View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18988_low_4 (Length: 366)

Name: NF18988_low_4
Description: NF18988
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18988_low_4
NF18988_low_4
[»] chr6 (21 HSPs)
chr6 (15-135)||(23027233-23027353)
chr6 (15-134)||(15077884-15078003)
chr6 (15-134)||(16381891-16382010)
chr6 (19-131)||(21927853-21927965)
chr6 (15-134)||(1648332-1648451)
chr6 (15-134)||(14624875-14624994)
chr6 (15-134)||(16233672-16233791)
chr6 (16-134)||(23996893-23997011)
chr6 (19-134)||(16098698-16098813)
chr6 (19-134)||(18572299-18572414)
chr6 (19-134)||(18837426-18837541)
chr6 (15-133)||(19865331-19865449)
chr6 (15-119)||(27566513-27566617)
chr6 (79-121)||(16962976-16963018)
chr6 (79-133)||(22078209-22078263)
chr6 (79-131)||(27330954-27331006)
chr6 (79-131)||(27391694-27391746)
chr6 (79-133)||(5838738-5838792)
chr6 (82-132)||(15460047-15460097)
chr6 (79-121)||(18407473-18407515)
chr6 (79-133)||(20636820-20636874)
[»] chr2 (22 HSPs)
chr2 (15-135)||(23816955-23817075)
chr2 (16-134)||(24831100-24831218)
chr2 (15-135)||(22761481-22761601)
chr2 (19-135)||(25129062-25129178)
chr2 (15-134)||(12640146-12640265)
chr2 (15-134)||(22276689-22276808)
chr2 (19-134)||(24569581-24569696)
chr2 (15-131)||(21906085-21906201)
chr2 (15-133)||(23107644-23107762)
chr2 (16-119)||(21325194-21325297)
chr2 (15-133)||(1064162-1064280)
chr2 (15-133)||(11357788-11357906)
chr2 (79-133)||(22756379-22756433)
chr2 (15-133)||(24642153-24642271)
chr2 (79-131)||(24707398-24707450)
chr2 (79-131)||(21890634-21890686)
chr2 (15-131)||(23294346-23294462)
chr2 (79-133)||(23066866-23066920)
chr2 (79-131)||(30210832-30210884)
chr2 (136-164)||(35082025-35082053)
chr2 (79-119)||(41608313-41608353)
chr2 (79-131)||(45529986-45530038)
[»] scaffold0021 (3 HSPs)
scaffold0021 (15-134)||(24774-24893)
scaffold0021 (31-131)||(72016-72116)
scaffold0021 (31-125)||(32798-32892)
[»] chr8 (24 HSPs)
chr8 (15-134)||(22983279-22983398)
chr8 (15-133)||(21196319-21196437)
chr8 (19-134)||(20652149-20652264)
chr8 (15-123)||(23156839-23156947)
chr8 (15-134)||(21850153-21850272)
chr8 (19-135)||(22316041-22316157)
chr8 (15-135)||(25282976-25283096)
chr8 (15-134)||(16876911-16877030)
chr8 (15-134)||(25283202-25283321)
chr8 (32-112)||(23901138-23901218)
chr8 (15-134)||(22283850-22283969)
chr8 (15-133)||(22366482-22366600)
chr8 (15-133)||(19978813-19978931)
chr8 (15-113)||(16407883-16407981)
chr8 (15-133)||(21166355-21166473)
chr8 (15-133)||(21393682-21393800)
chr8 (15-133)||(21788176-21788294)
chr8 (79-133)||(30312961-30313015)
chr8 (79-133)||(21251851-21251905)
chr8 (79-131)||(21043355-21043407)
chr8 (81-133)||(22040771-22040823)
chr8 (15-70)||(22365694-22365749)
chr8 (16-46)||(29303330-29303360)
chr8 (79-119)||(15534290-15534330)
[»] scaffold0567 (1 HSPs)
scaffold0567 (15-131)||(10105-10221)
[»] chr3 (27 HSPs)
chr3 (15-135)||(17193503-17193623)
chr3 (15-134)||(30138215-30138334)
chr3 (15-134)||(30147766-30147885)
chr3 (15-134)||(6152463-6152582)
chr3 (15-134)||(13966952-13967071)
chr3 (15-134)||(16257553-16257672)
chr3 (15-134)||(16742315-16742434)
chr3 (19-131)||(6712024-6712136)
chr3 (15-134)||(8274011-8274130)
chr3 (19-131)||(18749078-18749190)
chr3 (35-135)||(15095434-15095534)
chr3 (15-134)||(266907-267026)
chr3 (56-134)||(15610554-15610632)
chr3 (15-133)||(16371812-16371930)
chr3 (15-131)||(12498647-12498763)
chr3 (79-133)||(15062207-15062261)
chr3 (15-133)||(9523118-9523236)
chr3 (15-133)||(16491794-16491912)
chr3 (15-133)||(14876111-14876229)
chr3 (79-133)||(16692627-16692681)
chr3 (79-133)||(16806539-16806593)
chr3 (19-103)||(21764301-21764385)
chr3 (137-180)||(11658518-11658561)
chr3 (79-118)||(14126222-14126261)
chr3 (79-133)||(15209354-15209408)
chr3 (79-133)||(17490313-17490367)
chr3 (15-131)||(18133950-18134066)
[»] scaffold0692 (1 HSPs)
scaffold0692 (15-134)||(3251-3370)
[»] scaffold0225 (1 HSPs)
scaffold0225 (15-134)||(24205-24324)
[»] scaffold0076 (2 HSPs)
scaffold0076 (15-134)||(41069-41188)
scaffold0076 (16-133)||(56277-56394)
[»] scaffold0008 (2 HSPs)
scaffold0008 (19-134)||(24695-24810)
scaffold0008 (19-135)||(232370-232486)
[»] chr7 (24 HSPs)
chr7 (15-134)||(27107156-27107275)
chr7 (19-135)||(15364713-15364829)
chr7 (19-131)||(45147325-45147437)
chr7 (15-134)||(7824669-7824788)
chr7 (19-135)||(14937120-14937236)
chr7 (15-131)||(4440697-4440813)
chr7 (19-131)||(17924424-17924536)
chr7 (15-134)||(13455516-13455635)
chr7 (19-131)||(21673918-21674030)
chr7 (22-135)||(13353926-13354039)
chr7 (15-134)||(17144643-17144762)
chr7 (15-134)||(23642217-23642336)
chr7 (15-131)||(13666307-13666423)
chr7 (79-133)||(16699-16753)
chr7 (15-125)||(26117974-26118084)
chr7 (136-184)||(11908044-11908091)
chr7 (15-133)||(15101964-15102082)
chr7 (15-133)||(15154040-15154158)
chr7 (15-133)||(19147981-19148099)
chr7 (15-133)||(20747380-20747498)
chr7 (136-164)||(6350741-6350769)
chr7 (15-63)||(6414281-6414329)
chr7 (79-119)||(9596890-9596930)
chr7 (15-107)||(14285763-14285855)
[»] chr5 (15 HSPs)
chr5 (15-134)||(21936743-21936862)
chr5 (15-134)||(24581904-24582023)
chr5 (15-134)||(23504136-23504255)
chr5 (19-134)||(27011782-27011897)
chr5 (15-134)||(25243905-25244024)
chr5 (15-134)||(25308057-25308176)
chr5 (19-134)||(19566244-19566359)
chr5 (15-133)||(23574449-23574567)
chr5 (15-131)||(23440922-23441038)
chr5 (79-133)||(18776546-18776600)
chr5 (15-133)||(20342976-20343094)
chr5 (15-133)||(37542937-37543055)
chr5 (79-133)||(21881725-21881779)
chr5 (79-119)||(23517302-23517342)
chr5 (79-133)||(25423965-25424019)
[»] chr1 (11 HSPs)
chr1 (15-134)||(20830837-20830956)
chr1 (19-131)||(22135005-22135117)
chr1 (19-117)||(21201751-21201849)
chr1 (15-130)||(19855100-19855215)
chr1 (136-183)||(14932074-14932121)
chr1 (15-133)||(20835334-20835452)
chr1 (15-133)||(37677875-37677993)
chr1 (15-131)||(20939511-20939627)
chr1 (79-131)||(21749800-21749852)
chr1 (79-133)||(22361690-22361744)
chr1 (80-133)||(16078102-16078155)
[»] scaffold0047 (1 HSPs)
scaffold0047 (15-129)||(460-574)
[»] scaffold0808 (1 HSPs)
scaffold0808 (15-134)||(430-549)
[»] scaffold0077 (2 HSPs)
scaffold0077 (15-134)||(27642-27761)
scaffold0077 (15-133)||(20818-20936)
[»] scaffold0011 (2 HSPs)
scaffold0011 (12-134)||(180732-180854)
scaffold0011 (15-131)||(195083-195199)
[»] scaffold0554 (1 HSPs)
scaffold0554 (9-134)||(3963-4088)
[»] scaffold0162 (1 HSPs)
scaffold0162 (19-134)||(13723-13838)
[»] scaffold0066 (1 HSPs)
scaffold0066 (19-134)||(46969-47084)
[»] chr4 (15 HSPs)
chr4 (19-134)||(13248429-13248544)
chr4 (19-134)||(14998100-14998215)
chr4 (15-134)||(15292531-15292650)
chr4 (19-134)||(9291619-9291734)
chr4 (15-125)||(12342247-12342356)
chr4 (26-131)||(38811698-38811803)
chr4 (29-135)||(16028905-16029010)
chr4 (16-133)||(20891763-20891880)
chr4 (79-117)||(15147015-15147053)
chr4 (79-133)||(18226560-18226614)
chr4 (82-133)||(15078482-15078533)
chr4 (15-46)||(44661327-44661358)
chr4 (79-113)||(16354579-16354613)
chr4 (79-132)||(12524520-12524573)
chr4 (15-119)||(14691682-14691786)
[»] scaffold0310 (1 HSPs)
scaffold0310 (19-135)||(14112-14228)
[»] scaffold0117 (1 HSPs)
scaffold0117 (15-131)||(803-919)
[»] scaffold0589 (1 HSPs)
scaffold0589 (15-134)||(9797-9916)
[»] scaffold0302 (1 HSPs)
scaffold0302 (19-134)||(5990-6105)
[»] scaffold0266 (1 HSPs)
scaffold0266 (19-134)||(9237-9352)
[»] scaffold0207 (1 HSPs)
scaffold0207 (19-134)||(18862-18977)
[»] scaffold0028 (1 HSPs)
scaffold0028 (19-134)||(105949-106064)
[»] scaffold0091 (1 HSPs)
scaffold0091 (19-125)||(45312-45418)
[»] scaffold0876 (1 HSPs)
scaffold0876 (9-134)||(3347-3472)
[»] scaffold0327 (1 HSPs)
scaffold0327 (15-131)||(7980-8096)
[»] scaffold0243 (1 HSPs)
scaffold0243 (15-135)||(301-421)
[»] scaffold0160 (1 HSPs)
scaffold0160 (15-131)||(8076-8192)
[»] scaffold0369 (1 HSPs)
scaffold0369 (15-134)||(273-392)
[»] scaffold0023 (2 HSPs)
scaffold0023 (19-134)||(55276-55391)
scaffold0023 (15-133)||(28749-28867)
[»] scaffold0132 (2 HSPs)
scaffold0132 (19-133)||(15471-15585)
scaffold0132 (15-74)||(44349-44408)
[»] scaffold0218 (1 HSPs)
scaffold0218 (19-134)||(3320-3435)
[»] scaffold0124 (2 HSPs)
scaffold0124 (15-134)||(7184-7304)
scaffold0124 (15-131)||(13009-13125)
[»] scaffold0610 (1 HSPs)
scaffold0610 (19-134)||(8266-8381)
[»] scaffold0235 (1 HSPs)
scaffold0235 (19-131)||(26621-26733)
[»] scaffold0387 (1 HSPs)
scaffold0387 (15-94)||(14949-15028)
[»] scaffold0058 (1 HSPs)
scaffold0058 (52-133)||(75406-75487)
[»] scaffold0205 (1 HSPs)
scaffold0205 (15-133)||(9444-9562)
[»] scaffold0042 (1 HSPs)
scaffold0042 (15-119)||(39211-39315)
[»] scaffold0501 (1 HSPs)
scaffold0501 (15-133)||(3005-3123)
[»] scaffold0198 (1 HSPs)
scaffold0198 (15-133)||(24309-24427)
[»] scaffold0106 (1 HSPs)
scaffold0106 (15-133)||(14850-14968)
[»] scaffold0081 (2 HSPs)
scaffold0081 (79-133)||(19477-19531)
scaffold0081 (79-133)||(34901-34955)
[»] scaffold0020 (2 HSPs)
scaffold0020 (15-133)||(181010-181128)
scaffold0020 (15-133)||(100929-101047)
[»] scaffold0017 (1 HSPs)
scaffold0017 (79-133)||(196855-196909)
[»] scaffold0005 (1 HSPs)
scaffold0005 (79-119)||(278221-278261)
[»] scaffold0676 (1 HSPs)
scaffold0676 (15-133)||(6825-6943)
[»] scaffold0324 (1 HSPs)
scaffold0324 (79-132)||(19380-19433)
[»] scaffold1710 (1 HSPs)
scaffold1710 (15-131)||(675-791)
[»] scaffold0403 (1 HSPs)
scaffold0403 (15-131)||(7183-7299)
[»] scaffold0012 (1 HSPs)
scaffold0012 (79-131)||(229918-229970)
[»] scaffold0093 (1 HSPs)
scaffold0093 (16-131)||(27073-27188)
[»] scaffold0546 (1 HSPs)
scaffold0546 (79-133)||(3782-3836)
[»] scaffold0540 (1 HSPs)
scaffold0540 (79-133)||(7708-7762)
[»] scaffold0507 (1 HSPs)
scaffold0507 (15-133)||(9781-9899)
[»] scaffold0375 (1 HSPs)
scaffold0375 (79-121)||(3203-3245)
[»] scaffold0358 (1 HSPs)
scaffold0358 (15-133)||(6860-6978)
[»] scaffold0293 (1 HSPs)
scaffold0293 (79-133)||(13343-13397)
[»] scaffold0109 (2 HSPs)
scaffold0109 (79-133)||(9471-9525)
scaffold0109 (79-133)||(32950-33004)
[»] scaffold0044 (1 HSPs)
scaffold0044 (79-133)||(15235-15289)
[»] scaffold0031 (1 HSPs)
scaffold0031 (79-133)||(63408-63462)
[»] scaffold0298 (2 HSPs)
scaffold0298 (15-131)||(11436-11552)
scaffold0298 (15-131)||(15206-15322)
[»] scaffold0228 (1 HSPs)
scaffold0228 (79-131)||(571-623)
[»] scaffold0034 (1 HSPs)
scaffold0034 (15-131)||(4332-4448)
[»] scaffold0026 (1 HSPs)
scaffold0026 (79-135)||(29820-29876)
[»] scaffold2094 (1 HSPs)
scaffold2094 (82-133)||(439-490)
[»] scaffold0305 (1 HSPs)
scaffold0305 (15-74)||(11437-11496)
[»] scaffold1602 (1 HSPs)
scaffold1602 (79-133)||(1444-1498)
[»] scaffold0621 (1 HSPs)
scaffold0621 (79-133)||(2342-2396)
[»] scaffold0333 (1 HSPs)
scaffold0333 (79-133)||(16530-16584)
[»] scaffold0284 (1 HSPs)
scaffold0284 (79-133)||(22742-22796)
[»] scaffold0111 (1 HSPs)
scaffold0111 (15-65)||(3364-3414)
[»] scaffold0079 (1 HSPs)
scaffold0079 (79-113)||(25849-25883)
[»] scaffold0001 (1 HSPs)
scaffold0001 (79-133)||(390577-390631)
[»] scaffold1355 (1 HSPs)
scaffold1355 (79-132)||(1551-1604)
[»] scaffold0145 (1 HSPs)
scaffold0145 (79-132)||(39389-39442)
[»] scaffold0483 (1 HSPs)
scaffold0483 (15-119)||(12305-12409)
[»] scaffold0222 (1 HSPs)
scaffold0222 (15-131)||(7871-7987)
[»] scaffold0220 (1 HSPs)
scaffold0220 (79-119)||(214-254)


Alignment Details
Target: chr6 (Bit Score: 101; Significance: 5e-50; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 23027353 - 23027233
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23027353 aaaatccataaagatactatcccacttccactccggcacaaacaacggttgcatcaaacccgacgatttctgatgttcaatcttcgacttctgacaaacc 23027254  T
Q  115 aaacaagcatagacaaactct 135  Q
    ||||||||||| |||||||||    
T  23027253 aaacaagcataaacaaactct 23027233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 15078003 - 15077884
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  15078003 aaaatccatagagatactatcccacttccactctggcacaaacaacagttgcatcaaacccgacagtttctggtgttcaatcttcgacttttgacaaacc 15077904  T
Q  115 aaacaagcatagacaaactc 134  Q
    ||||||||||| ||||||||    
T  15077903 aaacaagcatatacaaactc 15077884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 16382010 - 16381891
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  16382010 aaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgacaaacc 16381911  T
Q  115 aaacaagcatagacaaactc 134  Q
    ||||||||||| ||||||||    
T  16381910 aaacaagcataaacaaactc 16381891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 21927853 - 21927965
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||| |||||||||||||||||||||| |||||||||||||    
T  21927853 tccatagagatactatcccacttccactctggcacaaacaacggttgcatcaaactcaacggtctctgatgttcaatcttcgacttttgacaaaccaaac 21927952  T
Q  119 aagcatagacaaa 131  Q
    ||||||| |||||    
T  21927953 aagcataaacaaa 21927965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 1648451 - 1648332
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| || |||||||| ||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||    
T  1648451 aaaatccatagaaatgctatcccatttccactctggcacaaacaacggttgcatcaaacccaacggtctctgatgttcaatcttcgatttctgacaaacc 1648352  T
Q  115 aaacaagcatagacaaactc 134  Q
    ||||||||||| ||||||||    
T  1648351 aaacaagcataaacaaactc 1648332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 14624994 - 14624875
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||| ||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||    
T  14624994 aaaatcaatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttttgacaaacc 14624895  T
Q  115 aaacaagcatagacaaactc 134  Q
    ||||||||||| ||||||||    
T  14624894 aaacaagcataaacaaactc 14624875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 16233672 - 16233791
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||| || || |||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  16233672 aaaatccatggaaatgctatcccacttccactctggcacaaacaatggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgacaaacc 16233771  T
Q  115 aaacaagcatagacaaactc 134  Q
    ||||||||||| ||||||||    
T  16233772 aaacaagcataaacaaactc 16233791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 23996893 - 23997011
Alignment:
Q  16 aaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacca 115  Q
    ||||||||||| || |||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  23996893 aaatccatagaaatgctatcccatttccactctggcacaaacaatggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgacaaacca 23996992  T
Q  116 aacaagcatagacaaactc 134  Q
    |||||||||| ||||||||    
T  23996993 aacaagcataaacaaactc 23997011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 16098698 - 16098813
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    |||||||| || |||||||||||||||| | |||| |||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  16098698 tccatagaaatgctatcccacttccactctagcacgaacaacagttgcatcaaactcgacggtttctgatgttcaatcttcgacttatgacaaaccaaac 16098797  T
Q  119 aagcatagacaaactc 134  Q
    ||||||||||||||||    
T  16098798 aagcatagacaaactc 16098813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 18572299 - 18572414
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    |||||||| || ||||| |||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||    
T  18572299 tccatagaaatgctatctcacttccactctggcacaaacaacggttgcatcaaacctgacggtctctgatgttcaatcttcgatttctgacaaaccaaac 18572398  T
Q  119 aagcatagacaaactc 134  Q
    ||||||| ||||||||    
T  18572399 aagcataaacaaactc 18572414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 19 - 134
Target Start/End: Complemental strand, 18837541 - 18837426
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    |||||||| || ||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||| | || ||||||||||||||||    
T  18837541 tccatagaaatgctatcccacgtccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcattgatttctgacaaaccaaac 18837442  T
Q  119 aagcatagacaaactc 134  Q
    ||||||| ||||||||    
T  18837441 aagcataaacaaactc 18837426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 19865331 - 19865449
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||| || ||||||||||| ||||||| |||||||   || | |  ||||| ||| |  ||||||||||||||||||||||||||||||||||||    
T  19865331 aaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcaggtttctgatgttcaatcttcgacttctgacaaacc 19865430  T
Q  115 aaacaagcatagacaaact 133  Q
    ||||| | ||| |||||||    
T  19865431 aaacaggaatacacaaact 19865449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 27566617 - 27566513
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||| || ||||||||||||||||| | |||||||   || | |  ||||| ||| |  |||||||||||||||||||||||||||||||||||     
T  27566617 aaaatccatggatatactatcccacttccattctggcacatctaaagataccatcataccagcaggtttctgatgttcaatcttcgacttctgacaaact 27566518  T
Q  115 aaaca 119  Q
    |||||    
T  27566517 aaaca 27566513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 121
Target Start/End: Complemental strand, 16963018 - 16962976
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaag 121  Q
    ||||||||||| |||||||||||||||||||||| ||||||||    
T  16963018 ggtttctgatgctcaatcttcgacttctgacaaatcaaacaag 16962976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 22078263 - 22078209
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    ||||||||||| |||| ||||||||||||||||| |||||||| ||| |||||||    
T  22078263 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatacacaaact 22078209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 27331006 - 27330954
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 131  Q
    ||||||||||| |||| ||||||||||||||||| |||||||| ||| |||||    
T  27331006 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatacacaaa 27330954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 27391746 - 27391694
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 131  Q
    ||||||||||| |||| ||||||||||||||||| |||||||| ||| |||||    
T  27391746 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatacacaaa 27391694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 5838792 - 5838738
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    ||||||||||| || | ||||||||||||||||| |||||||| ||| |||||||    
T  5838792 ggtttctgatgctcgaccttcgacttctgacaaatcaaacaagaatacacaaact 5838738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 132
Target Start/End: Original strand, 15460047 - 15460097
Alignment:
Q  82 ttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaac 132  Q
    ||||||||||||||||| ||||||||||||  |||||| ||||| ||||||    
T  15460047 ttctgatgttcaatcttagacttctgacaagtcaaacacgcatacacaaac 15460097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 121
Target Start/End: Complemental strand, 18407515 - 18407473
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaag 121  Q
    ||||||||||| |||| ||||||||||||||||| ||||||||    
T  18407515 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaag 18407473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 20636874 - 20636820
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    ||||||||||| |||| |||||| |||||||||| |||||||| ||| |||||||    
T  20636874 ggtttctgatgctcaaccttcgatttctgacaaatcaaacaagaatacacaaact 20636820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 5e-50; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 23817075 - 23816955
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  23817075 aaaatccatagcgatactatcccacttccactctggcacaaacaacggttgtatcaaacctgacggtttctgatgttcaatcttcgacttctgacaaacc 23816976  T
Q  115 aaacaagcatagacaaactct 135  Q
    ||||||||||| |||||||||    
T  23816975 aaacaagcataaacaaactct 23816955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 24831218 - 24831100
Alignment:
Q  16 aaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacca 115  Q
    ||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  24831218 aaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgacaaacca 24831119  T
Q  116 aacaagcatagacaaactc 134  Q
    |||||||||| ||||||||    
T  24831118 aacaagcataaacaaactc 24831100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 22761601 - 22761481
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||||||  ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||    
T  22761601 aaaatccatagagatgatatcccacttccactctggcacaaacaacggttacatcaaacccgacggtttctgatgttcaatcttcgatttctaacaaacc 22761502  T
Q  115 aaacaagcatagacaaactct 135  Q
    ||| ||||||| |||||||||    
T  22761501 aaagaagcataaacaaactct 22761481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 25129062 - 25129178
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    |||||||||||| ||||||| ||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  25129062 tccatagagatattatcccatttccactctggcataaacaacggttgcatcaaacccgacggtttatgatattcaatcttcgacttctgacaaaccaaac 25129161  T
Q  119 aagcatagacaaactct 135  Q
    ||||||| |||||||||    
T  25129162 aagcataaacaaactct 25129178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 12640265 - 12640146
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||    
T  12640265 aaaatccatagaaatgctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatctttgatttctgacaaacc 12640166  T
Q  115 aaacaagcatagacaaactc 134  Q
    || |||| ||| ||||||||    
T  12640165 aagcaagaataaacaaactc 12640146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 22276689 - 22276808
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| || |||||||| ||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||    
T  22276689 aaaatccatagaaatgctatcccatttccattttggtacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttctatttctgacaaacc 22276788  T
Q  115 aaacaagcatagacaaactc 134  Q
    ||||||||||| ||||||||    
T  22276789 aaacaagcataaacaaactc 22276808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 19 - 134
Target Start/End: Complemental strand, 24569696 - 24569581
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    |||||||| ||  ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  24569696 tccatagaaatgttatcccacttccactctggcacaaacaacagttgcatcaaacccgacggtttctgatgttcaatcttcgatttctaacaaaccaaac 24569597  T
Q  119 aagcatagacaaactc 134  Q
    ||||||| ||||||||    
T  24569596 aagcatatacaaactc 24569581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 21906201 - 21906085
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||| |||||| |||||||| ||||||||||  || |||||||||||||||||||| |  ||||||||||||||| ||||||| |||||||||||||||    
T  21906201 aaaattcatagatatactatcacacttccactccggtacaaacaacggttgcatcaagcttgacggtttctgatgtccaatcttagacttctgacaaacc 21906102  T
Q  115 aaacaagcatagacaaa 131  Q
    | ||||||||| |||||    
T  21906101 acacaagcatacacaaa 21906085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 23107762 - 23107644
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||| || ||||||||||| ||||||| |||||||   || | |  ||||| ||| |  ||||||||||||||||||||||||||||||||||||    
T  23107762 aaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcaggtttctgatgttcaatcttcgacttctgacaaacc 23107663  T
Q  115 aaacaagcatagacaaact 133  Q
    ||||| | ||| |||||||    
T  23107662 aaacaggaatacacaaact 23107644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 21325297 - 21325194
Alignment:
Q  16 aaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacca 115  Q
    |||||||| || ||||||||||| ||||||| |||||||   || | |  ||||| ||| |  ||||||||||||||||||||||||||||||||||| |    
T  21325297 aaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcaggtttctgatgttcaatcttcgacttctgacaaacta 21325198  T
Q  116 aaca 119  Q
    ||||    
T  21325197 aaca 21325194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 1064162 - 1064280
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||||||||| |||||||||||||  || |||   ||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||||    
T  1064162 aaaatccatagagatactgtcccacttccactccggtacatctaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaacc 1064261  T
Q  115 aaacaagcatagacaaact 133  Q
    ||||| ||||| |||||||    
T  1064262 aaacaggcataaacaaact 1064280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 11357906 - 11357788
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||||||||||||||||||||||||||  || |||   ||||||  || ||| || |  || |||||||| |||| ||| ||||||||||||| |    
T  11357906 aaaatccatagagatactatcccacttccactccggtacatctaacggtgccaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaatc 11357807  T
Q  115 aaacaagcatagacaaact 133  Q
    ||||| ||||| |||||||    
T  11357806 aaacaggcataaacaaact 11357788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 22756433 - 22756379
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    |||||||||||||||||||||||||||| |||||||||||| | ||| |||||||    
T  22756433 ggtttctgatgttcaatcttcgacttcttacaaaccaaacaggaatacacaaact 22756379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 24642153 - 24642271
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| || ||||||||||||||||  ||||||  |||||||  || ||| || |  || |||||||| |||| ||| ||||||||||||  |    
T  24642153 aaaatccatagaaatgctatcccacttccactccggcacatccaacggtgccaacaaccctgcaggcttctgatgctcaaccttagacttctgacaagtc 24642252  T
Q  115 aaacaagcatagacaaact 133  Q
    ||||| |||||||||||||    
T  24642253 aaacatgcatagacaaact 24642271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 24707450 - 24707398
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 131  Q
    ||||||| ||||||||||||||||||||||||||| ||||||| ||| |||||    
T  24707450 ggtttctaatgttcaatcttcgacttctgacaaactaaacaagaatacacaaa 24707398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 21890686 - 21890634
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 131  Q
    ||||||| |||||||| ||||||||||||||||| |||||||| ||| |||||    
T  21890686 ggtttctaatgttcaaccttcgacttctgacaaatcaaacaagaatacacaaa 21890634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 23294346 - 23294462
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| || ||||||||||| ||||  ||||||  |||||||  || ||| || |  || ||||||||||||| ||| ||||||||||||  |    
T  23294346 aaaatccatagaaatgctatcccactttcactccggcacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagacttctgacaagtc 23294445  T
Q  115 aaacaagcatagacaaa 131  Q
    ||||| ||||| |||||    
T  23294446 aaacatgcatacacaaa 23294462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 23066866 - 23066920
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    ||||||||||| |||| ||||||||||||||||| |||||||  ||| |||||||    
T  23066866 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaataatacacaaact 23066920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 30210884 - 30210832
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 131  Q
    ||||||||||||||||  ||||||||||||||||  ||||| ||||| |||||    
T  30210884 ggtttctgatgttcaactttcgacttctgacaaattaaacacgcatacacaaa 30210832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 164
Target Start/End: Original strand, 35082025 - 35082053
Alignment:
Q  136 catagctctaactaacttgccacataagc 164  Q
    |||||||||||||||||||||||||||||    
T  35082025 catagctctaactaacttgccacataagc 35082053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 41608353 - 41608313
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaaca 119  Q
    ||||||||||||||||  ||||||||||||||||| |||||    
T  41608353 ggtttctgatgttcaactttcgacttctgacaaactaaaca 41608313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 45529986 - 45530038
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 131  Q
    ||||||||||||||||  ||||||||||||||||  ||||| ||||| |||||    
T  45529986 ggtttctgatgttcaactttcgacttctgacaaattaaacacgcatacacaaa 45530038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 100; Significance: 2e-49; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 24774 - 24893
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  24774 aaaatcgatagagatactatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttttgacaaacc 24873  T
Q  115 aaacaagcatagacaaactc 134  Q
    || |||||||| ||||||||    
T  24874 aatcaagcatatacaaactc 24893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 31 - 131
Target Start/End: Original strand, 72016 - 72116
Alignment:
Q  31 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 130  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  72016 ctatcccacttccactctagcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctaacaaaccaaacaagcatatacaa 72115  T
Q  131 a 131  Q
    |    
T  72116 a 72116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 31 - 125
Target Start/End: Complemental strand, 32892 - 32798
Alignment:
Q  31 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 125  Q
    |||||||||||||||| ||| |||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  32892 ctatcccacttccactctggaacaaacaatggttacatcaaacctgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaaccata 32798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 2e-49; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 22983279 - 22983398
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  22983279 aaaatccatagagatactatcccaattccactctggcacaaacaacggttgcatcaaaccctgcggtttctgatgttcaatcttcgacttctgacaaacc 22983378  T
Q  115 aaacaagcatagacaaactc 134  Q
    ||||||||||| ||||||||    
T  22983379 aaacaagcatatacaaactc 22983398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 21196437 - 21196319
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  21196437 aaaatccatagagatactatcccacctccactatggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatttttgacttctgacaaacc 21196338  T
Q  115 aaacaagcatagacaaact 133  Q
    ||||||||||| |||||||    
T  21196337 aaacaagcataaacaaact 21196319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 19 - 134
Target Start/End: Complemental strand, 20652264 - 20652149
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    |||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  20652264 tccatagagatactatcccacttccactctagcacaaacaatggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaagc 20652165  T
Q  119 aagcatagacaaactc 134  Q
    ||||||| ||||||||    
T  20652164 aagcatacacaaactc 20652149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 15 - 123
Target Start/End: Complemental strand, 23156947 - 23156839
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23156947 aaaatccatagagatactatcccacttccaatctggtacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgacttctgacaaacc 23156848  T
Q  115 aaacaagca 123  Q
    |||||||||    
T  23156847 aaacaagca 23156839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 21850272 - 21850153
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| || |||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  21850272 aaaatccatagaaatgctatcccatttccactatggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgacaaacc 21850173  T
Q  115 aaacaagcatagacaaactc 134  Q
    ||||||||||| ||||||||    
T  21850172 aaacaagcataaacaaactc 21850153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 22316041 - 22316157
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    |||||||||||| | ||||||||||||| |||||||||||||||||||||||||| ||| | ||||| ||||||||||||||||||||||||||||||||    
T  22316041 tccatagagatattgtcccacttccactctggcacaaacaacggttgcatcaaactcgatgatttctaatgttcaatcttcgacttctgacaaaccaaac 22316140  T
Q  119 aagcatagacaaactct 135  Q
    ||||||| |||||||||    
T  22316141 aagcataaacaaactct 22316157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 25282976 - 25283096
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||| ||||||||||| |||||||||  ||||||||||||||||||||||||||| ||   ||||||||||||||||| |||||||||||||||    
T  25282976 aaaatccatatagatactatcctacttccactcaggcacaaacaacggttgcatcaaaccctacatcttctgatgttcaatcttagacttctgacaaacc 25283075  T
Q  115 aaacaagcatagacaaactct 135  Q
    ||||||||||| |||||||||    
T  25283076 aaacaagcatacacaaactct 25283096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 16877030 - 16876911
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||    
T  16877030 aaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatctttgatttctgacaaacc 16876931  T
Q  115 aaacaagcatagacaaactc 134  Q
    ||  ||| ||| ||||||||    
T  16876930 aagtaagaataaacaaactc 16876911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 25283202 - 25283321
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||| ||||||||||| |||||||||  ||||||||||||||||||||||||||| ||   ||||||||||||||||| |||||||||||||||    
T  25283202 aaaatccatatagatactatcctacttccactcaggcacaaacaacggttgcatcaaaccctacatcttctgatgttcaatcttagacttctgacaaacc 25283301  T
Q  115 aaacaagcatagacaaactc 134  Q
    ||||||||||| ||||||||    
T  25283302 aaacaagcatacacaaactc 25283321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 23901138 - 23901218
Alignment:
Q  32 tatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 112  Q
    ||||||||||||| | | |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  23901138 tatcccacttccaatctagcacaaacaacggttgcatcaaacccgacgatttatgatgttcaatcttcgacttctgacaaa 23901218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 22283850 - 22283969
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||| | ||| |||| ||||||||||  || | ||||||||||||| |||||||||| |  ||||||||||||||||| ||||||||||| | |    
T  22283850 aaaatccatataaatattatctcacttccactcaggaataaacaacggttgcgtcaaacccgaagacttctgatgttcaatcttagacttctgacagatc 22283949  T
Q  115 aaacaagcatagacaaactc 134  Q
    ||||||||||| ||||||||    
T  22283950 aaacaagcatacacaaactc 22283969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 22366600 - 22366482
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||| || |||||||||||||||||||  |||||||| || ||||||||||  || |||||  ||||||| || ||||| || ||||||||||||    
T  22366600 aaaatccatcgaaatactatcccacttccactccggcacaaaaaatggttgcatcactcctgacggcatctgatgctcgatcttagatttctgacaaacc 22366501  T
Q  115 aaacaagcatagacaaact 133  Q
    ||||||||| | |||||||    
T  22366500 aaacaagcaaacacaaact 22366482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 19978813 - 19978931
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||| || ||||||||||| ||||||| |||||||   || | |  ||||| ||| |  ||||||||||||||||||||||||||||||||||||    
T  19978813 aaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcaggtttctgatgttcaatcttcgacttctgacaaacc 19978912  T
Q  115 aaacaagcatagacaaact 133  Q
    ||||| | ||| |||||||    
T  19978913 aaacaggaatacacaaact 19978931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 113
Target Start/End: Complemental strand, 16407981 - 16407883
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaac 113  Q
    ||||||||| || ||||||||||| ||||||| ||||||    |||| |  ||||| ||| |  |||||||||||||||||||||||||||||||||||    
T  16407981 aaaatccatggatatactatcccatttccactctggcacgtctaacgataccatcataccagcaggtttctgatgttcaatcttcgacttctgacaaac 16407883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 21166473 - 21166355
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||| || ||| ||||||||||||||| |||||||   || | |  ||||| ||| |  | |||||||||||||||||||||||||||| |||||    
T  21166473 aaaatccatggatatattatcccacttccactctggcacatctaaagataccatcataccagcggatttctgatgttcaatcttcgacttctgataaacc 21166374  T
Q  115 aaacaagcatagacaaact 133  Q
    ||||| | ||| |||||||    
T  21166373 aaacaggaatacacaaact 21166355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 21393800 - 21393682
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||| || ||||||||||| ||||||| |||||||   |||  |  ||||| ||| |  ||||||||||| |||| |||||||||||| |||| |    
T  21393800 aaaatccatggatatactatcccatttccactatggcacatctaaccataccatcataccagcaggtttctgatgctcaaccttcgacttctggcaaatc 21393701  T
Q  115 aaacaagcatagacaaact 133  Q
    ||||||||||| |||||||    
T  21393700 aaacaagcatacacaaact 21393682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 21788294 - 21788176
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||| || ||||||||||| ||||||| |||||||   |||  |  ||||| ||| |  ||||||||||| |||| |||||||||||| |||| |    
T  21788294 aaaatccatggatatactatcccatttccactatggcacatctaaccataccatcataccagcaggtttctgatgctcaaccttcgacttctggcaaatc 21788195  T
Q  115 aaacaagcatagacaaact 133  Q
    ||||||||||| |||||||    
T  21788194 aaacaagcatacacaaact 21788176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 30313015 - 30312961
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | |||||||||||    
T  30313015 ggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatagacaaact 30312961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 21251851 - 21251905
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    ||||||||||| |||| ||||||||||||||||| |||||||| ||| |||||||    
T  21251851 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatatacaaact 21251905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 21043355 - 21043407
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 131  Q
    ||||||||||| |||| |||||| ||||||||||||||||||| ||| |||||    
T  21043355 ggtttctgatgctcaaccttcgatttctgacaaaccaaacaagaatacacaaa 21043407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 22040771 - 22040823
Alignment:
Q  81 tttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    ||||||||| ||||||||||||||||||||||| ||||| | ||| |||||||    
T  22040771 tttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaact 22040823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 22365749 - 22365694
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatca 70  Q
    ||||||||| || ||| |||||||||||||||  ||||||||||| ||||||||||    
T  22365749 aaaatccatcgaaatattatcccacttccactccggcacaaacaatggttgcatca 22365694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 46
Target Start/End: Complemental strand, 29303360 - 29303330
Alignment:
Q  16 aaatccatagagatactatcccacttccact 46  Q
    |||||||||||||||||||||||||||||||    
T  29303360 aaatccatagagatactatcccacttccact 29303330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 15534290 - 15534330
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaaca 119  Q
    ||||||||||| |||||||| |||||||||||||| |||||    
T  15534290 ggtttctgatgctcaatctttgacttctgacaaactaaaca 15534330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0567 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 10105 - 10221
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  10105 aaaatccatagagatactatcccacttccacactggcacaaacaacggttgcatcaaaccctacggtttctgatgttcaatcttcgatttctgacaaacc 10204  T
Q  115 aaacaagcatagacaaa 131  Q
    ||||||||||| |||||    
T  10205 aaacaagcataaacaaa 10221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 1e-47; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 17193503 - 17193623
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||| |    
T  17193503 aaaatccatagagatactatcccacttccactctggcacaaacaacatttgcatcaaacccgatggtttctgatgttcaatcttcgacttctgacaaatc 17193602  T
Q  115 aaacaagcatagacaaactct 135  Q
    ||||||||||| |||||||||    
T  17193603 aaacaagcataaacaaactct 17193623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 30138215 - 30138334
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  30138215 aaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgacaaacc 30138314  T
Q  115 aaacaagcatagacaaactc 134  Q
    ||||||||||| ||||||||    
T  30138315 aaacaagcataaacaaactc 30138334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 30147766 - 30147885
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  30147766 aaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgacaaacc 30147865  T
Q  115 aaacaagcatagacaaactc 134  Q
    ||||||||||| ||||||||    
T  30147866 aaacaagcataaacaaactc 30147885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 6152582 - 6152463
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||     
T  6152582 aaaatccatagagatactatcccacttccactcaagcacaaacaacggttgcatcaaacccgacggtctttgatgttcaatcttcgacttctgacaaact 6152483  T
Q  115 aaacaagcatagacaaactc 134  Q
    |||||| |||| ||||||||    
T  6152482 aaacaaacataaacaaactc 6152463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 13967071 - 13966952
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||| ||| | ||||||||||||||||| ||||||||||||    
T  13967071 aaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgatggtctttgatgttcaatcttcgatttctgacaaacc 13966972  T
Q  115 aaacaagcatagacaaactc 134  Q
    ||||||||||| ||||||||    
T  13966971 aaacaagcataaacaaactc 13966952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 16257553 - 16257672
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| ||  ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||    
T  16257553 aaaatccatagaaatgttatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgatcaatcttcgatttctgacaaacc 16257652  T
Q  115 aaacaagcatagacaaactc 134  Q
    ||||||||||| ||||||||    
T  16257653 aaacaagcataaacaaactc 16257672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 16742434 - 16742315
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| || |||| ||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||    
T  16742434 aaaatccatagaaatgctattccacttccactctggcacaaacaacggttgcatcaaacctgacggtctctgatgttcaatcttcgatttctgacaaacc 16742335  T
Q  115 aaacaagcatagacaaactc 134  Q
    ||||||||||| ||||||||    
T  16742334 aaacaagcataaacaaactc 16742315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 6712136 - 6712024
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    ||||| |||||| ||||||||||||||| |||||||||||||  ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  6712136 tccattgagatattatcccacttccactctggcacaaacaacaattgcatcaaacccgacgatttctgatgttcaatcttagacttctgacaaaccaaac 6712037  T
Q  119 aagcatagacaaa 131  Q
    ||||||| |||||    
T  6712036 aagcataaacaaa 6712024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 8274130 - 8274011
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| || |||||||||||||||| ||||||||| || ||||||||||||||||||||| |||||||||||||||| || ||||||||||||    
T  8274130 aaaatccatagaaatgctatcccacttccactctggcacaaagaatggttgcatcaaacccgacggtctctgatgttcaatctttgatttctgacaaacc 8274031  T
Q  115 aaacaagcatagacaaactc 134  Q
    || |||| ||| ||||||||    
T  8274030 aagcaagaataaacaaactc 8274011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 18749078 - 18749190
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    ||||||||||||||||| || ||||||| ||||| ||||||||||||||||||| |||||||||| || ||||||||||||||||||| |||||||||||    
T  18749078 tccatagagatactatctcatttccactctggcaaaaacaacggttgcatcaaaaccgacggtttatgttgttcaatcttcgacttctaacaaaccaaac 18749177  T
Q  119 aagcatagacaaa 131  Q
    ||| ||| |||||    
T  18749178 aagaataaacaaa 18749190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 15095434 - 15095534
Alignment:
Q  35 cccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaactc 134  Q
    |||||||||||   |||||||||||||||||||||||||||||||  || |||||||||||||||||||| ||| |||||||||||||||| ||||||||    
T  15095434 cccacttccacgcaggcacaaacaacggttgcatcaaacccgacgacttttgatgttcaatcttcgacttttgaaaaaccaaacaagcatacacaaactc 15095533  T
Q  135 t 135  Q
    |    
T  15095534 t 15095534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 267026 - 266907
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||| |||||| ||| |||||||||||||||  || |||||||| ||||||||||||||| | |  || || |||||||||||||||||||||||||||    
T  267026 aaaattcatagaaatattatcccacttccactccggtacaaacaatggttgcatcaaacccaatgacttttggtgttcaatcttcgacttctgacaaacc 266927  T
Q  115 aaacaagcatagacaaactc 134  Q
    ||||||||||| ||||||||    
T  266926 aaacaagcatacacaaactc 266907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 56 - 134
Target Start/End: Original strand, 15610554 - 15610632
Alignment:
Q  56 acaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaactc 134  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||| ||| ||||    
T  15610554 acaacggttgcatcaaacccgatggtctctgatgttcaatcttcgatttctgacaaaccaaacaagcataaacagactc 15610632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 16371812 - 16371930
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||| || ||||||||||| ||||||| |||||||   || | |  ||||| ||| |  |||||||||||||||||||||||||||||||||||     
T  16371812 aaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcaggtttctgatgttcaatcttcgacttctgacaaact 16371911  T
Q  115 aaacaagcatagacaaact 133  Q
    ||||||| ||| |||||||    
T  16371912 aaacaagaatacacaaact 16371930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 12498647 - 12498763
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| ||||||||||| ||||| | |||||||   |||| |  ||||| ||| |  ||||||||||||| |||||||||||||||||||||     
T  12498647 aaaatccatagatatactatcccatttccattctggcacatctaacgataccatcataccagcaggtttctgatgtttaatcttcgacttctgacaaact 12498746  T
Q  115 aaacaagcatagacaaa 131  Q
    ||||||| ||| |||||    
T  12498747 aaacaagaatacacaaa 12498763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 15062207 - 15062261
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||    
T  15062207 ggtttctgatgttcaatcttcgacttctgacaaactaaacaagaatacacaaact 15062261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 9523118 - 9523236
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||| || ||||||||||| ||||||| |||||||   || |||  ||||| ||| |  ||||||||||| ||||  |||||||||||||||| |    
T  9523118 aaaatccatggatatactatcccatttccactctggcacatctaatggtatcatcataccagcaggtttctgatgctcaactttcgacttctgacaaatc 9523217  T
Q  115 aaacaagcatagacaaact 133  Q
    ||||||| ||| |||||||    
T  9523218 aaacaagaatacacaaact 9523236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 16491912 - 16491794
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||| || ||| ||||||| ||||||| |||||||   |||| |  ||||| ||| |  ||||||||||| |||| ||||||||||||||||| |    
T  16491912 aaaatccatggatatattatcccatttccactctggcacatctaacgataccatcataccagcaggtttctgatgctcaaccttcgacttctgacaaatc 16491813  T
Q  115 aaacaagcatagacaaact 133  Q
    ||||||| ||| |||||||    
T  16491812 aaacaagaatacacaaact 16491794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 14876229 - 14876111
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||| || ||||||||||| ||||||| |||||||   || | |  ||||| ||| |  ||||||||||||||||||||| |||||||| ||||     
T  14876229 aaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcaggtttctgatgttcaatcttcaacttctgataaact 14876130  T
Q  115 aaacaagcatagacaaact 133  Q
    ||||| | ||| |||||||    
T  14876129 aaacaggaatacacaaact 14876111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 16692627 - 16692681
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | ||| |||||||    
T  16692627 ggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaact 16692681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 16806593 - 16806539
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | ||| |||||||    
T  16806593 ggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaact 16806539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 21764385 - 21764301
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgact 103  Q
    |||||||||||| |||| || ||||| ||||| ||||||||| ||||| | ||||| ||||  |||| |||||||||||| ||||    
T  21764385 tccatagagatattatctcatttccattttggaacaaacaactgttgccttaaaccagacgacttctaatgttcaatctttgact 21764301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 11658561 - 11658518
Alignment:
Q  137 atagctctaactaacttgccacataagcatgtaaaactgttatg 180  Q
    ||||||||||||||||||||||||||  ||||| ||||||||||    
T  11658561 atagctctaactaacttgccacataaaaatgtacaactgttatg 11658518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 79 - 118
Target Start/End: Complemental strand, 14126261 - 14126222
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  14126261 ggtttctgatgctcaatcttcgacttctgacaaactaaac 14126222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 15209354 - 15209408
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    ||||||||||| ||||| |||||||||||||||| |||||| | ||| |||||||    
T  15209354 ggtttctgatgctcaattttcgacttctgacaaatcaaacaggaatacacaaact 15209408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 17490313 - 17490367
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    ||||||||||| |||| |||||| |||||||||| |||||||| ||| |||||||    
T  17490313 ggtttctgatgctcaaccttcgatttctgacaaatcaaacaagaatacacaaact 17490367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 18134066 - 18133950
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||| || || ||||||||||||||||  ||||||  |||||||  || ||| || |  || |||| |||||||| ||| ||||||||||||  |    
T  18134066 aaaatccattgaaatgctatcccacttccactccggcacatccaacggtgtcaacaaccctgcaggcttctaatgttcaaccttagacttctgacaagtc 18133967  T
Q  115 aaacaagcatagacaaa 131  Q
    ||||| ||||| |||||    
T  18133966 aaacatgcatacacaaa 18133950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 96; Significance: 5e-47; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 3370 - 3251
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  3370 aaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgacaaacc 3271  T
Q  115 aaacaagcatagacaaactc 134  Q
    ||||||||||| ||||||||    
T  3270 aaacaagcataaacaaactc 3251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 96; Significance: 5e-47; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 24205 - 24324
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  24205 aaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgacaaacc 24304  T
Q  115 aaacaagcatagacaaactc 134  Q
    ||||||||||| ||||||||    
T  24305 aaacaagcataaacaaactc 24324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 96; Significance: 5e-47; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 41069 - 41188
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  41069 aaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgacaaacc 41168  T
Q  115 aaacaagcatagacaaactc 134  Q
    ||||||||||| ||||||||    
T  41169 aaacaagcataaacaaactc 41188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 56394 - 56277
Alignment:
Q  16 aaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacca 115  Q
    ||||||||||| || ||||| ||||||||||  ||||||  |||||||  || ||| || |  || |||||||||||||  || ||||||||||||  ||    
T  56394 aaatccatagaaatgctatctcacttccactccggcacatccaacggtgtcaacaaccctgcaggcttctgatgttcaactttagacttctgacaagtca 56295  T
Q  116 aacaagcatagacaaact 133  Q
    |||| ||||| |||||||    
T  56294 aacatgcatacacaaact 56277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 96; Significance: 5e-47; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 24695 - 24810
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    |||||||||||| ||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695 tccatagagatattatcccacttccactctggtacaaacaacgattgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 24794  T
Q  119 aagcatagacaaactc 134  Q
    ||||||| ||||||||    
T  24795 aagcatacacaaactc 24810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 232370 - 232486
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    ||||||||||||||||||||||||||||  | ||||||||| ||||||||||||| |||||  || |||||||||||||| ||||||| |||||||||||    
T  232370 tccatagagatactatcccacttccactccgacacaaacaatggttgcatcaaactcgacgacttttgatgttcaatctttgacttctaacaaaccaaac 232469  T
Q  119 aagcatagacaaactct 135  Q
    ||||||| |||||||||    
T  232470 aagcatacacaaactct 232486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 96; Significance: 5e-47; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 27107275 - 27107156
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  27107275 aaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgacaaacc 27107176  T
Q  115 aaacaagcatagacaaactc 134  Q
    ||||||||||| ||||||||    
T  27107175 aaacaagcataaacaaactc 27107156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 15364713 - 15364829
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  15364713 tccatagagttgctatcccacttccactttggcacaaacaacggttgcatcaaacctgacggtttctgatgttcaatcttcgacttatgacaaaccaaac 15364812  T
Q  119 aagcatagacaaactct 135  Q
     |||||| |||||||||    
T  15364813 tagcataaacaaactct 15364829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 45147325 - 45147437
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    |||||||||||  ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45147325 tccatagagatgttatcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 45147424  T
Q  119 aagcatagacaaa 131  Q
    ||||||| |||||    
T  45147425 aagcataaacaaa 45147437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 7824669 - 7824788
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| ||  ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  7824669 aaaatccatagaaatgttatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgacaaacc 7824768  T
Q  115 aaacaagcatagacaaactc 134  Q
    ||||||||||| ||||||||    
T  7824769 aaacaagcataaacaaactc 7824788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 14937120 - 14937236
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  14937120 tccatagagttgctatcccacttccactgtggcacaaacaacggttgcatcaaacctgacggtttctgatgttcaatcttcgacttatgacaaaccaaac 14937219  T
Q  119 aagcatagacaaactct 135  Q
     |||||| |||||||||    
T  14937220 tagcataaacaaactct 14937236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 4440697 - 4440813
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||  |||||||||||||||||||| |||||||||||||||||    
T  4440697 aaaatccatagagatattatcccacttccactctggcacaaataacggttgcatcaaaccgtacggtttctgatgttcaatcgtcgacttctgacaaacc 4440796  T
Q  115 aaacaagcatagacaaa 131  Q
    | ||||||||| |||||    
T  4440797 atacaagcatatacaaa 4440813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 17924424 - 17924536
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    ||||||||||||||||| ||||| |||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |    
T  17924424 tccatagagatactatctcactttcactctggctcaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgacttctgacaaacaaagc 17924523  T
Q  119 aagcatagacaaa 131  Q
    ||||||| |||||    
T  17924524 aagcataaacaaa 17924536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 13455516 - 13455635
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||||||||||||||| || ||||| | ||| |||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||    
T  13455516 aaaatccatagagatactatctcatttccattctggaacaaacaacggttgcatcaaacctaacggtttctgatgttcaaccttcgacttctgacaaacc 13455615  T
Q  115 aaacaagcatagacaaactc 134  Q
    || |||||||| ||||||||    
T  13455616 aagcaagcataaacaaactc 13455635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 21674030 - 21673918
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    ||||||||||||||||| |||||||||| | |||||| |||||||||||||||||| |||||| | ||||||||||||||||| |||||||||||||| |    
T  21674030 tccatagagatactatctcacttccactctagcacaatcaacggttgcatcaaacctgacggtctttgatgttcaatcttcgatttctgacaaaccaagc 21673931  T
Q  119 aagcatagacaaa 131  Q
    ||||||| |||||    
T  21673930 aagcataaacaaa 21673918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 13353926 - 13354039
Alignment:
Q  22 atagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaag 121  Q
    ||||||||||| | ||| ||||| | ||  ||||||||||||||||||||||| || | |||||||||||||||||| ||||||| ||||||||||||||    
T  13353926 atagagatactgttccatttccattatgaaacaaacaacggttgcatcaaacctgatgatttctgatgttcaatcttagacttctaacaaaccaaacaag 13354025  T
Q  122 catagacaaactct 135  Q
    |||| |||||||||    
T  13354026 cataaacaaactct 13354039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 17144762 - 17144643
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||| |||||| ||  ||| |||||||||||  || |||||||||| ||||||||||||||| || |||||||||| |||||| ||||| ||||||| |    
T  17144762 aaaattcatagatatgttattccacttccactccggtacaaacaacgattgcatcaaacccgatggcttctgatgttaaatcttagacttttgacaaatc 17144663  T
Q  115 aaacaagcatagacaaactc 134  Q
    ||||||||||| ||||||||    
T  17144662 aaacaagcatacacaaactc 17144643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 23642217 - 23642336
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac-aaac 113  Q
    ||||| |||||| ||| |||||||||||||||  || |||||||||||||| |||||||| ||||  |||||||||||||| || ||||| |||| |||     
T  23642217 aaaatacatagaaatattatcccacttccactcagggacaaacaacggttgaatcaaacctgacgacttctgatgttcaatgttagactt-tgacaaaat 23642315  T
Q  114 caaacaagcatagacaaactc 134  Q
    |||||||||||| ||||||||    
T  23642316 caaacaagcatacacaaactc 23642336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 13666307 - 13666423
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| || ||||||||||||||||  ||||||  || ||||  || ||| || |  || ||||||||||||| ||||||||||||||||  |    
T  13666307 aaaatccatagaaatgctatcccacttccactccggcacatccatcggtgtcaacaaccctgcaggcttctgatgttcaaccttcgacttctgacaagtc 13666406  T
Q  115 aaacaagcatagacaaa 131  Q
    ||||| ||||| |||||    
T  13666407 aaacatgcatacacaaa 13666423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 16753 - 16699
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | ||| |||||||    
T  16753 ggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaact 16699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 26118084 - 26117974
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||||||||||||||||||||||||||  || |||   ||||||  || ||| ||||  || |||||||| |||| ||| ||||||||||| | |    
T  26118084 aaaatccatagagatactatcccacttccactccggtacatctaacggtgtcaacaaccccgcaggcttctgatgctcaaccttggacttctgacagatc 26117985  T
Q  115 aaacaagcata 125  Q
    ||||| |||||    
T  26117984 aaacaggcata 26117974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 11908044 - 11908091
Alignment:
Q  136 catagctctaactaacttgccacataagcatgtaaaactgttatgacag 184  Q
    ||||||||||||||||||||||| ||||||||||| | |||||||||||    
T  11908044 catagctctaactaacttgccacgtaagcatgtaata-tgttatgacag 11908091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 15102082 - 15101964
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| ||  | |||||||||||||  ||||||  |||||||  || ||| || |  || |||||||| |||| ||| ||||||||||||  |    
T  15102082 aaaatccatagaaatgttgtcccacttccactccggcacatccaacggtgtcaacaaccctgcaggcttctgatgctcaaccttagacttctgacaagtc 15101983  T
Q  115 aaacaagcatagacaaact 133  Q
    ||||| |||||||||||||    
T  15101982 aaacatgcatagacaaact 15101964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 15154158 - 15154040
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||| || ||||||||||| ||||||| |||||||   || | |  ||||| ||| |  | ||||||||| ||||  |||||||||||||||| |    
T  15154158 aaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcagatttctgatgctcaactttcgacttctgacaaatc 15154059  T
Q  115 aaacaagcatagacaaact 133  Q
    ||||||| ||| |||||||    
T  15154058 aaacaagaatacacaaact 15154040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 19147981 - 19148099
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||| || || |||||||||||||| | |||||||  |||||||  || ||| || |  || |||||||| |||| ||| ||||||||||||  |    
T  19147981 aaaatccatggaaatgctatcccacttccattctggcacatccaacggtgtcaacaaccctgcaggcttctgatgctcaaccttagacttctgacaagtc 19148080  T
Q  115 aaacaagcatagacaaact 133  Q
    ||||| ||||| |||||||    
T  19148081 aaacatgcataaacaaact 19148099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 20747380 - 20747498
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||| || || |||||||||||||| | |||||||  |||||||  || ||| || |  || |||||||| |||| ||| ||||||||||||  |    
T  20747380 aaaatccatggaaatgctatcccacttccattctggcacatccaacggtgtcaacaaccctgcaggcttctgatgctcaaccttagacttctgacaagtc 20747479  T
Q  115 aaacaagcatagacaaact 133  Q
    ||||| ||||| |||||||    
T  20747480 aaacatgcataaacaaact 20747498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 164
Target Start/End: Original strand, 6350741 - 6350769
Alignment:
Q  136 catagctctaactaacttgccacataagc 164  Q
    |||||||||||||||||||||||||||||    
T  6350741 catagctctaactaacttgccacataagc 6350769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 6414281 - 6414329
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggt 63  Q
    |||||||||||| |||||||||||||||||||  ||||||  |||||||    
T  6414281 aaaatccatagaaatactatcccacttccactccggcacatccaacggt 6414329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 9596890 - 9596930
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaaca 119  Q
    ||||||| ||| ||||||||||||||||||||||| |||||    
T  9596890 ggtttctaatgctcaatcttcgacttctgacaaactaaaca 9596930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 14285855 - 14285763
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctg 107  Q
    |||||||||||| ||||| |||||||||||||  ||||||  |||||||  || ||| || |  || ||||||||||||| ||| ||||||||    
T  14285855 aaaatccatagaaatactgtcccacttccactccggcacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagacttctg 14285763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 5e-47; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 21936862 - 21936743
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  21936862 aaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgacaaacc 21936763  T
Q  115 aaacaagcatagacaaactc 134  Q
    ||||||||||| ||||||||    
T  21936762 aaacaagcataaacaaactc 21936743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 24581904 - 24582023
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||    
T  24581904 aaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatctttgatttctgacaaacc 24582003  T
Q  115 aaacaagcatagacaaactc 134  Q
    ||||||||||| ||||||||    
T  24582004 aaacaagcataaacaaactc 24582023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 23504136 - 23504255
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||| ||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||| || |||||||||    
T  23504136 aaaatccataaagatactatcccaattccactctggcacaaacaacagttgcatcaaacccgacggtctctgatgttcaatcttcgatttttgacaaacc 23504235  T
Q  115 aaacaagcatagacaaactc 134  Q
    ||||||||||| ||||||||    
T  23504236 aaacaagcataaacaaactc 23504255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 27011782 - 27011897
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    |||||||| || ||||| |||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||    
T  27011782 tccatagaaatgctatctcacttccactctggcacaaacaacggttgcatcaaacccgacgttctctgatgttcaatcttcgatttctgacaaaccaaac 27011881  T
Q  119 aagcatagacaaactc 134  Q
    ||||||| ||||||||    
T  27011882 aagcataaacaaactc 27011897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 25244024 - 25243905
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||| ||||| |||  ||||| |||||||| | |||||||||||||||||||||||||||| |  ||||||||||||||||| ||||||||||||| |    
T  25244024 aaaatctatagaaataagatcccgcttccactctagcacaaacaacggttgcatcaaacccgatgacttctgatgttcaatcttagacttctgacaaatc 25243925  T
Q  115 aaacaagcatagacaaactc 134  Q
    ||||||||||  ||||||||    
T  25243924 aaacaagcatgcacaaactc 25243905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 25308176 - 25308057
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||| ||||| |||  ||||| |||||||| | |||||||||||||||||||||||||||| |  ||||||||||||||||| ||||||||||||| |    
T  25308176 aaaatctatagaaataagatcccgcttccactctagcacaaacaacggttgcatcaaacccgatgacttctgatgttcaatcttagacttctgacaaatc 25308077  T
Q  115 aaacaagcatagacaaactc 134  Q
    ||||||||||  ||||||||    
T  25308076 aaacaagcatgcacaaactc 25308057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 19 - 134
Target Start/End: Complemental strand, 19566359 - 19566244
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    ||||| || ||||||||||| ||||||| |||||||||||||||||||||||   | ||||| |||||||| |||||||| || ||||||||||| ||||    
T  19566359 tccatcgaaatactatcccaattccactctggcacaaacaacggttgcatcatttcagacggcttctgatgctcaatcttagatttctgacaaacgaaac 19566260  T
Q  119 aagcatagacaaactc 134  Q
    || |||| | ||||||    
T  19566259 aatcatacaaaaactc 19566244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 23574449 - 23574567
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||| || ||||||||||| ||||||| |||||||   || | |  ||||| ||| |  |||||||||||||||||||||||||||||||||||     
T  23574449 aaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcaggtttctgatgttcaatcttcgacttctgacaaact 23574548  T
Q  115 aaacaagcatagacaaact 133  Q
    ||||| | ||| |||||||    
T  23574549 aaacaggaatacacaaact 23574567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 23440922 - 23441038
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||| || ||||||||||| ||||||| |||||||   || | |  ||||| ||| |  |||||||||||||||||||||||||| ||||||||     
T  23440922 aaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcaggtttctgatgttcaatcttcgacttatgacaaact 23441021  T
Q  115 aaacaagcatagacaaa 131  Q
    ||||||| ||| |||||    
T  23441022 aaacaagaatacacaaa 23441038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 18776546 - 18776600
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||| |||||||    
T  18776546 ggtttctgatgctcaatcttcgacttctgacaaactaaacaagaatacacaaact 18776600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 20342976 - 20343094
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||||||||| |||||||||||||  || ||   |||||||  || ||| || |  || ||||||||||||| ||| ||||||||||||| |    
T  20342976 aaaatccatagagatactgtcccacttccactccggtacgtccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttggacttctgacaaatc 20343075  T
Q  115 aaacaagcatagacaaact 133  Q
    ||||| ||||| |||||||    
T  20343076 aaacaggcataaacaaact 20343094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 37543055 - 37542937
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||||||| | ||||||||||||| ||| |||   ||||||  || ||| || |  || |||||||| |||| ||| |||||||||||||||    
T  37543055 aaaatccatagagataatgtcccacttccactctggtacatctaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaacc 37542956  T
Q  115 aaacaagcatagacaaact 133  Q
    ||||| ||||| |||||||    
T  37542955 aaacaggcataaacaaact 37542937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 21881725 - 21881779
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    |||||||||||||||||||| |||||||||||||| ||||| | ||| |||||||    
T  21881725 ggtttctgatgttcaatctttgacttctgacaaactaaacaggaatacacaaact 21881779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 23517302 - 23517342
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaaca 119  Q
    ||||||||||||||||||||| ||||||||||||| |||||    
T  23517302 ggtttctgatgttcaatcttcaacttctgacaaactaaaca 23517342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 25423965 - 25424019
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    ||||||||||| |||| |||||| |||||||||| |||||||| ||| |||||||    
T  25423965 ggtttctgatgctcaaccttcgatttctgacaaatcaaacaagaatacacaaact 25424019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 5e-47; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 20830956 - 20830837
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  20830956 aaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgacaaacc 20830857  T
Q  115 aaacaagcatagacaaactc 134  Q
    ||||||||||| ||||||||    
T  20830856 aaacaagcataaacaaactc 20830837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 22135117 - 22135005
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    |||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||    
T  22135117 tccatagagatactatcccacttctactgtggcacaaacaacagttgcatcaaacccgacggttttttatgttcaatcttcaacttctgacaaaccaaac 22135018  T
Q  119 aagcatagacaaa 131  Q
    ||||||| |||||    
T  22135017 aagcataaacaaa 22135005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 21201849 - 21201751
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaa 117  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||| || |||||||||||||| |||||||||| ||||| ||||    
T  21201849 tccatagagatactatcccacttccactctggcacaaacaatggttgcatcaaactcgatggcttctgatgttcaattttcgacttctaacaaatcaaa 21201751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 130
Target Start/End: Original strand, 19855100 - 19855215
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| || |||||||||||||||| |||||||  |||||||  || ||| ||||  || |||||||| |||| ||| ||||||||||||  |    
T  19855100 aaaatccatagaaatgctatcccacttccactctggcacatccaacggtgtcaacaaccccgcaggcttctgatgctcaaccttagacttctgacaagtc 19855199  T
Q  115 aaacaagcatagacaa 130  Q
    ||||| ||||| ||||    
T  19855200 aaacatgcatacacaa 19855215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 14932121 - 14932074
Alignment:
Q  136 catagctctaactaacttgccacataagcatgtaaaactgttatgaca 183  Q
    |||| ||| ||||||||||||||||||||||||| |||||||||||||    
T  14932121 cataactcgaactaacttgccacataagcatgtacaactgttatgaca 14932074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 20835452 - 20835334
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| || ||||||||||||||||  ||||||  |||||||  || ||| || |  || ||||||||||||| ||| ||| ||||||||  |    
T  20835452 aaaatccatagaaatgctatcccacttccactccggcacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagacatctgacaagtc 20835353  T
Q  115 aaacaagcatagacaaact 133  Q
    ||||| ||||| |||||||    
T  20835352 aaacatgcatacacaaact 20835334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 37677875 - 37677993
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||||||||||||||||||||||||||  || |||   ||||||  || ||| || |  || |||||||| |||| ||| ||||||||||| | |    
T  37677875 aaaatccatagagatactatcccacttccactccggtacatctaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacagatc 37677974  T
Q  115 aaacaagcatagacaaact 133  Q
    ||||| ||||| |||||||    
T  37677975 aaacaggcataaacaaact 37677993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 20939627 - 20939511
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| |||  ||||||||||||||  ||||||  |||||||  || ||| || |  || ||||||||||||| ||| ||||||||||||  |    
T  20939627 aaaatccatagaaataaaatcccacttccactccggcacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagacttctgacaagtc 20939528  T
Q  115 aaacaagcatagacaaa 131  Q
    ||||| ||||| |||||    
T  20939527 aaacatgcatacacaaa 20939511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 21749800 - 21749852
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 131  Q
    ||||||||||| |||| ||||||||||||||||| |||||||| ||| |||||    
T  21749800 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatacacaaa 21749852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 22361744 - 22361690
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    ||||||||||| |||| |||||| |||||||||| |||||||| ||| |||||||    
T  22361744 ggtttctgatgctcaaccttcgatttctgacaaatcaaacaagaatacacaaact 22361690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 16078155 - 16078102
Alignment:
Q  80 gtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    |||||||||| |||||||||||||||||||| || ||||| | ||| |||||||    
T  16078155 gtttctgatgctcaatcttcgacttctgacagactaaacaggaatacacaaact 16078102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 15 - 129
Target Start/End: Original strand, 460 - 574
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||    
T  460 aaaatccatagaaatactatcccacttccactctggcacaaacaacggttgcatcaaactcgacggtctctgatgttcaatcttcgacttttgacaaacc 559  T
Q  115 aaacaagcatagaca 129  Q
    |||||||||||||||    
T  560 aaacaagcatagaca 574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 549 - 430
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| || | |||||||    
T  549 aaaatccatagagatactatcccactttcactctggcacaaacaagggttgcatcaaacccgacggtttctgatgttcaatcttcgattttttacaaacc 450  T
Q  115 aaacaagcatagacaaactc 134  Q
    ||||||||||| ||||||||    
T  449 aaacaagcatatacaaactc 430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 27761 - 27642
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||    
T  27761 aaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatctttgatttctgacaaacc 27662  T
Q  115 aaacaagcatagacaaactc 134  Q
    ||||||||||| ||||||||    
T  27661 aaacaagcataaacaaactc 27642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 20936 - 20818
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| || || ||||| |||||||  ||||||  |||||||  || ||| || |  || |||||||| |||| ||| ||||||||||||  |    
T  20936 aaaatccatagaaatgctgtcccatttccactccggcacatccaacggtgtcaacaaccctgcaggcttctgatgctcaaccttagacttctgacaagtc 20837  T
Q  115 aaacaagcatagacaaact 133  Q
    ||||| |||||||||||||    
T  20836 aaacacgcatagacaaact 20818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 91; Significance: 5e-44; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 12 - 134
Target Start/End: Original strand, 180732 - 180854
Alignment:
Q  12 aagaaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaa 111  Q
    |||||| |||||||| ||  ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  180732 aagaaagtccatagaaatgttatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgacaa 180831  T
Q  112 accaaacaagcatagacaaactc 134  Q
    |||||||||||||| ||||||||    
T  180832 accaaacaagcataaacaaactc 180854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 195199 - 195083
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| || |||||| |||||||||  ||||||  |||||||  || ||| || |  || ||||||||||||| ||| ||||||||||||  |    
T  195199 aaaatccatagaaatgctatccaacttccactccggcacatccaacggtgtcaacaaccctgtaggcttctgatgttcaaccttagacttctgacaagtc 195100  T
Q  115 aaacaagcatagacaaa 131  Q
    ||||| ||||| |||||    
T  195099 aaacatgcatacacaaa 195083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 3963 - 4088
Alignment:
Q  9 tcgaagaaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctga 108  Q
    ||||| |||||||||||| || |||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||    
T  3963 tcgaacaaaatccatagaaatgctatcccacttccactctggcacgaacaacggttgcatcaaacctgacggtttctgatgttcaatcttcgacttcgga 4062  T
Q  109 caaaccaaacaagcatagacaaactc 134  Q
    ||||||| ||||||||| ||||||||    
T  4063 caaaccagacaagcatatacaaactc 4088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 13723 - 13838
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| | |||||||||||| ||||||||||||||||    
T  13723 tccatagaaatactatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgttattcaatcttcgatttctgacaaaccaaac 13822  T
Q  119 aagcatagacaaactc 134  Q
    ||||||| ||||||||    
T  13823 aagcataaacaaactc 13838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 46969 - 47084
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    |||||||| || ||||||||||||||||  |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  46969 tccatagaaatgctatcccacttccactcaggcacaaacaacggttgcatgaaacccgacggtctctgatgttcaatcttcgacttctgacaaaccaaac 47068  T
Q  119 aagcatagacaaactc 134  Q
    ||||||| ||||||||    
T  47069 aagcataaacaaactc 47084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 3e-42; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 13248429 - 13248544
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    |||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||    
T  13248429 tccatagaaatacaatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatattcaatcttcgatttctgacaaaccaaac 13248528  T
Q  119 aagcatagacaaactc 134  Q
    ||||||| ||||||||    
T  13248529 aagcataaacaaactc 13248544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 14998100 - 14998215
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    |||||| | |||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  14998100 tccataaaaatactatctcacttccactttggcacaaacaacggttgcatccaacccgacggtctctgatgttcaatcttcgatttctgacaaaccaaac 14998199  T
Q  119 aagcatagacaaactc 134  Q
    ||||||| ||||||||    
T  14998200 aagcataaacaaactc 14998215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 15292650 - 15292531
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||    
T  15292650 aaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgatggtctctgatgttcaatcttcgatttctgacaaacc 15292551  T
Q  115 aaacaagcatagacaaactc 134  Q
    ||||||||||| ||| ||||    
T  15292550 aaacaagcataaacatactc 15292531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 9291619 - 9291734
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    |||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| || |||| |||||||||||    
T  9291619 tccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatctttgatttcttacaaaccaaac 9291718  T
Q  119 aagcatagacaaactc 134  Q
    ||||||| ||||||||    
T  9291719 aagcataaacaaactc 9291734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 12342356 - 12342247
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||||||||| ||||||||||||||||  |||||||| |||| ||||||||||| ||| |  ||||||||||||||||||||||||||||||| |    
T  12342356 aaaatccatagagatgctatcccacttccactccggcacaaaaaacgattgcatcaaactcga-gacttctgatgttcaatcttcgacttctgacaaatc 12342258  T
Q  115 aaacaagcata 125  Q
    |||||||||||    
T  12342257 aaacaagcata 12342247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 38811698 - 38811803
Alignment:
Q  26 agatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 125  Q
    |||||||||||||||| ||||  |||||||||| |||| |||||||||||  ||| |||||||||||||||||||| ||||||||||||||||||| |||    
T  38811698 agatactatcccactttcactcaggcacaaacagcggtcgcatcaaacccagcggcttctgatgttcaatcttcgatttctgacaaaccaaacaagtata 38811797  T
Q  126 gacaaa 131  Q
     |||||    
T  38811798 cacaaa 38811803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 16028905 - 16029010
Alignment:
Q  29 tactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagac 128  Q
    |||||||| ||||||| |  |||||||| || ||||||| ||||||||||   |||||||||| ||| ||||||||||||||||||||||||||||| |     
T  16028905 tactatcctacttccagtcaggcacaaa-aatggttgcaacaaacccgacaacttctgatgttaaattttcgacttctgacaaaccaaacaagcatacat 16029003  T
Q  129 aaactct 135  Q
    |||||||    
T  16029004 aaactct 16029010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 20891763 - 20891880
Alignment:
Q  16 aaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacca 115  Q
    ||||||||||||||||| |||||||||||||  || |||  |||||||  |||||| || |  || |||||||| |||| ||| ||||||||||||| ||    
T  20891763 aaatccatagagatactgtcccacttccactccggtacatccaacggtgtcatcaaccctgtaggcttctgatgctcaaccttggacttctgacaaatca 20891862  T
Q  116 aacaagcatagacaaact 133  Q
    | |||||||| |||||||    
T  20891863 agcaagcataaacaaact 20891880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 79 - 117
Target Start/End: Complemental strand, 15147053 - 15147015
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaa 117  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15147053 ggtttctgatgttcaatcttcgacttctgacaaaccaaa 15147015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 18226614 - 18226560
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | ||| |||||||    
T  18226614 ggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaact 18226560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 82 - 133
Target Start/End: Original strand, 15078482 - 15078533
Alignment:
Q  82 ttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    ||||||||||||| ||| ||||||||||||| |||||| ||||| |||||||    
T  15078482 ttctgatgttcaaccttagacttctgacaaatcaaacatgcataaacaaact 15078533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 46
Target Start/End: Complemental strand, 44661358 - 44661327
Alignment:
Q  15 aaaatccatagagatactatcccacttccact 46  Q
    ||||||||||||||||||||||||||||||||    
T  44661358 aaaatccatagagatactatcccacttccact 44661327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 113
Target Start/End: Complemental strand, 16354613 - 16354579
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaac 113  Q
    |||||||||||||||||||||||||| ||||||||    
T  16354613 ggtttctgatgttcaatcttcgacttgtgacaaac 16354579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 12524520 - 12524573
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaac 132  Q
    ||||||||||| ||||  ||||||||||||||||||||||| | ||| ||||||    
T  12524520 ggtttctgatgctcaactttcgacttctgacaaaccaaacaggaatacacaaac 12524573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 14691682 - 14691786
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||| || || |||||||| ||||||| ||| |||   ||||||  |||||| || |  |||||||||||||||| ||| ||||| ||||||| |    
T  14691682 aaaatccatggatatgctatcccatttccactctggtacatctaacggtgtcatcaaccctgcaggtttctgatgttcaacctttgacttttgacaaatc 14691781  T
Q  115 aaaca 119  Q
    |||||    
T  14691782 aaaca 14691786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 14228 - 14112
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    |||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||| || |||| |||||||||||    
T  14228 tccatagaaatactatcccacttccactctggcacaaacaacgtttgcatcaaacccgacggtctctgatgttcaatctttgatttctaacaaaccaaac 14129  T
Q  119 aagcatagacaaactct 135  Q
    ||||||| |||||||||    
T  14128 aagcataaacaaactct 14112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 919 - 803
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| || |||||||||||||||| ||| |||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  919 aaaatccatagaaatgctatcccacttccactctggtacaaacaacaattgcatcaaacccgacggtttctgatgttcattcttcgacttctgacaaacc 820  T
Q  115 aaacaagcatagacaaa 131  Q
    ||||||||||| |||||    
T  819 aaacaagcataaacaaa 803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 9797 - 9916
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||||||| |||| |||||||||| |||||||||||| ||||||||||||||||||||||| | ||||||||||||||| |||| |||||||    
T  9797 aaaatccatagagatattatctcacttccactctggcacaaacaatggttgcatcaaacccgacggttttttatgttcaatcttcgatttctaacaaacc 9896  T
Q  115 aaacaagcatagacaaactc 134  Q
    ||||||||||| ||||||||    
T  9897 aaacaagcataaacaaactc 9916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 5990 - 6105
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    |||||||| || |||||||||||||||| ||| |||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||    
T  5990 tccatagaaatgctatcccacttccactctggaacaaacaacggttgcatcaaacccgacggtctctaatgttcaatcttcgatttctgacaaaccaaac 6089  T
Q  119 aagcatagacaaactc 134  Q
    ||||||| ||||||||    
T  6090 aagcataaacaaactc 6105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 19 - 134
Target Start/End: Complemental strand, 9352 - 9237
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    |||||||| || |||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||    
T  9352 tccatagaaatgctatcccacttccattctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctaacaaaccaaac 9253  T
Q  119 aagcatagacaaactc 134  Q
    ||||||| ||||||||    
T  9252 aagcataaacaaactc 9237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 18862 - 18977
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||||||| | | ||| ||||||||||||||||||| ||||||||||||||||    
T  18862 tccatagaaatactatcccacttccactctggcacaaacaacggttgcatcaaacacaaaggtctctgatgttcaatcttcgatttctgacaaaccaaac 18961  T
Q  119 aagcatagacaaactc 134  Q
    ||||||| ||||||||    
T  18962 aagcataaacaaactc 18977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 19 - 134
Target Start/End: Complemental strand, 106064 - 105949
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    |||||||| || || ||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||    
T  106064 tccatagaaatgctttcccacttccactctggcacaaacaacggttgcatcaaacccgacagtctctgatgttcaatcttcgatttctgacaaaccaaac 105965  T
Q  119 aagcatagacaaactc 134  Q
    ||||||| ||||||||    
T  105964 aagcatatacaaactc 105949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 45312 - 45418
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    |||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||    
T  45312 tccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttaaatcttcgatttctgacaaaccaaac 45411  T
Q  119 aagcata 125  Q
    |||||||    
T  45412 aagcata 45418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 3347 - 3472
Alignment:
Q  9 tcgaagaaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctga 108  Q
    ||||| ||| |||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| || || |||    
T  3347 tcgaacaaagtccatagaaatattatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatctttgatttttga 3446  T
Q  109 caaaccaaacaagcatagacaaactc 134  Q
    |||| |||||||||||| ||||||||    
T  3447 caaagcaaacaagcataaacaaactc 3472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 7980 - 8096
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||| |||||||||| ||||||||||||||| |||||||||||||| |||||||||||| |||||| | |||||||||||||||||||| |||||||||    
T  7980 aaaattcatagagatattatcccacttccactctggcacaaacaacgattgcatcaaacctgacggtctatgatgttcaatcttcgacttatgacaaacc 8079  T
Q  115 aaacaagcatagacaaa 131  Q
    ||||||||||| |||||    
T  8080 aaacaagcataaacaaa 8096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 301 - 421
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| ||  ||||||||||||  | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  301 aaaatccatagatatgttatcccacttccgttctagcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttccaacaaacc 400  T
Q  115 aaacaagcatagacaaactct 135  Q
    ||||||||||| |||||||||    
T  401 aaacaagcataaacaaactct 421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 8076 - 8192
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| || ||||||||| || ||||||||     
T  8076 aaaatctatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacctaacggtttctgatatttaatcttcgatttttgacaaaca 8175  T
Q  115 aaacaagcatagacaaa 131  Q
    ||||||||||| |||||    
T  8176 aaacaagcataaacaaa 8192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 273 - 392
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| || ||||||||  |||||| ||| |||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||    
T  273 aaaatccatagaaatgctatcccaaatccactctggaacaaacaacggttgcatcaaacccgatggtctctgatgttcaatcttcgatttctgacaaacc 372  T
Q  115 aaacaagcatagacaaactc 134  Q
    ||||||||||| ||||||||    
T  373 aaacaagcataaacaaactc 392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 19 - 134
Target Start/End: Complemental strand, 55391 - 55276
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    |||||||| || |||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||    
T  55391 tccatagaaatgctatcccacttccattctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcaatttctgacaaaccaaac 55292  T
Q  119 aagcatagacaaactc 134  Q
    ||||||| | ||||||    
T  55291 aagcataaaaaaactc 55276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 28867 - 28749
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||| || ||||||||||| ||||||| |||||||   || | |  ||||| ||| |  ||||||||||||||||||||||||||||||||||||    
T  28867 aaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcgggtttctgatgttcaatcttcgacttctgacaaacc 28768  T
Q  115 aaacaagcatagacaaact 133  Q
    ||||| | ||| |||||||    
T  28767 aaacaggaatacacaaact 28749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 79; Significance: 7e-37; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 15471 - 15585
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    |||||||| ||  ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||||| ||||||||||||||||    
T  15471 tccatagaaatgttatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgataaatcttcgatttctgacaaaccaaac 15570  T
Q  119 aagcatagacaaact 133  Q
    ||||||| |||||||    
T  15571 aagcataaacaaact 15585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 44349 - 44408
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacc 74  Q
    |||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||    
T  44349 aaaatccatagaaatgctatcccacttccactctggcacaaacaacggttgcatcaaacc 44408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 19 - 134
Target Start/End: Complemental strand, 3435 - 3320
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    |||||||| || ||||||||||||||||  ||||||||||||||||||||||||| || |||| |||||| |||||||||||| ||||||||||||||||    
T  3435 tccatagaaatgctatcccacttccactccggcacaaacaacggttgcatcaaactcgtcggtctctgattttcaatcttcgatttctgacaaaccaaac 3336  T
Q  119 aagcatagacaaactc 134  Q
    ||||||| ||||||||    
T  3335 aagcataaacaaactc 3320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 69; Significance: 7e-31; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 7304 - 7184
Alignment:
Q  15 aaaatccatagagatactat-cccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaac 113  Q
    ||||||||| || || |||| |||| |||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||| |||||||||||    
T  7304 aaaatccatggaaatgctatacccatttccactttggcacaaacaacggttgcatcaaacccgatggtctttgatgttcaatcttcgatttctgacaaac 7205  T
Q  114 caaacaagcatagacaaactc 134  Q
    ||| ||| |||| ||||||||    
T  7204 caagcaaacataaacaaactc 7184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 13009 - 13125
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| || ||||||||||||||||  ||||||  |||||||  || ||| || |  || ||||||||||||| ||| |||||| |||||  |    
T  13009 aaaatccatagaaatgctatcccacttccactccggcacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagacttcagacaagtc 13108  T
Q  115 aaacaagcatagacaaa 131  Q
    ||||| ||||| |||||    
T  13109 aaacatgcatacacaaa 13125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 134
Target Start/End: Complemental strand, 8381 - 8266
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    |||||||| || || ||| ||||||||| | |||||||||||||||| |||||||||| |||||||| |||||||||||| |||||||||| ||||||||    
T  8381 tccatagaaatgctgtccaacttccactctagcacaaacaacggttgtatcaaacccggcggtttctaatgttcaatctttgacttctgacgaaccaaac 8282  T
Q  119 aagcatagacaaactc 134  Q
    ||||||| ||||||||    
T  8281 aagcataaacaaactc 8266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 26621 - 26733
Alignment:
Q  19 tccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaac 118  Q
    |||||||| ||  ||||||||||||| | ||||||||||||||||||||||||||||||  || ||||||||||||||||||| |||| ||||||||||     
T  26621 tccatagaaatgttatcccacttccattctggcacaaacaacggttgcatcaaacccgatagtctctgatgttcaatcttcgatttcttacaaaccaaat 26720  T
Q  119 aagcatagacaaa 131  Q
    ||||||| |||||    
T  26721 aagcataaacaaa 26733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 14949 - 15028
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaa 94  Q
    ||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  14949 aaaatccatagagatatgatcccacttccactttggcacaaacaatggttgcatcaaacctgacggtttctgatgttcaa 15028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 52 - 133
Target Start/End: Original strand, 75406 - 75487
Alignment:
Q  52 acaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    |||||||||||||||||| ||||||| || ||||||||||||||||| ||||| ||||||| |||||||||||| |||||||    
T  75406 acaaacaacggttgcatccaacccgatggcttctgatgttcaatcttagacttttgacaaagcaaacaagcatatacaaact 75487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 9562 - 9444
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||||||| || |||| |||||| |||  || ||||||||| ||| |||||||   ||||| ||||| || |||||||||||||| |||||||||    
T  9562 aaaatccatagagttattatctcacttctactcaggtacaaacaacagttacatcaaatatgacggcttctgctgctcaatcttcgacttttgacaaacc 9463  T
Q  115 aaacaagcatagacaaact 133  Q
    ||||||||||| |||||||    
T  9462 aaacaagcatacacaaact 9444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 39315 - 39211
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||| || ||||||||||| ||||||| |||||||   || | |  ||||||||| |  |||||||||||||||||||||||||||||||||||     
T  39315 aaaatccatggatatactatcccatttccactctggcacatctaaggataccatcaaaccagcgggtttctgatgttcaatcttcgacttctgacaaact 39216  T
Q  115 aaaca 119  Q
    |||||    
T  39215 aaaca 39211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 3005 - 3123
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||| || ||||||||||| ||||||| |||||||   || | |  ||||| ||| |  |||||||||||||||||| |||||||||||||||||    
T  3005 aaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcaggtttctgatgttcaatcgtcgacttctgacaaacc 3104  T
Q  115 aaacaagcatagacaaact 133  Q
    ||||| | ||| |||||||    
T  3105 aaacaggaatacacaaact 3123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 24309 - 24427
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||| || ||||||||||| ||||||| |||||||   || | |  ||||| ||| |  |||||||||||||||||| |||||||||||||||||    
T  24309 aaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcaggtttctgatgttcaatcatcgacttctgacaaacc 24408  T
Q  115 aaacaagcatagacaaact 133  Q
    ||||| | ||| |||||||    
T  24409 aaacaggaatacacaaact 24427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 14850 - 14968
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||| || ||||||||||| ||||||| |||||||   |||| |  ||||| ||| |  ||||||||||| |||| ||||||||||| ||||| |    
T  14850 aaaatccatggatatactatcccatttccactctggcacatctaacgataccatcataccagcaggtttctgatgctcaaccttcgacttctaacaaatc 14949  T
Q  115 aaacaagcatagacaaact 133  Q
    ||||||||||| |||||||    
T  14950 aaacaagcatacacaaact 14968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 19477 - 19531
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||| |||||||    
T  19477 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaggaatacacaaact 19531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 34901 - 34955
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||| |||||||    
T  34901 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaggaatacacaaact 34955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 181010 - 181128
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||| || ||||||||||| ||||||| |||||||   || | |  ||||| ||| |  |||||||||||||| |||||||||||||||||||||    
T  181010 aaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcaggtttctgatgttcgatcttcgacttctgacaaacc 181109  T
Q  115 aaacaagcatagacaaact 133  Q
    ||||| | ||| |||||||    
T  181110 aaacaggaatacacaaact 181128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 101047 - 100929
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| ||| | |||||||||||||  || |||  |||||||  || ||| || |  || ||||||||||||| ||| ||||||||||||| |    
T  101047 aaaatccatagaaatattgtcccacttccactccggtacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagacttctgacaaatc 100948  T
Q  115 aaacaagcatagacaaact 133  Q
    ||||| ||||| |||||||    
T  100947 aaacacgcatacacaaact 100929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 196909 - 196855
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||    
T  196909 ggtttctgatgctcaatcttcgacttctgacaaaccaaacaagaatacacaaact 196855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 278261 - 278221
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaaca 119  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  278261 ggtttctgatgttcaatcttcgacttctgacaaaccaaaca 278221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 6825 - 6943
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||| || ||||||||||| ||||||| |||||||   || | |  ||||| ||| |  |||||||||||||||| ||||||||| ||||||| |    
T  6825 aaaatccatggatatactatcccatttccactctggcacatctaaagataccatcataccagcaggtttctgatgttcaaccttcgacttatgacaaatc 6924  T
Q  115 aaacaagcatagacaaact 133  Q
    ||||||| ||| |||||||    
T  6925 aaacaagaatacacaaact 6943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 19433 - 19380
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaac 132  Q
    ||||||||||| ||||||||||||||||| |||| |||||||||||| ||||||    
T  19433 ggtttctgatgctcaatcttcgacttctggcaaatcaaacaagcatacacaaac 19380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1710 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold1710
Description:

Target: scaffold1710; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 675 - 791
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| ||  |||||||||||||||| ||||||  |||||||  || ||| || |  || ||||||||||||| ||| ||||||||||||  |    
T  675 aaaatccatagaaatgttatcccacttccacttcggcacatccaacggtgacaacaaccctgcaggcttctgatgttcaaccttagacttctgacaagtc 774  T
Q  115 aaacaagcatagacaaa 131  Q
    ||||| ||||| |||||    
T  775 aaacatgcatacacaaa 791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 7183 - 7299
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||| || ||||||||||| ||||||| |||||||   |||| |  ||||| ||| |  ||||| ||||| |||| ||||||||||||||||| |    
T  7183 aaaatccatggatatactatcccatttccactctggcacatctaacgataccatcataccagcaggtttttgatgctcaaccttcgacttctgacaaatc 7282  T
Q  115 aaacaagcatagacaaa 131  Q
    ||||||| ||| |||||    
T  7283 aaacaagaatacacaaa 7299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 229918 - 229970
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 131  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| ||| |||||    
T  229918 ggtttctgatgctcaattttcgacttctgacaaaccaaacaagaatacacaaa 229970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 27073 - 27188
Alignment:
Q  16 aaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacca 115  Q
    ||||||||||||||||| |||||||||||||  || |||   ||||||  || ||| || |  || |||||||| |||| ||| ||||||||||||| ||    
T  27073 aaatccatagagatactgtcccacttccactacggtacatcaaacggtgtcaacaaccctgcaggcttctgatgctcaaccttggacttctgacaaatca 27172  T
Q  116 aacaagcatagacaaa 131  Q
    |||||||||| |||||    
T  27173 aacaagcataaacaaa 27188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 3836 - 3782
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    ||||||||||| |||||||| |||||||||||||||||||| | ||| |||||||    
T  3836 ggtttctgatgctcaatctttgacttctgacaaaccaaacaggaatacacaaact 3782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 7762 - 7708
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    |||||||||||||||| ||||||||||| ||||| |||||||| ||| |||||||    
T  7762 ggtttctgatgttcaaccttcgacttctaacaaatcaaacaagaatacacaaact 7708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 9781 - 9899
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||| || ||||||||| | ||||||| |||||||   ||||||  |||||| || |  ||||| ||||| |||| ||| ||||||||||||| |    
T  9781 aaaatccatggatatactatcctatttccactctggcacatctaacggtgtcatcaaccctgcaggtttttgatgctcaacctttgacttctgacaaatc 9880  T
Q  115 aaacaagcatagacaaact 133  Q
    ||||||| ||| |||||||    
T  9881 aaacaagaatacacaaact 9899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 121
Target Start/End: Complemental strand, 3245 - 3203
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaag 121  Q
    ||||||||| ||||| |||||||||||||||||||||||||||    
T  3245 ggtttctgacgttcagtcttcgacttctgacaaaccaaacaag 3203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 6860 - 6978
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||| || ||||||||||| |||||||  ||||||   |||| |  ||||| ||| |  ||||||||||| |||| ||||||||||||||||| |    
T  6860 aaaatccatggatatactatcccatttccactcaggcacatctaacgataccatcataccagcaggtttctgatgctcaaccttcgacttctgacaaatc 6959  T
Q  115 aaacaagcatagacaaact 133  Q
    || |||| ||| |||||||    
T  6960 aagcaagaatacacaaact 6978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 13343 - 13397
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | ||| |||||||    
T  13343 ggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaact 13397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 9471 - 9525
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    ||||||||||| |||||||| |||||||||||||||||||| | ||| |||||||    
T  9471 ggtttctgatgctcaatctttgacttctgacaaaccaaacaggaatacacaaact 9525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 33004 - 32950
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    ||||||||||| |||||||| ||| |||||||||||||||| | ||| |||||||    
T  33004 ggtttctgatgctcaatctttgacctctgacaaaccaaacaggaatacacaaact 32950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 15235 - 15289
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | ||| |||||||    
T  15235 ggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaact 15289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 63462 - 63408
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    ||||||| |||||||||||||||||||||||||||| |||| | ||| |||||||    
T  63462 ggtttcttatgttcaatcttcgacttctgacaaacctaacaggaatacacaaact 63408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 11552 - 11436
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| || ||||||||||||||||  ||||||  |||||||  || ||| || |  || ||||||||||||| ||| ||||| ||||||  |    
T  11552 aaaatccatagaaatgctatcccacttccactccggcacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagacttttgacaagtc 11453  T
Q  115 aaacaagcatagacaaa 131  Q
    ||||| ||||| |||||    
T  11452 aaacatgcatacacaaa 11436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 15322 - 15206
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| || ||||||||||||||||  ||||||  |||||||  || ||| || |  || ||||||||||||| ||| ||||| ||||||  |    
T  15322 aaaatccatagaaatgctatcccacttccactccggcacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagacttttgacaagtc 15223  T
Q  115 aaacaagcatagacaaa 131  Q
    ||||| ||||| |||||    
T  15222 aaacatgcatacacaaa 15206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 571 - 623
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 131  Q
    ||||||||||| |||| ||||||||||||||||| |||||||| ||| |||||    
T  571 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatacacaaa 623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 4448 - 4332
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||||||| || ||||||||||||||||  ||||||  |||||||  || ||| || |  || || |||||||||| ||| ||||||||||||  |    
T  4448 aaaatccatagaaatgctatcccacttccactccggcacatccaacggtgtcaacaaccctgcaggcttttgatgttcaaccttagacttctgacaagtc 4349  T
Q  115 aaacaagcatagacaaa 131  Q
    ||||| ||||| |||||    
T  4348 aaacacgcatacacaaa 4332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 29820 - 29876
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaactct 135  Q
    ||||||||||| |||| |||||| |||||||||| |||||||| ||| |||||||||    
T  29820 ggtttctgatggtcaaccttcgatttctgacaaatcaaacaagaatacacaaactct 29876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2094 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold2094
Description:

Target: scaffold2094; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 82 - 133
Target Start/End: Complemental strand, 490 - 439
Alignment:
Q  82 ttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    ||||||||||||| ||| ||||||||||||| |||||| ||||| |||||||    
T  490 ttctgatgttcaaccttagacttctgacaaatcaaacatgcatatacaaact 439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 11437 - 11496
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacc 74  Q
    ||||||||||||||||||||| |||||||||   | |||||||||| ||| |||||||||    
T  11437 aaaatccatagagatactatctcacttccaccccgacacaaacaacagttacatcaaacc 11496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1602 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1602
Description:

Target: scaffold1602; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 1498 - 1444
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    ||||||||||| ||||  |||||||||||||||| |||||||| ||| |||||||    
T  1498 ggtttctgatgctcaactttcgacttctgacaaatcaaacaagaatacacaaact 1444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 2342 - 2396
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    ||||||||||| |||| ||||||||| ||||||| |||||||| ||| |||||||    
T  2342 ggtttctgatgctcaaccttcgacttttgacaaatcaaacaagaatacacaaact 2396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 16530 - 16584
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    ||||||||||| ||||  |||||||||||||||| |||||||| ||| |||||||    
T  16530 ggtttctgatgctcaactttcgacttctgacaaatcaaacaagaatacacaaact 16584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 22742 - 22796
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    ||||||||||| |||||||| |||||||||||||| ||||| | ||| |||||||    
T  22742 ggtttctgatgctcaatctttgacttctgacaaactaaacaggaatatacaaact 22796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 3414 - 3364
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttg 65  Q
    |||||||||| | ||||||||| |||||||||  |||||||||||||||||    
T  3414 aaaatccatatatatactatcctacttccactccggcacaaacaacggttg 3364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 113
Target Start/End: Original strand, 25849 - 25883
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaac 113  Q
    |||||||||||||||||||||||||| ||||||||    
T  25849 ggtttctgatgttcaatcttcgacttgtgacaaac 25883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 390631 - 390577
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 133  Q
    ||||||||||| ||||  |||||||||||||||| |||||||| ||| |||||||    
T  390631 ggtttctgatgctcaactttcgacttctgacaaatcaaacaagaatacacaaact 390577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1355 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1355
Description:

Target: scaffold1355; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 1551 - 1604
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaac 132  Q
    ||||||||||| ||||  |||||||||||||||| |||||||| ||| ||||||    
T  1551 ggtttctgatgctcaactttcgacttctgacaaatcaaacaagaatacacaaac 1604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 39442 - 39389
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaac 132  Q
    ||||||||||| |||| |||||| |||||||||| |||||||| ||| ||||||    
T  39442 ggtttctgatgctcaaccttcgatttctgacaaatcaaacaagaatacacaaac 39389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 12305 - 12409
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    ||||||||| || || |||||||| ||||||| ||| |||   ||||||  |||||| || |  |||||||||||||||| ||| ||||| ||||||| |    
T  12305 aaaatccatggatatgctatcccatttccactctggtacatctaacggtgtcatcaaccctgcaggtttctgatgttcaacctttgacttttgacaaatc 12404  T
Q  115 aaaca 119  Q
    |||||    
T  12405 aaaca 12409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 7871 - 7987
Alignment:
Q  15 aaaatccatagagatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaacc 114  Q
    |||||||| ||| || ||||||||||||||||  ||||||  |||||||  || ||| || |  || ||||||||||||| ||| ||||||||| ||  |    
T  7871 aaaatccagagaaatgctatcccacttccactccggcacatccaacggtgtcaacaaccctgcaggcttctgatgttcaaccttagacttctgataagtc 7970  T
Q  115 aaacaagcatagacaaa 131  Q
    ||||| ||||| |||||    
T  7971 aaacatgcatacacaaa 7987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 254 - 214
Alignment:
Q  79 ggtttctgatgttcaatcttcgacttctgacaaaccaaaca 119  Q
    ||||| ||||||||||||||||| ||||||||||| |||||    
T  254 ggtttgtgatgttcaatcttcgatttctgacaaactaaaca 214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University