View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18982_low_54 (Length: 316)

Name: NF18982_low_54
Description: NF18982
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18982_low_54
NF18982_low_54
[»] chr5 (27 HSPs)
chr5 (1-281)||(36165022-36165301)
chr5 (1-94)||(13974409-13974504)
chr5 (6-104)||(11195215-11195314)
chr5 (1-93)||(27797913-27798005)
chr5 (1-104)||(11977723-11977828)
chr5 (1-104)||(21634246-21634351)
chr5 (1-104)||(21642493-21642598)
chr5 (1-97)||(28591544-28591640)
chr5 (1-103)||(4911023-4911132)
chr5 (1-94)||(38370007-38370102)
chr5 (6-104)||(14161812-14161913)
chr5 (1-104)||(1309271-1309376)
chr5 (6-96)||(27557741-27557833)
chr5 (1-94)||(38362062-38362155)
chr5 (1-94)||(843153-843248)
chr5 (1-94)||(34534494-34534589)
chr5 (1-89)||(7736509-7736600)
chr5 (1-94)||(34381723-34381814)
chr5 (1-94)||(9065586-9065678)
chr5 (4-64)||(10344897-10344957)
chr5 (4-97)||(7317156-7317247)
chr5 (6-64)||(32158672-32158730)
chr5 (4-81)||(3024879-3024956)
chr5 (36-93)||(7579523-7579582)
chr5 (42-95)||(7721264-7721319)
chr5 (4-104)||(43584299-43584401)
chr5 (4-64)||(25362765-25362825)
[»] chr6 (26 HSPs)
chr6 (1-95)||(13503765-13503861)
chr6 (1-97)||(13011267-13011365)
chr6 (1-97)||(3988664-3988761)
chr6 (1-97)||(21271322-21271420)
chr6 (1-105)||(8957903-8958011)
chr6 (1-105)||(8961346-8961454)
chr6 (1-89)||(20226148-20226238)
chr6 (1-89)||(22120132-22120222)
chr6 (1-88)||(17828418-17828507)
chr6 (1-94)||(12459241-12459336)
chr6 (1-64)||(577197-577260)
chr6 (1-94)||(32193945-32194039)
chr6 (1-64)||(9940783-9940846)
chr6 (1-94)||(17552169-17552264)
chr6 (6-60)||(12588665-12588719)
chr6 (7-69)||(19689461-19689523)
chr6 (6-104)||(31233534-31233634)
chr6 (1-94)||(1502675-1502770)
chr6 (4-64)||(4850460-4850520)
chr6 (4-64)||(29400073-29400133)
chr6 (1-64)||(32619779-32619842)
chr6 (1-95)||(3847787-3847883)
chr6 (33-94)||(12321500-12321561)
chr6 (32-94)||(18737010-18737074)
chr6 (6-64)||(32429417-32429475)
chr6 (32-86)||(16127940-16127996)
[»] chr8 (25 HSPs)
chr8 (1-97)||(40399797-40399895)
chr8 (1-94)||(41679447-41679539)
chr8 (1-94)||(9812308-9812403)
chr8 (6-94)||(6115927-6116017)
chr8 (1-93)||(43969976-43970069)
chr8 (1-59)||(13496373-13496431)
chr8 (1-88)||(15227705-15227794)
chr8 (1-89)||(15750257-15750347)
chr8 (1-64)||(34796636-34796699)
chr8 (1-94)||(13367873-13367966)
chr8 (1-94)||(5295329-5295423)
chr8 (4-64)||(15160411-15160471)
chr8 (1-104)||(6374548-6374651)
chr8 (1-87)||(42179230-42179317)
chr8 (7-89)||(12339855-12339937)
chr8 (31-89)||(33746067-33746127)
chr8 (4-64)||(396179-396239)
chr8 (5-94)||(24245140-24245231)
chr8 (36-97)||(31233864-31233927)
chr8 (9-60)||(2375805-2375856)
chr8 (1-60)||(14234174-14234233)
chr8 (1-97)||(34156670-34156768)
chr8 (31-94)||(515067-515132)
chr8 (15-89)||(29312120-29312196)
chr8 (4-64)||(39765825-39765885)
[»] chr7 (34 HSPs)
chr7 (6-94)||(4268872-4268962)
chr7 (1-89)||(34012592-34012682)
chr7 (1-95)||(28289350-28289446)
chr7 (1-94)||(6563339-6563434)
chr7 (14-91)||(30312683-30312762)
chr7 (1-64)||(40339594-40339657)
chr7 (4-94)||(42286036-42286128)
chr7 (1-94)||(19303315-19303410)
chr7 (4-89)||(47187790-47187877)
chr7 (6-64)||(4268793-4268851)
chr7 (1-94)||(10476271-10476370)
chr7 (1-93)||(48843688-48843784)
chr7 (1-104)||(25055917-25056020)
chr7 (6-94)||(34274924-34275014)
chr7 (1-59)||(29636184-29636242)
chr7 (1-94)||(25086817-25086913)
chr7 (4-64)||(6747354-6747414)
chr7 (4-64)||(12977649-12977709)
chr7 (4-64)||(12983107-12983167)
chr7 (4-64)||(18292463-18292523)
chr7 (5-94)||(35778653-35778744)
chr7 (1-52)||(21819418-21819469)
chr7 (1-89)||(37490923-37491012)
chr7 (1-80)||(45499758-45499840)
chr7 (1-50)||(7335416-7335465)
chr7 (1-97)||(24780233-24780334)
chr7 (4-104)||(715784-715886)
chr7 (1-64)||(40753383-40753445)
chr7 (6-64)||(2297173-2297231)
chr7 (4-62)||(31883912-31883970)
chr7 (1-104)||(47461286-47461390)
chr7 (1-45)||(21752083-21752127)
chr7 (1-58)||(24133091-24133144)
chr7 (4-64)||(37502447-37502507)
[»] chr1 (34 HSPs)
chr1 (1-93)||(44556991-44557085)
chr1 (1-104)||(29568031-29568136)
chr1 (1-94)||(8894936-8895031)
chr1 (1-94)||(26594990-26595085)
chr1 (7-104)||(8989550-8989649)
chr1 (1-94)||(18794463-18794558)
chr1 (1-94)||(5114-5208)
chr1 (1-64)||(16757151-16757214)
chr1 (4-94)||(14593278-14593368)
chr1 (8-107)||(38947736-38947836)
chr1 (1-93)||(2610758-2610848)
chr1 (1-106)||(25560781-25560888)
chr1 (1-58)||(7191165-7191222)
chr1 (4-110)||(12484543-12484651)
chr1 (1-64)||(31699242-31699305)
chr1 (7-93)||(14607546-14607632)
chr1 (4-94)||(14373344-14373436)
chr1 (3-89)||(51244761-51244849)
chr1 (4-60)||(30293464-30293520)
chr1 (4-64)||(50249438-50249498)
chr1 (4-104)||(26352002-26352104)
chr1 (1-104)||(5225740-5225841)
chr1 (4-94)||(34032011-34032103)
chr1 (1-45)||(27209124-27209168)
chr1 (1-53)||(28538340-28538392)
chr1 (5-78)||(39125732-39125807)
chr1 (4-64)||(52023936-52023996)
chr1 (6-94)||(34047164-34047254)
chr1 (1-51)||(33694388-33694438)
chr1 (4-94)||(11799599-11799691)
chr1 (48-93)||(12124564-12124608)
chr1 (1-58)||(49900715-49900772)
chr1 (4-64)||(12591045-12591105)
chr1 (4-64)||(44257644-44257704)
[»] chr4 (29 HSPs)
chr4 (1-94)||(44651023-44651118)
chr4 (1-94)||(47817874-47817969)
chr4 (1-94)||(45839773-45839865)
chr4 (4-94)||(36558228-36558318)
chr4 (1-104)||(44061129-44061234)
chr4 (1-70)||(11364361-11364430)
chr4 (1-94)||(34413473-34413568)
chr4 (1-93)||(41496340-41496434)
chr4 (1-93)||(47458315-47458408)
chr4 (3-94)||(6991189-6991282)
chr4 (1-94)||(19451131-19451226)
chr4 (1-92)||(10573082-10573176)
chr4 (4-94)||(7905933-7906025)
chr4 (7-97)||(30261400-30261492)
chr4 (46-93)||(26934403-26934450)
chr4 (7-94)||(51733432-51733520)
chr4 (1-89)||(56460221-56460309)
chr4 (4-104)||(37624684-37624786)
chr4 (1-89)||(50203209-50203299)
chr4 (4-62)||(4505464-4505522)
chr4 (1-94)||(30779952-30780041)
chr4 (7-89)||(620107-620191)
chr4 (2-94)||(18052616-18052706)
chr4 (7-60)||(28308857-28308910)
chr4 (1-79)||(44868194-44868273)
chr4 (1-58)||(46392028-46392084)
chr4 (4-64)||(22220328-22220388)
chr4 (7-104)||(38510172-38510271)
chr4 (1-60)||(52162239-52162298)
[»] chr3 (33 HSPs)
chr3 (1-94)||(36844662-36844757)
chr3 (4-94)||(3985989-3986079)
chr3 (1-94)||(27067741-27067829)
chr3 (1-94)||(30315445-30315540)
chr3 (31-94)||(48901872-48901937)
chr3 (7-94)||(48903427-48903516)
chr3 (1-94)||(8817276-8817371)
chr3 (1-93)||(7230815-7230909)
chr3 (7-62)||(40487969-40488024)
chr3 (2-94)||(50646061-50646155)
chr3 (4-93)||(19115514-19115603)
chr3 (1-95)||(38141085-38141181)
chr3 (4-94)||(42886877-42886969)
chr3 (1-94)||(47823338-47823431)
chr3 (46-94)||(21205583-21205631)
chr3 (1-94)||(42072120-42072215)
chr3 (5-89)||(11337547-11337633)
chr3 (1-64)||(19373721-19373784)
chr3 (31-103)||(22857221-22857295)
chr3 (1-94)||(30934728-30934824)
chr3 (39-94)||(31190649-31190706)
chr3 (4-97)||(50038099-50038193)
chr3 (2-94)||(4392619-4392709)
chr3 (4-65)||(4759418-4759479)
chr3 (1-93)||(9189355-9189450)
chr3 (4-64)||(44064417-44064477)
chr3 (4-89)||(45460794-45460883)
chr3 (32-93)||(11017014-11017078)
chr3 (60-97)||(20997461-20997498)
chr3 (7-97)||(30680740-30680832)
chr3 (34-80)||(40717306-40717354)
chr3 (4-77)||(54403215-54403288)
chr3 (4-64)||(42571491-42571551)
[»] chr2 (29 HSPs)
chr2 (1-94)||(37038692-37038787)
chr2 (1-89)||(29412119-29412209)
chr2 (1-94)||(8540174-8540269)
chr2 (1-92)||(10195810-10195903)
chr2 (1-104)||(33056026-33056131)
chr2 (1-94)||(11188172-11188267)
chr2 (5-88)||(14833687-14833773)
chr2 (1-81)||(4658168-4658249)
chr2 (1-104)||(15083081-15083182)
chr2 (7-68)||(27964175-27964236)
chr2 (1-83)||(44712167-44712251)
chr2 (11-73)||(4469591-4469654)
chr2 (1-104)||(9391505-9391611)
chr2 (7-83)||(19164495-19164573)
chr2 (31-97)||(43971941-43972009)
chr2 (7-94)||(7872701-7872788)
chr2 (32-88)||(11132715-11132773)
chr2 (33-93)||(27726327-27726389)
chr2 (1-89)||(36685670-36685759)
chr2 (37-94)||(12565393-12565452)
chr2 (4-64)||(27986166-27986226)
chr2 (4-64)||(28072698-28072758)
chr2 (4-93)||(45423746-45423837)
chr2 (1-104)||(40608519-40608623)
chr2 (31-94)||(7644725-7644792)
chr2 (4-94)||(16792614-16792705)
chr2 (1-58)||(34455827-34455884)
chr2 (4-64)||(22620299-22620359)
chr2 (4-64)||(43427253-43427312)
[»] scaffold0565 (1 HSPs)
scaffold0565 (1-97)||(9874-9972)
[»] scaffold0300 (1 HSPs)
scaffold0300 (1-94)||(4700-4793)
[»] scaffold0136 (1 HSPs)
scaffold0136 (1-99)||(9680-9777)
[»] scaffold0983 (1 HSPs)
scaffold0983 (1-89)||(615-704)
[»] scaffold0026 (1 HSPs)
scaffold0026 (4-94)||(4279-4371)
[»] scaffold0332 (1 HSPs)
scaffold0332 (4-94)||(3743-3835)


Alignment Details
Target: chr5 (Bit Score: 178; Significance: 5e-96; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 36165022 - 36165301
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgtaaaaaacttaaacgacatttattttaaaacagattg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||| || |    
T  36165022 attaggataatttggtaaaataacatttacctttcttttaattaatgcattttttaatatgtgtaaaaaacttaaacggcatttattttgaaacatatgg 36165121  T
Q  101 agtacttattatcctaaaataattttttaatatatttgtttctcgtttagcctgtt-aagnnnnnnnntcaaaccaagaccttgtacaatggttgctaaa 199  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||| |||| ||         |||||||||||||||||||||||||||| |||    
T  36165122 agtacttattatcctaaaataattttttaatatatttgcttctcatttagcttgttaaaaaaataaaatcaaaccaagaccttgtacaatggttgccaaa 36165221  T
Q  200 aaatatatttgctataaaaagatttatataaaaggannnnnnnnnaaaaataaataaataaactttagtcgtttatccaaac 281  Q
    ||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||    
T  36165222 aaatatatttgctataaaaagatttatataaaagga--ttttttaaaaaataaataaataaactttagtcgtttatccaaac 36165301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 13974409 - 13974504
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaata--tgtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||||||||||||||||||||||||  |  |||||||||||||||||||||||||||||  |||||||||| ||||||||||||| ||||||||||    
T  13974409 attaggataatttggtaaaataacacctctctttcttttaattaatgcatttcttaatatgtgtgtaaaaatcttaaacgacattcattttaaaac 13974504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 104
Target Start/End: Original strand, 11195215 - 11195314
Alignment:
Q  6 gataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt-aaaaaacttaaacgacatttattttaaaacagattgagta 104  Q
    ||||||||||||||||||||| |  ||||||||||||||||| |||||||||||| ||| |||||| |||||||||||||||||||||| |||| |||||    
T  11195215 gataatttggtaaaataacatatttctttcttttaattaatggatttcttaatatatgtaaaaaaaattaaacgacatttattttaaaatagatggagta 11195314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 27797913 - 27798005
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgt--gtaaaaaacttaaacgacatttattttaaaa 93  Q
    |||| |||||||||||||||||||||||  ||||||||||||||||| |||| |||||||||  |||||||| ||||||||||||||||||||||    
T  27797913 attaagataatttggtaaaataacattt--ctttcttttaattaatgtattttttaatatgtatgtaaaaaatttaaacgacatttattttaaaa 27798005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 11977723 - 11977828
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaata--tgtgtaaaaaacttaaacgacatttattttaaaacagat 98  Q
    |||||||||||||||||||| ||||| |  |||||||||||||||||||||||||||||  |||||||||| ||||||||||| | ||||| |||| |||    
T  11977723 attaggataatttggtaaaacaacatctctctttcttttaattaatgcatttcttaatatgtgtgtaaaaagcttaaacgacactcattttgaaacggat 11977822  T
Q  99 tgagta 104  Q
     |||||    
T  11977823 ggagta 11977828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 21634246 - 21634351
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaata--tgtgtaaaaaacttaaacgacatttattttaaaacagat 98  Q
    |||| |||| |||||||||||||||| |  |||| ||||||||||||||||||||||||  ||||||||||  |||||||||||| ||||||||||||||    
T  21634246 attatgatactttggtaaaataacatctctctttattttaattaatgcatttcttaatatgtgtgtaaaaactttaaacgacattcattttaaaacagat 21634345  T
Q  99 tgagta 104  Q
     |||||    
T  21634346 ggagta 21634351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 21642493 - 21642598
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaata--tgtgtaaaaaacttaaacgacatttattttaaaacagat 98  Q
    |||| |||| |||||||||||||||| |  |||| ||||||||||||||||||||||||  ||||||||||  |||||||||||| ||||||||||||||    
T  21642493 attatgatactttggtaaaataacatctctctttattttaattaatgcatttcttaatatgtgtgtaaaaactttaaacgacattcattttaaaacagat 21642592  T
Q  99 tgagta 104  Q
     |||||    
T  21642593 ggagta 21642598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 28591640 - 28591544
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt--aaaaaacttaaacgacatttattttaaaacaga 97  Q
    |||||||||||||||||||||||||| |  ||||||||||||||||| |||| |||||||||||  ||||||||| || |||||| |||||||||||||    
T  28591640 attaggataatttggtaaaataacatct--ctttcttttaattaatgtatttattaatatgtgtgtaaaaaactttaatgacattcattttaaaacaga 28591544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 4911132 - 4911023
Alignment:
Q  1 attaggataatttggtaaa-----ataacatttacctttcttttaattaatgcatttcttaata--tgtgtaaaaaacttaaacgacatttattttaaaa 93  Q
    |||||||||||||||||||     |||||||||| ||||||||||||||||| |||||||||||  |||||||||| |||||| |||||| ||||| |||    
T  4911132 attaggataatttggtaaaataaaataacatttatctttcttttaattaatgtatttcttaatatgtgtgtaaaaaccttaaatgacattcattttgaaa 4911033  T
Q  94 cagattgagt 103  Q
    ||||| ||||    
T  4911032 cagatggagt 4911023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 38370007 - 38370102
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttctta--atatgtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||||||||||||||||||||||||| |  |||| ||||||||||||||||| |||  ||||||||||||| ||||||| ||| | ||||||||||    
T  38370007 attaggataatttggtaaaataacatatctctttattttaattaatgcatttattaatatatgtgtaaaaaccttaaacaacaatcattttaaaac 38370102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 104
Target Start/End: Complemental strand, 14161913 - 14161812
Alignment:
Q  6 gataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt---aaaaaacttaaacgacatttattttaaaacagattgag 102  Q
    ||||||||| |||||||||||    ||||||||||||||||||||||||||||||||||   ||||| ||||||||||||| ||||| |||| || ||||    
T  14161913 gataatttgataaaataacatccttctttcttttaattaatgcatttcttaatatgtgtgcaaaaaaccttaaacgacattcattttgaaacggagtgag 14161814  T
Q  103 ta 104  Q
    ||    
T  14161813 ta 14161812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 1309376 - 1309271
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttattttaaaacagat 98  Q
    |||| ||||||||| ||||||||||| |   |||||||||||||||||||||||||||||  ||||||||| |||||| |||||| ||||| |||| |||    
T  1309376 attatgataatttgataaaataacatatctatttcttttaattaatgcatttcttaatatgtgtgtaaaaaccttaaatgacattcattttgaaacggat 1309277  T
Q  99 tgagta 104  Q
     |||||    
T  1309276 ggagta 1309271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 27557833 - 27557741
Alignment:
Q  6 gataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgtaaaaaa--cttaaacgacatttattttaaaacag 96  Q
    ||||||||| ||||||||||| |    ||||||||||||||| ||||||||||||||||| ||||   |||||||||||||||||||||||||    
T  27557833 gataatttgataaaataacatctcttattcttttaattaatgtatttcttaatatgtgtataaaatctttaaacgacatttattttaaaacag 27557741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 38362155 - 38362062
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    ||||||||||||| ||||||||||||||  ||||||||||||||||  ||||  ||||||||||||||| ||||||  |||||  |||||||||    
T  38362155 attaggataatttagtaaaataacatttctctttcttttaattaatttattttataatatgtgtaaaaaccttaaataacattcgttttaaaac 38362062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 843153 - 843248
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaata--tgtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||||||||||||||||||||||||| |  | |||||||||||||||||||||||||||  |||| | ||| |||||||| |||| ||||| ||||    
T  843153 attaggataatttggtaaaataacatatctccttcttttaattaatgcatttcttaatatttgtggagaaatcttaaacgtcattcattttgaaac 843248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 34534494 - 34534589
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaata--tgtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    ||||||||||||||||||||||| || |  |||||||||||||||||||||| ||||||  |||||||||| || |||| ||||| ||||| ||||    
T  34534494 attaggataatttggtaaaataatatctctctttcttttaattaatgcattttttaatatgtgtgtaaaaacctcaaacaacattcattttgaaac 34534589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 7736509 - 7736600
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgca-tttcttaata--tgtgtaaaaaacttaaacgacatttatttt 89  Q
    ||||||||||| |||||||||||||| |  |||| |||||||||||||| ||| ||||||  |||||||||| ||||||||||||| |||||    
T  7736509 attaggataatatggtaaaataacatatctctttattttaattaatgcatttttttaatatgtgtgtaaaaatcttaaacgacattcatttt 7736600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 34381814 - 34381723
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt--aaaaaacttaaacgacatttattttaaaac 94  Q
    |||||||||||||| |||||||||||    |||| ||||||| |||| ||||||||||||||||  ||||| ||||||| ||||||||||| ||||    
T  34381814 attaggataatttgttaaaataacat----cttttttttaatcaatgtatttcttaatatgtgtgtaaaaaccttaaactacatttattttgaaac 34381723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 9065678 - 9065586
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||| ||||||| |||||||||| ||| | ||||||||||||||||| |||||||||||| |||  ||| ||||||| ||||| ||||| ||||    
T  9065678 attatgataattcggtaaaataaaatt-atctttcttttaattaatgtatttcttaatatatgtttaaaccttaaacaacattcattttgaaac 9065586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 10344957 - 10344897
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt 64  Q
    |||||||||||||||||||||  ||  |||||||||||| | |||||||||||||||||||    
T  10344957 aggataatttggtaaaataaccattctctttcttttaatcattgcatttcttaatatgtgt 10344897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 7317156 - 7317247
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgtaaaaaacttaaacgacatttattttaaaacaga 97  Q
    |||||||||||||||||||||  ||  |||||||||||| | |||||||||||  ||||||||| | || |||||||| | ||||| |||||||    
T  7317156 aggataatttggtaaaataaccattctctttcttttaatcattgcatttctta--atgtgtaaacatctaaaacgacactcattttgaaacaga 7317247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 32158672 - 32158730
Alignment:
Q  6 gataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt 64  Q
    |||||||||||||||||||  ||  |||||||||||| | |||||||||||||||||||    
T  32158672 gataatttggtaaaataaccattctctttcttttaatcattgcatttcttaatatgtgt 32158730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 3024956 - 3024879
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgtaaaaaacttaaacgaca 81  Q
    |||||||||||||||||||||  ||  ||||||||||||   ||||||||||||| |||||||| | || ||||||||    
T  3024956 aggataatttggtaaaataaccattctctttcttttaatcgttgcatttcttaatgtgtgtaaacacctaaaacgaca 3024879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 7579582 - 7579523
Alignment:
Q  36 ttttaattaatgcatttcttaata--tgtgtaaaaaacttaaacgacatttattttaaaa 93  Q
    ||||||||||||||||| | ||||  |||||||||| ||||||||| |||||||||||||    
T  7579582 ttttaattaatgcatttatcaatacgtgtgtaaaaaccttaaacgatatttattttaaaa 7579523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 7721264 - 7721319
Alignment:
Q  42 ttaatgcatttcttaatatgtgtaaaaaa--cttaaacgacatttattttaaaaca 95  Q
    ||||||||||| |||||||||||| ||||  ||||||||||||| |||||||||||    
T  7721264 ttaatgcatttattaatatgtgtataaaaaccttaaacgacattcattttaaaaca 7721319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 43584401 - 43584299
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttattttaaaacagattga 101  Q
    ||||||||||||||||||||   ||  |||||||||||| | || ||||||||||||  ||||||| | || |||||||| ||| |||||||| ||| ||    
T  43584401 aggataatttggtaaaataatcattctctttcttttaatcattgtatttcttaatatgtgtgtaaacacctaaaacgacacttactttaaaacggatgga 43584302  T
Q  102 gta 104  Q
    |||    
T  43584301 gta 43584299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 25362825 - 25362765
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt 64  Q
    |||||| |||||||||| |||  ||  |||||||||||| | |||||||||||||||||||    
T  25362825 aggatattttggtaaaacaaccattctctttcttttaatcattgcatttcttaatatgtgt 25362765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 1e-31; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 13503861 - 13503765
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttattttaaaaca 95  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||| |||||    
T  13503861 attaggataatttggtaaaataacatttctctttcttttaattaatgcatttcttaatatgtgtgtaaaaatcttaaacgacatttattttgaaaca 13503765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 13011365 - 13011267
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttattttaaaacaga 97  Q
    |||| ||||||||||||||||||||| |  ||||||||||||||||||||||||||||||  ||||||||| |||||||||| || ||||| |||||||    
T  13011365 attaagataatttggtaaaataacatctctctttcttttaattaatgcatttcttaatatgtgtgtaaaaatcttaaacgacgttcattttgaaacaga 13011267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 3988761 - 3988664
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt--aaaaaacttaaacgacatttattttaaaacaga 97  Q
    |||| ||||||||||||||||||||| |  |||||||||||||| ||||||||| |||||||||  ||||| ||||||||||||| |||||||||||||    
T  3988761 attatgataatttggtaaaataacatctctctttcttttaatta-tgcatttctcaatatgtgtgtaaaaatcttaaacgacattcattttaaaacaga 3988664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 21271420 - 21271322
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttattttaaaacaga 97  Q
    ||||||||| |||||||||||||||| |  |||| |||||| ||||||||||||||||||  ||||||||| ||||||||||||| ||||| |||||||    
T  21271420 attaggatactttggtaaaataacatctctctttattttaaataatgcatttcttaatatgtgtgtaaaaaccttaaacgacattcattttgaaacaga 21271322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 8957903 - 8958011
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaata----tgtgtaaaaaacttaaacgacatttattttaaaacag 96  Q
    |||||||||||||||||| ||||||| |  ||||| ||||||||||| |||||||||||    |||||||||| ||||||||||||| |||||| ||| |    
T  8957903 attaggataatttggtaagataacatatctctttcatttaattaatgtatttcttaatatgtgtgtgtaaaaaccttaaacgacattcattttagaacgg 8958002  T
Q  97 attgagtac 105  Q
    | |||||||    
T  8958003 agtgagtac 8958011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 8961454 - 8961346
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat----gtgtaaaaaacttaaacgacatttattttaaaacag 96  Q
    |||||||||||||||||| ||||||| |  ||||| ||||||||||| ||||||||||||    ||||||||| ||||||||||||| |||||| ||| |    
T  8961454 attaggataatttggtaagataacatatctctttcatttaattaatgtatttcttaatatgtgtgtgtaaaaaccttaaacgacattcattttagaacgg 8961355  T
Q  97 attgagtac 105  Q
    | |||||||    
T  8961354 agtgagtac 8961346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 20226238 - 20226148
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttctta--atatgtgtaaaaaacttaaacgacatttatttt 89  Q
    ||||| |||||||||||||||||||| |  |||||||| |||||||||||||||||  ||||||| ||||| ||||||||||||| |||||    
T  20226238 attagtataatttggtaaaataacatctctctttctttaaattaatgcatttcttaatatatgtggaaaaaccttaaacgacattcatttt 20226148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 22120222 - 22120132
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttctta--atatgtgtaaaaaacttaaacgacatttatttt 89  Q
    ||||| |||||||||||||||||||| |  |||||||| |||||||||||||||||  ||||||| ||||| ||||||||||||| |||||    
T  22120222 attagtataatttggtaaaataacatctctctttctttaaattaatgcatttcttaatatatgtggaaaaaccttaaacgacattcatttt 22120132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 17828418 - 17828507
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaa--tatgtgtaaaaaacttaaacgacatttattt 88  Q
    |||| ||||||||||||||||||||| |  |||||||||||||||||||||||||||  | |||||| ||| ||||||| ||||||||||    
T  17828418 attaagataatttggtaaaataacatctttctttcttttaattaatgcatttcttaatttgtgtgtagaaaccttaaactacatttattt 17828507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 12459336 - 12459241
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttctta--atatgtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    ||||||||||||||||||||||| || |  ||||||||||||||||| ||||||||  || |||||||||| ||||||| ||||| ||||| ||||    
T  12459336 attaggataatttggtaaaataatatctttctttcttttaattaatgtatttcttagtatgtgtgtaaaaaccttaaacaacattcatttttaaac 12459241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 577197 - 577260
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt 64  Q
    ||||||||||||| ||||||||||||||  |||| ||||||||||||||||||||||| |||||    
T  577197 attaggataatttagtaaaataacatttctctttattttaattaatgcatttcttaatctgtgt 577260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 32193945 - 32194039
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttctta--atatgtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||||||||||||||||||||||||| | |  || ||||| ||||| |||||||||  ||||||||||||| ||||||||||||| ||||| ||||    
T  32193945 attaggataatttggtaaaataacatct-ctatttttttatttaatacatttcttaatatatgtgtaaaaaccttaaacgacattcattttgaaac 32194039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 9940783 - 9940846
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt 64  Q
    |||||||||||||||||||||||||| |  |||||||||| || |||||||||||||| |||||    
T  9940783 attaggataatttggtaaaataacatctctctttcttttagttgatgcatttcttaatctgtgt 9940846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 17552264 - 17552169
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt-aaaaaactt-aaacgacatttattttaaaac 94  Q
    ||||||||||||||||||||| |||| |  ||||||||||||||||| |||| ||||| |||||  |||||||| |||||||||| ||||| ||||    
T  17552264 attaggataatttggtaaaattacatctctctttcttttaattaatgtattttttaatctgtgtgtaaaaacttaaaacgacattcattttgaaac 17552169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 12588665 - 12588719
Alignment:
Q  6 gataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat 60  Q
    |||||||||||||||||| || |  ||||||||||||||||||||||||||||||    
T  12588665 gataatttggtaaaataaaatctctctttcttttaattaatgcatttcttaatat 12588719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 19689461 - 19689523
Alignment:
Q  7 ataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgtaaaaa 69  Q
    ||||||||||||||||||  ||| |||||||||||| | ||||||| ||||||||||||||||    
T  19689461 ataatttggtaaaataaccattatctttcttttaatcattgcattttttaatatgtgtaaaaa 19689523  T

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Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 104
Target Start/End: Complemental strand, 31233634 - 31233534
Alignment:
Q  6 gataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttattttaaaacagattgagt 103  Q
    ||||| |||||| ||||  ||||  ||||||||||||||||| ||||||||||||  ||||||||| |||||| || ||| ||||| ||||||| |||||    
T  31233634 gataacttggtagaatattatttctctttcttttaattaatgtatttcttaatatgtgtgtaaaaaccttaaaagatattcattttgaaacagagtgagt 31233535  T
Q  104 a 104  Q
    |    
T  31233534 a 31233534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 1502770 - 1502675
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatg--tgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||| ||||||||||||||||||||| |   ||||||||||| ||||||||||||| ||||  |||||||| |||| |||| ||| ||||| ||||    
T  1502770 attaagataatttggtaaaataacatctctatttcttttaatcaatgcatttcttattatgtatgtaaaaatcttagacgatattcattttgaaac 1502675  T

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Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 4850520 - 4850460
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt 64  Q
    |||||||||||||||||||||  ||  |||||||||||| | |||||||||||||||||||    
T  4850520 aggataatttggtaaaataaccattctctttcttttaatcattgcatttcttaatatgtgt 4850460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 29400073 - 29400133
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt 64  Q
    |||||||||||||||||||||  ||  |||||||||||| | |||||||||||||||||||    
T  29400073 aggataatttggtaaaataaccattctctttcttttaatcattgcatttcttaatatgtgt 29400133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 32619842 - 32619779
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt 64  Q
    |||| ||||||||  ||| |||||||||  ||||||||||||||||| ||||||||||||||||    
T  32619842 attaagataatttaataatataacatttctctttcttttaattaatgtatttcttaatatgtgt 32619779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 3847787 - 3847883
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttattttaaaaca 95  Q
    |||| |||||||  ||||||||||||    ||||||||||||||||  ||||||||||||  ||||||||  ||||||||||||| ||||| |||||    
T  3847787 attaagataattctgtaaaataacatccttctttcttttaattaatttatttcttaatatgcgtgtaaaagtcttaaacgacattcattttgaaaca 3847883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 12321561 - 12321500
Alignment:
Q  33 ttcttttaattaatgcatttcttaatatgtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||||||||||||||||||| ||||||| | |  ||| ||||||||| ||||||||||||||    
T  12321561 ttcttttaattaatgcattttttaatatatttgtaaatcttaaacgatatttattttaaaac 12321500  T

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Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 18737074 - 18737010
Alignment:
Q  32 tttcttttaattaatgcatttcttaatatgt--gtaaaaaacttaaacgacatttattttaaaac 94  Q
    ||||||||||||||||||||| |||||||||  |||||||  |||||||||||| ||||| ||||    
T  18737074 tttcttttaattaatgcattttttaatatgtgcgtaaaaactttaaacgacattaattttcaaac 18737010  T

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Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 32429417 - 32429475
Alignment:
Q  6 gataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt 64  Q
    ||||||||||||||||||   ||  |||||||||||| | |||||||||||||||||||    
T  32429417 gataatttggtaaaataatcattctctttcttttaatcattgcatttcttaatatgtgt 32429475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 16127996 - 16127940
Alignment:
Q  32 tttcttttaattaatgcatttctta--atatgtgtaaaaaacttaaacgacatttat 86  Q
    |||||||||||||||||||||||||  |||| ||||||||  |||||| ||||||||    
T  16127996 tttcttttaattaatgcatttcttaatatatatgtaaaaactttaaaccacatttat 16127940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 40399895 - 40399797
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttctta--atatgtgtaaaaaacttaaacgacatttattttaaaacaga 97  Q
    |||| ||||||||||||||||||||| |  ||||||||||||||||||||||||||  |||||||||||||  |||||||||||||||||| |||||||    
T  40399895 attatgataatttggtaaaataacatatctctttcttttaattaatgcatttcttaatatatgtgtaaaaactttaaacgacatttattttgaaacaga 40399797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 41679447 - 41679539
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||| ||||||||||||||||||||  |  ||||||||||||||||||||||||| || ||||| |||| ||||||||||||||||||||||||    
T  41679447 attatgataatttggtaaaataacacctctctttcttttaattaatgcatttctttatgtgtgt-aaaatcttaaacgacatttattttaaaac 41679539  T

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Target: chr8; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 9812308 - 9812403
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtg--taaaaaacttaaacgacatttattttaaaac 94  Q
    |||||||||||||||||||||||||| |  |||| ||||||||| ||||||||||||||||||  |||||| |||||||| |||| ||||| ||||    
T  9812308 attaggataatttggtaaaataacatctttctttattttaattagtgcatttcttaatatgtgtataaaaaccttaaacggcattcattttgaaac 9812403  T

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Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 6116017 - 6115927
Alignment:
Q  6 gataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    ||||| ||||||||||||||| | ||||||||||||||||||||||| |||||||  ||||||||| ||||||||||| | ||||| ||||    
T  6116017 gataagttggtaaaataacatctccctttcttttaattaatgcattttttaatatgtgtgtaaaaaccttaaacgacactcattttgaaac 6115927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 43970069 - 43969976
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtg--taaaaaacttaaacgacatttattttaaaa 93  Q
    |||||||||||||| |||||||||||||   ||||||||||||||||||||||||| ||||||  |||||| |||||||| |||| |||||||||    
T  43970069 attaggataatttgataaaataacattttt-tttcttttaattaatgcatttcttagtatgtgtataaaaatcttaaacggcattcattttaaaa 43969976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 13496373 - 13496431
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaata 59  Q
    |||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||    
T  13496373 attaggataatttggtaaaataacatctttctttcttttaattaatgcatttcttaata 13496431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 15227705 - 15227794
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttattt 88  Q
    ||||| |||||||| ||||||||||| |   |||||||||||||||||||||||||||||  ||||||||| ||||||||||||| ||||    
T  15227705 attagaataatttgataaaataacatctttttttcttttaattaatgcatttcttaatatgcgtgtaaaaatcttaaacgacattcattt 15227794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 15750347 - 15750257
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt-aaaaaact-taaacgacatttatttt 89  Q
    ||||||||||||||||||||||| || |  ||||||||||||||||| ||||||||||||||||  ||||||| ||||||||||| |||||    
T  15750347 attaggataatttggtaaaataatatctctctttcttttaattaatgtatttcttaatatgtgtgtaaaaactataaacgacattcatttt 15750257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 34796699 - 34796636
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt 64  Q
    |||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||| ||||||    
T  34796699 attaggataatttgataaaataacatatctctttcttttaattaatgcatttcttaacatgtgt 34796636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 13367966 - 13367873
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    ||||||||||| |||||||||||||| | | |||  |||||||||| |||||||||||||  ||||||||| ||||||| | ||||||||| ||||    
T  13367966 attaggataatatggtaaaataacatcttctttt--tttaattaatacatttcttaatatgtgtgtaaaaaccttaaacaatatttattttgaaac 13367873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 5295423 - 5295329
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    ||||||||||||||||||||||  || |  |||||||||||| ||| |||||||||||||  |||||||||  |||||| ||||| ||||||||||    
T  5295423 attaggataatttggtaaaatat-atatctctttcttttaatcaatacatttcttaatatgtgtgtaaaaactttaaacaacattcattttaaaac 5295329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 15160471 - 15160411
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt 64  Q
    |||||||||||||||||||||  ||  |||||||||||| | |||||||||||||||||||    
T  15160471 aggataatttggtaaaataaccattctctttcttttaatcattgcatttcttaatatgtgt 15160411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 6374548 - 6374651
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgtaaaaaa--cttaaacgacatttattttaaaacagat 98  Q
    |||| ||||||||||||||||||||| |   ||| |||||||||||| ||||| |||||| | || ||||  |||||||||| || |||||||||||||     
T  6374548 attatgataatttggtaaaataacatctt--ttttttttaattaatgtatttcctaatatatttataaaaaccttaaacgacgttcattttaaaacagaa 6374645  T
Q  99 tgagta 104  Q
    ||||||    
T  6374646 tgagta 6374651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 42179230 - 42179317
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt-aaaaaacttaaacgacatttatt 87  Q
    |||| |||||||| |||||||| |||    ||||||||||||||||| |||| |||||||||||  |||||||||||| |||||||||    
T  42179230 attatgataatttagtaaaatatcatcactctttcttttaattaatgtattttttaatatgtgtgtaaaaacttaaaccacatttatt 42179317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 12339855 - 12339937
Alignment:
Q  7 ataatttggtaaaataacatttacctttcttttaattaatgcatttcttaata--tgtgtaaaaaacttaaacgacatttatttt 89  Q
    ||||||| ||||||||||| ||  || ||||||||| | ||||||||||||||  |||||||||| ||||||||||||| |||||    
T  12339855 ataattttgtaaaataacaatt--ctctcttttaatcattgcatttcttaatatgtgtgtaaaaaccttaaacgacattcatttt 12339937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 33746127 - 33746067
Alignment:
Q  31 ctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttatttt 89  Q
    |||||||||||||||||||||| |||||||  ||||||||| |||||| |||||| |||||    
T  33746127 ctttcttttaattaatgcattttttaatatgcgtgtaaaaaccttaaatgacattcatttt 33746067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 396239 - 396179
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt 64  Q
    ||||||||||||||||||||   ||  |||||||||||| | |||||||||||||||||||    
T  396239 aggataatttggtaaaataatcattctctttcttttaatcattgcatttcttaatatgtgt 396179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 24245231 - 24245140
Alignment:
Q  5 ggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    ||||||||||||||||| ||  || ||||| || |||| | || ||||||||||||  ||||||||| ||||||||||||| ||||| ||||    
T  24245231 ggataatttggtaaaattactattcccttttttctaatcattggatttcttaatatgtgtgtaaaaatcttaaacgacattcattttgaaac 24245140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 31233927 - 31233864
Alignment:
Q  36 ttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttattttaaaacaga 97  Q
    |||||||||||| ||||||||||||  ||||||||| ||||| ||||||| ||||| |||||||    
T  31233927 ttttaattaatgtatttcttaatatgtgtgtaaaaatcttaagcgacattcattttgaaacaga 31233864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 2375856 - 2375805
Alignment:
Q  9 aatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat 60  Q
    |||||| ||||||||||| |  |||||||||||||||||||||| |||||||    
T  2375856 aatttgataaaataacatctctctttcttttaattaatgcatttattaatat 2375805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 14234233 - 14234174
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat 60  Q
    ||||||||||||||| |||||||||| |  ||||| ||||||||||| |||| |||||||    
T  14234233 attaggataatttggcaaaataacatatctctttcgtttaattaatgtattttttaatat 14234174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 34156670 - 34156768
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttattttaaaacaga 97  Q
    |||| ||||||||| ||||||||||  |   |||||||||||||||||||||| ||||||   ||||||||  ||||||| |||| ||||| |||||||    
T  34156670 attatgataatttgataaaataacagctctatttcttttaattaatgcatttcataatatacatgtaaaaactttaaacgccattcattttgaaacaga 34156768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 94
Target Start/End: Original strand, 515067 - 515132
Alignment:
Q  31 ctttcttttaattaatgcatttcttaatatgtg--taaaaaacttaaacgacatttattttaaaac 94  Q
    |||| ||||||||||| ||||||||||||||||  |||||| |||||| |||||| ||||| ||||    
T  515067 ctttattttaattaatacatttcttaatatgtgtataaaaaccttaaatgacattcattttgaaac 515132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 29312196 - 29312120
Alignment:
Q  15 gtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgta--aaaaacttaaacgacatttatttt 89  Q
    |||||||||||| |   |||||||||||||||| |||| ||||| |||||   |||| |||||||||||||||||||    
T  29312196 gtaaaataacatctctttttcttttaattaatgtattttttaatctgtgtgtgaaaaccttaaacgacatttatttt 29312120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 39765885 - 39765825
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt 64  Q
    ||||||||||||||||||||   ||  |||||||||||| | || ||||||||||||||||    
T  39765885 aggataatttggtaaaataagcattctctttcttttaatcattgtatttcttaatatgtgt 39765825  T

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Target: chr7 (Bit Score: 60; Significance: 1e-25; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 4268872 - 4268962
Alignment:
Q  6 gataatttggtaaaataacatttacctttcttttaattaatgcatttcttaata--tgtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||||||||  |||||||||| ||||||||||||| ||||||||||    
T  4268872 gataatttggtaaaataacatctttctttcttttaattaatgcatttcttaatatgtgtgtaaaaaccttaaacgacattcattttaaaac 4268962  T

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Target: chr7; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 34012592 - 34012682
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttctta--atatgtgtaaaaaacttaaacgacatttatttt 89  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||  ||||||||||||| |||||| | |||| |||||    
T  34012592 attaggataatttggtaaaataacatttatctttcttttaattaatggatttcttaatatatgtgtaaaaaccttaaatgccattcatttt 34012682  T

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Target: chr7; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 28289350 - 28289446
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaata--tgtgtaaaaaacttaaacgacatttattttaaaaca 95  Q
    |||||||||||||||||||||||||| |  |||| |||||||||||| |||| ||||||  |||||||||| ||||||||||||| |||||||||||    
T  28289350 attaggataatttggtaaaataacatctctctttattttaattaatgtatttattaatatgtgtgtaaaaaccttaaacgacattcattttaaaaca 28289446  T

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Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 6563434 - 6563339
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttctta--atatgtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||||||||||||| ||||||||||| |  ||||||||||||||||| ||||||||  ||||| |||||||| |||||||||||| ||||||||||    
T  6563434 attaggataatttgataaaataacatgtctctttcttttaattaatgtatttcttaatatatgcgtaaaaaatttaaacgacattcattttaaaac 6563339  T

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Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 30312683 - 30312762
Alignment:
Q  14 ggtaaaataacatttacctttcttttaattaatgcatttctta--atatgtgtaaaaaacttaaacgacatttattttaa 91  Q
    |||||||||||||||| |||||||||||||||||||||| |||  ||||||||||||| ||||||||||||| |||||||    
T  30312683 ggtaaaataacatttatctttcttttaattaatgcattttttaatatatgtgtaaaaaccttaaacgacattcattttaa 30312762  T

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Target: chr7; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 40339594 - 40339657
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt 64  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||    
T  40339594 attaggataatttggtaaaataacatttctctttcttttaattaatgcatttcttaatctgtgt 40339657  T

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Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 42286036 - 42286128
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatg--tgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||||||||||||||||||||| ||  |||| ||||||| | ||||||||||||||||  |||||||| ||||||||||||| ||||||||||    
T  42286036 aggataatttggtaaaataacaattctctttattttaatcattgcatttcttaatatgtttgtaaaaaccttaaacgacattcattttaaaac 42286128  T

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Target: chr7; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 19303410 - 19303315
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatg--tgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||| |||||||| ||||||||||||||  |||||||||||||||||||||| ||||||||  ||||||||  |||||||| ||||||||| ||||    
T  19303410 attatgataatttagtaaaataacatttctctttcttttaattaatgcattttttaatatgcatgtaaaaactttaaacgaaatttattttgaaac 19303315  T

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Target: chr7; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 47187790 - 47187877
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatg--tgtaaaaaacttaaacgacatttatttt 89  Q
    |||||||||||||||||||||| ||  |||||||||||| ||||||||| ||||||||  |||||||| |||||||||||||| ||||    
T  47187790 aggataatttggtaaaataacaattctctttcttttaatcaatgcattttttaatatgcatgtaaaaaccttaaacgacatttgtttt 47187877  T

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Target: chr7; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 4268793 - 4268851
Alignment:
Q  6 gataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt 64  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||    
T  4268793 gataatttggtaaaataacatctctctttcttttaattaatgcatttcttaatatgtgt 4268851  T

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Target: chr7; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 10476271 - 10476370
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttctt----ttaattaatgcatttcttaata--tgtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||||||||| ||||||  |||||||||| ||||||| |||| |||||||||||    
T  10476271 attaggataatttgataaaataacatttctctttcttttaattaattaatgcatttattaatatgtgtgtaaaaaccttaaacaacatctattttaaaac 10476370  T

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Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 48843688 - 48843784
Alignment:
Q  1 attaggataatttggt--aaaataacatttacctttcttttaattaatgcatttcttaatatg--tgtaaaaaacttaaacgacatttattttaaaa 93  Q
    ||||||||||||||||  |||||||||| |  |||||||||||| | ||||||||||||||||  |||||||| ||||||||||| | |||||||||    
T  48843688 attaggataatttggtgtaaaataacatctctctttcttttaatcagtgcatttcttaatatgtatgtaaaaaccttaaacgacactcattttaaaa 48843784  T

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Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 25055917 - 25056020
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttattttaaaacagat 98  Q
    |||| |||||| |||||||||||||| |  |||||||||||||||| ||||| |||||||  |||||||||  |||||| ||||| |||||||||| |||    
T  25055917 attatgataatgtggtaaaataacatct--ctttcttttaattaatacattttttaatatatgtgtaaaaactttaaacaacattcattttaaaacggat 25056014  T
Q  99 tgagta 104  Q
     |||||    
T  25056015 ggagta 25056020  T

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Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 34274924 - 34275014
Alignment:
Q  6 gataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||||||||||||||||||  ||  |||||||||||| | || ||||||||||||  ||||||| | || |||||||||||||||||||||    
T  34274924 gataatttggtaaaataaccattctctttcttttaatcattgtatttcttaatatgcgtgtaaacacctaaaacgacatttattttaaaac 34275014  T

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Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 29636242 - 29636184
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaata 59  Q
    |||||||||||||| ||||||||||| |  ||||||||| |||||||||||||||||||    
T  29636242 attaggataatttgataaaataacatctctctttcttttgattaatgcatttcttaata 29636184  T

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Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 25086913 - 25086817
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgca-tttcttaatatgtg--taaaaaacttaaacgacatttattttaaaac 94  Q
    ||||| |||||||| |||||||  ||||  ||||||||||||||||||| ||| ||||||||||  |||||| |||||||||| || ||||||||||    
T  25086913 attagaataatttgataaaatactatttctctttcttttaattaatgcatttttttaatatgtgcataaaaatcttaaacgacgttcattttaaaac 25086817  T

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Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 6747354 - 6747414
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt 64  Q
    |||||||||||||||||||||  ||  |||||||||||| | |||||||||||||||||||    
T  6747354 aggataatttggtaaaataaccattctctttcttttaatcattgcatttcttaatatgtgt 6747414  T

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Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 12977709 - 12977649
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt 64  Q
    |||||||||||||||||||||  ||  |||||||||||| | |||||||||||||||||||    
T  12977709 aggataatttggtaaaataaccattctctttcttttaatcattgcatttcttaatatgtgt 12977649  T

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Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 12983167 - 12983107
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt 64  Q
    |||||||||||||||||||||  ||  |||||||||||| | |||||||||||||||||||    
T  12983167 aggataatttggtaaaataaccattctctttcttttaatcattgcatttcttaatatgtgt 12983107  T

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Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 18292463 - 18292523
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt 64  Q
    |||||||||||||||||||||  ||  |||||||||||| | |||||||||||||||||||    
T  18292463 aggataatttggtaaaataaccattctctttcttttaatcattgcatttcttaatatgtgt 18292523  T

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Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 35778653 - 35778744
Alignment:
Q  5 ggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaa--tatgtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    ||||||||||||||||| ||  ||  |||| || |||| ||||||||||||||  |||||||||||| ||||||| ||||||||||| ||||    
T  35778653 ggataatttggtaaaattactattcactttattctaatcaatgcatttcttaacatatgtgtaaaaaccttaaacaacatttattttgaaac 35778744  T

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Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 21819418 - 21819469
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcattt 52  Q
    |||||||||||||||||||||||||| |  ||||||||||||||||| ||||    
T  21819418 attaggataatttggtaaaataacatctctctttcttttaattaatgtattt 21819469  T

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Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 37490923 - 37491012
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt--aaaaaacttaaacgacatttatttt 89  Q
    |||| ||||||||||||||||| ||  | | ||| || |||||||| |||||||||||||||||  ||||| |||||||||||||||||||    
T  37490923 attaagataatttggtaaaatatcacat-ctttttttctaattaattcatttcttaatatgtgtgtaaaaaccttaaacgacatttatttt 37491012  T

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Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 45499840 - 45499758
Alignment:
Q  1 attaggataatttggtaaaataacatttac-ctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgac 80  Q
    |||||||||||||||||||||| |||   | |||| |||||||||||| ||||||||||||  ||||||||| ||||||||||    
T  45499840 attaggataatttggtaaaatagcatcatctctttattttaattaatgtatttcttaatatgtgtgtaaaaagcttaaacgac 45499758  T

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Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 7335416 - 7335465
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcat 50  Q
    |||| ||||||||||||||||||||| |  ||||||||||||||||||||    
T  7335416 attatgataatttggtaaaataacatctttctttcttttaattaatgcat 7335465  T

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Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 24780334 - 24780233
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgt--gtaaaaaacttaaac---gacatttattttaaaaca 95  Q
    ||||||||||||| |||||||||||| |   ||||||||||||||| ||||| |||| ||||  ||||||| |||||||   ||| || |||||||||||    
T  24780334 attaggataatttagtaaaataacatctctttttcttttaattaatacattttttaacatgtacgtaaaaaccttaaactaagactttcattttaaaaca 24780235  T
Q  96 ga 97  Q
    ||    
T  24780234 ga 24780233  T

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Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 715886 - 715784
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttctta--atatgtgtaaaaaacttaaacgacatttattttaaaacagattga 101  Q
    ||||||||||||||||||||   ||  |||||||||||| | |||||||||||  ||||||||||| | || |||||||| | ||||| |||| ||| ||    
T  715886 aggataatttggtaaaataatgattttctttcttttaatcattgcatttcttaatatatgtgtaaagagctaaaacgacactcattttgaaacggatgga 715787  T
Q  102 gta 104  Q
    |||    
T  715786 gta 715784  T

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Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 40753445 - 40753383
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt 64  Q
    ||||| ||||||||||||||||| || |   ||| |||||||||||||||||||||||||||||    
T  40753445 attagaataatttggtaaaataatatcttttttt-ttttaattaatgcatttcttaatatgtgt 40753383  T

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Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 2297173 - 2297231
Alignment:
Q  6 gataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt 64  Q
    ||||||||||||||||||   ||  |||||||||||| | |||||||||||||||||||    
T  2297173 gataatttggtaaaataatcattctctttcttttaatcattgcatttcttaatatgtgt 2297231  T

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Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 31883912 - 31883970
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgt 62  Q
    ||||||||||||||||||||   ||  |||||||||||| | |||||||||||||||||    
T  31883912 aggataatttggtaaaataatcattctctttcttttaatcattgcatttcttaatatgt 31883970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 47461390 - 47461286
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttattttaaaacagat 98  Q
    |||||||||||||| |||||| |||| |   ||| |||||||||||| ||||||||||||  |||||||||  ||||||||| || ||||| |||| |||    
T  47461390 attaggataatttgataaaatgacatcttttttt-ttttaattaatgtatttcttaatatgtgtgtaaaaattttaaacgacgttcattttgaaacggat 47461292  T
Q  99 tgagta 104  Q
     |||||    
T  47461291 ggagta 47461286  T

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Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 21752127 - 21752083
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaa 45  Q
    ||||| ||||||||||||||||||||||  |||||||||| ||||    
T  21752127 attagaataatttggtaaaataacatttttctttcttttatttaa 21752083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 24133144 - 24133091
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaat 58  Q
    ||||| ||||||||||||||||| ||    ||||||||||||||||| ||||||||||    
T  24133144 attagtataatttggtaaaataatat----ctttcttttaattaatgtatttcttaat 24133091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 37502447 - 37502507
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt 64  Q
    ||||||||||||||||||||   ||  |||||||||||| | || ||||||||||||||||    
T  37502447 aggataatttggtaaaataatcattctctttcttttaatcattgtatttcttaatatgtgt 37502507  T

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Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 44557085 - 44556991
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtg--taaaaaacttaaacgacatttattttaaaa 93  Q
    |||| |||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||  |||||| ||||||||||||| |||||||||    
T  44557085 attaagataatttggtaaaataacatttctctttcttttaattaatgcattttttaatatgtgtataaaaaccttaaacgacattcattttaaaa 44556991  T

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Target: chr1; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 29568031 - 29568136
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaata--tgtgtaaaaaacttaaacgacatttattttaaaacagat 98  Q
    ||||| |||||||||||||||||||| |  |||||||||||||||||||||||||||||  |||||||||| ||||||||||||| ||||| |||| |||    
T  29568031 attagaataatttggtaaaataacatatttctttcttttaattaatgcatttcttaatatgtgtgtaaaaaccttaaacgacattcattttgaaacggat 29568130  T
Q  99 tgagta 104  Q
     |||||    
T  29568131 ggagta 29568136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 8895031 - 8894936
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatg--tgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||  | |||||| ||||||||||| | ||||||||||    
T  8895031 attaggataatttggtaaaataacatctctctttcttttaattaatgcatttcttaatatgtatataaaaatcttaaacgacactcattttaaaac 8894936  T

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Target: chr1; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 26595085 - 26594990
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||||||||||||||||||||||||| |  ||||||||||||||||| ||||||||||||  ||||||||| ||||||||||||| ||||| ||||    
T  26595085 attaggataatttggtaaaataacatctctctttcttttaattaatgtatttcttaatatgtgtgtaaaaaccttaaacgacattcattttgaaac 26594990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 104
Target Start/End: Complemental strand, 8989649 - 8989550
Alignment:
Q  7 ataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttattttaaaacagattgagta 104  Q
    |||||||||||||||||||| |  ||||||||||||||||||||||||||||||  |||||||||  |||| ||||||||||||||| || ||| |||||    
T  8989649 ataatttggtaaaataacatctttctttcttttaattaatgcatttcttaatatgtgtgtaaaaactttaatcgacatttattttaagacggatggagta 8989550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 18794558 - 18794463
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    ||||| |||||||||||||||||||| |  |||||||||||||||||||||| |||||||  |||||||||  |||||||||||| ||||||||||    
T  18794558 attagaataatttggtaaaataacatatttctttcttttaattaatgcatttattaatatgtgtgtaaaaatattaaacgacattcattttaaaac 18794463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 5114 - 5208
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttctt-aatatgtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||||||||||||||||||||||||| || |||||||| ||||||||||||| || ||| |||||||||| || ||| |||||| ||||||||||    
T  5114 attaggataatttggtaaaataacatctatctttctttaaattaatgcatttattaaatgtgtgtaaaaacctcaaatgacattcattttaaaac 5208  T

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Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 16757214 - 16757151
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt 64  Q
    ||||||||| ||||||||||||||||||  ||||||||||||||||| ||||||||||||||||    
T  16757214 attaggatagtttggtaaaataacatttctctttcttttaattaatgtatttcttaatatgtgt 16757151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 14593368 - 14593278
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||||||||||||||||||||  ||| |||| ||||||| | |||||||||||||||||||||||| || |||| ||| | ||||||||||    
T  14593368 aggataatttggtaaaataaccattatcttttttttaatcattgcatttcttaatatgtgtaaaaacctaaaacaacactcattttaaaac 14593278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 38947736 - 38947836
Alignment:
Q  8 taatttggtaaaataacatttacctttcttttaattaatgcatttcttaata--tgtgtaaaaaacttaaacgacatttattttaaaacagattgagtac 105  Q
    |||||||||||||||| || |  |||||||||||||| | ||||||||||||  ||||| ||||  ||||||||||||||||||||||| ||||||||||    
T  38947736 taatttggtaaaataatatctctctttcttttaatta-tacatttcttaataggtgtgtgaaaacattaaacgacatttattttaaaacggattgagtac 38947834  T
Q  106 tt 107  Q
    ||    
T  38947835 tt 38947836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 2610848 - 2610758
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgta-aaaaac-ttaaacgacatttattttaaaa 93  Q
    |||||||||| ||||||||||||||||||    | |||||||||||| ||||||||||||||||| |||||| |||||||||||| |||||||||    
T  2610848 attaggataacttggtaaaataacattta----ttttttaattaatgaatttcttaatatgtgtataaaaactttaaacgacattcattttaaaa 2610758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 25560888 - 25560781
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttctta--atatgtgtaaaaaacttaaacgacatttattttaaaacagat 98  Q
    |||| ||||||||||||||||||||| |  ||||||||||||||||| ||||||||  |||||||||||||   ||||||||||| ||||| ||| |||     
T  25560888 attatgataatttggtaaaataacatctctctttcttttaattaatgtatttcttaatatatgtgtaaaaactctaaacgacattcattttgaaatagag 25560789  T
Q  99 tgagtact 106  Q
     |||||||    
T  25560788 ggagtact 25560781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 7191222 - 7191165
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaat 58  Q
    |||||||||||||||||||||||||| |  |||||||||||||||| |||||||||||    
T  7191222 attaggataatttggtaaaataacatctctctttcttttaattaatacatttcttaat 7191165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 12484651 - 12484543
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttattttaaaacagattga 101  Q
    |||||||||||||||||| ||| ||| ||||||||||||   || ||||||||||||  ||||||||| |||||||| |||| |||||  ||||||  ||    
T  12484651 aggataatttggtaaaatgacaattatctttcttttaatctttgtatttcttaatatgtgtgtaaaaaccttaaacggcattcattttgtaacagaggga 12484552  T
Q  102 gtacttatt 110  Q
    |||||||||    
T  12484551 gtacttatt 12484543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 31699305 - 31699242
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt 64  Q
    |||| ||||||||||||||||||||| |  |||||||||||||||||  |||||||||||||||    
T  31699305 attatgataatttggtaaaataacatctctctttcttttaattaatgtgtttcttaatatgtgt 31699242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 93
Target Start/End: Original strand, 14607546 - 14607632
Alignment:
Q  7 ataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt--aaaaaacttaaacgacatttattttaaaa 93  Q
    |||||||||||||| |||| ||  ||||||||||||  ||||||||| ||||||||||  ||||| ||||||||| |||||||||||||    
T  14607546 ataatttggtaaaacaacaatt--ctttcttttaatccatgcatttcataatatgtgtgtaaaaatcttaaacgatatttattttaaaa 14607632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 14373436 - 14373344
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||||||||||||||||||||  ||   ||||||||||| | |||||||||||||||  ||||||| | || |||||||||| ||||||||||    
T  14373436 aggataatttggtaaaataaccattctttttcttttaatcattgcatttcttaatatgtgtgtaaacacctaaaacgacattcattttaaaac 14373344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 51244849 - 51244761
Alignment:
Q  3 taggataatttggtaaaataacatttacctttcttttaattaatgcatttctta--atatgtgtaaaaaacttaaacgacatttatttt 89  Q
    ||||||||||| |||||||||||| |  ||||||||||||||||  |||| |||  |||||||||||||  |||||| |||||||||||    
T  51244849 taggataatttagtaaaataacatatctctttcttttaattaatttattttttaatatatgtgtaaaaactttaaacaacatttatttt 51244761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 30293464 - 30293520
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat 60  Q
    |||||||||||||||||||||  ||| |||||||||||| | |||||||||||||||    
T  30293464 aggataatttggtaaaataaccattatctttcttttaatcattgcatttcttaatat 30293520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 50249438 - 50249498
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt 64  Q
    |||||||||||||||||||||  ||  |||||||||||| | |||||||||||||||||||    
T  50249438 aggataatttggtaaaataaccattctctttcttttaatcattgcatttcttaatatgtgt 50249498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 26352104 - 26352002
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttattttaaaacagattga 101  Q
    ||||||||||||||||||||   ||  |||||||||||| | |||||||||||||||  ||||||| | || |||||||| | |||||||||| ||| ||    
T  26352104 aggataatttggtaaaataaacattctctttcttttaataattgcatttcttaatatgtgtgtaaacacctaaaacgacactcattttaaaacggatgga 26352005  T
Q  102 gta 104  Q
    |||    
T  26352004 gta 26352002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 5225841 - 5225740
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgt--gtaaaaaacttaaacgacatttattttaaaacagat 98  Q
    |||| ||||||||||||||||||| |    || |||||||||||||  ||||||||||||||  ||||||| ||||||||| ||| ||||| |||| |||    
T  5225841 attatgataatttggtaaaataactt----ctctcttttaattaatatatttcttaatatgtgcgtaaaaaccttaaacgatattaattttgaaacggat 5225746  T
Q  99 tgagta 104  Q
     |||||    
T  5225745 agagta 5225740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 34032103 - 34032011
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatg--tgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||||||||||||||||||||  ||  |||||||||||| | ||||||| ||||||||  |||||| | || |||||||| | ||||||||||    
T  34032103 aggataatttggtaaaataaccattctctttcttttaatcattgcattttttaatatgtatgtaaacacctaaaacgacactcattttaaaac 34032011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 27209124 - 27209168
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaa 45  Q
    |||||||||||||||||||||||||| |  |||||||||||||||    
T  27209124 attaggataatttggtaaaataacatatctctttcttttaattaa 27209168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 28538340 - 28538392
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttc 53  Q
    |||| ||||||||||||||||||||| |  |||||||||||||||| ||||||    
T  28538340 attatgataatttggtaaaataacatctctctttcttttaattaatacatttc 28538392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 39125732 - 39125807
Alignment:
Q  5 ggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaata--tgtgtaaaaaacttaaacg 78  Q
    ||||||||| | ||||||||| ||  |||||||||||| | ||||||||||||||  |||||||||| ||||||||    
T  39125732 ggataatttagaaaaataacaattctctttcttttaatcattgcatttcttaatatgtgtgtaaaaaccttaaacg 39125807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 52023996 - 52023936
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt 64  Q
    ||||||||||||||||||||   ||  |||||||||||| | |||||||||||||||||||    
T  52023996 aggataatttggtaaaataatcattctctttcttttaatcattgcatttcttaatatgtgt 52023936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 34047254 - 34047164
Alignment:
Q  6 gataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    ||||||||||||||||||   ||  |||||||||||| | |||||||||||||||  ||||||| | || |||||||| | ||||||||||    
T  34047254 gataatttggtaaaataatcattctctttcttttaatcattgcatttcttaatatgtgtgtaaacacctaaaacgacactcattttaaaac 34047164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 33694438 - 33694388
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatt 51  Q
    ||||| |||||||||||||||||||| |  |||| ||||||||||||||||    
T  33694438 attagaataatttggtaaaataacatatctctttattttaattaatgcatt 33694388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 11799599 - 11799691
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgtaaaaaa--cttaaacgacatttattttaaaac 94  Q
    |||||| | ||||||||||||| ||  |||||||||||  | ||  ||||||||||||||| | |||  ||||||||||||| ||||||||||    
T  11799599 aggatagtgtggtaaaataacaattctctttcttttaaacattgtttttcttaatatgtgttataaaatcttaaacgacattcattttaaaac 11799691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 12124608 - 12124564
Alignment:
Q  48 catttcttaatatgtgtaaaaaacttaaacgacatttattttaaaa 93  Q
    ||||||||||||||||| |||| ||||||||||| |||||||||||    
T  12124608 catttcttaatatgtgt-aaaaccttaaacgacacttattttaaaa 12124564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 49900772 - 49900715
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaat 58  Q
    ||||||||||||| ||||||||| || |  ||||||| |||||||| |||||||||||    
T  49900772 attaggataatttagtaaaataatatatttctttcttctaattaatacatttcttaat 49900715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 12591105 - 12591045
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt 64  Q
    ||||||||||||||||||||   ||| |||||||||||| | ||||| |||||| ||||||    
T  12591105 aggataatttggtaaaataatcattatctttcttttaatcattgcatatcttaacatgtgt 12591045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 44257704 - 44257644
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt 64  Q
    ||||||||||||||||||||   ||  |||||||||||| | ||||||| |||||||||||    
T  44257704 aggataatttggtaaaataattattctctttcttttaatcattgcatttattaatatgtgt 44257644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 8e-24; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 44651023 - 44651118
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtg--taaaaaacttaaacgacatttattttaaaac 94  Q
    |||| ||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||  |||||| ||||||||| ||||||||| ||||    
T  44651023 attatgataatttggtaaaataacatatatctttcttttaattaatgcatttctaaatatgtgtataaaaatcttaaacgatatttattttgaaac 44651118  T

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Target: chr4; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 47817874 - 47817969
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtg--taaaaaacttaaacgacatttattttaaaac 94  Q
    |||| ||||| ||||||||||||||| |  |||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||| ||||    
T  47817874 attatgataaattggtaaaataacatctctctttcttttaattaatgcatttcttaatatgtgtataaaaaacttaaacgacattcattttgaaac 47817969  T

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Target: chr4; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 45839773 - 45839865
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||||||||||||||||||||||  |||  |||||||||||| ||||||||||||||| ||||||||||  |||||||||||| ||||||||||    
T  45839773 attaggataatttggtaaaataatttttctctttcttttaat-aatgcatttcttaatttgtgtaaaaactttaaacgacattcattttaaaac 45839865  T

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Target: chr4; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 36558318 - 36558228
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||||||||||||||||||| | ||| |||||||||||| | ||||||||||||| |||||||||| |||||||||| || ||||| ||||    
T  36558318 aggataatttggtaaaataaaaattatctttcttttaatcattgcatttcttaatgtgtgtaaaaaccttaaacgaccttcattttgaaac 36558228  T

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Target: chr4; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 44061129 - 44061234
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaata--tgtgtaaaaaacttaaacgacatttattttaaaacagat 98  Q
    |||| |||||||| |||||||||||| ||  ||||| ||||||||||||||||||||||  ||| |||||| ||||||||||||| |||||||||| |||    
T  44061129 attatgataatttagtaaaataacatctatttttctcttaattaatgcatttcttaatacgtgtataaaaaccttaaacgacattcattttaaaacggat 44061228  T
Q  99 tgagta 104  Q
     |||||    
T  44061229 ggagta 44061234  T

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Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 11364361 - 11364430
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgtaaaaaa 70  Q
    |||| ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| ||||    
T  11364361 attaagataatttggtaaaataacatatccctttcttttaattaatgcattttttaatatgtgtataaaa 11364430  T

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Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 34413568 - 34413473
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgta-aaaaac-ttaaacgacatttattttaaaac 94  Q
    ||||| ||||||| ||||||||||||||  ||||||||||||||| |||||||||||| |||||| |||||| ||||||||| || ||||||||||    
T  34413568 attagcataatttagtaaaataacatttctctttcttttaattaacgcatttcttaatttgtgtataaaaacattaaacgacgttcattttaaaac 34413473  T

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Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 41496340 - 41496434
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaata--tgtgtaaaaaacttaaacgacatttattttaaaa 93  Q
    |||||||||||||||| |||||||||||   ||||||||||||||| ||||| ||||||  |||||||||| ||||||||| ||| |||||||||    
T  41496340 attaggataatttggtgaaataacatttctatttcttttaattaatacattttttaatatgtgtgtaaaaaccttaaacgatattcattttaaaa 41496434  T

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Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 47458408 - 47458315
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttattttaaaa 93  Q
    |||||||||||||||||||||||||| |  ||||||||||||||||| |||| |||||||  ||||||||| ||| ||||| |||||||||||||    
T  47458408 attaggataatttggtaaaataacatctgtctttcttttaattaatgtattttttaatatgtgtgtaaaaatctt-aacgatatttattttaaaa 47458315  T

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Target: chr4; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 6991282 - 6991189
Alignment:
Q  3 taggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtg--taaaaaacttaaacgacatttattttaaaac 94  Q
    ||||||||||||||| ||||| || |  |||||||||||||||||||||||||||||||||  |||||| ||| ||||| ||| ||||||||||    
T  6991282 taggataatttggtataataaaatatctctttcttttaattaatgcatttcttaatatgtgtataaaaaccttgaacgaaattcattttaaaac 6991189  T

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Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 19451226 - 19451131
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||||| || |||||||||||||||| |  ||||||||||||||||||||||||||||||  |||||||||  |||||| ||||| ||||| ||||    
T  19451226 attaggctattttggtaaaataacatctctctttcttttaattaatgcatttcttaatatgtgtgtaaaaactttaaacaacattcattttgaaac 19451131  T

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Target: chr4; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 10573176 - 10573082
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgca-tttcttaata--tgtgtaaaaaacttaaacgacatttattttaaa 92  Q
    |||||||||||||||||||||||||| |  ||||||||||| ||||| | ||| ||||||  |||||||||| ||||||||||||| ||||||||    
T  10573176 attaggataatttggtaaaataacatctctctttcttttaaataatgtatttttttaatatgtgtgtaaaaatcttaaacgacattcattttaaa 10573082  T

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Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 7906025 - 7905933
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||||||||||||||||||||| ||  |||||||||||| | |||||||||||||||  ||||||| | || |||||||| | ||||||||||    
T  7906025 aggataatttggtaaaataacaattctctttcttttaatcattgcatttcttaatatgtgtgtaaacacctaaaacgacactcattttaaaac 7905933  T

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Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 30261400 - 30261492
Alignment:
Q  7 ataatttggtaaaataacatttacctttcttttaattaatgcatttcttaata--tgtgtaaaaaacttaaacgacatttattttaaaacaga 97  Q
    |||||||||||||||||||| |  |||||||| |||||||| |||||||||||  ||||||||||  |||||||| ||| ||||| |||||||    
T  30261400 ataatttggtaaaataacatctctctttctttaaattaatgtatttcttaatatgtgtgtaaaaactttaaacgatattcattttgaaacaga 30261492  T

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Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 93
Target Start/End: Complemental strand, 26934450 - 26934403
Alignment:
Q  46 tgcatttcttaatatgtgtaaaaaacttaaacgacatttattttaaaa 93  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||    
T  26934450 tgcatttcttaatatgtgtagaaaacttaaacgacattcattttaaaa 26934403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 51733520 - 51733432
Alignment:
Q  7 ataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtg-taaaaaacttaaacgacatttattttaaaac 94  Q
    ||||||||||||||||||  ||  |||||||||||| | |||||||||||||||||| |||| | || |||||||||| ||||| ||||    
T  51733520 ataatttggtaaaataaccattctctttcttttaatcattgcatttcttaatatgtgttaaacacctaaaacgacattcattttgaaac 51733432  T

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Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 56460221 - 56460309
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgtaaaaaacttaaacgacatttatttt 89  Q
    ||||| ||||||| ||||||||| || |  ||||||||||||||||| |||||||||  | ||||||||| ||||| |||||| |||||    
T  56460221 attagaataatttagtaaaataatatatctctttcttttaattaatgtatttcttaacgtatgtaaaaaatttaaatgacattcatttt 56460309  T

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Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 37624684 - 37624786
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttattttaaaacagattga 101  Q
    ||||||||||||||||||||   ||  |||||||||||| | |||||||||||||||  ||||||| | || |||||||| | |||||||||| ||| ||    
T  37624684 aggataatttggtaaaataatcattctctttcttttaatcattgcatttcttaatatgagtgtaaacacctaaaacgacactcattttaaaacggatgga 37624783  T
Q  102 gta 104  Q
    |||    
T  37624784 gta 37624786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 50203209 - 50203299
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgt--gtaaaaaacttaaacgacatttatttt 89  Q
    |||| ||||||||||| ||||||||| |  ||||||||||| |||  |||||||||||||||  ||||||| ||||||| ||||| |||||    
T  50203209 attatgataatttggtgaaataacatatttctttcttttaactaacacatttcttaatatgtgcgtaaaaaccttaaacaacattcatttt 50203299  T

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Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 4505464 - 4505522
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgt 62  Q
    |||||||||||||||||||||  ||  |||||||||||| | |||||||||||||||||    
T  4505464 aggataatttggtaaaataaccattctctttcttttaatcattgcatttcttaatatgt 4505522  T

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Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 30780041 - 30779952
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt-aaaaaacttaaacgacatttattttaaaac 94  Q
    ||||||||||||| ||||||||||||||     | ||||||||||| |||||| ||||||||||  |||| |||||| |||| ||||||||||||    
T  30780041 attaggataatttagtaaaataacattt-----ttttttaattaattcatttcctaatatgtgtgtaaaatcttaaatgacacttattttaaaac 30779952  T

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Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 620191 - 620107
Alignment:
Q  7 ataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttatttt 89  Q
    |||||||||||||||||||| |  | |||||||||| |||  |||| |||||||  ||||||||| ||||||||||| |||||||    
T  620191 ataatttggtaaaataacatctctccttcttttaataaatatattttttaatatatgtgtaaaaaccttaaacgacaattatttt 620107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 18052706 - 18052616
Alignment:
Q  2 ttaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||||||||||| |||| ||||||| |  ||||||||||||||||| ||||||||||||  || ||||  |||||| ||||| ||||| ||||    
T  18052706 ttaggataatttagtaagataacatct--ctttcttttaattaatgtatttcttaatataagtgaaaactttaaactacattcattttgaaac 18052616  T

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Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 28308857 - 28308910
Alignment:
Q  7 ataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat 60  Q
    |||||||| |||||||| ||||| |||||||||||| | |||||||||||||||    
T  28308857 ataatttgataaaataatatttatctttcttttaatcattgcatttcttaatat 28308910  T

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Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 44868273 - 44868194
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacga 79  Q
    ||||||| ||||||||||||||||| || | ||| |||||||||||  ||||||||||||  ||||||||| |||||||||    
T  44868273 attaggacaatttggtaaaataacaatt-ctttttttttaattaatatatttcttaatatgtgtgtaaaaaccttaaacga 44868194  T

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Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 46392084 - 46392028
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaat 58  Q
    ||||||||||||||||||||| ||||||   |||||||| ||||||||||||||||||    
T  46392084 attaggataatttggtaaaattacatttctttttctttt-attaatgcatttcttaat 46392028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 22220388 - 22220328
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt 64  Q
    |||||||||||||||||||||  ||  | |||||||||| | |||||||||||||||||||    
T  22220388 aggataatttggtaaaataaccattctcattcttttaatcattgcatttcttaatatgtgt 22220328  T

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Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 104
Target Start/End: Complemental strand, 38510271 - 38510172
Alignment:
Q  7 ataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttattttaaaacagattgagta 104  Q
    |||||||||||||||||| |||   ||||||||||| | ||||||| |||||||  ||||||| | || |||||||| | |||||||||| ||| |||||    
T  38510271 ataatttggtaaaataacctttctttttcttttaatcattgcattttttaatatgtgtgtaaagatctaaaacgacactcattttaaaacggatggagta 38510172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 52162239 - 52162298
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat 60  Q
    |||| ||||||||||||||||||||| |    ||||||||| ||||||||||||||||||    
T  52162239 attaagataatttggtaaaataacatctctagttcttttaactaatgcatttcttaatat 52162298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 36844757 - 36844662
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtg--taaaaaacttaaacgacatttattttaaaac 94  Q
    ||||||||||||||||||||||| || |  |||||| ||||||||||||||||||||||||||  |||||| ||||||||||||| ||||| ||||    
T  36844757 attaggataatttggtaaaataatatctctctttctgttaattaatgcatttcttaatatgtgtctaaaaaccttaaacgacattcattttgaaac 36844662  T

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Target: chr3; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 3985989 - 3986079
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||||||||||||||||||| | ||  |||||||||||| | ||||||||||||| |||||||||| ||||||||||||| ||||| ||||    
T  3985989 aggataatttggtaaaataaaaattctctttcttttaatcattgcatttcttaatgtgtgtaaaaaccttaaacgacattcattttgaaac 3986079  T

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Target: chr3; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 27067741 - 27067829
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    ||||||||||||||||||| ||||||    |||| ||||||||||||||||||||||| |||||||||| ||||||||||| | ||||||||||    
T  27067741 attaggataatttggtaaattaacat----cttt-ttttaattaatgcatttcttaatgtgtgtaaaaaccttaaacgacactcattttaaaac 27067829  T

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Target: chr3; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 30315445 - 30315540
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaata--tgtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||||||||||||||||||||||||| |  |||||| ||||||||||||||||||||||  ||||||| |  ||||||||||||| ||||| ||||    
T  30315445 attaggataatttggtaaaataacatctctctttctcttaattaatgcatttcttaatatgtgtgtaacagccttaaacgacattcattttgaaac 30315540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 31 - 94
Target Start/End: Original strand, 48901872 - 48901937
Alignment:
Q  31 ctttcttttaattaatgcatttcttaatatg--tgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||| | ||||||||||    
T  48901872 ctttcttttaattaatgcatttcttaatatgtatgtaaaaaacttaaacgacactcattttaaaac 48901937  T

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Target: chr3; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 48903427 - 48903516
Alignment:
Q  7 ataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatg--tgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||||||| |||||||| || |  |||||||||||||||||||||||||||||||  |||||||||||||||||||| | |||| |||||    
T  48903427 ataatttgataaaataatatatctctttcttttaattaatgcatttcttaatatgtatgtaaaaaacttaaacgacactcatttaaaaac 48903516  T

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Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 8817276 - 8817371
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttctta--atatgtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    ||||| |||||||| ||||||||| | |  |||||||||||||||| |||||||||  |||| |||||||| |||||| |||| ||||||||||||    
T  8817276 attagaataatttgataaaataacgtctctctttcttttaattaatacatttcttaatatatttgtaaaaaccttaaaagacacttattttaaaac 8817371  T

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Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 7230909 - 7230815
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttattttaaaa 93  Q
    |||||||||||||  ||||||| ||| |  |||| |||| |||||| |||||||||||||  ||||||||| ||||||||||||| |||||||||    
T  7230909 attaggataatttactaaaatatcatctctctttatttttattaattcatttcttaatatgtgtgtaaaaatcttaaacgacattcattttaaaa 7230815  T

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Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 40487969 - 40488024
Alignment:
Q  7 ataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgt 62  Q
    |||||||| ||||||||||| | |||||||||||||||||| ||||||||||||||    
T  40487969 ataatttgataaaataacatcttcctttcttttaattaatgtatttcttaatatgt 40488024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 50646155 - 50646061
Alignment:
Q  2 ttaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    ||||||||||||| |  |||||||| |  |||||||||||||||| ||||| |||||||  ||||||||| ||||||||||| | ||||||||||    
T  50646155 ttaggataatttgatcgaataacatctctctttcttttaattaatacattttttaatatgtgtgtaaaaatcttaaacgacactcattttaaaac 50646061  T

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Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 19115514 - 19115603
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgtaaaaaacttaaacgacatttattttaaaa 93  Q
    |||||||||||||||||||||  ||   ||||||||||| | |||||||||||||||||||||| | || |||| ||| | |||||||||    
T  19115514 aggataatttggtaaaataaccattctttttcttttaatcattgcatttcttaatatgtgtaaacacctaaaacaacactcattttaaaa 19115603  T

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Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 38141085 - 38141181
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttctta--atatgtgtaaaaaacttaaacgacatttattttaaaaca 95  Q
    ||||| |||||||||||||||||||| |   ||||||||||||||| ||||| |||  |||| ||||||||  ||| |||||||| |||||||||||    
T  38141085 attagaataatttggtaaaataacatctctatttcttttaattaatacattttttaatatatatgtaaaaactttatacgacattcattttaaaaca 38141181  T

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Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 42886877 - 42886969
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatg--tgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||||||||||||||||||||| ||  |||||||||||| | |||| |||||||||||  |||||| | || |||||||| | ||||||||||    
T  42886877 aggataatttggtaaaataacaattctctttcttttaatcattgcagttcttaatatgtttgtaaacacctaaaacgacactcattttaaaac 42886969  T

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Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 47823431 - 47823338
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtg--taaaaaacttaaacgacatttattttaaaac 94  Q
    |||||||| ||||||| ||||||||| |  |||||||||||||||| ||||| ||||||||||  |||||| ||||||| || || ||||||||||    
T  47823431 attaggattatttggttaaataacatct--ctttcttttaattaatacattttttaatatgtgtataaaaaccttaaacaacgttcattttaaaac 47823338  T

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Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 21205583 - 21205631
Alignment:
Q  46 tgcatttcttaatatgtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||||||||||||||||||||||| ||||||||||| | ||||||||||    
T  21205583 tgcatttcttaatatgtgtaaaaatcttaaacgacactcattttaaaac 21205631  T

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Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 42072120 - 42072215
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaata--tgtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||| |||||||| |||||||||||| |  ||||||||||||||||  |||||||||||  ||||||||||  ||| |||||||| ||||| ||||    
T  42072120 attatgataatttagtaaaataacatatctctttcttttaattaatatatttcttaatatgtgtgtaaaaacattatacgacattcattttgaaac 42072215  T

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Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 11337633 - 11337547
Alignment:
Q  5 ggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaata--tgtgtaaaaaacttaaacgacatttatttt 89  Q
    ||||||||||||||||| ||  || |||||||| |||| | |||||||| |||||  |||||||||| ||||||||||||| |||||    
T  11337633 ggataatttggtaaaattactattccctttcttctaatcattgcatttcataatatgtgtgtaaaaaccttaaacgacattcatttt 11337547  T

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Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 19373721 - 19373784
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt 64  Q
    ||||||| |||||||||||||||||| |  ||||||||||| |||||||| ||||||| |||||    
T  19373721 attaggagaatttggtaaaataacatctctctttcttttaactaatgcatctcttaatctgtgt 19373784  T

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Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 22857221 - 22857295
Alignment:
Q  31 ctttcttttaattaatgcatttcttaata--tgtgtaaaaaacttaaacgacatttattttaaaacagattgagt 103  Q
    |||||||||||||||||||||| ||||||  ||||||||||  ||||| |||||||||||| |||| ||| ||||    
T  22857221 ctttcttttaattaatgcattttttaatatgtgtgtaaaaactttaaatgacatttattttgaaacggatagagt 22857295  T

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Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 30934824 - 30934728
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt---aaaaaacttaaacgacatttattttaaaac 94  Q
    |||| ||||||||| ||||||||||| |  ||||||||||| ||||| |||||| || ||||||    ||||| |||||||| ||||||||||||||    
T  30934824 attatgataatttgataaaataacatctctctttcttttaactaatgtatttctcaacatgtgtgtagaaaaatttaaacgatatttattttaaaac 30934728  T

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Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 31190649 - 31190706
Alignment:
Q  39 taattaatgcatttcttaatatgt--gtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||||||| |||||||||||||||  ||||||| ||||||||||||| ||||||||||    
T  31190649 taattaatacatttcttaatatgtatgtaaaaaccttaaacgacattcattttaaaac 31190706  T

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Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 50038193 - 50038099
Alignment:
Q  4 aggataatttggtaaaataa-catttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttattttaaaacaga 97  Q
    |||||||||||||||||||| ||||  |  |||||||||| | |||||||||||||||  ||||||| | || |||||||| |||||||||||||||    
T  50038193 aggataatttggtaaaataatcattctc--ttcttttaatcattgcatttcttaatatgtgtgtaaacacctaaaacgacacttattttaaaacaga 50038099  T

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Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 4392619 - 4392709
Alignment:
Q  2 ttaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||||||||||| |||| ||||||| |  ||||||||||||||||| ||||||||||||  || ||||  |||||| ||||| ||||| ||||    
T  4392619 ttaggataatttagtaagataacatct--ctttcttttaattaatgtatttcttaatataagtgaaaactttaaactacattcattttgaaac 4392709  T

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Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 4759418 - 4759479
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgta 65  Q
    |||||||||||||||||||||  ||  |||||||||||| | ||| ||||||||||||||||    
T  4759418 aggataatttggtaaaataaccattcgctttcttttaatcattgcttttcttaatatgtgta 4759479  T

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Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 9189450 - 9189355
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaata---tgtgtaaaaaacttaaacgacatttattttaaaa 93  Q
    |||| ||| ||||||||||||||||| |   ||| ||||||||||||||||| ||||||   ||||||||||  ||||||  ||||||||||||||    
T  9189450 attacgatgatttggtaaaataacatctctttttattttaattaatgcattttttaatatgttgtgtaaaaattttaaacagcatttattttaaaa 9189355  T

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Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 44064477 - 44064417
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt 64  Q
    ||||||||||||||||||||   ||  |||||||||||| | |||||||||||||||||||    
T  44064477 aggataatttggtaaaataatcattctctttcttttaatcattgcatttcttaatatgtgt 44064417  T

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Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 45460794 - 45460883
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaata----tgtgtaaaaaacttaaacgacatttatttt 89  Q
    |||||||||||||||||||||| ||   |||||||||||   ||||||||||||||    |||||||||| |||||||||| || |||||    
T  45460794 aggataatttggtaaaataacaattttatttcttttaatctttgcatttcttaatacatgtgtgtaaaaatcttaaacgacgttcatttt 45460883  T

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Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 11017078 - 11017014
Alignment:
Q  32 tttcttttaattaatgcatttcttaatatgtgt--aaaaaac-ttaaacgacatttattttaaaa 93  Q
    ||||||||||||||||||||| ||||||||| |  ||||||| ||||| |||||| |||||||||    
T  11017078 tttcttttaattaatgcatttattaatatgtatagaaaaaacattaaaagacattcattttaaaa 11017014  T

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Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 97
Target Start/End: Original strand, 20997461 - 20997498
Alignment:
Q  60 tgtgtaaaaaacttaaacgacatttattttaaaacaga 97  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  20997461 tgtgtaaaaatcttaaacgacatttatattaaaacaga 20997498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 30680832 - 30680740
Alignment:
Q  7 ataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgt--gtaaaaaacttaaacgacatttattttaaaacaga 97  Q
    |||||||||||||||||||| |   ||||||||||| ||| ||||| |||||||||  |||||||  ||||||||  | |||||| |||||||    
T  30680832 ataatttggtaaaataacatctctttttcttttaatcaatacattttttaatatgtacgtaaaaactttaaacgaggtatattttcaaacaga 30680740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 40717354 - 40717306
Alignment:
Q  34 tcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgac 80  Q
    ||||| |||||||||||||||||||||  ||||||||| ||||||||||    
T  40717354 tctttaaattaatgcatttcttaatatgtgtgtaaaaaccttaaacgac 40717306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 54403288 - 54403215
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgtaaaaaacttaaac 77  Q
    |||||||||| ||||||||||| ||| |||| ||||| ||  |  |||||||||| |||||||||| |||||||    
T  54403288 aggataatttagtaaaataacaattatctttgttttagtttttatatttcttaatgtgtgtaaaaatcttaaac 54403215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 42571551 - 42571491
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt 64  Q
    ||||||||||| |||||||||  ||  || ||||||||| | |||||||||||||||||||    
T  42571551 aggataatttgataaaataaccattctctatcttttaatcattgcatttcttaatatgtgt 42571491  T

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Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 37038787 - 37038692
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||||||||||||||||||||||||| |  ||||||||||||||||| ||||||||||||  ||||||||| ||||||||||| | ||||| ||||    
T  37038787 attaggataatttggtaaaataacatctctctttcttttaattaatgtatttcttaatatgtgtgtaaaaatcttaaacgacactcattttgaaac 37038692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 29412119 - 29412209
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttatttt 89  Q
    |||||||||||||||||||||||| | |  ||| ||||||||||||||||||||||||||  ||||||||| ||||||||||||| |||||    
T  29412119 attaggataatttggtaaaataacttatctcttccttttaattaatgcatttcttaatatacgtgtaaaaaccttaaacgacattaatttt 29412209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 8540174 - 8540269
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaata--tgtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||||||||||||| ||||||||||| |   ||||||||||||||||||||||||||||  |||||||||| ||||||| | ||| ||||||||||    
T  8540174 attaggataatttgataaaataacatctctttttcttttaattaatgcatttcttaatatgtgtgtaaaaatcttaaactatattcattttaaaac 8540269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 10195810 - 10195903
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaat--atgtgtaaaaaacttaaacgacatttattttaaa 92  Q
    |||||||||||||||||||||||||| |  |||||||||||||||| |||| ||||||  || |||||||| ||||||||||| | ||||||||    
T  10195810 attaggataatttggtaaaataacatctctctttcttttaattaatacattccttaataaatatgtaaaaaccttaaacgacactcattttaaa 10195903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 33056026 - 33056131
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaata--tgtgtaaaaaacttaaacgacatttattttaaaacagat 98  Q
    |||| ||||||||||||||||||||| |  |||||||||||||||  ||||| ||||||  |||||||||  ||||||||||||| |||||||||| |||    
T  33056026 attatgataatttggtaaaataacatctctctttcttttaattaagacattttttaatatgtgtgtaaaattcttaaacgacattcattttaaaacggat 33056125  T
Q  99 tgagta 104  Q
     |||||    
T  33056126 ggagta 33056131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 11188267 - 11188172
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||||||||| ||||||||||||||| |  ||||||||| |||||||||||| |||||||  |||||| || ||||||||||||| ||||| ||||    
T  11188267 attaggataacttggtaaaataacatctctctttcttttgattaatgcatttattaatatgtgtgtaagaaccttaaacgacattcattttgaaac 11188172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 14833773 - 14833687
Alignment:
Q  5 ggataatttggtaaaataacatttacctttcttttaattaatgcatttctta--atatgtgtaaaaaa-cttaaacgacatttattt 88  Q
    |||||||||||||||||||||||||  ||| |||||||| ||||||||||||  |||| ||||||||| ||||||||||||| ||||    
T  14833773 ggataatttggtaaaataacatttatatttattttaattgatgcatttcttaatatatatgtaaaaaaccttaaacgacattcattt 14833687  T

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Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 4658249 - 4658168
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt-aaaaaacttaaacgaca 81  Q
    ||||||| |||||||||||||||||| |  |||| ||||||||||| ||||| |||||||||||  ||||||||||||||||    
T  4658249 attaggacaatttggtaaaataacatctttctttattttaattaatacattttttaatatgtgtgtaaaaacttaaacgaca 4658168  T

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Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 15083182 - 15083081
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttctta--atatgtgtaaaaaacttaaacgacatttattttaaaacagat 98  Q
    |||| |||||||||||||||||||||    |||||||||||||||||||||| |||  |||||||||||||  |||||  ||||| |||||||||| |||    
T  15083182 attatgataatttggtaaaataacat----ctttcttttaattaatgcatttattaatatatgtgtaaaaactttaaataacattcattttaaaacggat 15083087  T
Q  99 tgagta 104  Q
     |||||    
T  15083086 ggagta 15083081  T

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Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 27964236 - 27964175
Alignment:
Q  7 ataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgtaaaa 68  Q
    |||||||||||||||||||| |  ||||||||||||||||||||||||| || |||||||||    
T  27964236 ataatttggtaaaataacatctttctttcttttaattaatgcatttctttatgtgtgtaaaa 27964175  T

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Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 44712251 - 44712167
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatt 83  Q
    ||||||||||||||||||||| |||| |  ||||||||||||||||| |||| |||||||  ||||||||| |||||||| ||||    
T  44712251 attaggataatttggtaaaattacatctttctttcttttaattaatgtattttttaatatgtgtgtaaaaatcttaaacggcatt 44712167  T

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Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 4469591 - 4469654
Alignment:
Q  11 tttggtaaaataacatttacctttcttttaattaatgcatttctta-atatgtgtaaaaaactt 73  Q
    |||||||||||||||| |  |||||||||||||||||||||||||| || ||||||||||||||    
T  4469591 tttggtaaaataacatctctctttcttttaattaatgcatttcttatatgtgtgtaaaaaactt 4469654  T

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Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 9391611 - 9391505
Alignment:
Q  1 attaggataatttggtaaaataacat-ttacctttcttttaattaatgcatttcttaata--tgtgtaaaaaacttaaacgacatttattttaaaacaga 97  Q
    |||||||||||||||||||||||||| |    ||| ||||||||||| ||||| ||||||  |||||||||| |||||| |||||||||||| |||| ||    
T  9391611 attaggataatttggtaaaataacatatctttttttttttaattaatacattttttaatatgtgtgtaaaaatcttaaatgacatttattttgaaactga 9391512  T
Q  98 ttgagta 104  Q
    | |||||    
T  9391511 tggagta 9391505  T

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Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 19164495 - 19164573
Alignment:
Q  7 ataatttggtaaaataacatttacctttcttttaattaatgcatttctta--atatgtgtaaaaaacttaaacgacatt 83  Q
    |||||||||||||||||||| |  ||||||||||||||||  ||||||||  ||||||||||||| ||||||| |||||    
T  19164495 ataatttggtaaaataacatatctctttcttttaattaataaatttcttaatatatgtgtaaaaaccttaaacaacatt 19164573  T

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Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 43971941 - 43972009
Alignment:
Q  31 ctttcttttaattaatgcatttcttaata--tgtgtaaaaaacttaaacgacatttattttaaaacaga 97  Q
    ||||||||| |||||||||||||||||||  |||||||||| |||| |||||||| ||||| |||||||    
T  43971941 ctttcttttgattaatgcatttcttaatatgtgtgtaaaaaccttagacgacattcattttgaaacaga 43972009  T

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Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 7872788 - 7872701
Alignment:
Q  7 ataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    ||||||||||||||||| || |  ||||||||||||||||| |||| |||||||  ||||||||| | ||||| ||||| ||||||||||    
T  7872788 ataatttggtaaaataatatct--ctttcttttaattaatgaattttttaatatgtgtgtaaaaaccataaacaacattcattttaaaac 7872701  T

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Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 11132715 - 11132773
Alignment:
Q  32 tttcttttaattaatgcatttcttaatatgt--gtaaaaaacttaaacgacatttattt 88  Q
    |||||||||||||||||||||||||||||||  |||||||  |||||||||| ||||||    
T  11132715 tttcttttaattaatgcatttcttaatatgtgcgtaaaaactttaaacgacaattattt 11132773  T

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Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 27726389 - 27726327
Alignment:
Q  33 ttcttttaattaatgcatttcttaatat--gtgtaaaaaacttaaacgacatttattttaaaa 93  Q
    ||||||||||||||||||||| ||||||  ||||||||| | |||| ||||||||||||||||    
T  27726389 ttcttttaattaatgcatttcataatatatgtgtaaaaatcataaatgacatttattttaaaa 27726327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 36685759 - 36685670
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaata--tgtgtaaaaaacttaaacgacatttatttt 89  Q
    |||||||||||||||||||||||||| | | ||| |||||||||||  |||| ||||||  |||||| ||| ||||||||||||| |||||    
T  36685759 attaggataatttggtaaaataacatat-ctttttttttaattaatatatttattaatatgtgtgtataaaccttaaacgacattcatttt 36685670  T

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Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 12565452 - 12565393
Alignment:
Q  37 tttaattaatgcatttcttaatatgtgt--aaaaaacttaaacgacatttattttaaaac 94  Q
    ||||||||| |||||| |||||||||||  ||||| ||||||||||||| ||||||||||    
T  12565452 tttaattaacgcatttattaatatgtgtgtaaaaaccttaaacgacattcattttaaaac 12565393  T

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Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 27986166 - 27986226
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt 64  Q
    |||||||||||||||||||||  ||  |||| ||||||| | |||||||||||||||||||    
T  27986166 aggataatttggtaaaataaccattctctttattttaataattgcatttcttaatatgtgt 27986226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 28072698 - 28072758
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt 64  Q
    |||||||||||||||||||||  ||  |||| ||||||| | |||||||||||||||||||    
T  28072698 aggataatttggtaaaataaccattctctttattttaataattgcatttcttaatatgtgt 28072758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 45423746 - 45423837
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt--aaaaaacttaaacgacatttattttaaaa 93  Q
    |||||||||||||||||||| | ||   ||| ||||||| | | |||||||||||||||||  |||||  |||||||||||| |||||||||    
T  45423746 aggataatttggtaaaataataattctatttattttaatcatttcatttcttaatatgtgtgtaaaaattttaaacgacattcattttaaaa 45423837  T

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Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 40608623 - 40608519
Alignment:
Q  1 attaggataatttggtaaaata--acatttacctttcttttaattaatgcatttctta--atatgtgtaaaaaacttaaacgacatttattttaaaacag 96  Q
    ||||||||||||||||||||||  ||||||   ||||||||||||||||  ||| |||  |||||| |||||| ||||||| ||||| |||||| ||| |    
T  40608623 attaggataatttggtaaaataatacattt---tttcttttaattaatgtgtttattaatatatgtataaaaatcttaaacaacattcattttacaacgg 40608527  T
Q  97 attgagta 104  Q
    || |||||    
T  40608526 atggagta 40608519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 94
Target Start/End: Original strand, 7644725 - 7644792
Alignment:
Q  31 ctttcttttaattaatgcatttcttaatatg----tgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||||||||||||||| |||||||||||||     |||||||| ||||||||||| | ||||||||||    
T  7644725 ctttcttttaattaatacatttcttaatatacatatgtaaaaaccttaaacgacactcattttaaaac 7644792  T

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Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 16792614 - 16792705
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaat--atgtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    ||||||||||||||||||||   ||| ||||||| |||| | |||||||||||||  ||||||||| | || |||| ||||| ||||||||||    
T  16792614 aggataatttggtaaaataagcattatctttcttataataattgcatttcttaatacatgtgtaaacacctaaaac-acattcattttaaaac 16792705  T

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Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 34455827 - 34455884
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaat 58  Q
    |||||||||||||||||||| ||||| |  |||||||||||| |||| |||| |||||    
T  34455827 attaggataatttggtaaaagaacatctctctttcttttaatcaatgaattttttaat 34455884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 22620359 - 22620299
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt 64  Q
    |||||||||| ||||||||||  ||  |||||||||||| | ||||||| |||||||||||    
T  22620359 aggataatttagtaaaataaccattctctttcttttaatcattgcattttttaatatgtgt 22620299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 43427312 - 43427253
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt 64  Q
    |||||||||||||||||||||  ||  |||| |||||| || |||||||||||||||||||    
T  43427312 aggataatttggtaaaataaccattctctttattttaa-tattgcatttcttaatatgtgt 43427253  T

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Target: scaffold0565 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 9972 - 9874
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttctta--atatgtgtaaaaaacttaaacgacatttattttaaaacaga 97  Q
    |||| ||||||||||||||||||||| |   ||||||||||||||||||||| |||  |||||||||||||  |||||||||||| ||||| |||||||    
T  9972 attaagataatttggtaaaataacatctttttttcttttaattaatgcattttttaatatatgtgtaaaaactttaaacgacattcattttgaaacaga 9874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 4700 - 4793
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt--aaaaaacttaaacgacatttattttaaaac 94  Q
    ||||||||| |||||||||||||||| |   ||| ||||| |||||||||||||||||||||||  |||||  |||||||||||||||||||||||    
T  4700 attaggatagtttggtaaaataacatctt--ttttttttagttaatgcatttcttaatatgtgtgtaaaaattttaaacgacatttattttaaaac 4793  T

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Target: scaffold0136 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 9680 - 9777
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaatatgtgt--aaaaaacttaaacgacatttattttaaaacagat 98  Q
    ||||||||||||| |||||||||||| ||   || |||||||||||| ||||||||||||||||  ||||| |||||||||||||||| || |||| |||    
T  9680 attaggataatttagtaaaataacatcta---tttttttaattaatgtatttcttaatatgtgtgcaaaaaccttaaacgacatttatcttgaaactgat 9776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0983 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 704 - 615
Alignment:
Q  1 attaggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaa--tatgtgtaaaaaacttaaacgacatttatttt 89  Q
    |||| ||||||||||||||||||||| | | ||| | ||||| |||| |||||||||  |||||||||||| ||||||||||||| |||||    
T  704 attaagataatttggtaaaataacatct-cttttttattaataaatgtatttcttaacatatgtgtaaaaatcttaaacgacattcatttt 615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 4279 - 4371
Alignment:
Q  4 aggataatttggtaaaataacatttacctttcttttaattaatgcatttcttaata--tgtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||||||||||||||||||| || ||  ||||||||  |||||  |||||||||||  |||||||||| ||||||| | ||| ||||||||||    
T  4279 aggataatttggtaaaataatatctatatttcttttctttaatatatttcttaatatgtgtgtaaaaaccttaaacaaaattcattttaaaac 4371  T

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Target: scaffold0332 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 3835 - 3743
Alignment:
Q  4 aggataatttggtaaaataa-catttacctttcttttaattaatgcatttctta--atatgtgtaaaaaacttaaacgacatttattttaaaac 94  Q
    |||||||||||||||||||| ||||| | ||||||||||| | |||||||||||  || |||||||| | || |||||||| | ||||||||||    
T  3835 aggataatttggtaaaataatcattttc-tttcttttaatcattgcatttcttattatgtgtgtaaagacctaaaacgacactcattttaaaac 3743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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