View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18982_low_58 (Length: 311)
Name: NF18982_low_58
Description: NF18982
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18982_low_58 |
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Alignment Details
Target: chr7 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 14 - 292
Target Start/End: Complemental strand, 36026033 - 36025755
Alignment:
| Q |
14 |
atatcaaacttgagaggacagattttaggttgaggttgtatttatcatgttaaattattgtgtaaggctcgtagattataaataaactcatttgacacaa |
113 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36026033 |
atatcaaacttgagaggacagattttaggttgaggttgtatttatcatgttaaattattgtgtaaggctcgtagattataaataaactcatttgacacaa |
36025934 |
T |
|
| Q |
114 |
aactattacaaataagaaagtgttctaagaaaagcataaataaacaccagctagacaacatagtgcaattagctatctgttccagagacagcaatgtctt |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36025933 |
aactattacaaataagaaagtgttctaagaaaagcataaataaacaccagctagacaacatagtgcaattagctatctgttccagagacagcaatgtctt |
36025834 |
T |
|
| Q |
214 |
cttctatttcaatctatattaatatcatcatcttcaatatagttgttactcctttactcacgcacagccacaaaggctt |
292 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36025833 |
cttctatttcaatctatattaatattatcatcttcaatatagttgttactcctttactcacgcacagccacaaaggctt |
36025755 |
T |
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