View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18982_low_76 (Length: 262)
Name: NF18982_low_76
Description: NF18982
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18982_low_76 |
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Alignment Details
Target: chr1 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 52871019 - 52871257
Alignment:
| Q |
1 |
catctcaaccgtataccatttccctgttgcttaatacatctattaccatttctctgtttcttctttctccttcaacgcaagacttttctctcttacacca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
52871019 |
catctcaaccgtataccatttccctgttgcttaatacatctattaccatttctctgtttcttctttctccttcaacacaagacttttctctcttacacca |
52871118 |
T |
|
| Q |
101 |
tgtttattgttctttcaactaaatgagcaactcataattttcattgccatacgattaattcttttctatttctgaaataatcatccataaattccattaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52871119 |
tgtttattgttctttcaactaaatgagcaactcataattttcattgccatacgattaattcttttctatttctgaaataatcatccataaattccattaa |
52871218 |
T |
|
| Q |
201 |
tgtctacttactaagacatggccggtcacaaatagtaga |
239 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
52871219 |
tgtctacttactaagacatggccggtcacaaatagtaga |
52871257 |
T |
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