View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18989_high_1 (Length: 875)

Name: NF18989_high_1
Description: NF18989
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18989_high_1
NF18989_high_1
[»] chr1 (37 HSPs)
chr1 (21-346)||(28536594-28536934)
chr1 (114-349)||(35686480-35686724)
chr1 (645-741)||(3069809-3069905)
chr1 (638-741)||(37712102-37712205)
chr1 (638-741)||(4068150-4068253)
chr1 (638-741)||(48819334-48819437)
chr1 (638-741)||(6337704-6337807)
chr1 (638-741)||(16888914-16889016)
chr1 (638-741)||(37329360-37329463)
chr1 (644-741)||(15515301-15515398)
chr1 (21-82)||(35686778-35686839)
chr1 (638-741)||(26988183-26988286)
chr1 (638-741)||(28690039-28690142)
chr1 (638-741)||(41196658-41196761)
chr1 (667-741)||(1005375-1005449)
chr1 (667-741)||(35590165-35590239)
chr1 (648-735)||(45267506-45267594)
chr1 (266-341)||(48472600-48472676)
chr1 (638-741)||(9572732-9572835)
chr1 (638-741)||(13038982-13039085)
chr1 (638-737)||(26435123-26435222)
chr1 (638-741)||(36422929-36423032)
chr1 (642-724)||(14460993-14461075)
chr1 (638-727)||(16708848-16708937)
chr1 (638-727)||(32497220-32497309)
chr1 (638-741)||(23544826-23544929)
chr1 (638-741)||(18317036-18317139)
chr1 (667-741)||(26946081-26946155)
chr1 (638-727)||(35282542-35282631)
chr1 (638-738)||(46500948-46501049)
chr1 (641-729)||(31249729-31249817)
chr1 (638-741)||(22593355-22593458)
chr1 (675-738)||(49971289-49971352)
chr1 (638-732)||(1683849-1683943)
chr1 (707-741)||(39941545-39941579)
chr1 (638-727)||(25485797-25485886)
chr1 (642-727)||(41003437-41003521)
[»] chr3 (27 HSPs)
chr3 (726-863)||(242090-242221)
chr3 (811-864)||(1128476-1128529)
chr3 (638-741)||(43079882-43079985)
chr3 (638-741)||(40240525-40240628)
chr3 (638-738)||(40581024-40581125)
chr3 (641-741)||(22809144-22809244)
chr3 (642-741)||(34707665-34707764)
chr3 (670-741)||(53218020-53218091)
chr3 (638-739)||(45331243-45331344)
chr3 (638-738)||(37243504-37243604)
chr3 (638-741)||(3845890-3845992)
chr3 (638-741)||(10521189-10521292)
chr3 (667-738)||(28741191-28741262)
chr3 (638-741)||(42956127-42956230)
chr3 (667-741)||(3870203-3870277)
chr3 (638-724)||(20685837-20685923)
chr3 (667-741)||(23816148-23816222)
chr3 (691-741)||(52421142-52421192)
chr3 (670-727)||(29614242-29614299)
chr3 (641-741)||(48597817-48597918)
chr3 (670-741)||(52021281-52021353)
chr3 (638-741)||(10667433-10667536)
chr3 (638-717)||(17752079-17752158)
chr3 (638-717)||(19053399-19053478)
chr3 (667-729)||(50021946-50022007)
chr3 (670-727)||(3645351-3645408)
chr3 (638-723)||(20174888-20174973)
[»] chr5 (35 HSPs)
chr5 (638-741)||(28625515-28625618)
chr5 (638-740)||(35536881-35536982)
chr5 (640-741)||(13060552-13060653)
chr5 (638-741)||(41419536-41419639)
chr5 (638-741)||(40452425-40452529)
chr5 (640-741)||(12986961-12987065)
chr5 (638-738)||(39154709-39154809)
chr5 (638-741)||(17657277-17657380)
chr5 (638-741)||(24030250-24030352)
chr5 (638-741)||(41059737-41059840)
chr5 (638-707)||(1943064-1943133)
chr5 (638-741)||(12467299-12467406)
chr5 (638-741)||(5559867-5559973)
chr5 (638-738)||(29659098-29659198)
chr5 (638-741)||(29922137-29922240)
chr5 (638-741)||(42852057-42852159)
chr5 (638-736)||(28357181-28357279)
chr5 (638-743)||(1576663-1576768)
chr5 (638-743)||(1608047-1608152)
chr5 (638-741)||(3977510-3977611)
chr5 (638-734)||(27805957-27806053)
chr5 (638-741)||(7364257-7364360)
chr5 (642-741)||(11912054-11912153)
chr5 (686-741)||(41534658-41534713)
chr5 (667-738)||(43319041-43319112)
chr5 (638-740)||(6144774-6144876)
chr5 (653-741)||(1868881-1868969)
chr5 (638-741)||(13625468-13625572)
chr5 (638-738)||(28357390-28357490)
chr5 (686-741)||(31637090-31637145)
chr5 (691-741)||(1473391-1473441)
chr5 (667-741)||(7984140-7984214)
chr5 (638-732)||(40152824-40152918)
chr5 (618-741)||(2878608-2878727)
chr5 (686-727)||(15122593-15122634)
[»] chr2 (22 HSPs)
chr2 (638-740)||(4026961-4027063)
chr2 (638-741)||(25836661-25836763)
chr2 (638-741)||(33321260-33321363)
chr2 (638-741)||(36501463-36501566)
chr2 (638-741)||(38216054-38216157)
chr2 (638-740)||(8832493-8832595)
chr2 (671-741)||(12223887-12223957)
chr2 (638-741)||(887447-887550)
chr2 (637-741)||(7480846-7480949)
chr2 (638-741)||(39592284-39592385)
chr2 (638-741)||(4090524-4090627)
chr2 (638-740)||(5903569-5903676)
chr2 (638-741)||(21788492-21788595)
chr2 (638-741)||(23956212-23956315)
chr2 (642-741)||(29774780-29774879)
chr2 (638-724)||(38471739-38471825)
chr2 (641-738)||(11777022-11777119)
chr2 (638-743)||(13056275-13056380)
chr2 (638-741)||(42064886-42064989)
chr2 (707-741)||(11072981-11073015)
chr2 (706-740)||(33321419-33321453)
chr2 (692-741)||(12442848-12442897)
[»] chr6 (19 HSPs)
chr6 (21-82)||(7722965-7723026)
chr6 (638-741)||(2255769-2255872)
chr6 (667-741)||(13429490-13429565)
chr6 (638-738)||(10874022-10874122)
chr6 (638-741)||(2027124-2027227)
chr6 (638-741)||(10687345-10687448)
chr6 (638-741)||(32675837-32675940)
chr6 (638-739)||(6758664-6758766)
chr6 (673-739)||(6776845-6776911)
chr6 (639-741)||(8014823-8014925)
chr6 (638-741)||(10755231-10755331)
chr6 (638-738)||(2034177-2034277)
chr6 (645-729)||(9202354-9202438)
chr6 (638-741)||(25430714-25430817)
chr6 (638-741)||(6958659-6958762)
chr6 (638-741)||(23239282-23239385)
chr6 (638-736)||(35071376-35071475)
chr6 (670-724)||(32165241-32165295)
chr6 (638-683)||(9201669-9201714)
[»] chr4 (34 HSPs)
chr4 (638-739)||(36740941-36741042)
chr4 (638-741)||(17222864-17222967)
chr4 (638-741)||(36254984-36255087)
chr4 (638-741)||(48591372-48591475)
chr4 (638-741)||(7148807-7148910)
chr4 (638-741)||(28663608-28663710)
chr4 (637-726)||(22273830-22273919)
chr4 (638-741)||(29877674-29877777)
chr4 (638-741)||(41228938-41229041)
chr4 (638-741)||(46704218-46704321)
chr4 (667-741)||(23335677-23335751)
chr4 (687-741)||(35124422-35124476)
chr4 (638-735)||(18630843-18630940)
chr4 (638-738)||(488332-488432)
chr4 (638-741)||(897005-897108)
chr4 (638-741)||(28074400-28074502)
chr4 (638-741)||(12495592-12495697)
chr4 (638-700)||(34526285-34526347)
chr4 (638-741)||(23297473-23297573)
chr4 (638-699)||(48687011-48687072)
chr4 (639-738)||(2702664-2702763)
chr4 (638-741)||(38345770-38345872)
chr4 (638-741)||(42611817-42611918)
chr4 (670-724)||(15184598-15184652)
chr4 (638-727)||(4603280-4603369)
chr4 (656-741)||(33533963-33534048)
chr4 (638-714)||(9153530-9153606)
chr4 (672-741)||(43699463-43699534)
chr4 (670-738)||(52274100-52274168)
chr4 (638-713)||(11256609-11256684)
chr4 (654-741)||(32628813-32628900)
chr4 (638-724)||(9319100-9319186)
chr4 (639-700)||(2330422-2330483)
chr4 (638-683)||(11298675-11298720)
[»] chr7 (22 HSPs)
chr7 (638-741)||(30181585-30181688)
chr7 (640-741)||(14691249-14691350)
chr7 (638-732)||(29378689-29378783)
chr7 (638-739)||(46743991-46744091)
chr7 (638-738)||(47654362-47654462)
chr7 (638-741)||(34922966-34923071)
chr7 (640-741)||(38372593-38372694)
chr7 (670-741)||(17944688-17944759)
chr7 (638-741)||(44613421-44613524)
chr7 (638-741)||(29390499-29390601)
chr7 (638-738)||(43818826-43818927)
chr7 (638-738)||(22032800-22032900)
chr7 (673-742)||(37779265-37779336)
chr7 (638-741)||(39279464-39279568)
chr7 (667-734)||(6406849-6406916)
chr7 (667-738)||(16012736-16012807)
chr7 (686-741)||(20888609-20888664)
chr7 (646-741)||(23356447-23356542)
chr7 (685-727)||(14675955-14675997)
chr7 (638-741)||(47511078-47511183)
chr7 (638-683)||(33204927-33204972)
chr7 (637-714)||(49104315-49104392)
[»] chr8 (18 HSPs)
chr8 (638-741)||(16972304-16972408)
chr8 (638-737)||(32131479-32131578)
chr8 (638-741)||(10298875-10298977)
chr8 (638-741)||(32975722-32975825)
chr8 (638-741)||(34286512-34286614)
chr8 (686-741)||(35168437-35168492)
chr8 (644-731)||(8752851-8752938)
chr8 (638-741)||(24350467-24350570)
chr8 (638-738)||(9131076-9131176)
chr8 (638-703)||(32212963-32213028)
chr8 (638-741)||(35285963-35286066)
chr8 (638-741)||(41145344-41145446)
chr8 (638-700)||(9130965-9131027)
chr8 (638-732)||(36907592-36907686)
chr8 (691-741)||(38895694-38895744)
chr8 (638-735)||(25465795-25465891)
chr8 (670-727)||(37410893-37410950)
chr8 (638-727)||(42363265-42363354)
[»] scaffold0157 (1 HSPs)
scaffold0157 (638-741)||(24780-24885)
[»] scaffold0057 (1 HSPs)
scaffold0057 (638-741)||(24337-24440)
[»] scaffold0024 (1 HSPs)
scaffold0024 (667-741)||(97186-97257)
[»] scaffold0332 (1 HSPs)
scaffold0332 (638-741)||(14694-14797)
[»] scaffold1367 (1 HSPs)
scaffold1367 (670-739)||(1095-1164)


Alignment Details
Target: chr1 (Bit Score: 140; Significance: 7e-73; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 21 - 346
Target Start/End: Complemental strand, 28536934 - 28536594
Alignment:
Q  21 taatgaagttagaaattcagactaacagattaaaaaagttaagtttgtggaatgatcttgttttttggatcac------tgcattattatggttctatta 114  Q
    |||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| | |  ||| |      |   || || ||| ||  |      
T  28536934 taatcaagttagaaattcagaataacagattaaaatagttaagtttgtggaatgatcttgttgtatcaatctcctatgttttttttttttggatcactag 28536835  T
Q  115 tttgttcacattgctgcaattgccacattgtttgttaaattccataaaatgttgattcttatcattacaagctgttattgttgctaaatttattgtgttt 214  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||| ||||||||||||||| || ||||||||    
T  28536834 tttgttcaccttgctgcaattgccacattgtttgttaaattccgtaaaatggtgattcttattattacaagccgttattgttgctaaacttgttgtgttt 28536735  T
Q  215 gatctatgattgagaccttcttatcttttattcttcaggtgctcttgactc-------aaagggctggggcgttagaacactagaagatttgcccaa-aa 306  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||       |||| ||||||||||||||||||||||| |||| |||||       
T  28536734 gatctatgattgagaccttcttatcttttattcttcaggtgttcttgactcaagaaggaaagagctggggcgttagaacactagaatatttccccaaggg 28536635  T
Q  307 aacctttgtctgtgaatatgca-gggagattttaacaaatt 346  Q
    | |||||||| ||||||||||| ||||||||||||| ||||    
T  28536634 atcctttgtcagtgaatatgcaggggagattttaaccaatt 28536594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 114 - 349
Target Start/End: Complemental strand, 35686724 - 35686480
Alignment:
Q  114 atttgttcacattgctgcaattgccacattgtttgttaaattccataaaatgttgattcttatcattacaagctgttattgttgctaaatttattgtgtt 213  Q
    ||||||| || || ||||||||||||||||||||||||||| || ||||||| |||||||||| ||||||||| ||||||||||||||| || |||||||    
T  35686724 atttgtttaccttactgcaattgccacattgtttgttaaatcccgtaaaatggtgattcttattattacaagccgttattgttgctaaactttttgtgtt 35686625  T
Q  214 tgatctatgattgagaccttcttatcttttattcttcaggtgctcttgactc-------aaagggctggggcgttagaacactagaagatttgcccaa-a 305  Q
    |||||||| ||||||||||| ||||||||||||||||||||| |||||||||       ||||||||||||||||||||| |||||||||||||||||      
T  35686624 tgatctataattgagacctttttatcttttattcttcaggtgttcttgactcaagaaggaaagggctggggcgttagaacgctagaagatttgcccaagg 35686525  T
Q  306 aaacctttgtctgtgaatatgca-gggagattttaacaaattcag 349  Q
     | |||||||||||||||||||| ||||||||||||| |||||||    
T  35686524 gatcctttgtctgtgaatatgcaggggagattttaaccaattcag 35686480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 645 - 741
Target Start/End: Original strand, 3069809 - 3069905
Alignment:
Q  645 aataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttatgaa 741  Q
    ||||||||| |||||||| |  ||||||||||||||||| ||||| |||||||||| ||| |||||||||||| |||||||||||||||||||||||    
T  3069809 aataaataagcttttatgttaattcataagttctcactagtgaaaattgtatcttcataagctgttttttcataaactaccttgacaagcttatgaa 3069905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 37712205 - 37712102
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||||||||||||||||||||||| |  |||||||||||| ||||  |||| |||||||||| |||  ||||||||||| |||||||||||||||||||    
T  37712205 ttatgcaaataaataaacttttatgttaattcataagttcttactaacgaaagttgtatcttcataagttgttttttcataaactaccttgacaagctta 37712106  T
Q  738 tgaa 741  Q
    ||||    
T  37712105 tgaa 37712102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 4068253 - 4068150
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||||||||||||||||||||||  |  |||||||||||||||||  |||| | |||||||| |||  ||||||||||| |||||||||||||||||||    
T  4068253 ttatgcaaataaataaacttttatattaattcataagttctcactaacgaaaatagtatcttcataagttgttttttcataaactaccttgacaagctta 4068154  T
Q  738 tgaa 741  Q
    ||||    
T  4068153 tgaa 4068150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 48819437 - 48819334
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| |||||||| |  |||||||||||||||||   |||  ||||||||| ||| |||||||||||| |||||||||||||||||||    
T  48819437 ttatgcaaataaataagcttttatgttaattcataagttctcactaacaaaaaatgtatcttcataagctgttttttcataaactaccttgacaagctta 48819338  T
Q  738 tgaa 741  Q
    ||||    
T  48819337 tgaa 48819334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 6337704 - 6337807
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||||||| |||||| |||||||| |  ||||||||||||| |||   ||| |||||||||| ||| |||||||||||| |||||||||||||||||||    
T  6337704 ttatgcaaacaaataagcttttatgttaattcataagttctcgctaacaaaaattgtatcttcataagctgttttttcataaactaccttgacaagctta 6337803  T
Q  738 tgaa 741  Q
    ||||    
T  6337804 tgaa 6337807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 16888914 - 16889016
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| |||||||| |   |||||| ||||||||| ||||| |||||||||| ||| |||||||||||| ||||||||| |||||||||    
T  16888914 ttatgcaaataaataagcttttatgttaagtcataaattctcactaatgaaaattgtatcttcataagctgttttttcataaactacctt-acaagctta 16889012  T
Q  738 tgaa 741  Q
    ||||    
T  16889013 tgaa 16889016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 37329360 - 37329463
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| |||||||| |  || |||||||||||| |  |||| |||||||||| ||| |||||||||||| ||||||||||||||| |||    
T  37329360 ttatgcaaataaataagcttttatgttaatttataagttctcaccaacgaaaattgtatcttcataagctgttttttcataaactaccttgacaagttta 37329459  T
Q  738 tgaa 741  Q
    ||||    
T  37329460 tgaa 37329463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 644 - 741
Target Start/End: Original strand, 15515301 - 15515398
Alignment:
Q  644 aaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttatgaa 741  Q
    |||||||||| |||| ||| |  |||||||||||||||||  |||| |||||||||| ||| || ||||||||| |||||||||||||||||||||||    
T  15515301 aaataaataagctttcatgttaattcataagttctcactaacgaaaattgtatcttcataagctcttttttcataaactaccttgacaagcttatgaa 15515398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 35686839 - 35686778
Alignment:
Q  21 taatgaagttagaaattcagactaacagattaaaaaagttaagtttgtggaatgatcttgtt 82  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  35686839 taatcaagttagaaattcagactaacagattaaaaaagttatgtttgtgaaatgatcttgtt 35686778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 26988286 - 26988183
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||| | |||||||| |  |||||||||| | ||||  || | |||||||||| ||| |||||||||||| |||||||||||||||||||    
T  26988286 ttatgcaaataaattagcttttatgttaattcataagtttttactaacgacaattgtatcttcataagctgttttttcataaactaccttgacaagctta 26988187  T
Q  738 tgaa 741  Q
    ||||    
T  26988186 tgaa 26988183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 28690142 - 28690039
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| |||||||| |  |||| || ||||||||| | ||| |||||||||| ||| |||||| ||||| |||||||||||||| ||||    
T  28690142 ttatgcaaataaataagcttttatgttaattcagaatttctcactaataaaaattgtatcttcataagctgtttgttcataaactaccttgacaaactta 28690043  T
Q  738 tgaa 741  Q
    ||||    
T  28690042 tgaa 28690039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 41196658 - 41196761
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| | |||||| |  |||| ||| ||||||||   ||| |||||||||| ||| |||||||||||| |||||| ||||||||||||    
T  41196658 ttatgcaaataaataagcctttatgttaattcacaagctctcactaacaaaaattgtatcttcataagctgttttttcataaactacattgacaagctta 41196757  T
Q  738 tgaa 741  Q
    ||||    
T  41196758 tgaa 41196761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 667 - 741
Target Start/End: Complemental strand, 1005449 - 1005375
Alignment:
Q  667 ttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttatgaa 741  Q
    ||||||||||||||||||  ||| |||||||||| |||   ||||||||||||||||||| ||||||||||||||    
T  1005449 ttcataagttctcactatcaaaaattgtatcttcataagtagttttttcattaactacctagacaagcttatgaa 1005375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 667 - 741
Target Start/End: Complemental strand, 35590239 - 35590165
Alignment:
Q  667 ttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttatgaa 741  Q
    ||||||||||||||||   |||| |||||||||| ||| |||||||||||| ||| |||||||||||||||||||    
T  35590239 ttcataagttctcactgacgaaaattgtatcttcataagctgttttttcataaacaaccttgacaagcttatgaa 35590165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 648 - 735
Target Start/End: Complemental strand, 45267594 - 45267506
Alignment:
Q  648 aaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactg-ttttttcattaactaccttgacaagct 735  Q
    |||||| |||||||| || |||||||||||| ||||  |||| |||||||||| ||| ||| ||||||||| |||||||||||||||||    
T  45267594 aaataagcttttatgtttattcataagttcttactaacgaaaattgtatcttcataagctgtttttttcataaactaccttgacaagct 45267506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 266 - 341
Target Start/End: Original strand, 48472600 - 48472676
Alignment:
Q  266 aaagggctggggcgttagaacactagaagatttgcccaa-aaaacctttgtctgtgaatatgcagggagattttaac 341  Q
    |||||| ||||||||||||||||||||||||||||||||   | ||||||||||||||||||  |||| ||||||||    
T  48472600 aaaggggtggggcgttagaacactagaagatttgcccaagggatcctttgtctgtgaatatgtggggaaattttaac 48472676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 9572732 - 9572835
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| |||||||  |  |||||||||||||||||   |||  | ||||||| |||| ||||||||||| ||||||||| |||| ||||    
T  9572732 ttatgcaaataaataagcttttatattaattcataagttctcactaacaaaaactttatcttcataaattgttttttcataaactaccttaacaaactta 9572831  T
Q  738 tgaa 741  Q
    ||||    
T  9572832 tgaa 9572835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 13039085 - 13038982
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||||||||||||||||||||||  |  ||||||| |||||||||  ||||  | ||||||| |||  ||||||||||| ||||||||| ||||||| |    
T  13039085 ttatgcaaataaataaacttttatattaattcataacttctcactaacgaaaactttatcttcataagttgttttttcataaactaccttaacaagctca 13038986  T
Q  738 tgaa 741  Q
    ||||    
T  13038985 tgaa 13038982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 638 - 737
Target Start/End: Original strand, 26435123 - 26435222
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||||||||||||| |||| |||| |  |||||||||||||| ||  ||||  ||||||||| ||||| |||||||||| |||||| ||||||| ||||    
T  26435123 ttatgcaaataaatagacttatatgttaattcataagttctcagtaacgaaaaatgtatcttcataaacagttttttcataaactactttgacaaactta 26435222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 36422929 - 36423032
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||||||||||||||||||||||  |  || |||| |||||||||  ||||||| ||||||| |||  ||||| ||||| ||||||||| |||| ||||    
T  36422929 ttatgcaaataaataaacttttatattattttataacttctcactaacgaaatttttatcttcataagttgtttattcataaactaccttaacaaactta 36423028  T
Q  738 tgaa 741  Q
    ||||    
T  36423029 tgaa 36423032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 642 - 724
Target Start/End: Original strand, 14460993 - 14461075
Alignment:
Q  642 gcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactac 724  Q
    ||||||||| ||| ||||||| |  || |||||||||||||| ||||| |||||||||  |||||||||||||||| ||||||    
T  14460993 gcaaataaacaaatttttatgttaatttataagttctcactaatgaaaattgtatctttataaactgttttttcataaactac 14461075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 638 - 727
Target Start/End: Complemental strand, 16708937 - 16708848
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactacctt 727  Q
    ||||||||||||||||| ||||||| |  |||||||| ||| |||| ||||| |||||| ||| |||| ||||||||||| ||| |||||    
T  16708937 ttatgcaaataaataaatttttatgttaattcataagatcttactaatgaaaattgtatattcataaattgttttttcataaacaacctt 16708848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 638 - 727
Target Start/End: Original strand, 32497220 - 32497309
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactacctt 727  Q
    ||||| ||||||||||||||||||  |  || ||||| ||||||||  |||| ||||||| || |||||||||||||||| |||||||||    
T  32497220 ttatgtaaataaataaacttttattttaatttataagctctcactaacgaaaattgtatcctcataaactgttttttcataaactacctt 32497309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 23544929 - 23544826
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatt-tgtatcttcttaaactgttttttcattaactaccttgacaagctt 736  Q
    |||||||||||||||| |||||||| |  ||| ||||||||||| |  ||||   ||||| ||| ||| |||||||||||| ||||||||||||||||||    
T  23544929 ttatgcaaataaataagcttttatgttaattc-taagttctcaccaacgaaaaaatgtattttcataagctgttttttcataaactaccttgacaagctt 23544831  T
Q  737 atgaa 741  Q
    |||||    
T  23544830 atgaa 23544826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 18317139 - 18317036
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||| ||||||||||| |||||| |  |||||||||||||| ||  |||  |||||||||| ||   ||||||||||| | |||||||||||| ||||    
T  18317139 ttatgccaataaataaacgtttatgttgattcataagttctcattaacgaatattgtatcttcataggatgttttttcataacctaccttgacaatctta 18317040  T
Q  738 tgaa 741  Q
    ||||    
T  18317039 tgaa 18317036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 667 - 741
Target Start/End: Original strand, 26946081 - 26946155
Alignment:
Q  667 ttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttatgaa 741  Q
    |||| ||||| ||||||  |||| |||||||||| |||  ||||||||||| ||||||||| |||||||||||||    
T  26946081 ttcacaagttgtcactaaggaaaattgtatcttcataagttgttttttcataaactaccttaacaagcttatgaa 26946155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 638 - 727
Target Start/End: Original strand, 35282542 - 35282631
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactacctt 727  Q
    ||||||||||||||| ||||||||  |  |||||||||| |||||| | ||| || ||||||| |||  ||||||||||| |||||||||    
T  35282542 ttatgcaaataaatagacttttatattaattcataagttttcactaattaaaattttatcttcataagttgttttttcataaactacctt 35282631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 638 - 738
Target Start/End: Original strand, 46500948 - 46501049
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattg-aaatttgtatcttcttaaactgttttttcattaactaccttgacaagctt 736  Q
    |||||||||||||||| |||||||| |  || ||||||| ||||||  | ||| |||||||||| ||| || ||||||||| ||||||  ||||||||||    
T  46500948 ttatgcaaataaataagcttttatgttgatttataagttttcactaacggaaaattgtatcttcataacctattttttcataaactacaatgacaagctt 46501047  T
Q  737 at 738  Q
    ||    
T  46501048 at 46501049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 641 - 729
Target Start/End: Complemental strand, 31249817 - 31249729
Alignment:
Q  641 tgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttga 729  Q
    |||||||||||||||||||||  |  ||||||  ||||||||| ||||| |||||||||| |||||| | || |||| ||||| |||||    
T  31249817 tgcaaataaataaacttttatattaattcatagattctcactaatgaaaattgtatcttcataaactatcttatcataaactatcttga 31249729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 22593355 - 22593458
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| |||||||| |  || ||||||||||||||   ||| |||||||||  |||| || |||||| | |||| | || |||||||||    
T  22593355 ttatgcaaataaataagcttttatgttaatttataagttctcactaacaaaaattgtatctttataaagtgatttttcgtaaactgcatttacaagctta 22593454  T
Q  738 tgaa 741  Q
    ||||    
T  22593455 tgaa 22593458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 675 - 738
Target Start/End: Complemental strand, 49971352 - 49971289
Alignment:
Q  675 ttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttat 738  Q
    |||||||||  |||| |||||||||| ||| |||||||||||| |||||| || ||||||||||    
T  49971352 ttctcactaacgaaaattgtatcttcgtaagctgttttttcataaactacattaacaagcttat 49971289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 638 - 732
Target Start/End: Original strand, 1683849 - 1683943
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaa 732  Q
    |||||| ||||||||| |||| ||| |  ||||||||||||  |||  |||| |||||  ||  |||||||||||||||| ||||||||||||||    
T  1683849 ttatgctaataaataacctttgatggtaattcataagttcttgctaacgaaaattgtagttttataaactgttttttcataaactaccttgacaa 1683943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 707 - 741
Target Start/End: Complemental strand, 39941579 - 39941545
Alignment:
Q  707 tgttttttcattaactaccttgacaagcttatgaa 741  Q
    |||||||||||||||||| ||||||||||||||||    
T  39941579 tgttttttcattaactactttgacaagcttatgaa 39941545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 727
Target Start/End: Complemental strand, 25485886 - 25485797
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactacctt 727  Q
    ||||||||||||||||| ||||||  |  || |||| || ||||||  |||| || ||||||| |||| ||||||||||| |||||||||    
T  25485886 ttatgcaaataaataaatttttatattaatttataaattttcactagcgaaaattttatcttcataaattgttttttcataaactacctt 25485797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 642 - 727
Target Start/End: Complemental strand, 41003521 - 41003437
Alignment:
Q  642 gcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactacctt 727  Q
    ||||||||||||||||||||| |  || |||||||||||||| | ||| || ||||||  ||| ||| |||||||| |||||||||    
T  41003521 gcaaataaataaacttttatgttaattaataagttctcactaataaaaattatatcttagtaagctg-tttttcataaactacctt 41003437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 4e-34; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 726 - 863
Target Start/End: Original strand, 242090 - 242221
Alignment:
Q  726 ttgacaagcttatgaaaagtgcttgtcatcatcttagtttatttgctgctctgtttgaaatttgttgaatgatgctcttatgattataatgattgttat- 824  Q
    |||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||     
T  242090 ttgataagcttatgaaaagtgtttgttatcatcttagtttatttgctgctctgtttgaaatt---------atgctcttatgattataatgattgttatt 242180  T
Q  825 --tgctgttgtgtttggttgtgatgttctgtttgctttgat 863  Q
      |||||||||||||||||||||| | ||||||||||||||    
T  242181 gctgctgttgtgtttggttgtgatttactgtttgctttgat 242221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 811 - 864
Target Start/End: Complemental strand, 1128529 - 1128476
Alignment:
Q  811 ataatgattgttattgctgttgtgtttggttgtgatgttctgtttgctttgatg 864  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  1128529 ataatgattgttattgttgttgtgtttggttgtgatgttctgtttgctttgatg 1128476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 43079882 - 43079985
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||| ||||||||||| |||||| | |  |||||||||||||| |   |||| |||||||||| ||| |||||||||||| |||||||||||||||||||    
T  43079882 ttattcaaataaataagcttttaagttaattcataagttctcaatcacgaaaattgtatcttcataagctgttttttcataaactaccttgacaagctta 43079981  T
Q  738 tgaa 741  Q
    ||||    
T  43079982 tgaa 43079985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 40240525 - 40240628
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| |||||||  |  |||||||| ||||||||  |||| |||||||||| |||  ||||||||||| |||||||| |||| |||||    
T  40240525 ttatgcaaataaataagcttttatcttaattcataagctctcactaacgaaaattgtatcttcataagttgttttttcataaactacctagacacgctta 40240624  T
Q  738 tgaa 741  Q
    ||||    
T  40240625 tgaa 40240628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 638 - 738
Target Start/End: Original strand, 40581024 - 40581125
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactg-ttttttcattaactaccttgacaagctt 736  Q
    ||||||||||||||||  ||||||| |  |||||||||||||||||  |||| |||| ||||| ||  ||| ||||||||| ||||||||||||||||||    
T  40581024 ttatgcaaataaataagattttatgttaattcataagttctcactaacgaaaattgtttcttcatacgctgtttttttcataaactaccttgacaagctt 40581123  T
Q  737 at 738  Q
    ||    
T  40581124 at 40581125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 641 - 741
Target Start/End: Original strand, 22809144 - 22809244
Alignment:
Q  641 tgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttatga 740  Q
    |||||||||||||  ||||||| |  ||||||||||||   ||  |||| |||||||||| ||| | |||||||||| ||||||||||||||||||||||    
T  22809144 tgcaaataaataagtttttatgttaattcataagttcttcttaacgaaaattgtatcttcataagcagttttttcataaactaccttgacaagcttatga 22809243  T
Q  741 a 741  Q
    |    
T  22809244 a 22809244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 642 - 741
Target Start/End: Original strand, 34707665 - 34707764
Alignment:
Q  642 gcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttatgaa 741  Q
    ||||||||||||  ||||||| |  ||| ||||||||| |||  |||| |||||||||| | | |||||||||||| ||||||||| |||||||||||||    
T  34707665 gcaaataaataagtttttatgttaattcgtaagttctcgctaacgaaaattgtatcttcgttagctgttttttcataaactaccttaacaagcttatgaa 34707764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 670 - 741
Target Start/End: Original strand, 53218020 - 53218091
Alignment:
Q  670 ataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttatgaa 741  Q
    ||||||||||||||  |||| ||||||||||  ||  ||||||||||| |||||||||||||||||||||||    
T  53218020 ataagttctcactaacgaaaattgtatcttcaaaagttgttttttcataaactaccttgacaagcttatgaa 53218091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 638 - 739
Target Start/End: Original strand, 45331243 - 45331344
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||||||||||||||||||||||| |  |||||| |||||  |||  |||| |||||||||| |||  ||||||||||| ||||  ||| |||||||||    
T  45331243 ttatgcaaataaataaacttttatgttaattcatatgttcttgctagcgaaaattgtatcttcataagatgttttttcataaactgtcttaacaagctta 45331342  T
Q  738 tg 739  Q
    ||    
T  45331343 tg 45331344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 638 - 738
Target Start/End: Complemental strand, 37243604 - 37243504
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||| ||| |||||||  |  ||||||||||||||| | |||||  |||| |||| |||||| ||||||||| |||||| || |||||||||    
T  37243604 ttatgcaaataagtaagcttttatcttaattcataagttctcaccaatgaaaagtgtaccttcataaactattttttcataaactacgttaacaagctta 37243505  T
Q  738 t 738  Q
    |    
T  37243504 t 37243504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 3845992 - 3845890
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| |||||||| |  |||||| ||| ||||||  |||| | |||||||| ||  ||||||| |||| ||||| |||||||||||||    
T  3845992 ttatgcaaataaataagcttttatgttaattcatatgttttcactagcgaaaat-gtatcttcatatgctgttttgtcataaactagcttgacaagctta 3845894  T
Q  738 tgaa 741  Q
    ||||    
T  3845893 tgaa 3845890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 10521292 - 10521189
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||||||||||| || |||||| |||  || ||||||| ||||||   ||| || ||||||| |||| |||| |||||| |||||| ||||||||||||    
T  10521292 ttatgcaaataaacaagcttttacgataatttataagttttcactaacaaaagttatatcttcataaaatgttgtttcataaactacattgacaagctta 10521193  T
Q  738 tgaa 741  Q
    ||||    
T  10521192 tgaa 10521189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 667 - 738
Target Start/End: Original strand, 28741191 - 28741262
Alignment:
Q  667 ttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttat 738  Q
    |||||||||||||||||  |||| ||||| |||| ||| |||||||||||| |||||| || ||||||||||    
T  28741191 ttcataagttctcactaacgaaaattgtaccttcataatctgttttttcataaactactttaacaagcttat 28741262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 42956127 - 42956230
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||||||||||||||  ||||||| |  || ||||||||||||||  |||| |||||||||  ||| ||||||| |||| |||||| | |||||| |||    
T  42956127 ttatgcaaataaataagtttttatgttaatttataagttctcactaacgaaaattgtatctttataagctgttttatcataaactacttcgacaagttta 42956226  T
Q  738 tgaa 741  Q
    ||||    
T  42956227 tgaa 42956230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 667 - 741
Target Start/End: Original strand, 3870203 - 3870277
Alignment:
Q  667 ttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttatgaa 741  Q
    |||||||||||||| || |||||  |||||| || ||   ||||||||||| |||||||||||||||||||||||    
T  3870203 ttcataagttctcattaatgaaaagtgtatcatcatatgttgttttttcataaactaccttgacaagcttatgaa 3870277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 638 - 724
Target Start/End: Complemental strand, 20685923 - 20685837
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactac 724  Q
    |||| |||||||||||  |||||||||  |||| |||||||||||| ||||| |||||||||| |||  |||||||| || ||||||    
T  20685923 ttatccaaataaataagtttttatgataattcacaagttctcactaatgaaaattgtatcttcataagttgttttttgataaactac 20685837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 667 - 741
Target Start/End: Original strand, 23816148 - 23816222
Alignment:
Q  667 ttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttatgaa 741  Q
    ||||||||||||||||    ||| |||||||||| ||| |||||||||||| |||||||||||  ||||||||||    
T  23816148 ttcataagttctcactgaccaaagttgtatcttcataagctgttttttcataaactaccttgaatagcttatgaa 23816222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 691 - 741
Target Start/End: Original strand, 52421142 - 52421192
Alignment:
Q  691 ttgtatcttcttaaactgttttttcattaactaccttgacaagcttatgaa 741  Q
    |||||||||| | |||| ||||||||| |||||||||||||||||||||||    
T  52421142 ttgtatcttcattaactattttttcataaactaccttgacaagcttatgaa 52421192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 670 - 727
Target Start/End: Complemental strand, 29614299 - 29614242
Alignment:
Q  670 ataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactacctt 727  Q
    ||||| ||||||||  |||| |||||||||| |||||||||||||||| |||||||||    
T  29614299 ataagctctcactaacgaaaattgtatcttcataaactgttttttcataaactacctt 29614242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 641 - 741
Target Start/End: Original strand, 48597817 - 48597918
Alignment:
Q  641 tgcaaataaataaacttttatgattgttcat-aagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttatg 739  Q
    ||||||||||||| |||||||| |  ||||| |||||||||||   |||| |||||||||| |||  |||||||||||  ||||||| ||||| ||||||    
T  48597817 tgcaaataaataagcttttatgttaattcattaagttctcactgacgaaaattgtatcttcataagttgttttttcatacactacctcgacaaacttatg 48597916  T
Q  740 aa 741  Q
    ||    
T  48597917 aa 48597918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 670 - 741
Target Start/End: Complemental strand, 52021353 - 52021281
Alignment:
Q  670 ataagttctcactattgaaatttgtatcttcttaaactgtttttt-cattaactaccttgacaagcttatgaa 741  Q
    ||||||||||||||  |||| || ||||||| ||| ||||||||| ||| |||||||||||||| ||||||||    
T  52021353 ataagttctcactaacgaaaattatatcttcataagctgtttttttcataaactaccttgacaatcttatgaa 52021281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 10667536 - 10667433
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||||||||||| || |||||| |||  |  ||||||| ||||||   ||| || ||||||| |||| |||| |||||| |||||| ||||||||||||    
T  10667536 ttatgcaaataaacaagcttttacgataatatataagttttcactaacaaaagttatatcttcataaaatgttgtttcataaactacattgacaagctta 10667437  T
Q  738 tgaa 741  Q
    ||||    
T  10667436 tgaa 10667433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 638 - 717
Target Start/End: Original strand, 17752079 - 17752158
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcat 717  Q
    ||||| ||||||||||||||||||| |  || ||||||||| ||||  |||| |||||||||| ||||||| | ||||||    
T  17752079 ttatgtaaataaataaacttttatgttaatttataagttcttactaacgaaaattgtatcttcataaactgatctttcat 17752158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 638 - 717
Target Start/End: Original strand, 19053399 - 19053478
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcat 717  Q
    ||||| ||||||||||||||||||| |  || ||||||||| ||||  |||| |||||||||| ||||||| | ||||||    
T  19053399 ttatgtaaataaataaacttttatgttaatttataagttcttactaacgaaaattgtatcttcataaactgatctttcat 19053478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 667 - 729
Target Start/End: Original strand, 50021946 - 50022007
Alignment:
Q  667 ttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttga 729  Q
    ||||||||||| ||||| |||||||| |||| || ||| |||||||||||| |||||||||||    
T  50021946 ttcataagttcccactaatgaaatttttatc-tcataagctgttttttcataaactaccttga 50022007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 670 - 727
Target Start/End: Complemental strand, 3645408 - 3645351
Alignment:
Q  670 ataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactacctt 727  Q
    ||||| ||||||||  |||| |||||||||| | |||||||||||||| |||||||||    
T  3645408 ataagctctcactaacgaaaattgtatcttcatgaactgttttttcataaactacctt 3645351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 723
Target Start/End: Original strand, 20174888 - 20174973
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaacta 723  Q
    |||||||||||||||| |||||||| |  |||||||| ||| ||||  |||| |||||| ||| |||  ||||||||||| |||||    
T  20174888 ttatgcaaataaataagcttttatgctaattcataagatcttactaacgaaaattgtatattcataagttgttttttcataaacta 20174973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 4e-25; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 28625618 - 28625515
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| |||||||| |  |||||| ||||||||||  |||| |||||||||| ||| |||||||||||| |||||||||||||||||||    
T  28625618 ttatgcaaataaataagcttttatgttaattcataggttctcactaacgaaaattgtatcttcataagctgttttttcataaactaccttgacaagctta 28625519  T
Q  738 tgaa 741  Q
    ||||    
T  28625518 tgaa 28625515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 638 - 740
Target Start/End: Complemental strand, 35536982 - 35536881
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| ||||||| ||| |||||||||||||| ||  |||| |||||||||| ||| |||||||||||| ||||| |||||||||||||    
T  35536982 ttatgcaaataaataagcttttat-attattcataagttctcagtaacgaaaattgtatcttcataagctgttttttcataaactatcttgacaagctta 35536884  T
Q  738 tga 740  Q
    |||    
T  35536883 tga 35536881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 640 - 741
Target Start/End: Original strand, 13060552 - 13060653
Alignment:
Q  640 atgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttatg 739  Q
    |||||||||||||| |||||||| |  |||||||||||||||||  |||| | ||| |||| ||| |||||||||||| |||||||||||||||||||||    
T  13060552 atgcaaataaataagcttttatgttaattcataagttctcactaacgaaaatggtaacttcataagctgttttttcataaactaccttgacaagcttatg 13060651  T
Q  740 aa 741  Q
    ||    
T  13060652 aa 13060653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 41419639 - 41419536
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||| ||||||||||  ||||||| |  || ||||||||||||||  |||| |||||||||| ||| |||||||||||| |||||||||||||||||||    
T  41419639 ttatgaaaataaataagtttttatgttaattgataagttctcactaacgaaaattgtatcttcataagctgttttttcataaactaccttgacaagctta 41419540  T
Q  738 tgaa 741  Q
    ||||    
T  41419539 tgaa 41419536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 40452425 - 40452529
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaat-ttgtatcttcttaaactgttttttcattaactaccttgacaagctt 736  Q
    |||||||||||||||| || ||||| || |||||||||||||||||  ||||  || ||||||| ||| |||||| ||||| ||||||||||||||||||    
T  40452425 ttatgcaaataaataagctattatgtttattcataagttctcactaacgaaaaattatatcttcataagctgtttcttcataaactaccttgacaagctt 40452524  T
Q  737 atgaa 741  Q
    |||||    
T  40452525 atgaa 40452529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 640 - 741
Target Start/End: Original strand, 12986961 - 12987065
Alignment:
Q  640 atgcaaataaataaacttttatg---attgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctt 736  Q
    |||||||||||||| ||||||||   ||  |||||||||||||||||   ||| | ||| |||| |||||||||||||||| ||||||||||||||||||    
T  12986961 atgcaaataaataagcttttatgttaataattcataagttctcactaacaaaaatggtaacttcataaactgttttttcataaactaccttgacaagctt 12987060  T
Q  737 atgaa 741  Q
    |||||    
T  12987061 atgaa 12987065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 638 - 738
Target Start/End: Original strand, 39154709 - 39154809
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| ||||| || |  |||||||||||||| || | ||| ||| |||||| ||| | |||||||||| |||||||||||||||||||    
T  39154709 ttatgcaaataaataagcttttgtgttaattcataagttctcaataataaaaattgcatcttcataatcagttttttcataaactaccttgacaagctta 39154808  T
Q  738 t 738  Q
    |    
T  39154809 t 39154809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 17657380 - 17657277
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| |||||||| |  |||||||||||||||||  |||| | |||||||| |||  ||||||||||| ||||||  || ||||||||    
T  17657380 ttatgcaaataaataaccttttatgttaattcataagttctcactaacgaaaatcgtatcttcataagatgttttttcataaactacaatggcaagctta 17657281  T
Q  738 tgaa 741  Q
    ||||    
T  17657280 tgaa 17657277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 24030352 - 24030250
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| |||||||| |  |||||||||||||||||  |||| ||||||| ||   || ||||||||||| |||||| ||||||||||||    
T  24030352 ttatgcaaataaataagcttttatgttaattcataagttctcactaacgaaaattgtatcctc-gcaagtgttttttcataaactactttgacaagctta 24030254  T
Q  738 tgaa 741  Q
    ||||    
T  24030253 tgaa 24030250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 41059737 - 41059840
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| |||||||| |  |||||||||||||||||  |||| ||| |||||| |||  || |||||||| ||| ||||||| |||||||    
T  41059737 ttatgcaaataaataagcttttatgttaattcataagttctcactaacgaaaattgaatcttcataaggtgatttttcataaacaaccttgataagctta 41059836  T
Q  738 tgaa 741  Q
    ||||    
T  41059837 tgaa 41059840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 638 - 707
Target Start/End: Complemental strand, 1943133 - 1943064
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaact 707  Q
    |||||||||||||||| |||||||| |  ||||||||||||||||| ||||| |||||||||| ||||||    
T  1943133 ttatgcaaataaataagcttttatgctaattcataagttctcactaatgaaaattgtatcttcataaact 1943064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 12467406 - 12467299
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgt---tcataagttctcactattgaaatttgtatcttcttaaactgtttttt-cattaactaccttgacaag 733  Q
    |||||||||||||||| |||||||| | ||   ||||||||||||||||   ||| |||| ||||| ||| ||||||||| ||| |||||||||||||||    
T  12467406 ttatgcaaataaataagcttttatgttagtaattcataagttctcactaacaaaaattgtctcttcataagctgtttttttcataaactaccttgacaag 12467307  T
Q  734 cttatgaa 741  Q
    ||||||||    
T  12467306 cttatgaa 12467299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 5559867 - 5559973
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactg---ttttttcattaactaccttgacaagc 734  Q
    |||||||||||||||| ||||||||    ||||||| |||||||||  |||| |||||||||| ||| |||   ||||||||| |||||||||||| |||    
T  5559867 ttatgcaaataaataagcttttatgtaaattcataaattctcactaacgaaaattgtatcttcataagctgcttttttttcataaactaccttgacgagc 5559966  T
Q  735 ttatgaa 741  Q
    |||||||    
T  5559967 ttatgaa 5559973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 638 - 738
Target Start/End: Complemental strand, 29659198 - 29659098
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||||||||||||||  ||||||  |  ||||||||||||||||| ||||| |||||  ||| |||||||||||||| | |||||| || |||||||||    
T  29659198 ttatgcaaataaataagtttttatcttaattcataagttctcactaatgaaaattgtactttcataaactgttttttcttaaactacattaacaagctta 29659099  T
Q  738 t 738  Q
    |    
T  29659098 t 29659098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 29922137 - 29922240
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| |||||||  |  |||||||| ||||||||   ||| |||||| | | ||| |||| ||||||| |||||||||||||||||||    
T  29922137 ttatgcaaataaataagcttttatattaattcataagctctcactaaaaaaaattgtatatgcataagctgtgttttcataaactaccttgacaagctta 29922236  T
Q  738 tgaa 741  Q
    ||||    
T  29922237 tgaa 29922240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 42852159 - 42852057
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||| ||||||| |||||||| |  |||||||||||||||||  |||| |||||| || | ||  ||||||||||| ||||| |||||||||||||    
T  42852159 ttatgcaactaaataagcttttatgttaattcataagttctcactaacgaaaattgtattttat-aagttgttttttcataaactatcttgacaagctta 42852061  T
Q  738 tgaa 741  Q
    ||||    
T  42852060 tgaa 42852057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 638 - 736
Target Start/End: Complemental strand, 28357279 - 28357181
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctt 736  Q
    |||||||||||||||| |||||||| |  || ||||||| ||  ||  |||| |||||||||| ||| |||||||||||| |||||| |||||||||||    
T  28357279 ttatgcaaataaataagcttttatgttaatttataagttttcgttaacgaaaattgtatcttcataacctgttttttcataaactacattgacaagctt 28357181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 638 - 743
Target Start/End: Complemental strand, 1576768 - 1576663
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||||||||||||| | ||||||| |  ||| |||||||||||||   ||| ||||||||||  ||  ||||||| ||| |||||| ||||||||||||    
T  1576768 ttatgcaaataaatacagttttatgttaattcttaagttctcactaacaaaaattgtatcttcacaagttgtttttccataaactacattgacaagctta 1576669  T
Q  738 tgaaaa 743  Q
    ||||||    
T  1576668 tgaaaa 1576663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 638 - 743
Target Start/End: Original strand, 1608047 - 1608152
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||||||||||||| | ||||||| |  ||| |||||||||||||   ||| ||||||||||  ||  ||||||| ||| |||||| ||||||||||||    
T  1608047 ttatgcaaataaatacagttttatgttaattcttaagttctcactaacaaaaattgtatcttcacaagttgtttttccataaactacattgacaagctta 1608146  T
Q  738 tgaaaa 743  Q
    ||||||    
T  1608147 tgaaaa 1608152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 3977611 - 3977510
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| |||||||| |  |||||| ||||||||||   ||| ||  ||   | |||||||||||||||| |||||||||||||||||||    
T  3977611 ttatgcaaataaataagcttttatgttaattcatacgttctcactaacaaaagttagata--cataaactgttttttcataaactaccttgacaagctta 3977514  T
Q  738 tgaa 741  Q
    ||||    
T  3977513 tgaa 3977510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 638 - 734
Target Start/End: Complemental strand, 27806053 - 27805957
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagc 734  Q
    ||||||||||||||||||||||||| |  || ||||||| ||||||   ||| |||||||||  |||  ||||||||||| |||||| |||||||||    
T  27806053 ttatgcaaataaataaacttttatgttaatttataagttttcactaacaaaaattgtatctttataacatgttttttcataaactacattgacaagc 27805957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 7364257 - 7364360
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| |||||||  |  |||||||||||||||||   ||  |||||||||| |||  ||||| || || ||||||||| |||||||||    
T  7364257 ttatgcaaataaataagcttttatattaattcataagttctcactaacaaatattgtatcttcataagttgtttgttgataaactaccttaacaagctta 7364356  T
Q  738 tgaa 741  Q
    ||||    
T  7364357 tgaa 7364360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 642 - 741
Target Start/End: Original strand, 11912054 - 11912153
Alignment:
Q  642 gcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttatgaa 741  Q
    |||||||||||| |||| ||| |  |||||||||||||||||   ||| |||||||||| ||| || ||||||||  |||||| |||||||| |||||||    
T  11912054 gcaaataaataagctttcatgttaattcataagttctcactaacaaaaattgtatcttcataagctcttttttcacaaactactttgacaagattatgaa 11912153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 686 - 741
Target Start/End: Complemental strand, 41534713 - 41534658
Alignment:
Q  686 gaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttatgaa 741  Q
    |||| |||||||||| ||| |||||||||| | |||||||||||||||||||||||    
T  41534713 gaaaattgtatcttcataagctgttttttcgtaaactaccttgacaagcttatgaa 41534658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 667 - 738
Target Start/End: Complemental strand, 43319112 - 43319041
Alignment:
Q  667 ttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttat 738  Q
    |||||||||||||||||  |||| || || |||| |||||||||||||||| |||||| || ||||||||||    
T  43319112 ttcataagttctcactaacgaaaattataccttcataaactgttttttcataaactacattaacaagcttat 43319041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 638 - 740
Target Start/End: Complemental strand, 6144876 - 6144774
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||||||||||| || |||||||  |  ||||||||||||| |||   ||| |||||| ||| ||| || ||||||||| || ||||||||||||||||    
T  6144876 ttatgcaaataaacaagcttttatattaattcataagttctcgctaacaaaaattgtatattcataagctattttttcataaaataccttgacaagctta 6144777  T
Q  738 tga 740  Q
    |||    
T  6144776 tga 6144774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 653 - 741
Target Start/End: Complemental strand, 1868969 - 1868881
Alignment:
Q  653 aacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttatgaa 741  Q
    |||||||||| |  || ||| ||||||||||  |||| |||||||||| |||  || |||||||| |||||||||||||||||| ||||    
T  1868969 aacttttatgttaattgatacgttctcactaacgaaaattgtatcttcataagttgatttttcataaactaccttgacaagcttgtgaa 1868881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 13625468 - 13625572
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttt-tcattaactaccttgacaagctt 736  Q
    ||||||||||||||||||||||||  |  || ||||||| ||||||  |||| || ||||||  ||| |||||||| |||| ||||||||  ||||||||    
T  13625468 ttatgcaaataaataaacttttatattaatttataagttttcactaacgaaaattttatctttataagctgtttttatcataaactacctcaacaagctt 13625567  T
Q  737 atgaa 741  Q
    |||||    
T  13625568 atgaa 13625572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 638 - 738
Target Start/End: Complemental strand, 28357490 - 28357390
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||||||||||||||  ||||||  |  ||| |||||||||||||  |||| ||| | |||| |||||||||||||||| |||||| || |||| ||||    
T  28357490 ttatgcaaataaataagtttttatcttaattcgtaagttctcactaacgaaaattggaccttcataaactgttttttcataaactacattaacaaactta 28357391  T
Q  738 t 738  Q
    |    
T  28357390 t 28357390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 686 - 741
Target Start/End: Original strand, 31637090 - 31637145
Alignment:
Q  686 gaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttatgaa 741  Q
    |||| |||||||||| ||| ||||| |||||| || ||||||||||||||||||||    
T  31637090 gaaaattgtatcttcataagctgttctttcataaattaccttgacaagcttatgaa 31637145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 691 - 741
Target Start/End: Complemental strand, 1473441 - 1473391
Alignment:
Q  691 ttgtatcttcttaaactgttttttcattaactaccttgacaagcttatgaa 741  Q
    |||||||||| ||| |||||||||||| || || |||||||||||||||||    
T  1473441 ttgtatcttcataagctgttttttcataaattaacttgacaagcttatgaa 1473391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 667 - 741
Target Start/End: Complemental strand, 7984214 - 7984140
Alignment:
Q  667 ttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttatgaa 741  Q
    ||||||||||||||||  ||||| |||||||||  ||||||||||||||   ||| || ||||||| ||||||||    
T  7984214 ttcataagttctcacttatgaaaattgtatctttgtaaactgttttttctcaaacaactttgacaaacttatgaa 7984140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 638 - 732
Target Start/End: Original strand, 40152824 - 40152918
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaa 732  Q
    |||||||||||||||| |||||||  |  ||||||||||||||  |  |||| || ||||||| |||| ||||||||||| ||||| ||| ||||    
T  40152824 ttatgcaaataaataatcttttatattaattcataagttctcaagaacgaaaattttatcttcataaattgttttttcataaactatcttaacaa 40152918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 618 - 741
Target Start/End: Original strand, 2878608 - 2878727
Alignment:
Q  618 gcttatgaaaaaatagtttattatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcat 717  Q
    ||||||||||||||||    ||||| |||||||||| |||||||| |  || | ||||| ||||||   ||| |||||||||| ||||||||| ||||||    
T  2878608 gcttatgaaaaaatag---cttatgtaaataaataagcttttatgttaatttaaaagttttcactaacaaaaattgtatcttc-taaactgttgtttcat 2878703  T
Q  718 taactaccttgacaagcttatgaa 741  Q
     ||| || ||||||| ||||||||    
T  2878704 aaaccacattgacaaacttatgaa 2878727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 686 - 727
Target Start/End: Complemental strand, 15122634 - 15122593
Alignment:
Q  686 gaaatttgtatcttcttaaactgttttttcattaactacctt 727  Q
    |||| |||||||||| |||||||||||||||| |||||||||    
T  15122634 gaaaattgtatcttcataaactgttttttcataaactacctt 15122593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 4e-22; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 638 - 740
Target Start/End: Complemental strand, 4027063 - 4026961
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| || ||||| |  |||||||||||||||||   ||| |||||||||| ||| |||||||||||| |||||||||||||||||||    
T  4027063 ttatgcaaataaataagctattatgttaattcataagttctcactaacaaaaattgtatcttcataagctgttttttcataaactaccttgacaagctta 4026964  T
Q  738 tga 740  Q
    |||    
T  4026963 tga 4026961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 25836661 - 25836763
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| |||||||| || |||||||||||||||||  || | |||| ||||| ||| | |||||||||| |||||||||||||||||||    
T  25836661 ttatgcaaataaataagcttttatg-ttattcataagttctcactaacgataattgtgtcttcataagccgttttttcataaactaccttgacaagctta 25836759  T
Q  738 tgaa 741  Q
    ||||    
T  25836760 tgaa 25836763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 33321260 - 33321363
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||||| |||||| |  |||| ||| ||||||||   ||| |||||||||| ||| |||||||||||| |||||||||||||||||||    
T  33321260 ttatgcaaataaataaacctttatgttaattcacaagctctcactaacaaaaattgtatcttcataagctgttttttcataaactaccttgacaagctta 33321359  T
Q  738 tgaa 741  Q
    ||||    
T  33321360 tgaa 33321363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 36501463 - 36501566
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| |||||||| |  ||||| |||||||||||  | || || ||||||| ||| |||||||||||| |||||||||||||||||||    
T  36501463 ttatgcaaataaataagcttttatgttaattcatgagttctcactaacgcaaattttatcttcataagctgttttttcataaactaccttgacaagctta 36501562  T
Q  738 tgaa 741  Q
    ||||    
T  36501563 tgaa 36501566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 38216157 - 38216054
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| |||||||| |   ||||||||||||||||  |||| |||||||||| ||  || ||||||| | |||||||||||||||||||    
T  38216157 ttatgcaaataaataagcttttatgttaactcataagttctcactaacgaaaattgtatcttcatatgctattttttcctaaactaccttgacaagctta 38216058  T
Q  738 tgaa 741  Q
    ||||    
T  38216057 tgaa 38216054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 638 - 740
Target Start/End: Complemental strand, 8832595 - 8832493
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| |||||||| |  |||||||||| ||||||  |||| |||||||||  ||| |||| ||||||| ||||||||||| |||||||    
T  8832595 ttatgcaaataaataagcttttatgttaattcataagttttcactaacgaaaattgtatctttctaacctgtgttttcataaactaccttgaaaagctta 8832496  T
Q  738 tga 740  Q
    |||    
T  8832495 tga 8832493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 671 - 741
Target Start/End: Complemental strand, 12223957 - 12223887
Alignment:
Q  671 taagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttatgaa 741  Q
    ||||||||||||| ||||| | |||||||| |||||||||||||||| ||||||||||||| |||||||||    
T  12223957 taagttctcactaatgaaaatggtatcttcataaactgttttttcataaactaccttgacaggcttatgaa 12223887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 887550 - 887447
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||||||||| |||| |||||||| |  ||||||||||||  ||| ||||| |||||||||| ||| | | |||| ||| |||||||||||||||||||    
T  887550 ttatgcaaatagataagcttttatgttaattcataagttcttgctaatgaaaattgtatcttcataagcaggttttacataaactaccttgacaagctta 887451  T
Q  738 tgaa 741  Q
    ||||    
T  887450 tgaa 887447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 637 - 741
Target Start/End: Original strand, 7480846 - 7480949
Alignment:
Q  637 attatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctt 736  Q
    |||||||||||||||||  ||||||| |  |||||||||||| |||| ||||| |||||||||| |||  |||||||| || ||||||||| |||| |||    
T  7480846 attatgcaaataaataagtttttatgttaattcataagttctgactaatgaaaattgtatcttcctaagttgtttttt-ataaactaccttcacaaactt 7480944  T
Q  737 atgaa 741  Q
    |||||    
T  7480945 atgaa 7480949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 39592385 - 39592284
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||||||| |||||| ||||| |  || ||||||| |||||||||  |||| || ||||||||||| || | ||||||| |||||||||||||||||||    
T  39592385 ttatgcaaagaaataagcttttgt--ttattcataaattctcactaaagaaaattatatcttcttaagctttattttcataaactaccttgacaagctta 39592288  T
Q  738 tgaa 741  Q
    ||||    
T  39592287 tgaa 39592284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 4090627 - 4090524
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||||||||||||||  | || || |  |||||||||||||  ||  |||| |||||||||| ||| ||||||||||||| |||||||||||||| |||    
T  4090627 ttatgcaaataaataagttgttgtgttaattcataagttctcggtaacgaaaattgtatcttcgtaagctgttttttcattgactaccttgacaagatta 4090528  T
Q  738 tgaa 741  Q
    ||||    
T  4090527 tgaa 4090524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 638 - 740
Target Start/End: Complemental strand, 5903676 - 5903569
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctca-----ctattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaa 732  Q
    |||||||||||||||| |||||||| || ||| ||||||||||     |||   ||| |||||||||| |||  |||||||||||||||||| |||||||    
T  5903676 ttatgcaaataaataagcttttatgtttattcttaagttctcatctcactaacaaaaattgtatcttcataagatgttttttcattaactactttgacaa 5903577  T
Q  733 gcttatga 740  Q
    ||||||||    
T  5903576 gcttatga 5903569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 21788595 - 21788492
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| |||||||  |  |||||||| ||||||||  |||| || ||||||| |||  ||||||||||| ||||| ||| |||||||||    
T  21788595 ttatgcaaataaataagcttttatattaattcataagctctcactaacgaaaattttatcttcataagttgttttttcataaactatcttaacaagctta 21788496  T
Q  738 tgaa 741  Q
    ||||    
T  21788495 tgaa 21788492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 23956212 - 23956315
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||||||||||||||  ||||||| |  || ||||||||||| ||  |||| |||||||||  |||||||||||| ||| |||||| || |||| ||||    
T  23956212 ttatgcaaataaataagtttttatgttaatttataagttctcattaacgaaaattgtatctttataaactgtttttccataaactacatttacaaactta 23956311  T
Q  738 tgaa 741  Q
    ||||    
T  23956312 tgaa 23956315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 642 - 741
Target Start/End: Complemental strand, 29774879 - 29774780
Alignment:
Q  642 gcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttatgaa 741  Q
    |||||||||||| |||||| | |  |||||||||||||||||  |||| |||||| ||| ||| | |||||||||| ||||||||| |||| || |||||    
T  29774879 gcaaataaataagcttttacgttaattcataagttctcactaacgaaaattgtattttcataagccgttttttcataaactaccttaacaaactaatgaa 29774780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 638 - 724
Target Start/End: Original strand, 38471739 - 38471825
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactac 724  Q
    |||| |||||||||||| | ||||  |  |||||||||||||||||  |||| ||||| |||| |||||||||||||||| ||||||    
T  38471739 ttatacaaataaataaattgttatcttaattcataagttctcactaacgaaaattgtaccttcataaactgttttttcataaactac 38471825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 641 - 738
Target Start/End: Complemental strand, 11777119 - 11777022
Alignment:
Q  641 tgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttat 738  Q
    |||||||||||||  ||||||| | ||| ||||||||||||||   |||  ||||||||| ||| |||| ||||||| ||||| ||| ||||||||||    
T  11777119 tgcaaataaataaggttttatgttagtttataagttctcactaacaaaaagtgtatcttcataagctgtgttttcataaactaacttaacaagcttat 11777022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 638 - 743
Target Start/End: Original strand, 13056275 - 13056380
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||| |||||| |||| |||| ||| |  |||||||||||||  ||  |||| ||| |||||| ||| || |||||| || |||||||||||||||||||    
T  13056275 ttatacaaatagataagctttaatgttaattcataagttctcgttaacgaaaattgcatcttcataagctatttttttataaactaccttgacaagctta 13056374  T
Q  738 tgaaaa 743  Q
    ||||||    
T  13056375 tgaaaa 13056380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 42064989 - 42064886
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| |||||||  |  |||||||||||| ||||  |||| |  ||||||| |||  | |||||| || ||||||||| |||||||||    
T  42064989 ttatgcaaataaataagcttttatattaattcataagttcttactaacgaaaatgatatcttcataagttatttttttataaactaccttaacaagctta 42064890  T
Q  738 tgaa 741  Q
    ||||    
T  42064889 tgaa 42064886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 707 - 741
Target Start/End: Complemental strand, 11073015 - 11072981
Alignment:
Q  707 tgttttttcattaactaccttgacaagcttatgaa 741  Q
    ||||||||||| |||||||||||||||||||||||    
T  11073015 tgttttttcataaactaccttgacaagcttatgaa 11072981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 706 - 740
Target Start/End: Original strand, 33321419 - 33321453
Alignment:
Q  706 ctgttttttcattaactaccttgacaagcttatga 740  Q
    |||||||||||| ||||||||||||||||||||||    
T  33321419 ctgttttttcataaactaccttgacaagcttatga 33321453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 741
Target Start/End: Complemental strand, 12442897 - 12442848
Alignment:
Q  692 tgtatcttcttaaactgttttttcattaactaccttgacaagcttatgaa 741  Q
    ||||||||| ||| ||| |||||||| ||||| |||||||||||||||||    
T  12442897 tgtatcttcataagctgctttttcataaactatcttgacaagcttatgaa 12442848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 1e-21; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 7723026 - 7722965
Alignment:
Q  21 taatgaagttagaaattcagactaacagattaaaaaagttaagtttgtggaatgatcttgtt 82  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7723026 taatcaagttagaaattcagactaacagactaaaaaagttaagtttgtggaatgatcttgtt 7722965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 2255872 - 2255769
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||| |||||||||| |||||||| |  |||||| ||||||||||   ||| |||||||||| ||| |||||||||||| || |||||| |||||||||    
T  2255872 ttatgtaaataaataagcttttatgttaattcatatgttctcactaccaaaaattgtatcttcataagctgttttttcataaattaccttaacaagctta 2255773  T
Q  738 tgaa 741  Q
    ||||    
T  2255772 tgaa 2255769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 667 - 741
Target Start/End: Complemental strand, 13429565 - 13429490
Alignment:
Q  667 ttcataagttctcactat-tgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttatgaa 741  Q
    |||||||||||||||||  ||||| ||||||| || |||||||||||||||| |||||| ||||||||||||||||    
T  13429565 ttcataagttctcactaaatgaaaattgtatcctcataaactgttttttcataaactactttgacaagcttatgaa 13429490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 638 - 738
Target Start/End: Complemental strand, 10874122 - 10874022
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| |||||||| |  |||||||||| |||| |   ||| |||||||||| ||| ||||||| |||| ||||||||| |||||||||    
T  10874122 ttatgcaaataaataagcttttatgttaattcataagttttcaccaactaaaattgtatcttcataagctgttttctcataaactaccttaacaagctta 10874023  T
Q  738 t 738  Q
    |    
T  10874022 t 10874022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 2027124 - 2027227
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||||||||| ||||||||||||| |  |||||||||||| ||||   ||| |||||||||| ||| |||||||||||| ||||  |||||||| |||     
T  2027124 ttatgcaaatagataaacttttatgttaattcataagttcttactaacaaaagttgtatcttcataagctgttttttcataaactgtcttgacaaacttc 2027223  T
Q  738 tgaa 741  Q
    ||||    
T  2027224 tgaa 2027227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 10687448 - 10687345
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| ||||||||   |||||||||||||| |||  |||| |||||||| | |||  ||||||| ||| ||||||||| | | |||||    
T  10687448 ttatgcaaataaataagcttttatgtcagttcataagttctcgctaacgaaaattgtatctccataagttgtttttacataaactaccttaataggctta 10687349  T
Q  738 tgaa 741  Q
    ||||    
T  10687348 tgaa 10687345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 32675837 - 32675940
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||||||||||||||  ||||||  |  ||||||||||||||||| ||||| |||||||||| |||  | ||||||||| ||| |||||   |||||||    
T  32675837 ttatgcaaataaataagtttttatattaattcataagttctcactaatgaaaattgtatcttcataagttattttttcataaacaaccttacgaagctta 32675936  T
Q  738 tgaa 741  Q
    ||||    
T  32675937 tgaa 32675940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 638 - 739
Target Start/End: Complemental strand, 6758766 - 6758664
Alignment:
Q  638 ttatgcaaataaataaacttttatgattg-ttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctt 736  Q
    |||||||||||||||| |||||   |||  |||||||||||||||||  ||||||||||||||  |||  |  |||||||| ||||||||| ||||||||    
T  6758766 ttatgcaaataaataagctttttatattaattcataagttctcactaacgaaatttgtatcttgataagttaatttttcataaactaccttaacaagctt 6758667  T
Q  737 atg 739  Q
    |||    
T  6758666 atg 6758664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 673 - 739
Target Start/End: Complemental strand, 6776911 - 6776845
Alignment:
Q  673 agttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttatg 739  Q
    ||||||||||| |||||||||||||||| |||  | ||||| ||| ||||||||| |||||||||||    
T  6776911 agttctcactaatgaaatttgtatcttcataagttatttttccataaactaccttaacaagcttatg 6776845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 639 - 741
Target Start/End: Complemental strand, 8014925 - 8014823
Alignment:
Q  639 tatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttat 738  Q
    ||||||||| ||||| |||||||| |  || || |||| ||||||   ||| |||||||||| ||  | |||||||||| ||||||||||||||||||||    
T  8014925 tatgcaaattaataagcttttatgttaatttatcagttttcactaaccaaaattgtatcttcatatgcagttttttcataaactaccttgacaagcttat 8014826  T
Q  739 gaa 741  Q
    |||    
T  8014825 gaa 8014823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 10755231 - 10755331
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| |||||||| |  |||||||||||| ||||  |||| ||||   ||| ||| || ||||||||| |  ||||||||||||||||    
T  10755231 ttatgcaaataaataagcttttatgttaattcataagttcttactaacgaaaattgt---ttcataagctattttttcataagttaccttgacaagctta 10755327  T
Q  738 tgaa 741  Q
    ||||    
T  10755328 tgaa 10755331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 638 - 738
Target Start/End: Original strand, 2034177 - 2034277
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| |||||||| |   ||||||||| | |||   |||| |||||||||  |||  ||||||||||| |||||||||||||| ||||    
T  2034177 ttatgcaaataaataagcttttatgttgaatcataagttattacttacgaaaattgtatcttggtaagttgttttttcataaactaccttgacaaactta 2034276  T
Q  738 t 738  Q
    |    
T  2034277 t 2034277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 645 - 729
Target Start/End: Original strand, 9202354 - 9202438
Alignment:
Q  645 aataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttga 729  Q
    ||||||||| |||||||| |  |||||||||| |||||| | ||| |||||||||| ||  |||||||||||| |||| ||||||    
T  9202354 aataaataagcttttatgttaattcataagttatcactaataaaaattgtatcttcatatgctgttttttcataaactgccttga 9202438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 25430714 - 25430817
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgtttttt-cattaactaccttgacaagctt 736  Q
    ||||||||| |||||||||||||   |  ||||||| ||||||||    ||||| |||||||| ||| ||||||||| ||| ||||||||||||||||||    
T  25430714 ttatgcaaagaaataaacttttaccttaattcataatttctcactgacaaaatt-gtatcttcataagctgtttttttcataaactaccttgacaagctt 25430812  T
Q  737 atgaa 741  Q
    |||||    
T  25430813 atgaa 25430817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 6958762 - 6958659
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||||| |||||||| |||||||  |  || |||| |||||||||  |||| ||||||||||  || ||| |||||||  ||||||||||| |||||||    
T  6958762 ttatgcacataaataagcttttatactaatttataacttctcactaaagaaaattgtatcttcacaagctgctttttcacaaactaccttgagaagctta 6958663  T
Q  738 tgaa 741  Q
    ||||    
T  6958662 tgaa 6958659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 23239385 - 23239282
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| |||||||  |  |||||||||||||||||  |||| ||||||| || |||  || ||||| || ||| || || |||||||||    
T  23239385 ttatgcaaataaataagcttttatattaattcataagttctcactaaggaaagttgtatcgtcataatttgctttttgataaaccacgttaacaagctta 23239286  T
Q  738 tgaa 741  Q
    ||||    
T  23239285 tgaa 23239282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 638 - 736
Target Start/End: Original strand, 35071376 - 35071475
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaact-gttttttcattaactaccttgacaagctt 736  Q
    |||||||||||||||| |||||||| |  ||||||||||||||| |   ||  ||| |||||| ||| ||  ||||||||| ||||||||||||||||||    
T  35071376 ttatgcaaataaataagcttttatgttaattcataagttctcacaaaaaaacattgcatcttcataagctatttttttcataaactaccttgacaagctt 35071475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 670 - 724
Target Start/End: Original strand, 32165241 - 32165295
Alignment:
Q  670 ataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactac 724  Q
    ||||| ||||||||  |||| |||||||||| |||||||||||||||| ||||||    
T  32165241 ataagctctcactaacgaaaattgtatcttcataaactgttttttcataaactac 32165295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 683
Target Start/End: Original strand, 9201669 - 9201714
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcacta 683  Q
    |||||||||||||||| |||||||| |  |||||||||||||||||    
T  9201669 ttatgcaaataaataagcttttatgttaattcataagttctcacta 9201714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 1e-21; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 638 - 739
Target Start/End: Complemental strand, 36741042 - 36740941
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| ||||| || |  ||||||||||||||||| ||||| |||||||||| | |||||| ||||||| |||||| ||||||||||||    
T  36741042 ttatgcaaataaataagcttttgtgttgattcataagttctcactaatgaaaattgtatcttcatgaactgtattttcataaactactttgacaagctta 36740943  T
Q  738 tg 739  Q
    ||    
T  36740942 tg 36740941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 17222967 - 17222864
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||| |||||||||||  ||||||| |  |||||||||||| ||||  |||| |||||||||| ||| |||||||||||| |||||||||||||||||||    
T  17222967 ttattcaaataaataagtttttatgttaattcataagttctaactaacgaaaattgtatcttcataatctgttttttcataaactaccttgacaagctta 17222868  T
Q  738 tgaa 741  Q
    ||||    
T  17222867 tgaa 17222864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 36254984 - 36255087
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||||| |||||||| |||||||| |  ||||||||||||||||| | ||| |||||||||| ||| |||||||||||  |||||| ||||||||||||    
T  36254984 ttatgcagataaataagcttttatgttaattcataagttctcactaattaaaattgtatcttcataagctgttttttcacaaactacgttgacaagctta 36255083  T
Q  738 tgaa 741  Q
    ||||    
T  36255084 tgaa 36255087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 48591372 - 48591475
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| |||||| | |  |||||||||||||| ||  |||| |||||||||| ||| |||||||||||| |||||||||||||||| ||    
T  48591372 ttatgcaaataaataagcttttacgttaattcataagttctcattaacgaaaattgtatcttcataagctgttttttcataaactaccttgacaagcgta 48591471  T
Q  738 tgaa 741  Q
    ||||    
T  48591472 tgaa 48591475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 7148910 - 7148807
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| |||||||| |  |||||||||||| ||||  |||| |||||| ||  ||| |||||||||||  |||||||||||||||||||    
T  7148910 ttatgcaaataaataagcttttatgctaattcataagttctgactaaagaaaattgtatttttataagctgttttttcaaaaactaccttgacaagctta 7148811  T
Q  738 tgaa 741  Q
    ||||    
T  7148810 tgaa 7148807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 28663710 - 28663608
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||| ||| ||| |||||||| | ||||||||||||||| ||  |||| ||||||||||  || |||||||||||| |||||||||||||||||||    
T  28663710 ttatgcaactaattaagcttttatgttagttcataagttctca-taacgaaaattgtatcttcagaatctgttttttcataaactaccttgacaagctta 28663612  T
Q  738 tgaa 741  Q
    ||||    
T  28663611 tgaa 28663608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 637 - 726
Target Start/End: Complemental strand, 22273919 - 22273830
Alignment:
Q  637 attatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactacct 726  Q
    |||||||||||||||||||||||||| |  ||||||| |||||||||   ||| |||||||||| ||| |||||||||||| ||||||||    
T  22273919 attatgcaaataaataaacttttatgttaattcataacttctcactaacaaaaattgtatcttcataagctgttttttcataaactacct 22273830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 29877777 - 29877674
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||||||||| |||| |||||||| |  |||||||||||||||||   ||| |||||||||| ||| ||| |||||||| |||||||||  ||||||||    
T  29877777 ttatgcaaatatataagcttttatgttaattcataagttctcactaacaaaaattgtatcttcataagctgctttttcataaactaccttagcaagctta 29877678  T
Q  738 tgaa 741  Q
    ||||    
T  29877677 tgaa 29877674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 41229041 - 41228938
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||| | |||||||  |  |||||||||||| |||| ||||| |||||||||| | |  ||||||||||| ||||||||| |||||||||    
T  41229041 ttatgcaaataaattagcttttatattaattcataagttctaactaatgaaaattgtatcttcatcagttgttttttcataaactaccttaacaagctta 41228942  T
Q  738 tgaa 741  Q
    ||||    
T  41228941 tgaa 41228938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 46704218 - 46704321
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||| |||  ||||||  |  ||||||||||||||||| ||||| || ||||||| ||| |||||||||||| ||||||||| ||||||| |    
T  46704218 ttatgcaaataagtaactttttatattaattcataagttctcactaatgaaaattttatcttcataagctgttttttcataaactaccttaacaagctca 46704317  T
Q  738 tgaa 741  Q
    ||||    
T  46704318 tgaa 46704321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 667 - 741
Target Start/End: Complemental strand, 23335751 - 23335677
Alignment:
Q  667 ttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttatgaa 741  Q
    ||||||||||||||||  ||||| |||||||||| ||| |||||||||||| ||||||||||| | |||||||||    
T  23335751 ttcataagttctcacttatgaaaattgtatcttcataagctgttttttcataaactaccttgatatgcttatgaa 23335677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 687 - 741
Target Start/End: Complemental strand, 35124476 - 35124422
Alignment:
Q  687 aaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttatgaa 741  Q
    |||||||||||||| ||| |||||||||||| |||||||||||||||||||||||    
T  35124476 aaatttgtatcttcataagctgttttttcataaactaccttgacaagcttatgaa 35124422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 638 - 735
Target Start/End: Original strand, 18630843 - 18630940
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagct 735  Q
    |||||||||||||||| |||||||  |  |||||||||||||||||  ||||  | ||||||| ||| |||||||||||| ||||||||| |||||||    
T  18630843 ttatgcaaataaataagcttttatattaattcataagttctcactaacgaaaactttatcttcataagctgttttttcataaactaccttaacaagct 18630940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 638 - 738
Target Start/End: Original strand, 488332 - 488432
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||| |||||||||| |||||||| |  ||||||||||||||||| | ||| |||||||||   || |  ||||||||| |||||||||||||||||||    
T  488332 ttatggaaataaataagcttttatgttaattcataagttctcactaataaaaattgtatctttacaagcaattttttcataaactaccttgacaagctta 488431  T
Q  738 t 738  Q
    |    
T  488432 t 488432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 897108 - 897005
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| |||||||  |  || ||||||| ||||||  |||| | |||||| | |||| ||||||||||| |||||| ||||||||||||    
T  897108 ttatgcaaataaataagcttttatattaatttataagttttcactaacgaaaatcgtatctacgtaaattgttttttcataaactacattgacaagctta 897009  T
Q  738 tgaa 741  Q
    ||||    
T  897008 tgaa 897005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 28074502 - 28074400
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||||||||||||||  ||||||| |  |||| ||||| || |||  |||| |||||||||| ||| || ||||||||| |||||||||||||||||||    
T  28074502 ttatgcaaataaataagattttatgttatttcacaagttttcgctaacgaaaattgtatcttcataagct-ttttttcataaactaccttgacaagctta 28074404  T
Q  738 tgaa 741  Q
    ||||    
T  28074403 tgaa 28074400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 12495592 - 12495697
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactacc--ttgacaagct 735  Q
    ||||||||||||||||  ||||||| |  || |||||||||||||| ||||  |||||||||  | | |||||||||||| |||||||  ||||||||||    
T  12495592 ttatgcaaataaataagtttttatgttaatttataagttctcactaatgaatattgtatcttgattagctgttttttcataaactaccttttgacaagct 12495691  T
Q  736 tatgaa 741  Q
    ||||||    
T  12495692 tatgaa 12495697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 638 - 700
Target Start/End: Original strand, 34526285 - 34526347
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttc 700  Q
    |||||||||||||||| |||||||| |  |||||||||||||||||| |||| ||||||||||    
T  34526285 ttatgcaaataaataagcttttatgttaattcataagttctcactatggaaaattgtatcttc 34526347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 23297573 - 23297473
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| |||||||| |  ||||||||||||| |||   ||| |||||||||| ||| |||   |||||| |||||||||||||| ||||    
T  23297573 ttatgcaaataaataagcttttatgctaattcataagttctcgctaacaaaaattgtatcttcataagctg---tttcataaactaccttgacaaactta 23297477  T
Q  738 tgaa 741  Q
    ||||    
T  23297476 tgaa 23297473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 638 - 699
Target Start/End: Complemental strand, 48687072 - 48687011
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatctt 699  Q
    |||||||||||||||||||| |||| |  ||||||||||||||||| ||||| |||||||||    
T  48687072 ttatgcaaataaataaacttatatgttaattcataagttctcactaatgaaaattgtatctt 48687011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 639 - 738
Target Start/End: Original strand, 2702664 - 2702763
Alignment:
Q  639 tatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttat 738  Q
    ||||||||||| ||| |||||||| |  |||||||| ||| |||| ||||| |||||| ||| |||  ||| ||||||||||||||||| |||| |||||    
T  2702664 tatgcaaataattaagcttttatgttaattcataagatcttactaatgaaaattgtatattcataagttgtcttttcattaactaccttaacaaacttat 2702763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 38345770 - 38345872
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||| |||||||||| |||||||| |  ||||||||||||  ||| | ||| |||||||||| |||  ||||||||||| |||||| ||||||| ||||    
T  38345770 ttatgtaaataaataagcttttatgttaattcataagttctggctaataaaaattgtatcttcataagttgttttttcataaactactttgacaa-ctta 38345868  T
Q  738 tgaa 741  Q
    ||||    
T  38345869 tgaa 38345872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 42611817 - 42611918
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| |||||||| |  |||||||||| ||||||  ||||  ||||||||| |||  ||||||||||| ||||| || ||||||||||    
T  42611817 ttatgcaaataaataagcttttatgttaattcataagttgtcacta-cgaaaactgtatcttcataagttgttttttcataaacta-ctcgacaagctta 42611914  T
Q  738 tgaa 741  Q
    ||||    
T  42611915 tgaa 42611918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 724
Target Start/End: Complemental strand, 15184652 - 15184598
Alignment:
Q  670 ataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactac 724  Q
    ||||||||||||||  |||| |||||||||| |||||||||||||||| ||||||    
T  15184652 ataagttctcactaacgaaaattgtatcttcataaactgttttttcataaactac 15184598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 638 - 727
Target Start/End: Original strand, 4603280 - 4603369
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactacctt 727  Q
    ||||| |||||||||| |||||||  |  || ||||  ||||||||  |||| |||||||||| |||||||||||||||| |||||||||    
T  4603280 ttatgtaaataaataagcttttattttaatttataaactctcactaacgaaaattgtatcttcataaactgttttttcataaactacctt 4603369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 656 - 741
Target Start/End: Complemental strand, 33534048 - 33533963
Alignment:
Q  656 ttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttatgaa 741  Q
    ||||||| | ||||||||||||||||||  |||| |||||| ||| |   |||||||||||| |||||||||||| | ||||||||    
T  33534048 ttttatgttagttcataagttctcactaacgaaaattgtatattcgtgggctgttttttcataaactaccttgactaacttatgaa 33533963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 638 - 714
Target Start/End: Original strand, 9153530 - 9153606
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgtttttt 714  Q
    ||||||||||||||||||||||||| |  || |||| ||||||||  ||||| |||||| ||  |||||||||||||    
T  9153530 ttatgcaaataaataaacttttatgttaatttataaattctcactgatgaaaattgtattttaataaactgtttttt 9153606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 741
Target Start/End: Original strand, 43699463 - 43699534
Alignment:
Q  672 aagttctcactattgaaatttgtatcttcttaaa--ctgttttttcattaactaccttgacaagcttatgaa 741  Q
    |||||| ||||| ||||| |||||||||| |||   |||||||||||| |||||| ||||||||||||||||    
T  43699463 aagttcccactaatgaaaattgtatcttcataagagctgttttttcataaactacattgacaagcttatgaa 43699534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 670 - 738
Target Start/End: Original strand, 52274100 - 52274168
Alignment:
Q  670 ataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttat 738  Q
    |||||||||||||   |||| |||||||||| ||| |||||||||| | ||||||||||| ||||||||    
T  52274100 ataagttctcactgacgaaaattgtatcttcataagctgttttttcgtaaactaccttgataagcttat 52274168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 638 - 713
Target Start/End: Original strand, 11256609 - 11256684
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttt 713  Q
    |||||||||||||||| |||||||| |  ||||||||||||| |||   ||| |||||||||| ||| ||||||||    
T  11256609 ttatgcaaataaataagcttttatgttaattcataagttctcgctaactaaaattgtatcttcataagctgttttt 11256684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 654 - 741
Target Start/End: Complemental strand, 32628900 - 32628813
Alignment:
Q  654 acttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttatgaa 741  Q
    ||||||||| |  ||| ||||||||||||  | ||| ||||||||||  || |||||||||||| || ||||| ||||||||||||||    
T  32628900 acttttatgttaattcgtaagttctcactgatcaaaattgtatcttcacaagctgttttttcataaattacctcgacaagcttatgaa 32628813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 638 - 724
Target Start/End: Complemental strand, 9319186 - 9319100
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactac 724  Q
    ||||| |||||||||| |||||||| |  ||  |||||| ||| || ||||| ||||| |||| |||||||||||||||| ||||||    
T  9319186 ttatgtaaataaataagcttttatgttaatttttaagttttcagtaatgaaaattgtagcttcataaactgttttttcataaactac 9319100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 639 - 700
Target Start/End: Original strand, 2330422 - 2330483
Alignment:
Q  639 tatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttc 700  Q
    |||||| ||||||||||||||||  |  ||||||||||||||| | ||||| ||||||||||    
T  2330422 tatgcagataaataaacttttattttatttcataagttctcacaaatgaaaattgtatcttc 2330483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 683
Target Start/End: Complemental strand, 11298720 - 11298675
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcacta 683  Q
    |||||||||||||||||||||||| ||  ||| |||||||||||||    
T  11298720 ttatgcaaataaataaacttttataataattcttaagttctcacta 11298675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 2e-20; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 30181688 - 30181585
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| |||||||| |  ||||||||||| ||||| |||||   |||||||| ||| ||||||||| || |||||||||||||||||||    
T  30181688 ttatgcaaataaataagcttttatgttaattcataagttcccactaatgaaaacagtatcttcataagctgttttttgataaactaccttgacaagctta 30181589  T
Q  738 tgaa 741  Q
    ||||    
T  30181588 tgaa 30181585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 640 - 741
Target Start/End: Original strand, 14691249 - 14691350
Alignment:
Q  640 atgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttatg 739  Q
    |||||||||||||| |||||||| |  |||||||||||||||||  |||| || ||||||| |||| ||||||||||| || ||| ||||||||||||||    
T  14691249 atgcaaataaataaccttttatgttaattcataagttctcactaacgaaaattatatcttcataaattgttttttcataaattacattgacaagcttatg 14691348  T
Q  740 aa 741  Q
    ||    
T  14691349 aa 14691350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 638 - 732
Target Start/End: Complemental strand, 29378783 - 29378689
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaa 732  Q
    |||||||||||||||| |||||| | |  |||||||||||| ||||  |||| |||||||||| ||| |||||||||||| ||||||||||||||    
T  29378783 ttatgcaaataaataagcttttacgttaattcataagttcttactaacgaaaattgtatcttcataagctgttttttcataaactaccttgacaa 29378689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 638 - 739
Target Start/End: Complemental strand, 46744091 - 46743991
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||| |||||||||| |||||||| |  ||| |||||||||||||  |||| |||||||||| ||  |||||||||||||||||||| |||||||||||    
T  46744091 ttatgaaaataaataagcttttatgttaattcgtaagttctcactaacgaaaattgtatcttcatatgctgttttttcattaactacc-tgacaagctta 46743993  T
Q  738 tg 739  Q
    ||    
T  46743992 tg 46743991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 638 - 738
Target Start/End: Original strand, 47654362 - 47654462
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||||||||||||||  ||||||  |  |||||||||||||||||  |||| ||||| |||| |||||||||||||||| |||||| || |||||||||    
T  47654362 ttatgcaaataaataagtttttatcttaattcataagttctcactaacgaaaattgtaccttcataaactgttttttcataaactacattaacaagctta 47654461  T
Q  738 t 738  Q
    |    
T  47654462 t 47654462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 34923071 - 34922966
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactg--ttttttcattaactaccttgacaagct 735  Q
    |||||||||||||||| |||||||| | ||||||||||||||||||  ||||  |||||||||  || |||  |||||| || |||||||||||||| ||    
T  34923071 ttatgcaaataaataagcttttatgttagttcataagttctcactaacgaaaagtgtatcttcacaagctgtttttttttataaactaccttgacaaact 34922972  T
Q  736 tatgaa 741  Q
    ||||||    
T  34922971 tatgaa 34922966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 640 - 741
Target Start/End: Complemental strand, 38372694 - 38372593
Alignment:
Q  640 atgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttatg 739  Q
    |||||||||||| | |||||||| |  |||||||||||||||||  |||| |||| ||||||| | ||| |||||| | |||||||||||||| ||||||    
T  38372694 atgcaaataaatcagcttttatgttaattcataagttctcactaacgaaaattgtttcttcttgagctgctttttcgtaaactaccttgacaaacttatg 38372595  T
Q  740 aa 741  Q
    ||    
T  38372594 aa 38372593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 670 - 741
Target Start/End: Complemental strand, 17944759 - 17944688
Alignment:
Q  670 ataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttatgaa 741  Q
    |||||||||||||| || ||||||||||||| |||  |||||||  || |||||||||||||||||||||||    
T  17944759 ataagttctcactaatgtaatttgtatcttcataagttgtttttctataaactaccttgacaagcttatgaa 17944688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 44613421 - 44613524
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| |||||||  |  |||||||||||| | || | ||| ||||||| || |||  ||||||||||| ||||||||| |||||||||    
T  44613421 ttatgcaaataaataagcttttatattaattcataagttctaattaataaaaattgtatcgtcataagttgttttttcataaactaccttaacaagctta 44613520  T
Q  738 tgaa 741  Q
    ||||    
T  44613521 tgaa 44613524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 29390499 - 29390601
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| |||||||| |  ||||||| ||||  |||  |||| |||||||||| |||  || |||||||| ||||||||| |||||||||    
T  29390499 ttatgcaaataaataagcttttatgttaattcataaattctagctaacgaaaattgtatcttcataagttg-tttttcataaactacctttacaagctta 29390597  T
Q  738 tgaa 741  Q
    ||||    
T  29390598 tgaa 29390601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 638 - 738
Target Start/End: Original strand, 43818826 - 43818927
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgt-atcttcttaaactgttttttcattaactaccttgacaagctt 736  Q
    ||||||||||||||||  ||||||  |  ||||||||||||||||| ||||| |||| | |||| |||||||||||||||| ||  || || ||||||||    
T  43818826 ttatgcaaataaataagtttttatcttaattcataagttctcactaatgaaaattgtaaccttcataaactgttttttcataaataacattaacaagctt 43818925  T
Q  737 at 738  Q
    ||    
T  43818926 at 43818927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 638 - 738
Target Start/End: Complemental strand, 22032900 - 22032800
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||||||||||||||  ||||||  |  || ||||||||||||||  |||| ||||| |||| |||| ||||||||||| |||||| || ||| |||||    
T  22032900 ttatgcaaataaataagtttttatcttaatttataagttctcactaacgaaaattgtaccttcataaattgttttttcataaactacattaacatgctta 22032801  T
Q  738 t 738  Q
    |    
T  22032800 t 22032800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 673 - 742
Target Start/End: Original strand, 37779265 - 37779336
Alignment:
Q  673 agttctcactattgaaatttgtatcttcttaaactgtttttt--cattaactaccttgacaagcttatgaaa 742  Q
    |||||||||||  |||| |||||| ||| ||| |||||||||  ||| ||||||||||||||||||||||||    
T  37779265 agttctcactaacgaaagttgtattttcataagctgttttttttcataaactaccttgacaagcttatgaaa 37779336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 39279568 - 39279464
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcact-attgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctt 736  Q
    |||| ||||||||||| |||||||| |  |||||| ||||||| | |  |||| |||||||||| ||| ||| |||||||| ||| ||||| ||||||||    
T  39279568 ttatacaaataaataagcttttatgttaattcataggttctcaattaacgaaaattgtatcttcctaagctgatttttcataaaccaccttaacaagctt 39279469  T
Q  737 atgaa 741  Q
    |||||    
T  39279468 atgaa 39279464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 667 - 734
Target Start/End: Original strand, 6406849 - 6406916
Alignment:
Q  667 ttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagc 734  Q
    |||||| ||||||| ||  |||| ||| |||||| ||| |||||||||||| ||||||||||||||||    
T  6406849 ttcataggttctcattagcgaaaattgcatcttcataagctgttttttcataaactaccttgacaagc 6406916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 667 - 738
Target Start/End: Complemental strand, 16012807 - 16012736
Alignment:
Q  667 ttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttat 738  Q
    |||||||||| ||||||  |||| ||||||||||  || | |||||||||| |||||| |||||||||||||    
T  16012807 ttcataagttttcactaacgaaaattgtatcttcagaagcagttttttcataaactactttgacaagcttat 16012736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 686 - 741
Target Start/End: Complemental strand, 20888664 - 20888609
Alignment:
Q  686 gaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttatgaa 741  Q
    |||| |||||||||| |||| ||||||||||| |||||||||  ||||||||||||    
T  20888664 gaaaattgtatcttcataaattgttttttcataaactacctttgcaagcttatgaa 20888609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 646 - 741
Target Start/End: Original strand, 23356447 - 23356542
Alignment:
Q  646 ataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttatgaa 741  Q
    |||||||| |||||||| |  |||||| ||||||||||   ||| | |||| ||| |||||||||||||||| || ||||||||||| ||| ||||    
T  23356447 ataaataagcttttatgttaattcataggttctcactaacaaaaatagtattttcataaactgttttttcataaattaccttgacaaacttgtgaa 23356542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 685 - 727
Target Start/End: Original strand, 14675955 - 14675997
Alignment:
Q  685 tgaaatttgtatcttcttaaactgttttttcattaactacctt 727  Q
    ||||| |||||||||| |||||||||||||||| |||||||||    
T  14675955 tgaaaattgtatcttcataaactgttttttcataaactacctt 14675997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 47511183 - 47511078
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcact--attgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagct 735  Q
    |||||||  |||||||  ||||||| |  |||||||||||||||   | ||||| |||||||||| ||| ||||||||||||  ||| |||| |||||||    
T  47511183 ttatgcagttaaataattttttatgttaattcataagttctcaccccaatgaaaattgtatcttcataagctgttttttcatagacttccttaacaagct 47511084  T
Q  736 tatgaa 741  Q
    ||||||    
T  47511083 tatgaa 47511078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 683
Target Start/End: Complemental strand, 33204972 - 33204927
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcacta 683  Q
    |||||||||||||||| |||||||| |  |||||||||||||||||    
T  33204972 ttatgcaaataaataagcttttatgttaattcataagttctcacta 33204927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 637 - 714
Target Start/End: Original strand, 49104315 - 49104392
Alignment:
Q  637 attatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgtttttt 714  Q
    |||||||||||||||||| ||||||| |  ||||||| ||||||||  | ||| |  |||||||||||||| ||||||    
T  49104315 attatgcaaataaataaatttttatgttaattcataaattctcactcataaaaatcatatcttcttaaactctttttt 49104392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 4e-19; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 16972304 - 16972408
Alignment:
Q  638 ttatgcaaataaataaacttttatgattg-ttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactacctt-gacaagct 735  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||||  |||| |||||||||| ||| |||||||||||| ||||||||| ||||| ||    
T  16972304 ttatgcaaataaataaacttttat-attgattcataagttatcactaacgaaaattgtatcttcataagctgttttttcatgaactaccttagacaaact 16972402  T
Q  736 tatgaa 741  Q
    ||||||    
T  16972403 tatgaa 16972408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 638 - 737
Target Start/End: Complemental strand, 32131578 - 32131479
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||||||||| |||| |||||||| |  ||||||||||||||||||||||| |||||||||| ||   ||||| ||||| |||||||||||||| ||||    
T  32131578 ttatgcaaatagataagcttttatgttaattcataagttctcactattgaaaattgtatcttcataggttgtttattcataaactaccttgacaaactta 32131479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 10298875 - 10298977
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||||||||| |||  |||||||| |  |||||||||||||| ||   ||| |||||||||| ||| |||||||||||| |||||||||||||||||||    
T  10298875 ttatgcaaatagatag-cttttatgttaattcataagttctcattaacaaaaattgtatcttcataagctgttttttcataaactaccttgacaagctta 10298973  T
Q  738 tgaa 741  Q
    ||||    
T  10298974 tgaa 10298977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 32975825 - 32975722
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| |||||||  |  ||||||||||||||| |   ||| |||||||||| |||  ||| ||||||| |||||||||||||||||||    
T  32975825 ttatgcaaataaataagcttttatattaattcataagttctcacaaacaaaaattgtatcttcataagttgtgttttcataaactaccttgacaagctta 32975726  T
Q  738 tgaa 741  Q
    ||||    
T  32975725 tgaa 32975722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 34286512 - 34286614
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| |||||||  |  ||||||||||||| |||  |||| |||||||||| ||| ||| |||||||  |||||||||||||||||||    
T  34286512 ttatgcaaataaataagcttttatattaattcataagttctccctaacgaaaattgtatcttcataagctg-tttttcacaaactaccttgacaagctta 34286610  T
Q  738 tgaa 741  Q
    ||||    
T  34286611 tgaa 34286614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 686 - 741
Target Start/End: Original strand, 35168437 - 35168492
Alignment:
Q  686 gaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttatgaa 741  Q
    |||| |||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  35168437 gaaaattgtatcttcataaactgttttttcataaactaccttgacaagcttatgaa 35168492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 644 - 731
Target Start/End: Complemental strand, 8752938 - 8752851
Alignment:
Q  644 aaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgaca 731  Q
    |||||||||| |||||||| |  ||||||||||||||| |   |||||||||||||||||| |||||||||||| || ||| ||||||    
T  8752938 aaataaataagcttttatgttaattcataagttctcacaaacaaaatttgtatcttcttaagctgttttttcataaattactttgaca 8752851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 24350467 - 24350570
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||||||||||||||  ||||||| |  |||||||||||| ||||  |||| || ||||||| ||| || ||||||||| || ||| ||||||||||||    
T  24350467 ttatgcaaataaataagattttatgttaattcataagttcttactaacgaaaattatatcttcataagctattttttcataaattacgttgacaagctta 24350566  T
Q  738 tgaa 741  Q
    ||||    
T  24350567 tgaa 24350570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 638 - 738
Target Start/End: Original strand, 9131076 - 9131176
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||||||||||||||||||||||| |  |||||||||||  ||||  |||| |||||||||| ||| |||||| ||||  |||||  | ||||||||||    
T  9131076 ttatgcaaataaataaacttttatgttaattcataagttccgactaacgaaaattgtatcttcataagctgtttcttcagaaactaaatcgacaagctta 9131175  T
Q  738 t 738  Q
    |    
T  9131176 t 9131176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 638 - 703
Target Start/End: Original strand, 32212963 - 32213028
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttctta 703  Q
    |||||||||||||||| |||||||| |  || |||||||||||||| ||||| |||| ||||||||    
T  32212963 ttatgcaaataaataagcttttatgttattttataagttctcactaatgaaaattgtgtcttctta 32213028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 35286066 - 35285963
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||| ||||||||||| |||| | | |  ||||||||||||| ||| | ||| |||||||||| ||| |  ||||||||| |||||| ||||| ||||||    
T  35286066 ttatacaaataaataagctttcacgttaattcataagttctcgctactaaaaattgtatcttcataagcatttttttcataaactactttgacgagctta 35285967  T
Q  738 tgaa 741  Q
    ||||    
T  35285966 tgaa 35285963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 41145344 - 41145446
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    ||||||||||||||||  || |||  |  ||||||||||||||||| ||||| | ||||||| | ||  ||||||||||| ||||||||| |||| ||||    
T  41145344 ttatgcaaataaataagtttatatattaattcataagttctcactaatgaaaatcgtatctt-taaagttgttttttcataaactaccttaacaaactta 41145442  T
Q  738 tgaa 741  Q
    ||||    
T  41145443 tgaa 41145446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 638 - 700
Target Start/End: Original strand, 9130965 - 9131027
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttc 700  Q
    ||||||||||||||||||||||||| |  |||||||||||  ||||  |||| ||||||||||    
T  9130965 ttatgcaaataaataaacttttatgttaattcataagttccgactaacgaaaattgtatcttc 9131027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 638 - 732
Target Start/End: Original strand, 36907592 - 36907686
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaa 732  Q
    |||||||||||||||| |||||||| |  |||||||| ||| ||||  |||| |||||| |||  ||  ||||||||||| ||||||||| ||||    
T  36907592 ttatgcaaataaataagcttttatgctaattcataagatcttactaacgaaaattgtatattcacaagttgttttttcataaactaccttaacaa 36907686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 691 - 741
Target Start/End: Complemental strand, 38895744 - 38895694
Alignment:
Q  691 ttgtatcttcttaaactgttttttcattaactaccttgacaagcttatgaa 741  Q
    |||||||||| |||| | ||||||||| ||||||||| |||||||||||||    
T  38895744 ttgtatcttcataaattattttttcataaactaccttaacaagcttatgaa 38895694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 735
Target Start/End: Original strand, 25465795 - 25465891
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagct 735  Q
    |||||||||||||||| |||||||| |  |||||||||| ||| ||   ||| |||||||||| |||  || |||||||| |||| ||||||||||||    
T  25465795 ttatgcaaataaataagcttttatgttaattcataagttttcagtaacaaaaattgtatcttcataagttg-tttttcataaacttccttgacaagct 25465891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 670 - 727
Target Start/End: Original strand, 37410893 - 37410950
Alignment:
Q  670 ataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactacctt 727  Q
    ||||||||| ||||  |||| |||||||||| | |||||||||||||| |||||||||    
T  37410893 ataagttcttactaacgaaaattgtatcttcatgaactgttttttcataaactacctt 37410950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 727
Target Start/End: Original strand, 42363265 - 42363354
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactacctt 727  Q
    ||||| |||||||||| |||||||  |  || | ||||||||||||   ||| |||||||||| ||||| |||||||||| |||||||||    
T  42363265 ttatgtaaataaataagcttttattttaatttaaaagttctcactaacaaaaattgtatcttcataaacggttttttcataaactacctt 42363354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 638 - 741
Target Start/End: Complemental strand, 24885 - 24780
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactacc--ttgacaagct 735  Q
    ||||||||||||||||  ||||||| |  || |||||||||||||| ||||  |||||||||  | | |||||||||||| |||||||  ||||||||||    
T  24885 ttatgcaaataaataagtttttatgttaatttataagttctcactaatgaatattgtatcttgattagctgttttttcataaactaccttttgacaagct 24786  T
Q  736 tatgaa 741  Q
    ||||||    
T  24785 tatgaa 24780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 24337 - 24440
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||  ||||||||||  |||| ||||| | ||||  |||| || ||||||| |||  |||| ||| || |||||||||||||||||||    
T  24337 ttatgcaaataaataggcttttatgataattcacaagtttttactaacgaaaattatatcttcgtaagttgttattttatcaactaccttgacaagctta 24436  T
Q  738 tgaa 741  Q
    ||||    
T  24437 tgaa 24440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 667 - 741
Target Start/End: Original strand, 97186 - 97257
Alignment:
Q  667 ttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttatgaa 741  Q
    |||||||||||||||||  |||| ||||||| |   || |||||||||||| |||||||||||| ||||||||||    
T  97186 ttcataagttctcactaacgaaaattgtatcat---aagctgttttttcataaactaccttgactagcttatgaa 97257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 638 - 741
Target Start/End: Original strand, 14694 - 14797
Alignment:
Q  638 ttatgcaaataaataaacttttatgattgttcataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagctta 737  Q
    |||||||||||||||| |||| ||| |  || ||||||||||||||  |||| |||||| ||  ||||||| |||||||| |||||| || | || ||||    
T  14694 ttatgcaaataaataagctttcatgttaatttataagttctcactaacgaaaattgtatatttataaactgatttttcataaactacatttaaaaactta 14793  T
Q  738 tgaa 741  Q
    ||||    
T  14794 tgaa 14797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 670 - 739
Target Start/End: Complemental strand, 1164 - 1095
Alignment:
Q  670 ataagttctcactattgaaatttgtatcttcttaaactgttttttcattaactaccttgacaagcttatg 739  Q
    |||||||||||||| |||||||||||||||| |||  | ||||| ||| || |||||| |||| ||||||    
T  1164 ataagttctcactaatgaaatttgtatcttcataagttatttttccataaattaccttaacaatcttatg 1095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University