View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18983_high_4 (Length: 377)

Name: NF18983_high_4
Description: NF18983
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18983_high_4
NF18983_high_4
[»] chr5 (9 HSPs)
chr5 (1-229)||(7937110-7937348)
chr5 (238-346)||(23508555-23508663)
chr5 (238-346)||(24584081-24584189)
chr5 (238-300)||(21934623-21934685)
chr5 (309-346)||(14884380-14884417)
chr5 (309-346)||(20345224-20345261)
chr5 (309-346)||(22505621-22505658)
chr5 (309-346)||(25851014-25851051)
chr5 (281-346)||(26056562-26056627)
[»] scaffold0170 (1 HSPs)
scaffold0170 (238-346)||(35071-35179)
[»] scaffold0021 (4 HSPs)
scaffold0021 (238-346)||(90488-90596)
scaffold0021 (238-346)||(8143-8251)
scaffold0021 (238-346)||(21086-21193)
scaffold0021 (238-346)||(30662-30769)
[»] chr4 (7 HSPs)
chr4 (238-346)||(14999603-14999711)
chr4 (238-346)||(15290365-15290473)
chr4 (258-346)||(12340074-12340162)
chr4 (309-346)||(3262001-3262038)
chr4 (309-346)||(7357295-7357332)
chr4 (309-346)||(11204439-11204476)
chr4 (309-346)||(29450744-29450781)
[»] chr1 (12 HSPs)
chr1 (238-346)||(20528025-20528133)
chr1 (238-346)||(20828671-20828779)
chr1 (238-346)||(20928026-20928134)
chr1 (238-346)||(41215139-41215247)
chr1 (238-346)||(22133031-22133139)
chr1 (251-346)||(20172147-20172242)
chr1 (309-346)||(20074988-20075025)
chr1 (309-346)||(20297455-20297492)
chr1 (309-346)||(31537276-31537313)
chr1 (309-346)||(38910105-38910142)
chr1 (309-346)||(48425947-48425984)
chr1 (309-346)||(52988815-52988852)
[»] scaffold0302 (1 HSPs)
scaffold0302 (238-342)||(1197-1301)
[»] scaffold0225 (1 HSPs)
scaffold0225 (238-346)||(26382-26490)
[»] scaffold0141 (1 HSPs)
scaffold0141 (238-346)||(23949-24057)
[»] scaffold0120 (1 HSPs)
scaffold0120 (238-346)||(25164-25272)
[»] scaffold0011 (4 HSPs)
scaffold0011 (238-346)||(181976-182084)
scaffold0011 (238-346)||(73807-73915)
scaffold0011 (238-346)||(78188-78296)
scaffold0011 (249-346)||(175723-175820)
[»] chr8 (7 HSPs)
chr8 (238-346)||(20650005-20650113)
chr8 (238-346)||(21847987-21848095)
chr8 (238-346)||(16415109-16415217)
chr8 (238-346)||(21194202-21194310)
chr8 (238-346)||(22437313-22437421)
chr8 (238-341)||(23903185-23903288)
chr8 (309-346)||(16268874-16268911)
[»] chr7 (14 HSPs)
chr7 (238-346)||(7826846-7826954)
chr7 (238-346)||(27104990-27105098)
chr7 (238-346)||(27173227-27173335)
chr7 (238-346)||(4442873-4442981)
chr7 (249-346)||(13458990-13459087)
chr7 (249-346)||(14207278-14207373)
chr7 (249-346)||(14215968-14216063)
chr7 (267-346)||(22034972-22035051)
chr7 (282-346)||(17142518-17142582)
chr7 (281-346)||(17131661-17131726)
chr7 (309-346)||(13965862-13965899)
chr7 (309-346)||(26091992-26092029)
chr7 (309-346)||(40925011-40925048)
chr7 (309-346)||(49155319-49155356)
[»] chr6 (6 HSPs)
chr6 (238-346)||(16379725-16379833)
chr6 (238-346)||(16100836-16100944)
chr6 (238-346)||(16647321-16647429)
chr6 (238-346)||(18401466-18401574)
chr6 (238-331)||(14133902-14133995)
chr6 (238-273)||(1646239-1646274)
[»] chr3 (11 HSPs)
chr3 (238-346)||(8271845-8271953)
chr3 (238-346)||(30149943-30150051)
chr3 (239-346)||(15944041-15944148)
chr3 (238-346)||(6150299-6150407)
chr3 (238-346)||(13964801-13964909)
chr3 (238-346)||(17201221-17201329)
chr3 (238-346)||(22150183-22150291)
chr3 (309-346)||(10408625-10408662)
chr3 (309-346)||(12509918-12509955)
chr3 (309-346)||(28756976-28757013)
chr3 (309-346)||(47126601-47126638)
[»] chr2 (4 HSPs)
chr2 (238-346)||(22280693-22280801)
chr2 (239-346)||(22739401-22739508)
chr2 (238-336)||(24567425-24567523)
chr2 (238-346)||(25131197-25131305)
[»] scaffold0266 (1 HSPs)
scaffold0266 (238-346)||(7072-7180)
[»] scaffold0124 (1 HSPs)
scaffold0124 (238-346)||(5015-5123)
[»] scaffold0008 (2 HSPs)
scaffold0008 (238-346)||(131699-131807)
scaffold0008 (238-346)||(26762-26870)
[»] scaffold0673 (1 HSPs)
scaffold0673 (238-346)||(5514-5622)
[»] scaffold0467 (2 HSPs)
scaffold0467 (238-346)||(831-939)
scaffold0467 (263-346)||(13541-13624)
[»] scaffold0218 (1 HSPs)
scaffold0218 (239-346)||(1162-1269)
[»] scaffold0610 (1 HSPs)
scaffold0610 (238-346)||(4112-4220)
[»] scaffold0465 (1 HSPs)
scaffold0465 (238-346)||(12835-12943)
[»] scaffold0162 (1 HSPs)
scaffold0162 (238-346)||(15896-16004)
[»] scaffold0561 (1 HSPs)
scaffold0561 (238-346)||(6214-6322)
[»] scaffold0962 (1 HSPs)
scaffold0962 (238-346)||(2559-2665)
[»] scaffold0462 (1 HSPs)
scaffold0462 (256-346)||(2701-2791)
[»] scaffold0112 (1 HSPs)
scaffold0112 (238-346)||(3485-3593)
[»] scaffold0138 (1 HSPs)
scaffold0138 (249-346)||(25910-26008)
[»] scaffold0058 (1 HSPs)
scaffold0058 (268-341)||(77446-77519)
[»] scaffold0233 (1 HSPs)
scaffold0233 (267-346)||(20936-21015)
[»] scaffold0088 (1 HSPs)
scaffold0088 (309-346)||(29991-30028)
[»] scaffold0068 (1 HSPs)
scaffold0068 (309-346)||(67318-67355)
[»] scaffold0041 (1 HSPs)
scaffold0041 (309-346)||(41792-41829)
[»] scaffold0010 (1 HSPs)
scaffold0010 (309-346)||(39543-39580)
[»] scaffold0001 (1 HSPs)
scaffold0001 (309-346)||(514563-514600)
[»] scaffold0423 (1 HSPs)
scaffold0423 (309-345)||(2474-2510)


Alignment Details
Target: chr5 (Bit Score: 152; Significance: 2e-80; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 7937110 - 7937348
Alignment:
Q  1 accttagattattaatagatctgagtttgtcactataaacgatgatgaatgaatattgtgagaactgtacc----------agcgagagagagagtccta 90  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||          || ||||||||||||||||    
T  7937110 accttagattattgataaatctgagtttgtcactataaacgatgatgaatgaatactgtgagaactgtaccggggggagagagagagagagagagtccta 7937209  T
Q  91 tatgcgagtaccaaaacagcactggcagggatgaatcgagcaagttagtgaaccatagaacagtatcaacgagagacttttccggcgcaagagaacacta 190  Q
    | ||||||||| ||| |||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7937210 tctgcgagtacaaaatcagcactggcagagatgaatcgagcaagtgagtgaaccaaagaacagtatcaacgagagacttttccggcgcaagagaacacta 7937309  T
Q  191 ccgtcatcgacgactcaatactagttgcgaaagagaaag 229  Q
    ||| | |||||||||||||||| ||||||||||||||||    
T  7937310 ccgacgtcgacgactcaatactggttgcgaaagagaaag 7937348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 238 - 346
Target Start/End: Original strand, 23508555 - 23508663
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    |||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23508555 gggtgttaataaccattccccgcaacaaaggagttacagccaatttcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 23508654  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  23508655 aattgcaat 23508663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 238 - 346
Target Start/End: Original strand, 24584081 - 24584189
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24584081 gggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccgagataaaagaatgagtagcaccagtatcaat 24584180  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  24584181 aattgcaat 24584189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 21934685 - 21934623
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaac 300  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  21934685 gggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaac 21934623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Complemental strand, 14884417 - 14884380
Alignment:
Q  309 ataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  14884417 ataaaacaatgagtagcaccagtatcaataatagcaat 14884380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Original strand, 20345224 - 20345261
Alignment:
Q  309 ataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  20345224 ataaaacaatgagtagcaccagtatcaataatagcaat 20345261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Original strand, 22505621 - 22505658
Alignment:
Q  309 ataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  22505621 ataaaacaatgagtagcaccagtatcaataatagcaat 22505658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Original strand, 25851014 - 25851051
Alignment:
Q  309 ataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  25851014 ataaaacaatgagtagcaccagtatcaataatagcaat 25851051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 346
Target Start/End: Original strand, 26056562 - 26056627
Alignment:
Q  281 attcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||||||||||||||||| |||  | ||||||||||| || ||||  ||||||||||| |||||    
T  26056562 attcaaacgttcaacacaaccaacataaataaaagaatgtgtcgcactcgtatcaataatagcaat 26056627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 101; Significance: 6e-50; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 238 - 346
Target Start/End: Original strand, 35071 - 35179
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35071 gggtgtcaataaccattccacgcaacaaaggagttacaaccaaatacaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 35170  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  35171 aattgcaat 35179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 101; Significance: 6e-50; HSPs: 4)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 238 - 346
Target Start/End: Original strand, 90488 - 90596
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  90488 gggtgtcaataaccattccccgcaacaaaggagttacaaccaatttcaaacgctcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 90587  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  90588 aattgcaat 90596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 238 - 346
Target Start/End: Original strand, 8143 - 8251
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    |||||||||||||||||||||| |||||||| ||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8143 gggtgtcaataaccattccccggaacaaaggggttacaaccattttcaaacgctcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 8242  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  8243 aattgcaat 8251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 238 - 346
Target Start/End: Complemental strand, 21193 - 21086
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||| || ||||| || ||||||||  |||||||||| |  |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  21193 gggtgtcgatgaccatccctcgcaacaacagagttacaac-atgttcaaacggtcaacacaactaaccgagataaaagaatgagtagcaccactatcaat 21095  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  21094 aattgcaat 21086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 238 - 346
Target Start/End: Complemental strand, 30769 - 30662
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||| || ||||| || ||||||||  |||||||||| |  |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  30769 gggtgtcgatgaccatccctcgcaacaacagagttacaac-atgttcaaacggtcaacacaactaaccgagataaaagaatgagtagcaccactatcaat 30671  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  30670 aattgcaat 30662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 6e-50; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 238 - 346
Target Start/End: Original strand, 14999603 - 14999711
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  14999603 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccgagataaaagaatgagtagcaccagtatcaat 14999702  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  14999703 aattgcaat 14999711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 238 - 346
Target Start/End: Complemental strand, 15290473 - 15290365
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  15290473 gggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccgagataaaagaatgagtagcaccactatcaat 15290374  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  15290373 aattgcaat 15290365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 258 - 346
Target Start/End: Complemental strand, 12340162 - 12340074
Alignment:
Q  258 cgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||    
T  12340162 cgcaacaacggagtcacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtaggaccaatatcaataatcgcaat 12340074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Complemental strand, 3262038 - 3262001
Alignment:
Q  309 ataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  3262038 ataaaacaatgagtagcaccagtatcaataatagcaat 3262001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Original strand, 7357295 - 7357332
Alignment:
Q  309 ataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  7357295 ataaaacaatgagtagcaccagtatcaataatagcaat 7357332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Complemental strand, 11204476 - 11204439
Alignment:
Q  309 ataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  11204476 ataaaacaatgagtagcaccagtatcaataatagcaat 11204439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Complemental strand, 29450781 - 29450744
Alignment:
Q  309 ataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  29450781 ataaaacaatgagtagcaccagtatcaataatagcaat 29450744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 101; Significance: 6e-50; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 238 - 346
Target Start/End: Original strand, 20528025 - 20528133
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20528025 gggtgtcaataaccattccccgcaacaaaggagttacaaccaatttcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccaggatcaat 20528124  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  20528125 aattgcaat 20528133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 238 - 346
Target Start/End: Complemental strand, 20828779 - 20828671
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20828779 gggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccgagataaaagaatgagtagcaccagtatcaat 20828680  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  20828679 aattgcaat 20828671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 238 - 346
Target Start/End: Original strand, 20928026 - 20928134
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    |||||||||||||||||||||| ||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  20928026 gggtgtcaataaccattccccgtaacaaaggagttataaccaatttcaaacgatcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 20928125  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  20928126 aattgcaat 20928134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 238 - 346
Target Start/End: Complemental strand, 41215247 - 41215139
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||| |||||||| || |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  41215247 gggtgtcgataaccatccctcgcaacaacggagttacaaccaaattcaaacgctcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 41215148  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  41215147 aattgcaat 41215139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 238 - 346
Target Start/End: Complemental strand, 22133139 - 22133031
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||| || ||||| || |||||||| ||||||| |||||| |||||| | |||||||||||||||||| ||||||||||||||||||| ||||||||    
T  22133139 gggtgtcgatgaccatccctcgcaacaacggagttagaaccaatttcaaatgctcaacacaactaaccgaggtaaaagaatgagtagcaccggtatcaat 22133040  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  22133039 aattgcaat 22133031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 346
Target Start/End: Original strand, 20172147 - 20172242
Alignment:
Q  251 cattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||| | ||||||  |||||| ||||||| ||||||||||||||||||||| |||||| |||||||  ||||||| |||||||| |||| ||||    
T  20172147 cattcctctcaacaacagagttaaaaccaaactcaaacgttcaacacaactaagcgagatgaaagaatacgtagcactagtatcaacaatttcaat 20172242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Complemental strand, 20075025 - 20074988
Alignment:
Q  309 ataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  20075025 ataaaacaatgagtagcaccagtatcaataatagcaat 20074988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Original strand, 20297455 - 20297492
Alignment:
Q  309 ataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  20297455 ataaaacaatgagtagcaccagtatcaataatagcaat 20297492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Complemental strand, 31537313 - 31537276
Alignment:
Q  309 ataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  31537313 ataaaacaatgagtagcaccagtatcaataatagcaat 31537276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Complemental strand, 38910142 - 38910105
Alignment:
Q  309 ataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  38910142 ataaaacaatgagtagcaccagtatcaataatagcaat 38910105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Original strand, 48425947 - 48425984
Alignment:
Q  309 ataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  48425947 ataaaacaatgagtagcaccagtatcaataatagcaat 48425984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Original strand, 52988815 - 52988852
Alignment:
Q  309 ataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  52988815 ataaaacaatgagtagcaccagtatcaataatagcaat 52988852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 238 - 342
Target Start/End: Original strand, 1197 - 1301
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1197 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaaaacaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 1296  T
Q  338 aattg 342  Q
    |||||    
T  1297 aattg 1301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 238 - 346
Target Start/End: Original strand, 26382 - 26490
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  26382 gggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccgagataaaagaatgagtagcaccagtatcaat 26481  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  26482 aattgcaat 26490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 238 - 346
Target Start/End: Original strand, 23949 - 24057
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23949 gggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccgagataaaagaatgagtagcaccagtatcaat 24048  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  24049 aattgcaat 24057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 238 - 346
Target Start/End: Original strand, 25164 - 25272
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  25164 gggtgtcaataaccattccccgcaacaaaggagttacaaccaatttcaaacgctcaacataactaaccgagataaaagaatgagtagcaccagtatcaat 25263  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  25264 aattgcaat 25272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 97; Significance: 1e-47; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 238 - 346
Target Start/End: Original strand, 181976 - 182084
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  181976 gggtgtcaataaccattccccgcaaaaaaggagttacaacgaatttcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 182075  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  182076 aattgcaat 182084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 238 - 346
Target Start/End: Complemental strand, 73915 - 73807
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  73915 gggtgtcaataaccattccccgcaatagaggagttacaaccaatttcaaacgttcaacacaactaaccgagataaaacaatgagtagcaccagtatcaat 73816  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  73815 aattgcaat 73807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 238 - 346
Target Start/End: Complemental strand, 78296 - 78188
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  78296 gggtgtcaataaccattccccgcaatagaggagttacaaccaatttcaaacgttcaacacaactaaccgagataaaacaatgagtagcaccagtatcaat 78197  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  78196 aattgcaat 78188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 249 - 346
Target Start/End: Complemental strand, 175820 - 175723
Alignment:
Q  249 accattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||||| | ||| || ||||| ||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  175820 accattcctcacaataacggagtcacaaccaaattcaaacgtttaacacaactaacggagatgaaagaatgagtagcaccagtatcaataattgcaat 175723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 97; Significance: 1e-47; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 238 - 346
Target Start/End: Complemental strand, 20650113 - 20650005
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  20650113 gggtgtcaataaccatcccccgcaacaaaggagttacaaccaatttcaaacgctcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 20650014  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  20650013 aattgcaat 20650005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 238 - 346
Target Start/End: Complemental strand, 21848095 - 21847987
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21848095 gggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccgagataaaagaatgagtagcaccagtatcaat 21847996  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  21847995 aattgcaat 21847987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 238 - 346
Target Start/End: Original strand, 16415109 - 16415217
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    |||||||||||||||||||||||||||||||||| | || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16415109 gggtgtcaataaccattccccgcaacaaaggagtcaaaatcaatttcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 16415208  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  16415209 aattgcaat 16415217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 238 - 346
Target Start/End: Complemental strand, 21194310 - 21194202
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||| |||||||| |||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||| |||||||    
T  21194310 gggtgtcgataaccatcccccgcaacaaaggagttacaaccaatttcaaacgcttaacacaactaaccgagataaaagaatgagtagcaccaatatcaat 21194211  T
Q  338 aattgcaat 346  Q
    |||| ||||    
T  21194210 aattccaat 21194202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 238 - 346
Target Start/End: Original strand, 22437313 - 22437421
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||| || ||||| || |||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| || ||||||||||    
T  22437313 gggtgtcgatgaccatccctcgcaacaacggagttacaaccaatttcaaacgctcaacacaactaaccgagataaaagaatgagtaacatcagtatcaat 22437412  T
Q  338 aattgcaat 346  Q
    ||| |||||    
T  22437413 aatcgcaat 22437421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 238 - 341
Target Start/End: Original strand, 23903185 - 23903288
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||| || ||||| || ||| | || ||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||    
T  23903185 gggtgtcgatgaccatccctcgcgataacggagttacaaccaaattcaaatgctcaacacaactagccgagataaaagaatgagtagcaccagtatcaat 23903284  T
Q  338 aatt 341  Q
    ||||    
T  23903285 aatt 23903288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Complemental strand, 16268911 - 16268874
Alignment:
Q  309 ataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  16268911 ataaaacaatgagtagcaccagtatcaataatagcaat 16268874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 97; Significance: 1e-47; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 238 - 346
Target Start/End: Original strand, 7826846 - 7826954
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7826846 gggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccgagataaaagaatgagtagcaccagtatcaat 7826945  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  7826946 aattgcaat 7826954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 238 - 346
Target Start/End: Complemental strand, 27105098 - 27104990
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27105098 gggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccgagataaaagaatgagtagcaccagtatcaat 27104999  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  27104998 aattgcaat 27104990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 238 - 346
Target Start/End: Original strand, 27173227 - 27173335
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27173227 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaacccaaacgttcaacacaactagccgagataaaagaatgagtagcaccagtatcaat 27173326  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  27173327 aattgcaat 27173335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 238 - 346
Target Start/End: Original strand, 4442873 - 4442981
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    |||||||||| ||||| || |||||||| ||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||    
T  4442873 gggtgtcaatgaccatccctcgcaacaacggagttacaaccaaattcaaacgctcaacacaactaaccgaggtagaagaatgagtagcaccagtatcaat 4442972  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  4442973 aattgcaat 4442981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 249 - 346
Target Start/End: Original strand, 13458990 - 13459087
Alignment:
Q  249 accattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    ||||| || ||||||||  |||||||||| ||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13458990 accatccctcgcaacaacagagttacaactaaattcaaatgctcaacacaactaaccgaaataaaagaatgagtagcaccagtatcaataattgcaat 13459087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 249 - 346
Target Start/End: Original strand, 14207278 - 14207373
Alignment:
Q  249 accattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||  ||  |||||||||| ||||||| ||||||||||||    
T  14207278 accattccacgcgacaacggagttacaaccaaattcaaacgttcaacacaactaaccgagaccaa--aatgagtagcgccagtattaataattgcaat 14207373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 249 - 346
Target Start/End: Original strand, 14215968 - 14216063
Alignment:
Q  249 accattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||  ||  |||||||||| ||||||| ||||||||||||    
T  14215968 accattccacgcgacaacggagttacaaccaaattcaaacgttcaacacaactaaccgagaccaa--aatgagtagcgccagtattaataattgcaat 14216063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 267 - 346
Target Start/End: Original strand, 22034972 - 22035051
Alignment:
Q  267 ggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    ||||||| ||||||||||||| ||||||||||||||| |||||| |||||||| ||||||| |||||||| | |||||||    
T  22034972 ggagttaaaaccaaattcaaaggttcaacacaactaagcgagatgaaagaatgcgtagcacaagtatcaacatttgcaat 22035051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 282 - 346
Target Start/End: Complemental strand, 17142582 - 17142518
Alignment:
Q  282 ttcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||||||||||||||||||| ||||||||||||||||  |||||| | |||||||||||||||    
T  17142582 ttcaaacgttcaacacaactaagcgagataaaagaatgaaaagcacccgaatcaataattgcaat 17142518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 346
Target Start/End: Original strand, 17131661 - 17131726
Alignment:
Q  281 attcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    ||||||||||||  ||||||||| ||| ||||||||||| |||||||| |||||||||||| ||||    
T  17131661 attcaaacgttccgcacaactaagcgatataaaagaatgggtagcacccgtatcaataattacaat 17131726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Complemental strand, 13965899 - 13965862
Alignment:
Q  309 ataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  13965899 ataaaacaatgagtagcaccagtatcaataatagcaat 13965862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Complemental strand, 26092029 - 26091992
Alignment:
Q  309 ataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  26092029 ataaaacaatgagtagcaccagtatcaataatagcaat 26091992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Complemental strand, 40925048 - 40925011
Alignment:
Q  309 ataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  40925048 ataaaacaatgagtagcaccagtatcaataatagcaat 40925011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Original strand, 49155319 - 49155356
Alignment:
Q  309 ataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  49155319 ataaaacaatgagtagcaccagtatcaataatagcaat 49155356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 1e-47; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 238 - 346
Target Start/End: Complemental strand, 16379833 - 16379725
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16379833 gggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccgagataaaagaatgagtagcaccagtatcaat 16379734  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  16379733 aattgcaat 16379725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 238 - 346
Target Start/End: Original strand, 16100836 - 16100944
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||| |||||||    
T  16100836 gggtgtcaataaccattccccgcaacaaaggagttacaaccaatttcaaacgctcaacacaactaaccgagataaaaaaatgagtagcaccaatatcaat 16100935  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  16100936 aattgcaat 16100944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 238 - 346
Target Start/End: Complemental strand, 16647429 - 16647321
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  16647429 gggtgtcaataaccattccacgcaacaaatgagttacaaccaaatccaaacgtttaacacaactagccgagataaaagaatgagtagcaccagtatcaat 16647330  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  16647329 aattgcaat 16647321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 238 - 346
Target Start/End: Original strand, 18401466 - 18401574
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| || |||| ||||| |||||||    
T  18401466 gggtgtcaataaccattccccgcaacaaaggagttccaaccaatttcaaacgttcaacacaactaaccgagataaaagtatcagtaacaccaatatcaat 18401565  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  18401566 aattgcaat 18401574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 238 - 331
Target Start/End: Original strand, 14133902 - 14133995
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagt 331  Q
    |||||||||| ||||| || |||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  14133902 gggtgtcaatgaccatccctcgcaacaacggagttacaaccaatttcaaacgctcaacacaactaaccgagataaaagaatgagtagcaccagt 14133995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 273
Target Start/End: Complemental strand, 1646274 - 1646239
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagtta 273  Q
    ||||||||||||||||||||||||||||||||||||    
T  1646274 gggtgtcaataaccattccccgcaacaaaggagtta 1646239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 1e-47; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 238 - 346
Target Start/End: Complemental strand, 8271953 - 8271845
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  8271953 gggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccgagataaaagaatgagtagcaccagtatcaat 8271854  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  8271853 aattgcaat 8271845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 238 - 346
Target Start/End: Original strand, 30149943 - 30150051
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  30149943 gggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccgagataaaagaatgagtagcaccagtatcaat 30150042  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  30150043 aattgcaat 30150051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 239 - 346
Target Start/End: Complemental strand, 15944148 - 15944041
Alignment:
Q  239 ggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaata 338  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15944148 ggtgtcaataaccattccctgcaacaaagaagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccaatatcaata 15944049  T
Q  339 attgcaat 346  Q
    ||||||||    
T  15944048 attgcaat 15944041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 238 - 346
Target Start/End: Complemental strand, 6150407 - 6150299
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||    
T  6150407 gggtgtcaataaccattccccgcaacaagggagttacaaccaatttcaaacgctcaacacaactaaccgatataaaagaatgagtagcaccaatatcaat 6150308  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  6150307 aattgcaat 6150299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 238 - 346
Target Start/End: Complemental strand, 13964909 - 13964801
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    |||| |||||||||||||| ||||||||| ||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13964909 gggtatcaataaccattccacgcaacaaacgagttacaaccaaatccaaactttcaacacaactagccgagataaaagaatgagtagcaccagtatcaat 13964810  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  13964809 aattgcaat 13964801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 238 - 346
Target Start/End: Original strand, 17201221 - 17201329
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||| || ||||| || ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  17201221 gggtgtcgatgaccatccctcgcaacaaaggagttacaaccaatttcaaacgctcaacacaactaaccgagataaaagaatgagtagcactagtatcaat 17201320  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  17201321 aattgcaat 17201329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 238 - 346
Target Start/End: Complemental strand, 22150291 - 22150183
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    |||| ||||||||| |||||||||||||||||||||||||||| |||||||| |||||||| |||||| |||||||||||||| ||||||||||||||||    
T  22150291 gggtatcaataaccgttccccgcaacaaaggagttacaaccaatttcaaacgctcaacacagctaaccaagataaaagaatgactagcaccagtatcaat 22150192  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  22150191 aattgcaat 22150183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Original strand, 10408625 - 10408662
Alignment:
Q  309 ataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  10408625 ataaaacaatgagtagcaccagtatcaataatagcaat 10408662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Complemental strand, 12509955 - 12509918
Alignment:
Q  309 ataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  12509955 ataaaacaatgagtagcaccagtatcaataatagcaat 12509918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Original strand, 28756976 - 28757013
Alignment:
Q  309 ataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  28756976 ataaaacaatgagtagcaccagtatcaataatagcaat 28757013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Original strand, 47126601 - 47126638
Alignment:
Q  309 ataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  47126601 ataaaacaatgagtagcaccagtatcaataatagcaat 47126638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 1e-47; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 238 - 346
Target Start/End: Original strand, 22280693 - 22280801
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  22280693 gggtgtcaataaccattccccgcaacaaaggagttacaaccaatttcaaacgttcaacacaactaaccgagataaatgaatgactagcaccagtatcaat 22280792  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  22280793 aattgcaat 22280801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 239 - 346
Target Start/End: Complemental strand, 22739508 - 22739401
Alignment:
Q  239 ggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaata 338  Q
    |||||| |||||||| |||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  22739508 ggtgtcgataaccatcccccgcaacaaaggagttacaaccaatttcaaacgcacaacacaactaaccgagataaaagaatgagtagcaccagtatcaata 22739409  T
Q  339 attgcaat 346  Q
    ||||||||    
T  22739408 attgcaat 22739401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 238 - 336
Target Start/End: Complemental strand, 24567523 - 24567425
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaa 336  Q
    |||||||||||| ||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  24567523 gggtgtcaataatcattccctgcaacaaaggagttacaaccaatttcaaacgctcaacacaactaaccgagataaaagaatgagtagcactagtatcaa 24567425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 238 - 346
Target Start/End: Original strand, 25131197 - 25131305
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||| || ||||| || ||| |||| ||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  25131197 gggtgtcgatgaccatccctcgcgacaacggagttacaaccaaattcagacgttaaacacaactaaccgagatagaagaatgagtagcaccagtatcaat 25131296  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  25131297 aattgcaat 25131305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 238 - 346
Target Start/End: Complemental strand, 7180 - 7072
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||    
T  7180 gggtgtcaataaccattccccgcaacaaaggagttacaaccaatttcaaacgatcaacgcaactaaccgagataaaagaataagtagcaccagtatcaat 7081  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  7080 aattgcaat 7072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 238 - 346
Target Start/End: Complemental strand, 5123 - 5015
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||    
T  5123 gggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccgagataaaagaatgagtagcaccagtatcgat 5024  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  5023 aattgcaat 5015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 93; Significance: 3e-45; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 238 - 346
Target Start/End: Complemental strand, 131807 - 131699
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||| |||||||||    
T  131807 gggtgtcaataaccattccccgcaacaaaggagttacaaccaatttcaaacgatcaacacaactaaccgagataaaataatgagtagcacaagtatcaat 131708  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  131707 aattgcaat 131699  T

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Target: scaffold0008; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 238 - 346
Target Start/End: Original strand, 26762 - 26870
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    |||||||||||||||| || |||||||||||||| |||||||||  |||||  | |||||||||||  ||||||||||||| ||||||| ||||||||||    
T  26762 gggtgtcaataaccataccacgcaacaaaggagtaacaaccaaaaacaaacaataaacacaactaaaagagataaaagaataagtagcaacagtatcaat 26861  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  26862 aattgcaat 26870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 89; Significance: 8e-43; HSPs: 1)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 238 - 346
Target Start/End: Complemental strand, 5622 - 5514
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||| |||||||||||||||||||||||||||||||    
T  5622 gggtgtcaataaccattccccgcaacaaaggagttataaccaatttcaaacgctcaacataactaaccaagataaaagaatgagtagcaccagtatcaat 5523  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  5522 aattgcaat 5514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 89; Significance: 8e-43; HSPs: 2)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 238 - 346
Target Start/End: Complemental strand, 939 - 831
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    |||||||||||||||| ||| || ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  939 gggtgtcaataaccatcccctgcgacaaaggagttacaaccaatttcaaacgttcaatacaactaaccgagataaaagaatgagtagcaccagtatcaat 840  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  839 aattgcaat 831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 263 - 346
Target Start/End: Complemental strand, 13624 - 13541
Alignment:
Q  263 caaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13624 caaaggagttacaaccaatttcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaataattgcaat 13541  T

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Target: scaffold0218 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 239 - 346
Target Start/End: Complemental strand, 1269 - 1162
Alignment:
Q  239 ggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaata 338  Q
    |||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||    
T  1269 ggtgtcgataaccattccccgcaacaaaggagttacgaccaatttcaaacgttcaacacaactaatcgagataaaagaatgagtagcaccagtatctata 1170  T
Q  339 attgcaat 346  Q
    ||||||||    
T  1169 attgcaat 1162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 238 - 346
Target Start/End: Complemental strand, 4220 - 4112
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||| |||||||||||||||||||||||||||||| ||    
T  4220 gggtatcaataaccattccccgcaacaaaggagttacaaccaatttcaaacgctcaacacaattaatcgagataaaagaatgagtagcaccagtatcgat 4121  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  4120 aattgcaat 4112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 238 - 346
Target Start/End: Complemental strand, 12943 - 12835
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||| | ||| |||||||    
T  12943 gggtgtcaataaccattccccgcaacaaaggagttacaaccaatttcaaacgttcaacacaactaaccgagataaaagtattagtatctccattatcaat 12844  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  12843 aattgcaat 12835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 238 - 346
Target Start/End: Original strand, 15896 - 16004
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    |||||||||||||||||||   ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||| |||||||    
T  15896 gggtgtcaataaccattccaaacaacaaaggagttacaaccaaatacaaacgttcaacacaactaaccgagataaaagaataagtaacaccaatatcaat 15995  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  15996 aattgcaat 16004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 238 - 346
Target Start/End: Complemental strand, 6322 - 6214
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||| || |||||||| ||||| || ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  6322 gggtgtcgatgaccattcctcgcaataacggagtcacaaccaaattcaaacgctcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 6223  T
Q  338 aattgcaat 346  Q
     ||||||||    
T  6222 tattgcaat 6214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 238 - 346
Target Start/End: Original strand, 2559 - 2665
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||| || ||||| || ||||| || |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  2559 gggtgtcgatgaccatccctcgcaaaaacggagttacaaccaaattcaaacg--caacacaactaaccgagataaaagaatgagtagcaccagtatcaat 2656  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  2657 aattgcaat 2665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 256 - 346
Target Start/End: Original strand, 2701 - 2791
Alignment:
Q  256 cccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||||||||||||||||| |||| |||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2701 cccgcaacaaaggagttacagccaatttcaaaagctcaacacaactaaccgagataaaagaatgagtagcaccggtatcaataattgcaat 2791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 238 - 346
Target Start/End: Original strand, 3485 - 3593
Alignment:
Q  238 gggtgtcaataaccattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaat 337  Q
    ||||||| || ||||| || ||||||||  ||||| ||| |||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||    
T  3485 gggtgtcgatgaccatccctcgcaacaacagagttccaaacaaattcaaacgttgaacacaactaaccgagatgaaagaatgagtagcaccaatatcaat 3584  T
Q  338 aattgcaat 346  Q
    |||||||||    
T  3585 aattgcaat 3593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 249 - 346
Target Start/End: Complemental strand, 26008 - 25910
Alignment:
Q  249 accattccccgcaacaaaggagttacaaccaaattcaaacgttcaacacaactaaccgagat-aaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    ||||| || |||||||| |||||||||| ||| |||||||| ||||| |||||||||||||| |||| |||||||||||| | ||||||||||||||||    
T  26008 accatcccacgcaacaacggagttacaatcaatttcaaacgctcaacgcaactaaccgagataaaaaaaatgagtagcactaatatcaataattgcaat 25910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 268 - 341
Target Start/End: Original strand, 77446 - 77519
Alignment:
Q  268 gagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaataatt 341  Q
    |||||| |||||||||||||||||||||| |||||| |||||| |||||||| |||||||||||||||| ||||    
T  77446 gagttaaaaccaaattcaaacgttcaacataactaagcgagatgaaagaatgcgtagcaccagtatcaacaatt 77519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 346
Target Start/End: Complemental strand, 21015 - 20936
Alignment:
Q  267 ggagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||||| |||||||||||||| ||||||||||||  |||||  ||||||||||||| || |||||||| |||| ||||    
T  21015 ggagttactaccaaattcaaacgatcaacacaactagtcgagaagaaagaatgagtagaactagtatcaacaattacaat 20936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Original strand, 29991 - 30028
Alignment:
Q  309 ataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  29991 ataaaacaatgagtagcaccagtatcaataatagcaat 30028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Complemental strand, 67355 - 67318
Alignment:
Q  309 ataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  67355 ataaaacaatgagtagcaccagtatcaataatagcaat 67318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Original strand, 41792 - 41829
Alignment:
Q  309 ataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  41792 ataaaacaatgagtagcaccagtatcaataatagcaat 41829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Complemental strand, 39580 - 39543
Alignment:
Q  309 ataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  39580 ataaaacaatgagtagcaccagtatcaataatagcaat 39543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Complemental strand, 514600 - 514563
Alignment:
Q  309 ataaaagaatgagtagcaccagtatcaataattgcaat 346  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  514600 ataaaacaatgagtagcaccagtatcaataatagcaat 514563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 345
Target Start/End: Complemental strand, 2510 - 2474
Alignment:
Q  309 ataaaagaatgagtagcaccagtatcaataattgcaa 345  Q
    ||||||||||| |||||||||||||||||||| ||||    
T  2510 ataaaagaatgcgtagcaccagtatcaataatagcaa 2474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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