Original strand, 29212236 - 29212304
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatac-ttttcaacatactctcttcgattggttaaaattcaca 201  Q
    |||||||| |||||||||||||||||| ||| |||| || | | |||||| ||||| ||||||||||||    
T  29212236 aaatgctaccaacacacattttaacaagtactttttaaaaacattctctttgattgcttaaaattcaca 29212304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 175
Target Start/End: Complemental strand, 35415129 - 35415089
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacata 175  Q
    ||||||| ||||||||||||||||| | |||||||||||||    
T  35415129 aatgctaacaacacacattttaacacacacttttcaacata 35415089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 7e-34; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 134 - 303
Target Start/End: Original strand, 3235537 - 3235706
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    |||||||| ||||||||||||||||| | ||||| ||| | |||||||| |||||||||||||||||| ||||| ||||||||||| |||  ||||||||    
T  3235537 aaatgctaacaacacacattttaacacacactttccaatacactctctttgattggttaaaattcacatgagacccatcaaatttacatgggacccacat 3235636  T
Q  234 gatttggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaaatatgtgttgttatcattc 303  Q
      || ||| ||||||||||||||||||||| || ||| ||||||||||  ||| ||||||| || |||||    
T  3235637 atttgggtcggacccatgtgaattttaaccaatcaaaaagagtgtgttggaatgtgtgttgctagcattc 3235706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 134 - 281
Target Start/End: Original strand, 12275718 - 12275863
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    |||||||||||||||||||| ||||| |  |||| ||||| ||||||||| ||||||||||| ||||| | ||| || ||||||||||||  ||||||||    
T  12275718 aaatgctagcaacacacattctaacaca--ctttccaacacactctcttcaattggttaaaaatcacatgggacccaccaaatttatatgggacccacat 12275815  T
Q  234 gatttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt 281  Q
    ||||||||||||||||| |||||||||||| ||  |||||||||||||    
T  12275816 gatttggtgggacccatatgaattttaaccaatcgaagagagtgtgtt 12275863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 163 - 305
Target Start/End: Original strand, 2276284 - 2276426
Alignment:
Q  163 acttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaac 262  Q
    ||||||||||| |||||||| |||||||||||||||||| |   | || |||||||||| |  |||||||| |||||||||||  |||||||||||||||    
T  2276284 acttttcaacacactctctttgattggttaaaattcacatggatcccaccaaatttataagggacccacataatttggtgggattcatgtgaattttaac 2276383  T
Q  263 cgattaaagagagtgtgttaaaatatgtgttgttatcattcct 305  Q
    | |||||||| ||||||||||||| ||||||| || |||||||    
T  2276384 caattaaagatagtgtgttaaaatgtgtgttgctagcattcct 2276426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 170 - 276
Target Start/End: Original strand, 26862927 - 26863033
Alignment:
Q  170 aacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaa 269  Q
    |||| |||||| | |||||||||||||||||| | || ||| || ||||||||   |||||||||||||||||||||||||||||||||||||| |||||    
T  26862927 aacacactctccttgattggttaaaattcacatgggattcaccatatttatataggacccacatgatttggtgggacccatgtgaattttaaccaattaa 26863026  T
Q  270 agagagt 276  Q
    |||||||    
T  26863027 agagagt 26863033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 12596272 - 12596207
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  12596272 ttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggccctg 12596207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 18776748 - 18776683
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18776748 ttgattttatcactgacctcttttcatttccagagccgagcctccgaattctcagggacggccctg 18776683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 25010546 - 25010611
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  25010546 ttgattttatcactggcctcttttcatttccagagccgagcctccgaattcttagggacggccctg 25010611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 143 - 294
Target Start/End: Original strand, 46074042 - 46074193
Alignment:
Q  143 caacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtg 242  Q
    ||||| ||||||||| | | |||||| |||| ||| ||||  || | |||||||| ||| | ||| ||| |||||||||||  | |||| ||||||| ||    
T  46074042 caacaaacattttaatacacactttttaacacactttctttaatcgattaaaatttacatgggacccattaaatttatatgggatccacgtgatttgatg 46074141  T
Q  243 ggacccatgtgaattttaaccgattaaagagagtgtgttaaaatatgtgttg 294  Q
    |||| |||||||||||||||| |||||||||||||||||||||| |||||||    
T  46074142 ggactcatgtgaattttaaccaattaaagagagtgtgttaaaatgtgtgttg 46074193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 155 - 281
Target Start/End: Original strand, 10056622 - 10056748
Alignment:
Q  155 taacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtga 254  Q
    ||||| ||||||||||||| ||||| || ||||||| |||||||||| |  || || ||| ||||||||  ||||||||||||||| ||||||||| ||     
T  10056622 taacacatacttttcaacacactctttttgattggtcaaaattcacatggaacccaccaattttatatgggacccacatgatttggagggacccatatgg 10056721  T
Q  255 attttaaccgattaaagagagtgtgtt 281  Q
    ||||||||  |||||||||||||||||    
T  10056722 attttaactaattaaagagagtgtgtt 10056748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 203 - 281
Target Start/End: Complemental strand, 11201385 - 11201307
Alignment:
Q  203 gagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt 281  Q
    ||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||  || ||||||||||||||    
T  11201385 gagacccatcaaatttatatgagacccacgtgatttggtgggacccatgtgaattttaactaatgaaagagagtgtgtt 11201307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 29077339 - 29077404
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  29077339 ttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccctg 29077404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 40357362 - 40357303
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacg 80  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  40357362 ttgattttatcactgaccttttttcatttccagagccgagcctccgaattctcaaggacg 40357303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 8171522 - 8171460
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggcc 83  Q
    ||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||    
T  8171522 ttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggcc 8171460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 10329392 - 10329327
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||| |||||||||    
T  10329392 ttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttaggaacggccctg 10329327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 20091262 - 20091197
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||||| |||||||||||||    
T  20091262 ttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttagggacggccctg 20091197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 23551053 - 23550986
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctgat 88  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||||| ||||||| |||||||    
T  23551053 ttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttagggacgaccctgat 23550986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 12275899 - 12275834
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattca 199  Q
    |||||||||||||||||||| ||||| | ||||| ||||| |||||||||||||||||||||||||    
T  12275899 aaatgctagcaacacacattctaacacacactttccaacacactctcttcgattggttaaaattca 12275834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 24525664 - 24525599
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||| ||||| |||||||| ||||||||||||||||||||||| ||||||| |||||    
T  24525664 ttgattttatcacaggcctcttttcattcccagagccgagcctccgaattcttagggacgaccctg 24525599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 26254113 - 26254178
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||| ||| |||||||| ||| |||||||||||||||||||||||||| ||||||    
T  26254113 ttgattttatcactgacctcttttcattcccaaagccgagcctccgaattctcagggacagccctg 26254178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 28749830 - 28749895
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    |||||||||||| ||| || |||||||| ||||||||||||||||||||| |||||||||||||||    
T  28749830 ttgattttatcattggtctcttttcattcccagagccgagcctccgaattttcagggacggccctg 28749895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 48983821 - 48983756
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    |||||||||||| |||||| ||||||||  |||||||||||||||||||||| |||||||||||||    
T  48983821 ttgattttatcattggcctcttttcattctcagagccgagcctccgaattcttagggacggccctg 48983756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 84
Target Start/End: Original strand, 8239809 - 8239869
Alignment:
Q  24 attttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccc 84  Q
    ||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||||    
T  8239809 attttatcattggcctcttttcatttccagagccgagcctccaaattcttagggacggccc 8239869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 5443689 - 5443623
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcaca 201  Q
    ||||||||||||||||||| ||||| | | ||||||||||||| |||| ||||||||||||||||||    
T  5443689 aatgctagcaacacacattctaacacacatttttcaacatactttctttgattggttaaaattcaca 5443623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 5452734 - 5452668
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcaca 201  Q
    ||||||||||||||||||| ||||| | | ||||||||||||| |||| ||||||||||||||||||    
T  5452734 aatgctagcaacacacattctaacacacatttttcaacatactttctttgattggttaaaattcaca 5452668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 228 - 302
Target Start/End: Original strand, 18089774 - 18089848
Alignment:
Q  228 ccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaaatatgtgttgttatcatt 302  Q
    |||||| ||||||| ||||||||||||||||||||| |  ||||||||||||||||||  ||||| |||||||||    
T  18089774 ccacataatttggttggacccatgtgaattttaaccaaccaaagagagtgtgttaaaaagtgtgtagttatcatt 18089848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 263
Target Start/End: Original strand, 40134402 - 40134493
Alignment:
Q  170 aacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaacc 263  Q
    |||| |||||||| |||||||  ||||||||| | |||  | ||||||||||||  |||||||| |||||||||||||||||||||||||||||    
T  40134402 aacacactctctttgattggt--aaattcacaggggacctaccaaatttatatgggacccacataatttggtgggacccatgtgaattttaacc 40134493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 281
Target Start/End: Original strand, 49106913 - 49107030
Alignment:
Q  163 acttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaac 262  Q
    ||||| ||||| || ||||| ||||| |||||||||||| | | |  | ||||||||||||   ||| ||||||||||||||||| ||||||||||||||    
T  49106913 actttccaacacacactctttgattgattaaaattcacatgggtcctaccaaatttatatggt-cccgcatgatttggtgggacctatgtgaattttaac 49107011  T
Q  263 cgattaaagagagtgtgtt 281  Q
    | || ||||||||||||||    
T  49107012 caatcaaagagagtgtgtt 49107030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 19692214 - 19692279
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    |||||||||||||||| |  ||||||||||||||||||||| |||||||||| ||||| |||||||    
T  19692214 ttgattttatcactggacacttttcatttccagagccgagcttccgaattcttagggagggccctg 19692279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 184 - 281
Target Start/End: Complemental strand, 24516667 - 24516570
Alignment:
Q  184 gattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt 281  Q
    ||||| |||||||||||| | ||  ||  ||||||| ||| || |||||||||||||||||||||||||||||||||||| || ||||| ||| ||||    
T  24516667 gattgattaaaattcacatgggatccactaaatttagatggaatccacatgatttggtgggacccatgtgaattttaaccaatcaaagaaagtatgtt 24516570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 47984950 - 47984885
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||| | |||||||| |||||||||||||  |||||||| |||||||||||||    
T  47984950 ttgattttatcactggcatcttttcattcccagagccgagccaacgaattcttagggacggccctg 47984885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 293
Target Start/End: Complemental strand, 2417242 - 2417103
Alignment:
Q  151 attttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccat 250  Q
    ||||||||| ||| |||| |||| | || ||| ||||  |||||||||||  |||||||||||||||||||||  | |||||||||||| | ||| ||||    
T  2417242 attttaacacatattttttaacacattcgctttgattaattaaaattcac--gagactcatcaaatttatatgggatccacatgatttgat-ggatccat 2417146  T
Q  251 gtgaattttaaccgattaaagagagtgtgttaaaatatgtgtt 293  Q
    ||||||||| |||  | || |||||||||||  ||||||||||    
T  2417145 gtgaattttgaccattcaacgagagtgtgtttgaatatgtgtt 2417103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 203
Target Start/End: Complemental strand, 26327811 - 26327737
Alignment:
Q  132 ataaatgctagcaacacacattttaacaaatacttttcaa--ca-tactctcttcgattggttaaaattcacacg 203  Q
    |||||||||||||||||| ||||||||| |||||||||||  || ||||||||| ||||| ||||||||||||||    
T  26327811 ataaatgctagcaacacatattttaacacatacttttcaatgcagtactctctttgattgcttaaaattcacacg 26327737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 201
Target Start/End: Complemental strand, 49107066 - 49106999
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcaca 201  Q
    |||||||| ||||| ||||| ||||| | ||||||||||| |||||||| ||||||||||||||||||    
T  49107066 aaatgctaccaacatacattctaacacacacttttcaacacactctctttgattggttaaaattcaca 49106999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 26863073 - 26863007
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcaca 201  Q
    ||||||||||||||||||||||| | | |||||||| || ||||||||  |||||||||||||||||    
T  26863073 aatgctagcaacacacattttaatacacacttttcatcaaactctctttaattggttaaaattcaca 26863007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 38414858 - 38414793
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    |||||||||| ||| | || ||||||||||||||| |||||||||||||||| ||||||| |||||    
T  38414858 ttgattttatgactagtctcttttcatttccagagtcgagcctccgaattcttagggacgaccctg 38414793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 263
Target Start/End: Complemental strand, 640990 - 640911
Alignment:
Q  184 gattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaacc 263  Q
    |||| ||||||||||||| ||||   | |||||||||||| || ||||||||||||||| ||||||| | ||||||||||    
T  640990 gattcgttaaaattcacatgagatctaccaaatttatatggaatccacatgatttggtgtgacccatataaattttaacc 640911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 40134544 - 40134480
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcaca 201  Q
    |||||||||||| |||||||||||| | ||||| ||||| |||||||  ||||||||||||||||||    
T  40134544 aatgctagcaacccacattttaacacacactttccaacacactctct--gattggttaaaattcaca 40134480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 281
Target Start/End: Complemental strand, 2276337 - 2276291
Alignment:
Q  235 atttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt 281  Q
    ||||||||||| ||||||||||||||||| || ||||||||||||||    
T  2276337 atttggtgggatccatgtgaattttaaccaatcaaagagagtgtgtt 2276291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 293
Target Start/End: Original strand, 7526137 - 7526255
Alignment:
Q  175 actctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagaga 274  Q
    |||| ||| |||| ||||||||||||| |   | || ||||||||||||| |||  |||||||||||| ||| ||||| |||||||||| || ||| | |    
T  7526137 actcactttgatttgttaaaattcacatggatcccaccaaatttatatgagaccagcatgatttggtgagacacatgtaaattttaaccaatcaaaaaaa 7526236  T
Q  275 gtgtgttaaaatatgtgtt 293  Q
     ||||||| ||||||||||    
T  7526237 atgtgttacaatatgtgtt 7526255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 286
Target Start/End: Complemental strand, 29356984 - 29356926
Alignment:
Q  228 ccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaaat 286  Q
    |||| ||| ||||||| ||||||||||||||||||| || ||||||||||||| |||||    
T  29356984 ccacgtgaattggtggaacccatgtgaattttaaccaatcaaagagagtgtgtaaaaat 29356926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 262
Target Start/End: Complemental strand, 18802922 - 18802873
Alignment:
Q  213 aaatttatatgaaacccacatgatttggtgggacccatgtgaattttaac 262  Q
    ||||||||||| |||| |||| ||||||||||||| ||||||||||||||    
T  18802922 aaatttatatggaaccaacattatttggtgggacctatgtgaattttaac 18802873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 140 - 281
Target Start/End: Original strand, 26647675 - 26647815
Alignment:
Q  140 tagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttg 239  Q
    |||||| |||| || ||||| | | ||||||||||| ||| ||  ||||||||||||||||| |||||| |||||| |||||||| |||||| | |||||    
T  26647675 tagcaatacacgttctaacacacatttttcaacatagtctttttcattggttaaaattcacatgagact-atcaaaattatatgagacccacgtaatttg 26647773  T
Q  240 gtgggacccatgtgaattttaaccgattaaagagagtgtgtt 281  Q
     | | ||  ||||||||| ||||| || ||| | ||||||||    
T  26647774 atagaacttatgtgaattctaaccaatcaaaaatagtgtgtt 26647815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 138 - 195
Target Start/End: Complemental strand, 31042460 - 31042403
Alignment:
Q  138 gctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaa 195  Q
    |||||||||||| ||||||||| | |||||| || |||||||||| ||||||||||||    
T  31042460 gctagcaacacatattttaacatacactttttaatatactctctttgattggttaaaa 31042403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 272
Target Start/End: Original strand, 47497747 - 47497816
Alignment:
Q  203 gagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaaga 272  Q
    ||||| || ||||||| ||||  |||||||| |||||||||||| |||||||||||||||| || |||||    
T  47497747 gagacccaccaaatttgtatgggacccacataatttggtgggactcatgtgaattttaaccaatcaaaga 47497816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 292
Target Start/End: Original strand, 7017142 - 7017222
Alignment:
Q  212 caaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaaatatgtgt 292  Q
    ||||||||||||  | |||||| ||||||| ||||  ||||||||||||||| || ||||||||||| || ||| ||||||    
T  7017142 caaatttatatgggatccacataatttggtaggacttatgtgaattttaaccaatcaaagagagtgtattgaaaaatgtgt 7017222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 292
Target Start/End: Original strand, 7032500 - 7032580
Alignment:
Q  212 caaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaaatatgtgt 292  Q
    ||||||||||||  | |||||| ||||||| ||||  ||||||||||||||| || ||||||||||| || ||| ||||||    
T  7032500 caaatttatatgggatccacataatttggtaggacttatgtgaattttaaccaatcaaagagagtgtattgaaaaatgtgt 7032580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 294
Target Start/End: Complemental strand, 26862962 - 26862914
Alignment:
Q  246 cccatgtgaattttaaccgattaaagagagtgtgttaaaatatgtgttg 294  Q
    |||||||||||||||||| || || |||||||||||||||| |||||||    
T  26862962 cccatgtgaattttaaccaatcaaggagagtgtgttaaaatgtgtgttg 26862914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 31042124 - 31042188
Alignment:
Q  141 agcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgag 205  Q
    ||||||||| ||||||||| | ||||||||| | | | |||| ||||||||||||||||||||||    
T  31042124 agcaacacatattttaacacacacttttcaatacattatctttgattggttaaaattcacacgag 31042188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 134 - 173
Target Start/End: Complemental strand, 22044955 - 22044916
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaaca 173  Q
    |||||||||||||||||| ||||||| |||||||||||||    
T  22044955 aaatgctagcaacacacaatttaacacatacttttcaaca 22044916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 292
Target Start/End: Original strand, 316389 - 316495
Alignment:
Q  186 ttggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaaa 285  Q
    |||||||||||||||| |||   || ||||||| ||||| |||||| |||||| |||| || |||||  |||||| || || ||||||| |||||| |||    
T  316389 ttggttaaaattcacatgagttccaccaaatttgtatgagacccacttgatttagtggaactcatgtagattttatccaatcaaagagaatgtgttgaaa 316488  T
Q  286 tatgtgt 292  Q
     ||||||    
T  316489 aatgtgt 316495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 294
Target Start/End: Original strand, 11201395 - 11201433
Alignment:
Q  256 ttttaaccgattaaagagagtgtgttaaaatatgtgttg 294  Q
    |||||||| |||||||||||||||||| |||||||||||    
T  11201395 ttttaaccaattaaagagagtgtgttagaatatgtgttg 11201433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 281
Target Start/End: Complemental strand, 12275798 - 12275752
Alignment:
Q  235 atttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt 281  Q
    |||||||||| ||||||||| |||||||| ||| |||||||||||||    
T  12275798 atttggtgggtcccatgtgatttttaaccaattgaagagagtgtgtt 12275752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 285
Target Start/End: Original strand, 38582001 - 38582079
Alignment:
Q  207 ctcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaaa 285  Q
    ||||||||||| |||||||| |||| |||||| ||| || | || | ||||||||||||| ||||||| | ||||||||    
T  38582001 ctcatcaaattcatatgaaaaccacgtgatttagtgagatctatataaattttaaccgatcaaagagaatatgttaaaa 38582079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 10955606 - 10955671
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||| ||||||| ||| | |||||| || |||| ||||||||||||||||| |||| ||||||    
T  10955606 ttgatttaatcactgacctctattcattccccgagctgagcctccgaattctcatggacagccctg 10955671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 45200533 - 45200484
Alignment:
Q  212 caaatttatatgaaacccacatgatttggtgggacccatgtgaattttaa 261  Q
    ||||||||||||| | |||||||||||||||| |||||| | ||||||||    
T  45200533 caaatttatatgagatccacatgatttggtggaacccatataaattttaa 45200484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 36129129 - 36129069
Alignment:
Q  235 atttggtgggacccatgtgaattttaaccgattaaagaga-gtgtgttaaaatatgtgttg 294  Q
    |||||||||||| |||||||||||||||| || ||| | | |||||||||||| |||||||    
T  36129129 atttggtgggactcatgtgaattttaaccaatcaaaaaaatgtgtgttaaaatgtgtgttg 36129069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 285
Target Start/End: Complemental strand, 46074109 - 46074065
Alignment:
Q  241 tgggacccatgtgaattttaaccgattaaagagagtgtgttaaaa 285  Q
    |||| ||||||| |||||||| |||||||||| ||||||||||||    
T  46074109 tgggtcccatgtaaattttaatcgattaaagaaagtgtgttaaaa 46074065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 3e-30; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 134 - 281
Target Start/End: Complemental strand, 2288760 - 2288613
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    |||||||||||||||||||| ||| | | |||||||||||  ||||||| |||||||||||||||||| | ||  |||||||||||||||  |||||  |    
T  2288760 aaatgctagcaacacacattctaaaagacacttttcaacaatctctctttgattggttaaaattcacatgggatccatcaaatttatatgggacccatgt 2288661  T
Q  234 gatttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt 281  Q
    |||||||||  |||||||| |||||||||| || ||||||||||||||    
T  2288660 gatttggtgaaacccatgtaaattttaaccaatcaaagagagtgtgtt 2288613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 134 - 281
Target Start/End: Complemental strand, 40696349 - 40696202
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    ||||||||||||||||| |||||||| | | ||| ||||| | ||||||  ||||||||||||| ||| | ||| || ||||| |||||  |||||||||    
T  40696349 aaatgctagcaacacacgttttaacacacattttgcaacacaatctctttcattggttaaaattaacatgcgacccaccaaatctatatagaacccacat 40696250  T
Q  234 gatttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt 281  Q
    |||||||||||||||||||||||||||||  || ||| ||||||||||    
T  40696249 gatttggtgggacccatgtgaattttaactaatcaaaaagagtgtgtt 40696202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 2952202 - 2952137
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2952202 ttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccctg 2952137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 134 - 278
Target Start/End: Complemental strand, 20271174 - 20271023
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacga-----gactcatcaaatttatatgaaacc 228  Q
    ||||| ||||||||||||||||||||   ||||||||||| |||||||| |||| ||||||||||||| ||     ||| ||| |||||||||||  |||    
T  20271174 aaatgttagcaacacacattttaacacgcacttttcaacacactctctttgattagttaaaattcacatgatttgggacccataaaatttatatgggacc 20271075  T
Q  229 cacatgatttggtgggacccatgtgaa--ttttaaccgattaaagagagtgt 278  Q
    ||||||||||||||||| |||||||||  |||||||| || |||||||||||    
T  20271074 cacatgatttggtgggatccatgtgaattttttaaccaatcaaagagagtgt 20271023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 134 - 278
Target Start/End: Complemental strand, 21057802 - 21057651
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacga-----gactcatcaaatttatatgaaacc 228  Q
    ||||| ||||||||||||||||||||   ||||||||||| |||||||| |||| ||||||||||||| ||     ||| ||| |||||||||||  |||    
T  21057802 aaatgttagcaacacacattttaacacgcacttttcaacacactctctttgattagttaaaattcacatgatttgggacccataaaatttatatgggacc 21057703  T
Q  229 cacatgatttggtgggacccatgtgaa--ttttaaccgattaaagagagtgt 278  Q
    ||||||||||||||||| |||||||||  |||||||| || |||||||||||    
T  21057702 cacatgatttggtgggatccatgtgaattttttaaccaatcaaagagagtgt 21057651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 3048500 - 3048435
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  3048500 ttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagagacggccctg 3048435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 303
Target Start/End: Complemental strand, 4994310 - 4994145
Alignment:
Q  138 gctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatt 237  Q
    |||||||||||||||||||||| | | |||| |||| ||||| |  ||||||||||||||   | ||||| ||  |||||||||||  ||||||||||||    
T  4994310 gctagcaacacacattttaacacacaatttttaacacactcttt--gattggttaaaatttgtatgagacccacaaaatttatatgggacccacatgatt 4994213  T
Q  238 tggtgggacccatgtgaattttaaccgattaaagagagtgtgtt--aaaatatgtgttgttatcattc 303  Q
    ||||||||| |||  ||||||||||| || ||| ||||| ||||  ||||||||||||||||||||||    
T  4994212 tggtgggactcataagaattttaaccaatcaaaaagagtatgttaaaaaatatgtgttgttatcattc 4994145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 156 - 281
Target Start/End: Original strand, 34504377 - 34504502
Alignment:
Q  156 aacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaa 255  Q
    |||| ||| ||||||||| ||||| || |||||||||||||||||| |  ||||| ||||||||||||  ||||||||||||||||| |||||||| |||    
T  34504377 aacatatatttttcaacacactctttttgattggttaaaattcacatggaactcaccaaatttatatgggacccacatgatttggtgtgacccatgcgaa 34504476  T
Q  256 ttttaaccgattaaagagagtgtgtt 281  Q
    |||||||| || ||| | ||||||||    
T  34504477 ttttaaccaatcaaaaaaagtgtgtt 34504502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 37430141 - 37430076
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  37430141 ttgattttatcactggcctcttttcattcccagagccgagcctccgaattctcagggacggccctg 37430076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 185 - 285
Target Start/End: Original strand, 40175923 - 40176023
Alignment:
Q  185 attggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaa 284  Q
    ||||||||||||||||| | ||  || ||||||||||||  |||||||| ||||||||||||||||||||||||||||| ||||||  ||||||||||||    
T  40175923 attggttaaaattcacatgggatccaccaaatttatatgggacccacataatttggtgggacccatgtgaattttaaccaattaaaaggagtgtgttaaa 40176022  T
Q  285 a 285  Q
    |    
T  40176023 a 40176023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 134 - 262
Target Start/End: Original strand, 40694591 - 40694719
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    ||||||||||||||||| |||||||| | | ||| ||||| | ||| || |||||||||||||| ||| | ||| || ||||| |||||   ||||||||    
T  40694591 aaatgctagcaacacacgttttaacacacattttacaacacaatctatttgattggttaaaattaacatgcgacccaccaaatctatataggacccacat 40694690  T
Q  234 gatttggtgggacccatgtgaattttaac 262  Q
    |||||||||||||||||||||||||||||    
T  40694691 gatttggtgggacccatgtgaattttaac 40694719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 42072770 - 42072674
Alignment:
Q  185 attggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt 281  Q
    ||||||||||||| ||| | ||| || ||||||||||||| ||||| ||||||||||||||||||||||||| |||||| || ||||||||||||||    
T  42072770 attggttaaaatttacatgggacccaccaaatttatatgagacccatatgatttggtgggacccatgtgaatgttaaccaatcaaagagagtgtgtt 42072674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 30883450 - 30883512
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggcc 83  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  30883450 ttgattttatcactggcctcttttcatttccagagccgagcctctgaattctcagggacggcc 30883512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 23606613 - 23606546
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctgat 88  Q
    |||||||||||||||| || |||||||| ||||||||||||||||||||||| |||||||||||||||    
T  23606613 ttgattttatcactggtctcttttcattcccagagccgagcctccgaattcttagggacggccctgat 23606546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 170 - 280
Target Start/End: Original strand, 26018476 - 26018584
Alignment:
Q  170 aacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaa 269  Q
    |||| |||||| | |||||||||||||||||  ||||| || ||||||||||||  |||||||| ||||| ||||||||||||||||||||||| || ||    
T  26018476 aacacactctcgttgattggttaaaattcac--gagacccaccaaatttatatgggacccacataatttgatgggacccatgtgaattttaaccaatcaa 26018573  T
Q  270 agagagtgtgt 280  Q
     ||||||||||    
T  26018574 ggagagtgtgt 26018584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 149 - 280
Target Start/End: Complemental strand, 35586549 - 35586419
Alignment:
Q  149 acattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggaccc 248  Q
    ||||| ||||| | ||||||||||| | ||||||  |||| ||||||||||||   ||| || ||||||||||||| || ||||||||||||||||| ||    
T  35586549 acattctaacacacacttttcaacacattctctttaattgattaaaattcacataggacccaccaaatttatatgagactcacatgatttggtggga-cc 35586451  T
Q  249 atgtgaattttaaccgattaaagagagtgtgt 280  Q
     |||||||||||||| || |||||||||||||    
T  35586450 gtgtgaattttaaccaatcaaagagagtgtgt 35586419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 13534671 - 13534609
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggcc 83  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||    
T  13534671 ttgattttatcactggcctcttttcattcccagagccgagcctccgaattttcagggacggcc 13534609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 13624211 - 13624149
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggcc 83  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||    
T  13624211 ttgattttatcactggcctcttttcattcccagagccgagcctccgaattttcagggacggcc 13624149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 20003793 - 20003728
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| |||||||| || ||||||||||||| ||||||||||||||||||||    
T  20003793 ttgattttatcactggcctcttttcattccccgagccgagcctccaaattctcagggacggccctg 20003728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 42600902 - 42600967
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||| ||| ||||||||| |||||||||||||||||||||| |||||||||||||    
T  42600902 ttgattttatcactgacctcttttcattttcagagccgagcctccgaattcttagggacggccctg 42600967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 45475936 - 45476001
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| |||||||| || |||||||||||||||||||||||||| |||||||    
T  45475936 ttgattttatcactggcctcttttcattccccgagccgagcctccgaattctcagggatggccctg 45476001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 134 - 263
Target Start/End: Complemental strand, 27072976 - 27072847
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    |||| ||||||||||| ||||||||| | ||||||||||| | ||| || |||||||||||||| |||   ||| || ||||||||||||  | ||||||    
T  27072976 aaatactagcaacacatattttaacacacacttttcaacacattctttttgattggttaaaatttacattggacccaccaaatttatatgggatccacat 27072877  T
Q  234 gatttggtgggacccatgtgaattttaacc 263  Q
    ||||||||| |||| |  ||||||||||||    
T  27072876 gatttggtgagacctacatgaattttaacc 27072847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 171 - 305
Target Start/End: Complemental strand, 38835124 - 38834990
Alignment:
Q  171 acatactctcttcgattggttaaaattcacacgagactc-atcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaa 269  Q
    |||| |||| || ||||||||||||||||||  ||| || | ||||||||||||  |||| |||||||||||| |||||||||||||||||  | || ||    
T  38835124 acattctctttttgattggttaaaattcacat-agaatctaccaaatttatatgggacccgcatgatttggtgagacccatgtgaattttagtcaatcaa 38835026  T
Q  270 agagagtgtgttaaaatatgtgttgttatcattcct 305  Q
    ||||| |||||| |||| ||||| |||| |||||||    
T  38835025 agagaatgtgttgaaatgtgtgtggttagcattcct 38834990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 23798244 - 23798178
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctga 87  Q
    |||||||||||| || ||| ||||| || ||||||||||||||||||||||| ||||||||||||||    
T  23798244 ttgattttatcattgacctcttttcgttcccagagccgagcctccgaattcttagggacggccctga 23798178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 41879302 - 41879364
Alignment:
Q  24 attttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    |||||||||||  ||| |||||||| |||||||||||||| ||||||||||||||||||||||    
T  41879302 attttatcactaacctcttttcattcccagagccgagccttcgaattctcagggacggccctg 41879364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 10917510 - 10917575
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||||| | |||| ||||||    
T  10917510 ttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttaaggacagccctg 10917575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 212 - 281
Target Start/End: Complemental strand, 13260475 - 13260406
Alignment:
Q  212 caaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt 281  Q
    ||||||||||||  |||||||||| ||||||||||||||||| ||||||||| || ||||| ||||||||    
T  13260475 caaatttatatgggacccacatgagttggtgggacccatgtgcattttaaccaataaaagatagtgtgtt 13260406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 135 - 216
Target Start/End: Complemental strand, 40566616 - 40566535
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaat 216  Q
    |||| |||||||||||||||||||| ||| |||||||||  |||| || |||||||||||||||||| ||| |||| |||||    
T  40566616 aatgttagcaacacacattttaacacatatttttcaacacgctctttttgattggttaaaattcacatgagtctcaccaaat 40566535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 140 - 262
Target Start/End: Original strand, 1806152 - 1806273
Alignment:
Q  140 tagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttg 239  Q
    ||||||||| |||| ||||| | | ||| ||| ||| |||||| ||||||||||| |||| ||| | |||| ||||||||||||   |||||||| ||||    
T  1806152 tagcaacactcattgtaacacacattttacaatataatctctttgattggttaaagttcaaacgcgtctcaccaaatttatatg-gccccacatggtttg 1806250  T
Q  240 gtgggacccatgtgaattttaac 262  Q
    |||||||||| |||| |||||||    
T  1806251 gtgggacccaagtgagttttaac 1806273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 5860725 - 5860671
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcag 75  Q
    |||||||||||| || ||| ||||||||||||||||||||||||| |||||||||    
T  5860725 ttgattttatcattgacctcttttcatttccagagccgagcctccaaattctcag 5860671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 36009982 - 36009916
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcaca 201  Q
    ||||||||||||| ||||||||||| | ||||| ||||| |||||||| | ||||||||||||||||    
T  36009982 aatgctagcaacaaacattttaacacacactttccaacacactctctttggttggttaaaattcaca 36009916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 161 - 285
Target Start/End: Original strand, 21124956 - 21125079
Alignment:
Q  161 atacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaatttta 260  Q
    ||||||||| ||| ||||| || |||||||||||||||| | |  |  |||||||||||||||  | |||||||||||| || ||||||||| |||||||    
T  21124956 atacttttcgacacactctttt-gattggttaaaattcatatggaatccatcaaatttatatgggatccacatgatttgatgagacccatgtaaatttta 21125054  T
Q  261 accgattaaagagagtgtgttaaaa 285  Q
    | | || ||| ||| ||||||||||    
T  21125055 atcaatcaaatagaatgtgttaaaa 21125079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 263
Target Start/End: Original strand, 8402460 - 8402585
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    |||||||||||||||||  ||||||| |  |||||||||| ||||| |  ||||| |||||||||||| | | | || |||||| |||||   |||||||    
T  8402460 aaatgctagcaacacactgtttaacaca--cttttcaacacactcttt--gattgtttaaaattcacatgggtcccaacaaattaatatgggtcccacat 8402555  T
Q  234 gatttggtgggacccatgtgaattttaacc 263  Q
    ||||||||||| |||||| || ||||||||    
T  8402556 gatttggtggggcccatgagagttttaacc 8402585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 302
Target Start/End: Complemental strand, 26018506 - 26018455
Alignment:
Q  251 gtgaattttaaccgattaaagagagtgtgttaaaatatgtgttgttatcatt 302  Q
    ||||||||||||| || || ||||||||||||||||||||||||||| ||||    
T  26018506 gtgaattttaaccaatcaacgagagtgtgttaaaatatgtgttgttagcatt 26018455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 42209424 - 42209483
Alignment:
Q  219 atatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgt 278  Q
    ||||| |||||||||||| |||||||| ||||||||||||||||| || |||||| ||||    
T  42209424 atatggaacccacatgatatggtgggaaccatgtgaattttaaccaatcaaagagtgtgt 42209483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 1806327 - 1806285
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatact 177  Q
    |||| |||||||||||||||||||| |||||||||||||||||    
T  1806327 aatgttagcaacacacattttaacacatacttttcaacatact 1806285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 248
Target Start/End: Original strand, 17893299 - 17893409
Alignment:
Q  138 gctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatt 237  Q
    |||||||||||||||||||||| | | |||| |||| |||||||| |||| ||||||| ||||| |||   ||  |||| ||||||   | |||||||||    
T  17893299 gctagcaacacacattttaacatacattttttaacagactctctttgattagttaaaactcacatgagttccactaaatctatatgggtctcacatgatt 17893398  T
Q  238 tggtgggaccc 248  Q
    |||||||||||    
T  17893399 tggtgggaccc 17893409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 276
Target Start/End: Original strand, 2478494 - 2478538
Alignment:
Q  232 atgatttggtgggacccatgtgaattttaaccgattaaagagagt 276  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||    
T  2478494 atgatttggtgggacccatgtaaattttaaccgataaaaaagagt 2478538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 9814041 - 9814102
Alignment:
Q  140 tagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacg 203  Q
    |||||||||||||||||||| ||| ||| ||||  |||||||| |||| |||||||||||||||    
T  9814041 tagcaacacacattttaacatatattttccaac--actctctttgatttgttaaaattcacacg 9814102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 303
Target Start/End: Original strand, 36914878 - 36915036
Alignment:
Q  144 aacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatc-aaatttatatgaaacccacatgatttggtg 242  Q
    |||| ||||||||||| | | ||||||||||| | ||||  |||| |||||||||||| | || ||| | |||||||||||   | |||||||| || ||    
T  36914878 aacatacattttaacacacatttttcaacatattatctttaattgattaaaattcacatg-gattcaaccaaatttatatggc-ctcacatgatctgctg 36914975  T
Q  243 ggacccatgtgaattttaaccgattaaagagagtgtgttaaaatatgtgttgttatcattc 303  Q
    | |||||| |||||||||||| |||||| ||| | || ||||| ||||||||||| |||||    
T  36914976 gaacccatatgaattttaaccaattaaaaagaatatgataaaaaatgtgttgttaacattc 36915036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 201
Target Start/End: Original strand, 42072640 - 42072705
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcaca 201  Q
    ||||||||||||| |||||||||||| | ||  ||||||| |||||||| |||||||||| |||||||    
T  42072640 aaatgctagcaacgcacattttaacacacac--ttcaacacactctctttgattggttaacattcaca 42072705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 9814135 - 9814072
Alignment:
Q  215 atttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgt 278  Q
    |||||||||||| |||||| |||| ||||||| | |||||||||||||  || |||||||||||    
T  9814135 atttatatgaaatccacattatttagtgggacacgtgtgaattttaacaaatcaaagagagtgt 9814072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 231 - 294
Target Start/End: Complemental strand, 24306329 - 24306266
Alignment:
Q  231 catgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaaatatgtgttg 294  Q
    ||||||||||||| ||| |  ||||||| |||| || |||||||||||||| ||||||||||||    
T  24306329 catgatttggtggaaccgagatgaatttcaaccaataaaagagagtgtgttgaaatatgtgttg 24306266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 173
Target Start/End: Complemental strand, 8402636 - 8402598
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaaca 173  Q
    ||||||||||||||||||||||||| | |||||||||||    
T  8402636 aatgctagcaacacacattttaacacacacttttcaaca 8402598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 204
Target Start/End: Complemental strand, 13772542 - 13772484
Alignment:
Q  146 cacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacga 204  Q
    |||||||||||||| | |||||| |||| | |||||| ||||| |||||||||||||||    
T  13772542 cacacattttaacacaaacttttaaacacattctctttgattgattaaaattcacacga 13772484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 23848244 - 23848307
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattca 199  Q
    |||||||| ||||||||||||||||  | ||||||||||| ||| |||| ||||| ||||||||||    
T  23848244 aaatgctaacaacacacattttaac--acacttttcaacacactatctttgattgattaaaattca 23848307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 216
Target Start/End: Original strand, 38357548 - 38357629
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaat 216  Q
    ||||||||||||||||||| || || | ||||| ||||| |||||||| |||| ||| ||| ||||| ||||| || |||||    
T  38357548 aatgctagcaacacacattctagcacacactttccaacacactctctttgattagttgaaactcacatgagacccaccaaat 38357629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 293
Target Start/End: Original strand, 40566531 - 40566595
Alignment:
Q  231 catgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt--aaaatatgtgtt 293  Q
    |||||||||||| ||| |||||||||||||||| || ||| |||| |||||  ||||||||||||    
T  40566531 catgatttggtgagactcatgtgaattttaaccaatcaaaaagagcgtgttgaaaaatatgtgtt 40566595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 281
Target Start/End: Complemental strand, 38357639 - 38357583
Alignment:
Q  225 aacccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt 281  Q
    |||||||||||||||||||| | ||||||| ||| |||  || ||||||||||||||    
T  38357639 aacccacatgatttggtgggtctcatgtgagtttcaactaatcaaagagagtgtgtt 38357583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 1e-29; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 134 - 263
Target Start/End: Complemental strand, 5706780 - 5706650
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatc-aaatttatatgaaacccaca 232  Q
    ||||| |||||||||||||||||||| ||||||||||||| |||||||| ||||| |||||||| ||| | ||| |||| ||||| |||||| || ||||    
T  5706780 aaatgatagcaacacacattttaacacatacttttcaacacactctctttgattgattaaaatttacatgggacccatcaaaattgatatgagacgcaca 5706681  T
Q  233 tgatttggtgggacccatgtgaattttaacc 263  Q
    ||||||||||||| |||| ||||||||||||    
T  5706680 tgatttggtgggatccatatgaattttaacc 5706650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 21280668 - 21280734
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctga 87  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21280668 ttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccctga 21280734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 13727382 - 13727317
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  13727382 ttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccctg 13727317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 134 - 281
Target Start/End: Original strand, 12731532 - 12731679
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    ||||| |||||||||| ||| ||| | | |||| |||||| | |||||| |||||||||||||||||| ||||| |||||||||||| ||  ||||||||    
T  12731532 aaatgttagcaacacatattctaatacacacttctcaacacattctctttgattggttaaaattcacatgagacccatcaaatttatttgggacccacat 12731631  T
Q  234 gatttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt 281  Q
    |||||||||| | | |||| |||||||||| || ||| ||||||||||    
T  12731632 gatttggtggaagctatgtaaattttaaccaatcaaaaagagtgtgtt 12731679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 27788673 - 27788606
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctgat 88  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||    
T  27788673 ttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagggacggccctgat 27788606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 134 - 263
Target Start/End: Complemental strand, 11651051 - 11650921
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattgg-ttaaaattcacacgagactcatcaaatttatatgaaacccaca 232  Q
    |||||||| ||||| |||||||||||   | ||||||||||| |||||| |||||| |||||||| ||| | ||| || ||||||||||||  |||||||    
T  11651051 aaatgctaacaacatacattttaacacgcatttttcaacataatctctttgattggcttaaaatttacatgggacccaccaaatttatatgggacccaca 11650952  T
Q  233 tgatttggtgggacccatgtgaattttaacc 263  Q
    | ||||||||||| |||||||||||||||||    
T  11650951 taatttggtgggatccatgtgaattttaacc 11650921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 21479618 - 21479683
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||    
T  21479618 ttgattttatcactggcctcttttcatttccagagccgagcctccaaattctcagagacggccctg 21479683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 30832508 - 30832443
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||    
T  30832508 ttgattttatcactggcctcttttcattcccagagccgagccttcgaattctcagggacggccctg 30832443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 207 - 305
Target Start/End: Complemental strand, 3150297 - 3150197
Alignment:
Q  207 ctcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt--aaaatatgtgttgttatcattcc 304  Q
    |||| |||||||||||| || |||||||||||||||||||||||||||||||||||| |||||| |  || ||||  ||||||||||||| || ||||||    
T  3150297 ctcaccaaatttatatggaatccacatgatttggtgggacccatgtgaattttaaccaattaaaaattgtctgttgaaaaatatgtgttgctagcattcc 3150198  T
Q  305 t 305  Q
    |    
T  3150197 t 3150197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 27314162 - 27314097
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| |||||||| |||||| |||||||||||||| |||||||||||||||    
T  27314162 ttgattttatcactggcctcttttcattcccagagtcgagcctccgaattttcagggacggccctg 27314097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 165 - 262
Target Start/End: Complemental strand, 24783996 - 24783899
Alignment:
Q  165 ttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaac 262  Q
    |||| |||| ||| |||| ||||| |||||||| ||| ||||  ||||||||||||||| || |||||||||||||||||| |||| |||||||||||    
T  24783996 tttttaacacactatctttgattgattaaaatttacatgagatccatcaaatttatatggaatccacatgatttggtgggatccatatgaattttaac 24783899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 278
Target Start/End: Complemental strand, 4483527 - 4483383
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    |||| |||||||||||||||||||||   |||||||||||  ||||||| |||  ||||||| ||||    | | || ||||||||||||   |||||||    
T  4483527 aaatactagcaacacacattttaacacgcacttttcaacacgctctctttgatccgttaaaactcacgtaggtcacaccaaatttatatgggtcccacat 4483428  T
Q  234 gatttggtgggacccatgtgaattttaaccgattaaagagagtgt 278  Q
    ||||||||||||||| | | |||||||||| || |||||||||||    
T  4483427 gatttggtgggacccgtattaattttaaccaatcaaagagagtgt 4483383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 20711703 - 20711635
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctgatg 89  Q
    |||||||||| |||| ||| |||||||| ||||| ||||||||||||||||||||||||| ||||||||    
T  20711703 ttgattttatgactgacctcttttcattcccagaaccgagcctccgaattctcagggacgtccctgatg 20711635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 33774241 - 33774305
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccct 85  Q
    |||||||||| |||||||| ||||||||| |||||||||||||||||||||||| ||| ||||||    
T  33774241 ttgattttattactggcctcttttcattttcagagccgagcctccgaattctcaaggatggccct 33774305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 292
Target Start/End: Complemental strand, 1473684 - 1473618
Alignment:
Q  226 acccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaaatatgtgt 292  Q
    |||||||||||||||||| ||||||||||||||||||| || ||||| |||||||| ||| ||||||    
T  1473684 acccacatgatttggtggaacccatgtgaattttaaccaatcaaagatagtgtgttgaaaaatgtgt 1473618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 4033144 - 4033075
Alignment:
Q  143 caacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatc 212  Q
    ||||||||||||||||| | ||||||||| | ||| |||| |||||||||||||||||||||| ||||||    
T  4033144 caacacacattttaacacacacttttcaatacactatctttgattggttaaaattcacacgagtctcatc 4033075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 17354077 - 17354142
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||| ||| |||||||| | |||| |||||||||||||||| |||||||||||||    
T  17354077 ttgattttatcactgacctcttttcattccaagagtcgagcctccgaattcttagggacggccctg 17354142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 17390058 - 17389989
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacg 203  Q
    ||||||||||||||||||||||||||   | |||||||||  ||||||| ||||||||||||||||||||    
T  17390058 aaatgctagcaacacacattttaacacgcaattttcaacactctctctttgattggttaaaattcacacg 17389989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 24710979 - 24710914
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||  ||| |||||||| || |||| |||||||||||||||||||||||||||||    
T  24710979 ttgattttatcactaacctcttttcattccctgagctgagcctccgaattctcagggacggccctg 24710914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 6643329 - 6643440
Alignment:
Q  170 aacatactctcttcgattggttaaaattcacac-gagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgatta 268  Q
    |||| |||||| | ||||||||||||||||||  | ||| || ||||||||||||  |||||||||||||||||||||| || |||||||||||| || |    
T  6643329 aacacactctcattgattggttaaaattcacatagtgac-caccaaatttatatgggacccacatgatttggtgggacctatatgaattttaaccaatca 6643427  T
Q  269 aagagagtgtgtt 281  Q
    ||||  |||||||    
T  6643428 aagaccgtgtgtt 6643440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 206
Target Start/End: Complemental strand, 17600757 - 17600694
Alignment:
Q  143 caacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgaga 206  Q
    ||||||||||||||||||| | ||||||||||| |||||| |||||||||||| ||||| ||||    
T  17600757 caacacacattttaacaaacatttttcaacatattctctttgattggttaaaactcacatgaga 17600694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 201
Target Start/End: Original strand, 1473594 - 1473660
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcaca 201  Q
    ||||||||||||||||||||||| | | | ||||||||| ||| |||| ||||||||||||||||||    
T  1473594 aatgctagcaacacacattttaatacacatttttcaacacactatctttgattggttaaaattcaca 1473660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 28075909 - 28075976
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctgatg 89  Q
    |||||||| |||||||||| |||||||| |||||||||||||||| |||||| | ||||| ||||||||    
T  28075909 ttgattttttcactggcctcttttcattcccagagccgagcctccaaattctta-ggacgaccctgatg 28075976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 9645077 - 9645011
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcaca 201  Q
    |||||||||||| |||||| ||||| ||||||| ||||| | ||| || ||||||||||||||||||    
T  9645077 aatgctagcaacccacattctaacacatactttccaacacaatctttttgattggttaaaattcaca 9645011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 9651094 - 9651028
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcaca 201  Q
    |||||||||||| |||||| ||||| ||||||| ||||| | ||| || ||||||||||||||||||    
T  9651094 aatgctagcaacccacattctaacacatactttccaacacaatctttttgattggttaaaattcaca 9651028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 33182312 - 33182274
Alignment:
Q  235 atttggtgggacccatgtgaattttaaccgattaaagag 273  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  33182312 atttggtgggacccatgtgaattttaaccgataaaagag 33182274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 4494375 - 4494477
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatg 234  Q
    |||||||||| |||||||| ||||| ||  ||||||||| ||| |||| |||||||||||||||||    ||  || ||||||||||||| || ||||||    
T  4494375 aatgctagcagcacacattctaacacat--ttttcaacacactttctttgattggttaaaattcacgtctgatccaccaaatttatatgagactcacatg 4494472  T
Q  235 atttg 239  Q
    |||||    
T  4494473 atttg 4494477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 6643361 - 6643316
Alignment:
Q  249 atgtgaattttaaccgattaaagagagtgtgttaaaatatgtgttg 294  Q
    ||||||||||||||| || || ||||||||||||||||||||||||    
T  6643361 atgtgaattttaaccaatcaatgagagtgtgttaaaatatgtgttg 6643316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 24110041 - 24110106
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattca 199  Q
    |||||||||||||||| ||| ||| | | | ||||||||| |||||||| ||||||||||||||||    
T  24110041 aaatgctagcaacacatattctaaaatacatttttcaacacactctctttgattggttaaaattca 24110106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 263
Target Start/End: Complemental strand, 28865479 - 28865442
Alignment:
Q  226 acccacatgatttggtgggacccatgtgaattttaacc 263  Q
    |||||||||| |||||||||||||||||||||||||||    
T  28865479 acccacatgaattggtgggacccatgtgaattttaacc 28865442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 4483346 - 4483407
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaatt 197  Q
    |||| ||||||||| ||||||||||| | ||||||||||  |||||||| ||||||||||||||    
T  4483346 aaatactagcaacatacattttaacatacacttttcaac--actctctttgattggttaaaatt 4483407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 263
Target Start/End: Complemental strand, 31054738 - 31054686
Alignment:
Q  211 tcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaacc 263  Q
    |||||||||||||| |||||||| |||| ||| ||| ||||||||||||||||    
T  31054738 tcaaatttatatgagacccacataatttagtgtgacgcatgtgaattttaacc 31054686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 134 - 201
Target Start/End: Original strand, 479781 - 479848
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcaca 201  Q
    |||||||||||||||| ||||||| ||| | ||||||| | ||| | || ||||||||||||||||||    
T  479781 aaatgctagcaacacaaattttaataaacatttttcaaaacactttatttgattggttaaaattcaca 479848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 1155830 - 1155767
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccc 84  Q
    ||||||||||||||| ||| |||||||| | ||| |||||||||| |||| | |||||||||||    
T  1155830 ttgattttatcactgacctcttttcattcctagaaccgagcctccaaatttttagggacggccc 1155767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 138 - 201
Target Start/End: Complemental strand, 4787874 - 4787811
Alignment:
Q  138 gctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcaca 201  Q
    |||||||||||||||||||||| | | |||| ||||  ||||||| |||||||||||| |||||    
T  4787874 gctagcaacacacattttaacatacattttttaacagtctctctttgattggttaaaactcaca 4787811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 10730022 - 10729959
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattca 199  Q
    ||||||||| |||||||||||||||  | |||||||||||  ||||||| ||| ||||||||||||    
T  10730022 aaatgctagaaacacacattttaac--acacttttcaacacgctctctttgatcggttaaaattca 10729959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 19737676 - 19737611
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctga 87  Q
    ||||||||||||||||||| |||||| | | |||||||| ||| | |||||||||||||| ||||||    
T  19737676 ttgattttatcactggcctcttttca-tcctagagccgaaccttcaaattctcagggacgaccctga 19737611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 258
Target Start/End: Original strand, 26328217 - 26328263
Alignment:
Q  212 caaatttatatgaaacccacatgatttggtgggacccatgtgaattt 258  Q
    ||||||||||||  |||||||||||| ||||| ||||||||||||||    
T  26328217 caaatttatatgggacccacatgattcggtggaacccatgtgaattt 26328263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 201
Target Start/End: Complemental strand, 34093944 - 34093906
Alignment:
Q  163 acttttcaacatactctcttcgattggttaaaattcaca 201  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  34093944 acttttcaacataatctctttgattggttaaaattcaca 34093906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 235208 - 235151
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcaggga 78  Q
    |||||||||||||||| || ||||||||  || |||||| |||||||||||| |||||    
T  235208 ttgattttatcactggtctcttttcattctcatagccgaacctccgaattcttaggga 235151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 196
Target Start/End: Complemental strand, 31989294 - 31989233
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaat 196  Q
    |||||||| || |||||||||||| || ||||||||| ||| |||||| |||| ||||||||    
T  31989294 aatgctagtaaaacacattttaaccaacacttttcaatatattctctttgatttgttaaaat 31989233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 261
Target Start/End: Complemental strand, 3625183 - 3625151
Alignment:
Q  229 cacatgatttggtgggacccatgtgaattttaa 261  Q
    |||||||||||||||||| ||||||||||||||    
T  3625183 cacatgatttggtgggactcatgtgaattttaa 3625151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 302
Target Start/End: Complemental strand, 9358300 - 9358210
Alignment:
Q  213 aaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt--aaaatatgtgttgttatcatt 302  Q
    ||||||||||||| ||||||| |||| ||||| | |||||||||||||||| || ||| | | | ||||  |||||||||||||||| ||||    
T  9358300 aaatttatatgaa-cccacataatttagtgggtctcatgtgaattttaaccaatcaaatataatatgttaaaaaatatgtgttgttagcatt 9358210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 19711616 - 19711660
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactc 178  Q
    ||||| |||||||||||||||||||| ||| ||||||| ||||||    
T  19711616 aaatggtagcaacacacattttaacacatatttttcaatatactc 19711660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 276
Target Start/End: Original strand, 24110145 - 24110177
Alignment:
Q  244 gacccatgtgaattttaaccgattaaagagagt 276  Q
    |||||||||||||||||||| ||||||||||||    
T  24110145 gacccatgtgaattttaaccaattaaagagagt 24110177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 31946978 - 31946914
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattca 199  Q
    ||||||||||||||||||| ||||| | ||||||||||| || || ||  || ||||||||||||    
T  31946978 aatgctagcaacacacattctaacacacacttttcaacacacacttttttatcggttaaaattca 31946914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 4e-29; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 134 - 279
Target Start/End: Original strand, 37810124 - 37810269
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    ||||| |||||| | ||||||||||  ||||||||||||| |||||||| ||||||||| |||||||| | ||| || ||||||||||||  |||||  |    
T  37810124 aaatggtagcaaaatacattttaactcatacttttcaacacactctctttgattggttataattcacatgggacccaccaaatttatatgggacccatct 37810223  T
Q  234 gatttggtgggacccatgtgaattttaaccgattaaagagagtgtg 279  Q
     ||||||||||||||||||||||||||||| || |||| |||||||    
T  37810224 aatttggtgggacccatgtgaattttaaccaatcaaagtgagtgtg 37810269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 4506013 - 4506079
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctga 87  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  4506013 ttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggccctga 4506079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 165 - 281
Target Start/End: Original strand, 25666807 - 25666923
Alignment:
Q  165 ttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccg 264  Q
    ||||||||| ||||| || ||||| |||||||||||| ||||| || |||||||||||| |||| |||||||||||||||| ||||||| ||||||||      
T  25666807 ttttcaacacactctatttgattgattaaaattcacatgagacccaccaaatttatatggaacctacatgatttggtgggatccatgtggattttaacac 25666906  T
Q  265 attaaagagagtgtgtt 281  Q
    || ||||||||||||||    
T  25666907 atcaaagagagtgtgtt 25666923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 163 - 303
Target Start/End: Complemental strand, 42251295 - 42251153
Alignment:
Q  163 acttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaac 262  Q
    ||||||||||| |||||||| ||||| |||||||||||| | ||  || |||||||||||    ||||||| ||||||||||||||||| ||||||||||    
T  42251295 acttttcaacacactctctttgattgattaaaattcacatgggatccaccaaatttatataggtcccacataatttggtgggacccatgcgaattttaac 42251196  T
Q  263 cgattaaagagagtgtgt--taaaatatgtgttgttatcattc 303  Q
    |||| |||||||||||||   ||||| |||||||||| |||||    
T  42251195 cgatcaaagagagtgtgtcgaaaaatgtgtgttgttagcattc 42251153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 147 - 294
Target Start/End: Original strand, 1469730 - 1469879
Alignment:
Q  147 acacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggac 246  Q
    ||||||||||||| ||| ||||||||| ||||| ||  ||||||||||||||||| |  |  || ||||||||||||  ||||||||||||| ||||||     
T  1469730 acacattttaacacatatttttcaacacactctatttaattggttaaaattcacatggaatccaccaaatttatatgggacccacatgattttgtgggat 1469829  T
Q  247 ccatgtgaattttaaccgat--taaagagagtgtgttaaaatatgtgttg 294  Q
    ||||||||||||||||| ||   ||| || ||||||||||||||||||||    
T  1469830 ccatgtgaattttaaccaataaaaaaaagtgtgtgttaaaatatgtgttg 1469879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 6965124 - 6965186
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggcc 83  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6965124 ttgattttatcactggcctcttttcatttccagagccgagcctccgaattctcagggacggcc 6965186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 12337430 - 12337365
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  12337430 ttgattttatcactggcctcttttcatttccagagccgagccttcgaattctcagggacggccctg 12337365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 134 - 281
Target Start/End: Complemental strand, 16209536 - 16209389
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    |||||||||||||||| ||| ||||| | ||||||||||  | |||||| |||  ||||||||||| | || || || ||||||||||||  ||| |||     
T  16209536 aaatgctagcaacacatattctaacatacacttttcaacgcattctctttgatcagttaaaattcaaatgaaacccaccaaatttatatgggaccgacaa 16209437  T
Q  234 gatttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt 281  Q
     ||||||||| || |||||||||||||||| |||||||||||||||||    
T  16209436 aatttggtggaactcatgtgaattttaaccaattaaagagagtgtgtt 16209389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 134 - 281
Target Start/End: Original strand, 33069145 - 33069292
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    ||||| |||||||||||||| || || | ||||||||||| ||| |||| ||| ||||||||||||||  |||| || ||| ||||||||  ||||||||    
T  33069145 aaatgttagcaacacacattctatcacacacttttcaacacactttctttgatcggttaaaattcacattagacccaccaagtttatatgggacccacat 33069244  T
Q  234 gatttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt 281  Q
     |||| |||||||||| |||| |||||||| || ||| ||||||||||    
T  33069245 aatttagtgggacccaagtgatttttaaccaatcaaaaagagtgtgtt 33069292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 175 - 293
Target Start/End: Complemental strand, 18719850 - 18719733
Alignment:
Q  175 actctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagaga 274  Q
    |||||||| ||||||||||| || ||| ||||| |||||||||||||||  |||||||||||||||||| || | |||||||||||||| || ||| |||    
T  18719850 actctctttgattggttaaattt-acatgagacccatcaaatttatatgggacccacatgatttggtggaactcgtgtgaattttaaccaatcaaaaaga 18719752  T
Q  275 gtgtgttaaaatatgtgtt 293  Q
    ||||||| ||| |||||||    
T  18719751 gtgtgttgaaaaatgtgtt 18719733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 8907061 - 8906996
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||    
T  8907061 ttgattttatcactggcctcttttcattttcagagccgagcctccgaattctcaggaacggccctg 8906996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 27506724 - 27506657
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctgat 88  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||||| |||||||||||||||    
T  27506724 ttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttagggacggccctgat 27506657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 186 - 281
Target Start/End: Original strand, 42094233 - 42094327
Alignment:
Q  186 ttggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt 281  Q
    |||||||||||||||| | ||| || ||||||||||||  |||||||||||||||||||| ||||||||||||||||| || |||||| |||||||    
T  42094233 ttggttaaaattcacatgggacccaccaaatttatatgggacccacatgatttggtggga-ccatgtgaattttaaccaatcaaagagtgtgtgtt 42094327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 169 - 292
Target Start/End: Complemental strand, 44247664 - 44247541
Alignment:
Q  169 caacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgatta 268  Q
    ||||| |||||||| |||||||||||||||||| | ||  |||||||||| ||||  |||||||| ||||||||| |||||||||||||| |||| || |    
T  44247664 caacacactctctttgattggttaaaattcacatgggatccatcaaatttgtatgggacccacataatttggtggaacccatgtgaatttcaaccaatca 44247565  T
Q  269 aagagagtgtgttaaaatatgtgt 292  Q
    |||| ||| |||| ||| ||||||    
T  44247564 aagatagtttgttgaaaaatgtgt 44247541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 176 - 274
Target Start/End: Original strand, 3466407 - 3466505
Alignment:
Q  176 ctctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagaga 274  Q
    ||||||| |||||||||||||||||| ||||| || |||||| |||||  ||||||| ||||| |||| ||||||||||||||||||| || |||||||    
T  3466407 ctctctttgattggttaaaattcacatgagacccaccaaattcatatgggacccacacgatttagtggaacccatgtgaattttaaccaatcaaagaga 3466505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 137 - 259
Target Start/End: Original strand, 15194516 - 15194638
Alignment:
Q  137 tgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgat 236  Q
    ||||||||||||| ||||||||| | |||||||| || ||||| || |||||||||||| ||||| | | | || ||||| ||||||  ||| |||||||    
T  15194516 tgctagcaacacaaattttaacatacacttttcagcacactctttttgattggttaaaagtcacatgggtcgcaccaaatatatatgggaccgacatgat 15194615  T
Q  237 ttggtgggacccatgtgaatttt 259  Q
    |||||||||| ||||||||||||    
T  15194616 ttggtgggacacatgtgaatttt 15194638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 1396682 - 1396617
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||| |||||||    
T  1396682 ttgattttatcactggcctcttttcatttccagagtcgagcctccgaattctcaaggaaggccctg 1396617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 40636256 - 40636317
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggc 82  Q
    ||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||    
T  40636256 ttgattttatcactggcctcttttcattcccagagctgagcctccgaattctcagggacggc 40636317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 134 - 262
Target Start/End: Complemental strand, 9430298 - 9430170
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    ||||||||  |||||||||| ||||| | ||||||||||||| ||| || |||||||||||||||||| ||  | |||||||||| ||||  ||||||||    
T  9430298 aaatgctaataacacacattctaacacacacttttcaacatattctatttgattggttaaaattcacatgaaccccatcaaatttgtatgggacccacat 9430199  T
Q  234 gatttggtgggacccatgtgaattttaac 262  Q
    |||||||| ||| | || | |||||||||    
T  9430198 gatttggtaggatctatataaattttaac 9430170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 24410558 - 24410625
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctgat 88  Q
    ||||||||||||||||||| |||||||| ||| | ||||||||||||||||| |||||||||||||||    
T  24410558 ttgattttatcactggcctcttttcattcccaaaaccgagcctccgaattcttagggacggccctgat 24410625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 134 - 281
Target Start/End: Complemental strand, 35715134 - 35714988
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    |||||| ||||||||||||||||| | | ||||||||| | |||||||| |||||||||||||| |||   | | ||||||| |||||||  ||||||||    
T  35715134 aaatgccagcaacacacattttaagacacacttttcaatacactctctttgattggttaaaatttacataggtcccatcaaagttatatggtacccacat 35715035  T
Q  234 gatttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt 281  Q
    |||||| | ||  |||||| |||||||||| |  ||||||||||||||    
T  35715034 gatttgatagg-gccatgtaaattttaaccaaacaaagagagtgtgtt 35714988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 294
Target Start/End: Complemental strand, 42094362 - 42094208
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat- 233  Q
    ||||||||||||||||||||||||| | ||||||||||| || ||||| |||||||||||||||||| | | | || |||| | || ||   |||| ||     
T  42094362 aatgctagcaacacacattttaacacacacttttcaacacacactctttgattggttaaaattcacatg-gtcccaccaaa-tcatgtgggtcccatata 42094265  T
Q  234 gatttggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaaatatgtgttg 294  Q
     |||||||||| ||||||||||||||||||    ||||||||||||||||||| |||||||    
T  42094264 aatttggtgggtcccatgtgaattttaacc----aaagagagtgtgttaaaatgtgtgttg 42094208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 163 - 305
Target Start/End: Original strand, 4237257 - 4237399
Alignment:
Q  163 acttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaac 262  Q
    ||||| ||||||  ||| || |||||||||||||| ||| | ||  || ||||||| ||||  |||||||||||||||||| ||||||||||||||||||    
T  4237257 actttccaacattttctttttgattggttaaaatttacatgggatccaccaaatttgtatgggacccacatgatttggtggtacccatgtgaattttaac 4237356  T
Q  263 cgattaaagagagtgtgttaaaatatgtgttgttatcattcct 305  Q
      || ||| | ||||||||||||| | ||||| || |||||||    
T  4237357 taatcaaaaaaagtgtgttaaaatgtatgttgctaacattcct 4237399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 34694093 - 34694155
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggcc 83  Q
    ||||||||||||| ||||| |||||||||||||| |||| |||||||||||||||||||||||    
T  34694093 ttgattttatcacgggcctcttttcatttccagatccgaacctccgaattctcagggacggcc 34694155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 34716505 - 34716567
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggcc 83  Q
    ||||||||||||| ||||| |||||||||||||| |||| |||||||||||||||||||||||    
T  34716505 ttgattttatcacgggcctcttttcatttccagatccgaacctccgaattctcagggacggcc 34716567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 3953123 - 3953188
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||| ||| |||||||||||| |||||||||||| |||||||||||||| |||||    
T  3953123 ttgattttatcactgacctcttttcatttccaaagccgagcctccaaattctcagggacgaccctg 3953188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 292
Target Start/End: Complemental strand, 42029493 - 42029345
Alignment:
Q  144 aacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgg 243  Q
    ||||| |||| ||||| | ||||||||||| ||| | ||  ||||||||||||||||| ||||| || ||||||||||||    || ||||||||||| |    
T  42029493 aacacgcattctaacacacacttttcaacacacttttttttattggttaaaattcacatgagacccaccaaatttatatggggtccgcatgatttggtag 42029394  T
Q  244 gacccatgtgaattttaaccgattaaagagagtgtgttaaaatatgtgt 292  Q
    ||||||| |||||||||||  || ||| | |||||||| ||| ||||||    
T  42029393 gacccatatgaattttaacaaatcaaatacagtgtgttgaaaaatgtgt 42029345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 29939846 - 29939779
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctgat 88  Q
    ||||||||||||||| ||| |||| ||| |||||||||||||| ||||||||||||||||| ||||||    
T  29939846 ttgattttatcactgacctctttttattcccagagccgagccttcgaattctcagggacggtcctgat 29939779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 3155339 - 3155401
Alignment:
Q  24 attttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    |||||||||||| ||| |||||||||  | |||||||||||||||||||||||||||||||||    
T  3155339 attttatcactgacctcttttcatttttaaagccgagcctccgaattctcagggacggccctg 3155401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 3466547 - 3466481
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcaca 201  Q
    ||||||||||||||||||||||||| | |||||  |||||| |||||| ||||||||||||||||||    
T  3466547 aatgctagcaacacacattttaacacacactttcaaacatagtctctttgattggttaaaattcaca 3466481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 134 - 292
Target Start/End: Complemental strand, 1930826 - 1930673
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    ||||||||||||||||||||    | |||||||||||||| ||| | || |||||| ||||| | |||||||||  | ||||||||||||  ||||||||    
T  1930826 aaatgctagcaacacacatt----ccaatacttttcaacacactttttt-gattggctaaaagttacacgagacctaccaaatttatatgggacccacat 1930732  T
Q  234 gatttggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaaatatgtgt 292  Q
     ||||| ||| ||  ||||||||||||||| || ||| ||||||| || ||| ||||||    
T  1930731 aatttgatggaacatatgtgaattttaaccaatcaaaaagagtgtcttgaaaaatgtgt 1930673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 163 - 303
Target Start/End: Complemental strand, 33171731 - 33171590
Alignment:
Q  163 acttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaac 262  Q
    ||||||||||| |||||||| ||||||||||| |||||| | | | || ||||||||||     |  ||||||||||||||||||||| ||||||||||     
T  33171731 acttttcaacacactctctttgattggttaaatttcacatgggtcccaccaaatttatacaggtcttacatgatttggtgggacccatatgaattttaaa 33171632  T
Q  263 cgattaaagagagtgtgtt-aaaatatgtgttgttatcattc 303  Q
    | || ||||| |||||||| ||||| | |||||||| |||||    
T  33171631 caatcaaagaaagtgtgttgaaaatgtatgttgttagcattc 33171590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 134 - 261
Target Start/End: Original strand, 36283464 - 36283587
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    |||||||||||||| |||||||||||  |||||||||||| | |||||| ||| | |||||||| ||  | |  ||||||||||||||||   |||||||    
T  36283464 aaatgctagcaacatacattttaaca--tacttttcaacacattctctttgatggattaaaatttac--gtgtttcatcaaatttatatgggtcccacat 36283559  T
Q  234 gatttggtgggacccatgtgaattttaa 261  Q
    |||||||| ||||| ||| |||||||||    
T  36283560 gatttggtaggacctatgcgaattttaa 36283587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 5952701 - 5952642
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacg 80  Q
    |||||||||||| |||||| |||||||| | |||||||| ||||||||||||||||||||    
T  5952701 ttgattttatcattggcctcttttcattccgagagccgaacctccgaattctcagggacg 5952642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 7162905 - 7162968
Alignment:
Q  24 attttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctga 87  Q
    |||||||||||||||| |||||||| || |||| |||||| |||| ||||||||||||||||||    
T  7162905 attttatcactggcctcttttcattccccgagctgagccttcgaaatctcagggacggccctga 7162968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 10762547 - 10762488
Alignment:
Q  24 attttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggcc 83  Q
    |||||||||||||||| |||||||| ||||||| |||||||| |||||| ||||||||||    
T  10762547 attttatcactggcctcttttcattcccagagctgagcctccaaattcttagggacggcc 10762488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 205
Target Start/End: Original strand, 18719712 - 18719780
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgag 205  Q
    ||||||||||||||||||| ||||| ||  ||||||||| ||||| || ||||||||||||||||||||||    
T  18719712 aatgctagcaacacacattctaacacat--ttttcaacacactctttttgattggttaaaattcacacgag 18719780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 261
Target Start/End: Original strand, 41496037 - 41496164
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacat 233  Q
    ||||| || ||||| | ||||||||| | ||||||||| | ||| |||| ||||||||||||||||||  | |   | |||||||||||  ||||||| |    
T  41496037 aaatggtaacaacatatattttaacacacacttttcaatacactatctttgattggttaaaattcacataaaatctaccaaatttatatagaacccactt 41496136  T
Q  234 gatttggtgggacccatgtgaattttaa 261  Q
    ||||| ||| ||||||||||||||||||    
T  41496137 gatttagtgtgacccatgtgaattttaa 41496164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 26716248 - 26716313
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||| ||| |||||||| ||| |||||||||  |||||||| |||||||||||||    
T  26716248 ttgattttatcactgacctcttttcattcccaaagccgagccaacgaattcttagggacggccctg 26716313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 256
Target Start/End: Original strand, 29160848 - 29160941
Alignment:
Q  163 acttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaat 256  Q
    ||||||||||| ||  ||||  |||| ||||||| |||| ||||||||  |||||||||||| |||||||| |||||||||| ||||| |||||    
T  29160848 acttttcaacacaccatctttaattgattaaaatccacatgagactcactaaatttatatgagacccacataatttggtggggcccatatgaat 29160941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 242
Target Start/End: Original strand, 12779481 - 12779587
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatg 234  Q
    |||||||||||||||| || ||||| | | ||||||||| | ||| || |||||||||||||||||| | ||  || |||||| |||||  |||||||||    
T  12779481 aatgctagcaacacaccttctaacatacatttttcaacacattctttt-gattggttaaaattcacatgggatccaccaaattcatatgtgacccacatg 12779579  T
Q  235 atttggtg 242  Q
    ||||||||    
T  12779580 atttggtg 12779587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 201
Target Start/End: Complemental strand, 25666959 - 25666892
Alignment:
Q  134 aaatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcaca 201  Q
    |||||||||||||||||||||||||| | | ||||||||| |||||||| |||  |||||||| ||||    
T  25666959 aaatgctagcaacacacattttaacatacaattttcaacacactctctttgatgtgttaaaatccaca 25666892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 8327736 - 8327802
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctga 87  Q
    |||||||||||||||  || |||||||||||||| | ||||||||||||| | |||||||| |||||    
T  8327736 ttgattttatcactgatctcttttcatttccagaactgagcctccgaatttttagggacggtcctga 8327802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 281
Target Start/End: Original strand, 33171678 - 33171724
Alignment:
Q  235 atttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt 281  Q
    ||||||||||||||||||||| ||||||| || ||||||||||||||    
T  33171678 atttggtgggacccatgtgaaatttaaccaatcaaagagagtgtgtt 33171724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 9046148 - 9046213
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| |||| ||| ||||||| |||||  ||||||||  ||||||||||||    
T  9046148 ttgattttatcactggcctcttttaattcccagagctgagccaacgaattctttgggacggccctg 9046213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 296
Target Start/End: Complemental strand, 44487216 - 44487152
Alignment:
Q  232 atgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaaatatgtgttgtt 296  Q
    ||||||||||| ||| |||||||||||||||| || ||||| |||  |||||||| |||||||||    
T  44487216 atgatttggtgagactcatgtgaattttaaccaatcaaagatagtaagttaaaatgtgtgttgtt 44487152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 282
Target Start/End: Complemental strand, 17383820 - 17383773
Alignment:
Q  235 atttggtgggacccatgtgaattttaaccgattaaagagagtgtgtta 282  Q
    |||||||||||||||| ||| |||||||| || |||||||||||||||    
T  17383820 atttggtgggacccatatgacttttaaccaataaaagagagtgtgtta 17383773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 200
Target Start/End: Original strand, 23001439 - 23001474
Alignment:
Q  165 ttttcaacatactctcttcgattggttaaaattcac 200  Q
    |||||||||||||||||| |||||||||||||||||    
T  23001439 ttttcaacatactctctttgattggttaaaattcac 23001474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 305
Target Start/End: Complemental strand, 23080454 - 23080399
Alignment:
Q  250 tgtgaattttaaccgattaaagagagtgtgttaaaatatgtgttgttatcattcct 305  Q
    |||||||||||||| || ||| | |||||||||| ||||||||||||| |||||||    
T  23080454 tgtgaattttaaccaatcaaataaagtgtgttaatatatgtgttgttaacattcct 23080399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 272
Target Start/End: Complemental strand, 6979037 - 6978991
Alignment:
Q  226 acccacatgatttggtgggacccatgtgaattttaaccgattaaaga 272  Q
    |||||||||||||| | |||| |||||||||||||||| ||||||||    
T  6979037 acccacatgatttgataggactcatgtgaattttaaccaattaaaga 6978991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 281
Target Start/End: Complemental strand, 37810206 - 37810160
Alignment:
Q  235 atttggtgggacccatgtgaattttaaccgattaaagagagtgtgtt 281  Q
    |||||||||| |||||||||||| ||||| || ||||||||||||||    
T  37810206 atttggtgggtcccatgtgaattataaccaatcaaagagagtgtgtt 37810160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 293
Target Start/End: Complemental strand, 1469787 - 1469739
Alignment:
Q  247 ccatgtgaattttaaccgattaaagagagtgtgtt--aaaatatgtgtt 293  Q
    ||||||||||||||||| |||||| ||||||||||  ||||||||||||    
T  1469787 ccatgtgaattttaaccaattaaatagagtgtgttgaaaaatatgtgtt 1469739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 12703456 - 12703517
Alignment:
Q  140 tagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcaca 201  Q
    |||||||||||||||||||| | | ||||||| | ||| |||| |||||||||| |||||||    
T  12703456 tagcaacacacattttaacacacatttttcaatacactttctttgattggttaatattcaca 12703517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 30841073 - 30841012
Alignment:
Q  231 catgatttggtgggacccatgtgaattttaaccgattaaagagagtgtgttaaaatatgtgt 292  Q
    ||||||||||| |||||||| |||||||||||| || ||| ||||| ||||| || ||||||    
T  30841073 catgatttggtaggacccatatgaattttaaccaatcaaaaagagtatgttagaaaatgtgt 30841012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 278
Target Start/End: Original strand, 2683446 - 2683498
Alignment:
Q  226 acccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgt 278  Q
    |||||||||||||||||| |||||| | |||||||||| || ||| |||||||    
T  2683446 acccacatgatttggtggaacccatataaattttaaccaatcaaaaagagtgt 2683498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 12779739 - 12779775
Alignment:
Q  245 acccatgtgaattttaaccgattaaagagagtgtgtt 281  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  12779739 acccatgtgaattttaaccaattaaaaagagtgtgtt 12779775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 1462 - 1527
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  1462 ttgattttatcactgacctcttttcattcccagagccgagcctccgaattctcagggacggccctg 1527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 106658 - 106723
Alignment:
Q  21 ttgattttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    ||||||||||||||||||| |||||||| |||||||||||||||| |||||| |||||||||||||    
T  106658 ttgattttatcactggcctcttttcattcccagagccgagcctccaaattcttagggacggccctg 106723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 183182 - 183244
Alignment:
Q  24 attttatcactggccttttttcatttccagagccgagcctccgaattctcagggacggccctg 86  Q
    |||||||||||||||| |||||||| ||||||||||||||| ||||| |||||||||||||||    
T  183182 attttatcactggcctcttttcattcccagagccgagcctctgaattttcagggacggccctg 183244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 179 - 292
Target Start/End: Original strand, 136344 - 136457
Alignment:
Q  179 tcttcgattggttaaaattcacacgagactcatcaaatttatatgaaacccacatgatttggtgggacccatgtgaattttaaccgattaaagagagtgt 278  Q
    |||| |||||||||||||||| | ||| | |||||||||||||||   | ||||||||||| |||||| ||||||| |||||||| || ||| |||||||    
T  136344 tctttgattggttaaaattcatatgagtcccatcaaatttatatgggtcacacatgatttgatgggacacatgtgagttttaaccaatcaaaaagagtgt 136443  T
Q  279 gttaaaatatgtgt 292  Q
    ||| ||| ||||||    
T  136444 gttgaaaaatgtgt 136457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 136481 - 136415
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcaca 201  Q
    ||||||||||| ||||||||||||| | | ||||||||| ||||| || |||||||||||| |||||    
T  136481 aatgctagcaatacacattttaacacacatttttcaacacactctttttgattggttaaaactcaca 136415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0620 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0620
Description:

Target: scaffold0620; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 201
Target Start/End: Complemental strand, 9278 - 9240
Alignment:
Q  163 acttttcaacatactctcttcgattggttaaaattcaca 201  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  9278 acttttcaacataatctctttgattggttaaaattcaca 9240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 201117 - 201051
Alignment:
Q  135 aatgctagcaacacacattttaacaaatacttttcaacatactctcttcgattggttaaaattcaca 201  Q
    ||||||| ||| ||||||||||||| | |||| |||||| |||||||| |||| ||||| |||||||    
T  201117 aatgctaacaatacacattttaacacacacttatcaacacactctctttgatttgttaagattcaca 201051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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