View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18987_low_11 (Length: 204)
Name: NF18987_low_11
Description: NF18987
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18987_low_11 |
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Alignment Details
Target: chr1 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 7 - 187
Target Start/End: Complemental strand, 29145179 - 29144999
Alignment:
| Q |
7 |
gagaaaagaaaactaacctggcttgaggaactcgatttcgatgcagggttggcttcattttgaccaacaacttgatcctttttatcatcaaccttagtta |
106 |
Q |
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||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29145179 |
gagaaaagaaaactaacctggcttgaggagcccgatttcgatgcagggttggcttcattttgaccaacaacttgatcctttttatcatcaaccttagtta |
29145080 |
T |
|
| Q |
107 |
ataccaagctagaatcataatctgaagagccatctaaaaaagttgtgtcgctgagcaaagatctagctgaaccatgtggag |
187 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
29145079 |
ataccaagctagaatcataatctgaagagccatctaaaaaagttgtgtcgctgagcaaagatctagttgaaccatgtggag |
29144999 |
T |
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