View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1898_high_2 (Length: 682)

Name: NF1898_high_2
Description: NF1898
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1898_high_2
NF1898_high_2
[»] chr5 (27 HSPs)
chr5 (39-484)||(26619860-26620307)
chr5 (483-669)||(12278860-12279047)
chr5 (474-669)||(31680339-31680534)
chr5 (483-669)||(17332551-17332738)
chr5 (490-669)||(37254628-37254808)
chr5 (483-657)||(31501728-31501903)
chr5 (517-669)||(33430335-33430488)
chr5 (503-666)||(10033927-10034091)
chr5 (503-669)||(13817977-13818144)
chr5 (504-669)||(26283318-26283484)
chr5 (503-666)||(39657509-39657673)
chr5 (505-668)||(1776377-1776541)
chr5 (482-669)||(36291350-36291538)
chr5 (503-669)||(36293621-36293788)
chr5 (503-669)||(39434696-39434863)
chr5 (521-669)||(16155015-16155164)
chr5 (505-669)||(19985941-19986106)
chr5 (533-658)||(16333887-16334013)
chr5 (503-653)||(3155647-3155798)
chr5 (522-669)||(43068896-43069044)
chr5 (516-628)||(28801300-28801415)
chr5 (483-533)||(26543902-26543952)
chr5 (485-552)||(202621-202688)
chr5 (215-246)||(11925995-11926026)
chr5 (635-669)||(28801439-28801473)
chr5 (483-515)||(4307238-4307270)
chr5 (483-515)||(15917017-15917049)
[»] chr7 (22 HSPs)
chr7 (492-669)||(34389056-34389234)
chr7 (484-669)||(37002144-37002330)
chr7 (482-669)||(26624724-26624913)
chr7 (483-669)||(43184468-43184655)
chr7 (491-667)||(8867733-8867910)
chr7 (504-667)||(14777109-14777273)
chr7 (512-669)||(35090177-35090335)
chr7 (503-666)||(5555487-5555651)
chr7 (483-669)||(33685544-33685731)
chr7 (506-666)||(3114099-3114260)
chr7 (483-669)||(7002705-7002892)
chr7 (483-669)||(7048576-7048763)
chr7 (503-669)||(36630816-36630983)
chr7 (503-669)||(8394125-8394292)
chr7 (521-669)||(36658199-36658348)
chr7 (522-669)||(40920003-40920151)
chr7 (526-668)||(38638237-38638380)
chr7 (197-282)||(2654219-2654304)
chr7 (569-628)||(10868514-10868575)
chr7 (491-548)||(10876829-10876886)
chr7 (490-539)||(37966614-37966663)
chr7 (412-484)||(2654433-2654505)
[»] chr3 (24 HSPs)
chr3 (490-669)||(45182968-45183148)
chr3 (482-669)||(6930894-6931082)
chr3 (484-669)||(33040934-33041120)
chr3 (490-669)||(11018212-11018392)
chr3 (486-669)||(27935161-27935345)
chr3 (484-653)||(45335856-45336025)
chr3 (504-669)||(22968444-22968610)
chr3 (482-653)||(19565517-19565689)
chr3 (503-669)||(19390146-19390313)
chr3 (504-668)||(6269427-6269592)
chr3 (490-669)||(6503569-6503749)
chr3 (503-669)||(34084122-34084289)
chr3 (504-669)||(39771791-39771957)
chr3 (516-669)||(40081741-40081893)
chr3 (491-669)||(35514254-35514429)
chr3 (525-628)||(5135291-5135397)
chr3 (482-540)||(6890977-6891035)
chr3 (491-552)||(5354697-5354758)
chr3 (212-278)||(19585303-19585369)
chr3 (503-551)||(22922157-22922205)
chr3 (621-669)||(22922214-22922262)
chr3 (212-278)||(12298022-12298088)
chr3 (635-669)||(5135421-5135455)
chr3 (635-663)||(51262115-51262143)
[»] chr6 (14 HSPs)
chr6 (483-669)||(28996710-28996897)
chr6 (503-669)||(18339106-18339273)
chr6 (504-669)||(398618-398784)
chr6 (482-653)||(29743262-29743434)
chr6 (503-666)||(13837821-13837985)
chr6 (503-666)||(34948761-34948925)
chr6 (519-669)||(33229336-33229487)
chr6 (490-598)||(31028435-31028544)
chr6 (490-587)||(24697899-24697997)
chr6 (483-539)||(13646997-13647053)
chr6 (483-539)||(34385519-34385575)
chr6 (491-540)||(21149331-21149380)
chr6 (490-540)||(2753337-2753387)
chr6 (635-663)||(11971095-11971123)
[»] chr2 (25 HSPs)
chr2 (483-669)||(45418563-45418750)
chr2 (484-669)||(44084603-44084789)
chr2 (483-668)||(8147331-8147518)
chr2 (484-668)||(770975-771165)
chr2 (506-669)||(41251634-41251798)
chr2 (503-658)||(42439986-42440142)
chr2 (504-669)||(6403804-6403970)
chr2 (503-666)||(32127144-32127308)
chr2 (503-666)||(35962715-35962879)
chr2 (521-669)||(12756837-12756986)
chr2 (503-669)||(17445041-17445206)
chr2 (503-669)||(31581622-31581789)
chr2 (490-666)||(8059336-8059513)
chr2 (506-666)||(16405603-16405764)
chr2 (509-666)||(18981622-18981780)
chr2 (503-639)||(2958131-2958267)
chr2 (528-658)||(2285887-2286018)
chr2 (483-616)||(26237937-26238071)
chr2 (483-628)||(4555250-4555397)
chr2 (569-669)||(26162702-26162799)
chr2 (482-533)||(34523219-34523270)
chr2 (512-628)||(7072589-7072710)
chr2 (203-269)||(27034840-27034906)
chr2 (523-581)||(34905969-34906028)
chr2 (635-663)||(31392932-31392960)
[»] chr4 (45 HSPs)
chr4 (480-669)||(3292896-3293086)
chr4 (484-669)||(30216742-30216928)
chr4 (483-669)||(6690235-6690422)
chr4 (483-667)||(50205079-50205264)
chr4 (490-669)||(43143584-43143764)
chr4 (490-669)||(42333776-42333956)
chr4 (491-669)||(48989316-48989495)
chr4 (504-669)||(20129311-20129477)
chr4 (503-669)||(25930708-25930875)
chr4 (504-669)||(13012189-13012355)
chr4 (504-669)||(47500774-47500940)
chr4 (483-651)||(10352902-10353071)
chr4 (483-669)||(28877250-28877437)
chr4 (503-669)||(36382346-36382512)
chr4 (504-669)||(26439279-26439445)
chr4 (504-669)||(34407284-34407450)
chr4 (520-669)||(44156668-44156818)
chr4 (483-653)||(30077647-30077817)
chr4 (504-669)||(43355905-43356071)
chr4 (506-666)||(29319708-29319869)
chr4 (485-656)||(26448035-26448206)
chr4 (490-669)||(29995983-29996163)
chr4 (527-669)||(35545977-35546120)
chr4 (516-666)||(40529028-40529179)
chr4 (513-669)||(17511233-17511391)
chr4 (569-669)||(6235587-6235687)
chr4 (492-628)||(30109945-30110084)
chr4 (483-657)||(13392893-13393057)
chr4 (483-657)||(13396032-13396196)
chr4 (515-628)||(48129978-48130087)
chr4 (538-669)||(1817752-1817884)
chr4 (482-540)||(49908782-49908840)
chr4 (483-540)||(5517494-5517551)
chr4 (490-544)||(7769315-7769369)
chr4 (483-539)||(6212029-6212085)
chr4 (491-602)||(45194164-45194276)
chr4 (485-539)||(17554978-17555032)
chr4 (482-587)||(27363340-27363446)
chr4 (203-269)||(35088800-35088866)
chr4 (490-540)||(50720476-50720526)
chr4 (483-539)||(12680193-12680249)
chr4 (528-595)||(6254569-6254637)
chr4 (635-669)||(30110108-30110142)
chr4 (635-669)||(48130111-48130145)
chr4 (635-663)||(4325547-4325575)
[»] chr8 (16 HSPs)
chr8 (483-669)||(23402088-23402275)
chr8 (490-669)||(16788025-16788205)
chr8 (481-669)||(34136825-34137014)
chr8 (490-669)||(4403995-4404175)
chr8 (503-669)||(29728386-29728553)
chr8 (483-669)||(36408531-36408718)
chr8 (504-669)||(39914516-39914681)
chr8 (503-666)||(15838286-15838449)
chr8 (517-669)||(3648794-3648947)
chr8 (525-669)||(9877242-9877387)
chr8 (484-657)||(2729208-2729382)
chr8 (519-628)||(3435285-3435397)
chr8 (577-669)||(42231012-42231104)
chr8 (487-552)||(10397158-10397223)
chr8 (635-669)||(40470475-40470509)
chr8 (526-595)||(40470567-40470637)
[»] scaffold0502 (1 HSPs)
scaffold0502 (503-669)||(5230-5397)
[»] scaffold0154 (1 HSPs)
scaffold0154 (483-669)||(31460-31647)
[»] chr1 (19 HSPs)
chr1 (490-669)||(35907539-35907719)
chr1 (483-668)||(17445293-17445479)
chr1 (504-669)||(26144256-26144422)
chr1 (503-669)||(32982056-32982223)
chr1 (490-669)||(3828971-3829150)
chr1 (507-666)||(7433449-7433609)
chr1 (503-669)||(42310941-42311108)
chr1 (490-669)||(321377-321557)
chr1 (482-628)||(41972314-41972462)
chr1 (482-628)||(33489666-33489815)
chr1 (484-540)||(31866958-31867014)
chr1 (511-608)||(23313246-23313345)
chr1 (483-539)||(44352614-44352670)
chr1 (212-278)||(52779302-52779368)
chr1 (483-552)||(48901223-48901291)
chr1 (635-669)||(33489839-33489873)
chr1 (635-669)||(41972256-41972290)
chr1 (635-663)||(25017522-25017550)
chr1 (635-663)||(32379867-32379895)
[»] scaffold0002 (1 HSPs)
scaffold0002 (504-669)||(480457-480623)
[»] scaffold2142 (1 HSPs)
scaffold2142 (504-669)||(523-689)
[»] scaffold0041 (1 HSPs)
scaffold0041 (522-669)||(52944-53092)
[»] scaffold0069 (1 HSPs)
scaffold0069 (503-669)||(17842-18009)
[»] scaffold0769 (1 HSPs)
scaffold0769 (485-533)||(1259-1307)
[»] scaffold0012 (1 HSPs)
scaffold0012 (496-533)||(194021-194058)
[»] scaffold0329 (1 HSPs)
scaffold0329 (212-278)||(12631-12697)


Alignment Details
Target: chr5 (Bit Score: 401; Significance: 0; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 401; E-Value: 0
Query Start/End: Original strand, 39 - 484
Target Start/End: Original strand, 26619860 - 26620307
Alignment:
Q  39 cagaaaagcctaaaagatgagtggtagaaga--ccacacccaggagaattcataagatatcttaggactctcagagaatcagtctgatcgggtggaaact 136  Q
    |||| ||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26619860 cagagaagcctaaaagatgagtggtagaagaggccacacccaggagaattcatgagatatcttaggactctcagagaatcagtctgatcgggtggaaact 26619959  T
Q  137 ggtttagagtcaagaaggcctgactcagaaagaagatctaagcaatattttttctaacaaatggagatgccagctttggaatgagctacttcaataccaa 236  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26619960 ggtttagagtcaagaaggcctgactcagaaagaagatctaagcaatattttttctaacaaatggagatgccagctttggaatgagctacttcaataccaa 26620059  T
Q  237 gaaaatatttgagttgacctaaatccttgatttgaaatgaagtgtggagaacactttttatgaaagaaaactcggagagggagtttccagccagaatcaa 336  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||     
T  26620060 gaaaatatttgagttgacctaaatccttgatttgaaatgaagcgtggagaactctttttatgaaagaaaacttggagagggagtttccagccagaatcac 26620159  T
Q  337 atcatcaacataaaccagtaaaagagtgaataatcaaagggtggttttcgtgaataaagaatgatctgatgcagcttgtgtgtattcatgttgaacaagc 436  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  26620160 atcatcaacataaaccagtaaaagagtgaataatcaaagggtggttttcgcgaataaagaatgatttgatgcagcttgtgtgtattcatgttgaacaagc 26620259  T
Q  437 aaagaagttaatctttcatatcattttctactggcttgtttaaggcca 484  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||    
T  26620260 aaagaagttaatctttcatatcattttctacttgcttgtttaaggcca 26620307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 483 - 669
Target Start/End: Complemental strand, 12279047 - 12278860
Alignment:
Q  483 caggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaaccaaaag-ctaattaacagactta 581  Q
    |||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||| | |||||||| |||||    
T  12279047 caggggcggtttcaccgcccggcgatcccgggcggtcgcccggactcgatcgataatttttgcacattagacccaacccaaaggccaattaacacactta 12278948  T
Q  582 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12278947 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacaggttcatctc 12278860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 474 - 669
Target Start/End: Original strand, 31680339 - 31680534
Alignment:
Q  474 gtttaaggccaggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaatta 572  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||| |||||| |||||    
T  31680339 gtttaaggc-aggggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttccgcattagacccaacccaaaagccaatta 31680437  T
Q  573 acagacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  31680438 acacacttacaaaaagaaaaatttgggcaatctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 31680534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 483 - 669
Target Start/End: Complemental strand, 17332738 - 17332551
Alignment:
Q  483 caggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagactta 581  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||| |||||| |||||||| |||||    
T  17332738 caggggcggtttcaccgcccggcgaccccgggcgttcgcccgggctcgatcgataatttttgcatattagacccaacccaaaagccaattaacacactta 17332639  T
Q  582 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| | ||||||||    
T  17332638 caaaaagaaaaatttgggcaatctgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 17332551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 490 - 669
Target Start/End: Original strand, 37254628 - 37254808
Alignment:
Q  490 ggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaag 588  Q
    ||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||| |||||  |||||||| ||||||||||||    
T  37254628 ggtttcaccgctcggcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagacccaacccaaaagtcaattaacacacttacaaaaag 37254727  T
Q  589 aaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||    
T  37254728 aaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgggttcatctc 37254808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 483 - 657
Target Start/End: Complemental strand, 31501903 - 31501728
Alignment:
Q  483 caggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagactta 581  Q
    |||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||| |||||| |||||||| |||||    
T  31501903 caggggcggtttcaccgcccggcgaccccgggcgattgcccgggctcgatcgataatttttgcacattagacccaacccaaaagccaattaacacactta 31501804  T
Q  582 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattga 657  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||    
T  31501803 caaaaagaaaaatttgggcaatctgaaaattctcgcacgcaaataggtctcgaaattttatttagcacactattga 31501728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 517 - 669
Target Start/End: Original strand, 33430335 - 33430488
Alignment:
Q  517 gtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggcaatctgaaaattctc 615  Q
    ||||||||||||||||||||||||||||| ||||||||| |||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  33430335 gtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctc 33430434  T
Q  616 acacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  33430435 acacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 33430488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 503 - 666
Target Start/End: Original strand, 10033927 - 10034091
Alignment:
Q  503 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggca 601  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||  |||| ||||||  ||||||| | |||||||||||||||||||||||    
T  10033927 ggcgaccccggacgatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 10034026  T
Q  602 atctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcat 666  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  10034027 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 10034091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 503 - 669
Target Start/End: Original strand, 13817977 - 13818144
Alignment:
Q  503 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggca 601  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||| ||||||  ||||||| | |||||||||||||||||||||||    
T  13817977 ggcgaccccgggcggtcgctcgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 13818076  T
Q  602 atctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| || |||||||    
T  13818077 atctgaaaattgtcacacgcaaataggtcttggaaatttatttagcacactattgacgggctcatctc 13818144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 504 - 669
Target Start/End: Complemental strand, 26283484 - 26283318
Alignment:
Q  504 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaaccaaaa-gctaattaacagacttacaaaaagaaaaatttgggcaa 602  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||| | | ||||||| | ||| ||||||||||||||||||||    
T  26283484 gcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacatttataaaaagaaaaatttgggcaa 26283385  T
Q  603 tctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    |||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  26283384 tctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 26283318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 503 - 666
Target Start/End: Complemental strand, 39657673 - 39657509
Alignment:
Q  503 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggca 601  Q
    ||||||||| | ||||||  |||||||||| |||||||||||||||||||||  |||| ||||||| ||||||| | |||||||||||||||||||||||    
T  39657673 ggcgaccccagacggtcgttcgggctcgattgataatttttgcacattagactcaacccaaaagctcattaacacatttacaaaaagaaaaatttgggca 39657574  T
Q  602 atctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcat 666  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  39657573 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 39657509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 505 - 668
Target Start/End: Complemental strand, 1776541 - 1776377
Alignment:
Q  505 cgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaaccaaaagcta-attaacagacttacaaaaagaaaaatttgggcaat 603  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |   ||||||||  |  ||||||| | |||||||||||||||||||||||||    
T  1776541 cgaccccgggcggtcgcccgggctcgatcgataatttttgtacattaaagtcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggcaat 1776442  T
Q  604 ctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatct 668  Q
     |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  1776441 ttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactatcgacaggttcatct 1776377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 482 - 669
Target Start/End: Original strand, 36291350 - 36291538
Alignment:
Q  482 ccaggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagactt 580  Q
    ||||||| |||||||||||||| |||| ||||||||||| ||||| |||||| ||||||||||||||||||| |||||| ||||| | ||||||| | ||    
T  36291350 ccaggggcggtttcaccgcccgccgactccgggcggtcgtccgggttcgatcaataatttttgcacattagatctaacctaaaagttcattaacacattt 36291449  T
Q  581 acaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||||||||||||||||| |||||| | |||| |||||||||||  |||||||||||| |||||||||||| ||||||||||    
T  36291450 acaaaaagaaaaatttgggcaatctcaaaattattacacacaaataggtctcagaattttatttaacacactattgacgggttcatctc 36291538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 503 - 669
Target Start/End: Complemental strand, 36293788 - 36293621
Alignment:
Q  503 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggca 601  Q
    |||||||||| ||||||| |||| |||||||||||||||||| |||||||||  |||| ||||||  ||||||| | |||||||||||||||||||||||    
T  36293788 ggcgaccccgagcggtcgtccggactcgatcgataatttttgtacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 36293689  T
Q  602 atctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||    
T  36293688 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactatttacagtttcatctc 36293621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 503 - 669
Target Start/End: Original strand, 39434696 - 39434863
Alignment:
Q  503 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggca 601  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||  |||| ||||||  ||||||| | |||||||| ||||||||||||||    
T  39434696 ggcgaccctgggcggtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacatttacaaaatgaaaaatttgggca 39434795  T
Q  602 atctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||| ||||| | ||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  39434796 atctgaaaattgtcacatgtaaataggtctttgaattttatttagcacactattgacagtttcatctc 39434863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 521 - 669
Target Start/End: Original strand, 16155015 - 16155164
Alignment:
Q  521 cccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggcaatctgaaaattctcacac 619  Q
    ||||||||||||||||||||||||||||||||||  |||| ||||||  ||||||| | ||| |||||||||||||| ||||||||||||||| ||||||    
T  16155015 cccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttaggcaatctgaaaattgtcacac 16155114  T
Q  620 gcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16155115 gcaaataggtcttggaattttatttagcacactattgacagattcatctc 16155164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 505 - 669
Target Start/End: Original strand, 19985941 - 19986106
Alignment:
Q  505 cgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggcaat 603  Q
    ||||| |||||||||| ||| ||||||||||||||||||||||||||||   |||| |||||   |||| || | ||||||||||||||||||||| |||    
T  19985941 cgacctcgggcggtcgtccgagctcgatcgataatttttgcacattagattcaacccaaaagtccattagcacatttacaaaaagaaaaatttgggtaat 19986040  T
Q  604 ctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    || |||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  19986041 ctaaaaattatcacacgcaaataggtcttgaaattttatttaacacactattgacaggttcatctc 19986106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 533 - 658
Target Start/End: Complemental strand, 16334013 - 16333887
Alignment:
Q  533 cgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtct 631  Q
    |||||||||||||||||||||   |||| ||||||  ||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16334013 cgataatttttgcacattagattcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtct 16333914  T
Q  632 tggaattttatttagcacactattgac 658  Q
    |||||||||||||||||||||||||||    
T  16333913 tggaattttatttagcacactattgac 16333887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 503 - 653
Target Start/End: Complemental strand, 3155798 - 3155647
Alignment:
Q  503 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggca 601  Q
    ||||| ||||||||||||| ||||||||||| |||||||||||||||| |||  |||| |||||   ||||||| | ||| |||||||||||||||| ||    
T  3155798 ggcgatcccgggcggtcgctcgggctcgatcaataatttttgcacattcgactcaacctaaaagtccattaacacatttataaaaagaaaaatttggaca 3155699  T
Q  602 atctgaaaattctcacacgcaaataggtcttggaattttatttagcacacta 653  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  3155698 atctgaaaattgtcacacgcaaatagatcttggaattttatttagcacacta 3155647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 522 - 669
Target Start/End: Original strand, 43068896 - 43069044
Alignment:
Q  522 ccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggcaatctgaaaattctcacacg 620  Q
    |||||||||||| ||||||||| ||||||||||| |||| |||||   ||||||| | |||||||||||||||||||||||||||||||||||| ||| |    
T  43068896 ccgggctcgatcaataattttttcacattagacccaacccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattcttacatg 43068995  T
Q  621 caaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
     ||||| |||| |||||||||||||||||||||||| | | ||||||||    
T  43068996 taaataagtctcggaattttatttagcacactattgccggattcatctc 43069044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 516 - 628
Target Start/End: Original strand, 28801300 - 28801415
Alignment:
Q  516 ggtcgcccgggctcgatcgataatttttgcacattaga-cctaaccaaaagctaattaacagacttacaaaaagaaaaatttggg--caatctgaaaatt 612  Q
    |||||||| ||||||||||||||||||||||||||||| || ||||||||||  ||||||| |||||||||||||||||||||||   ||| ||||||||    
T  28801300 ggtcgccctggctcgatcgataatttttgcacattagatccaaaccaaaagcccattaacacacttacaaaaagaaaaatttgggaaaaatatgaaaatt 28801399  T
Q  613 ctcacacgcaaatagg 628  Q
    ||||||||||||||||    
T  28801400 ctcacacgcaaatagg 28801415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 483 - 533
Target Start/End: Complemental strand, 26543952 - 26543902
Alignment:
Q  483 caggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatc 533  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  26543952 caggggcggttttaccgcccggcgaccccgggcggtcgcccgggctcgatc 26543902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 485 - 552
Target Start/End: Original strand, 202621 - 202688
Alignment:
Q  485 ggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattag 552  Q
    |||| |||||||||||||| ||||||  || |||||||||||||||||||||||||| || |||||||    
T  202621 ggggcggtttcaccgcccgacgaccctaggtggtcgcccgggctcgatcgataatttgtgtacattag 202688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 246
Target Start/End: Complemental strand, 11926026 - 11925995
Alignment:
Q  215 gaatgagctacttcaataccaagaaaatattt 246  Q
    ||||||||||||||||||||||||||||||||    
T  11926026 gaatgagctacttcaataccaagaaaatattt 11925995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 635 - 669
Target Start/End: Original strand, 28801439 - 28801473
Alignment:
Q  635 aattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||||| |||||||||||||||||||||    
T  28801439 aattttatttagctcactattgacaggttcatctc 28801473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 483 - 515
Target Start/End: Complemental strand, 4307270 - 4307238
Alignment:
Q  483 caggggtggtttcaccgcccggcgaccccgggc 515  Q
    |||||| ||||||||||||||||||||||||||    
T  4307270 caggggcggtttcaccgcccggcgaccccgggc 4307238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 483 - 515
Target Start/End: Original strand, 15917017 - 15917049
Alignment:
Q  483 caggggtggtttcaccgcccggcgaccccgggc 515  Q
    |||||| ||||||||||||||||||||||||||    
T  15917017 caggggcggtttcaccgcccggcgaccccgggc 15917049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 147; Significance: 4e-77; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 492 - 669
Target Start/End: Complemental strand, 34389234 - 34389056
Alignment:
Q  492 tttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaa 590  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  34389234 tttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttacaaaaagaa 34389135  T
Q  591 aaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||| ||||||||||    
T  34389134 aaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattatcgacgggttcatctc 34389056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 484 - 669
Target Start/End: Complemental strand, 37002330 - 37002144
Alignment:
Q  484 aggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaa-ccaaaagctaattaacagacttac 582  Q
    ||||| |||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||| || |||||||  |||||||| ||||||    
T  37002330 aggggcggtttcaccgcccggcgaccccgggcggtcgttcggtctcgatcgataatttttgcacattagacccaatccaaaagtcaattaacacacttac 37002231  T
Q  583 aaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37002230 aaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 37002144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 482 - 669
Target Start/End: Original strand, 26624724 - 26624913
Alignment:
Q  482 ccaggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgat-cgataatttttgcacattagacctaa-ccaaaagctaattaacagact 579  Q
    ||||||| |||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||| |||||||| || ||||||| ||||||||| |||    
T  26624724 ccaggggcggtttcaccgcccggcaaccccgggcggtcgcctgggctcgattcgataatttttgcatattagacccaatccaaaagttaattaacacact 26624823  T
Q  580 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  26624824 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 26624913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 483 - 669
Target Start/End: Complemental strand, 43184655 - 43184468
Alignment:
Q  483 caggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagactta 581  Q
    |||||| ||||||||||||||||||  |||||||||||| ||||||||||||||||||||| | ||| |||| ||||| |||||| |||||||| |||||    
T  43184655 caggggcggtttcaccgcccggcgattccgggcggtcgctcgggctcgatcgataatttttacgcatcagacttaacccaaaagccaattaacatactta 43184556  T
Q  582 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||    
T  43184555 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctctgaattttatttagcacactattgacgggttcatctc 43184468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 491 - 667
Target Start/End: Complemental strand, 8867910 - 8867733
Alignment:
Q  491 gtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaa-ccaaaagctaattaacagacttacaaaaaga 589  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||| |||||| | | |||||||||||    
T  8867910 gtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcatattagacccaatccaaaagccaattaatacatttacaaaaaga 8867811  T
Q  590 aaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatc 667  Q
    ||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||| | ||||||    
T  8867810 aaaatttgggcaatcggaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacggattcatc 8867733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 504 - 667
Target Start/End: Complemental strand, 14777273 - 14777109
Alignment:
Q  504 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggcaa 602  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||| ||||||| | ||||||||||||||||||||||||    
T  14777273 gcgatcccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagctcattaacacatttacaaaaagaaaaatttgggcaa 14777174  T
Q  603 tctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatc 667  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  14777173 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatc 14777109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 512 - 669
Target Start/End: Original strand, 35090177 - 35090335
Alignment:
Q  512 gggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggcaatctgaaaa 610  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||| |||||| |||||||| ||||||||||||||||||||||| ||||||||||    
T  35090177 gggcggtcgcccgggctcgatcaataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggtaatctgaaaa 35090276  T
Q  611 ttctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||    
T  35090277 ttctcacacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 35090335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 503 - 666
Target Start/End: Original strand, 5555487 - 5555651
Alignment:
Q  503 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggca 601  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||  ||||||  | |||||||||||||||||||||||    
T  5555487 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacgcatttacaaaaagaaaaatttgggca 5555586  T
Q  602 atctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcat 666  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  5555587 atctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcat 5555651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 483 - 669
Target Start/End: Original strand, 33685544 - 33685731
Alignment:
Q  483 caggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagactta 581  Q
    |||||| |||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||| ||| |||| ||||||  ||||||| |||||    
T  33685544 caggggcggtttcaccgcccggcgaccccaggcagtcgctcgggctcgatcgataatttttgcacattaaacccaacccaaaagcccattaacacactta 33685643  T
Q  582 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||   |||||||||||||||||||||||| |||| |||||    
T  33685644 caaaaagaaaaatttgggcaatctgaaaattctcatacgcaaatatgtctcataattttatttagcacactattgacgggtttatctc 33685731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 506 - 666
Target Start/End: Complemental strand, 3114260 - 3114099
Alignment:
Q  506 gaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggcaatc 604  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||  |||| ||||||  ||||||| | ||||||||||||||||||||||||||    
T  3114260 gaccccggacggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatc 3114161  T
Q  605 tgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcat 666  Q
    |||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  3114160 tgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcat 3114099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 483 - 669
Target Start/End: Original strand, 7002705 - 7002892
Alignment:
Q  483 caggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagactta 581  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||  ||||||  |||||| ||| |||| |||||| |||||||| || ||    
T  7002705 caggggcggtttcaccgcccggcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacata 7002804  T
Q  582 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    |||||| |||||||||| |||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||    
T  7002805 caaaaataaaaatttggacaatctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgacgggttcatctc 7002892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 483 - 669
Target Start/End: Original strand, 7048576 - 7048763
Alignment:
Q  483 caggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagactta 581  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||  ||||||  |||||| ||| |||| |||||| |||||||| || ||    
T  7048576 caggggcggtttcaccgcccggcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacata 7048675  T
Q  582 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    |||||| |||||||||| |||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||    
T  7048676 caaaaataaaaatttggacaatctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgacgggttcatctc 7048763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 503 - 669
Target Start/End: Original strand, 36630816 - 36630983
Alignment:
Q  503 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaaccaaaagcta-attaacagacttacaaaaagaaaaatttgggca 601  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||  ||||||||  |  ||||||| | |||||||||||||||||||||||    
T  36630816 ggcgaccccggacggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggca 36630915  T
Q  602 atctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  36630916 atctgaaaattgtcacacgcaaataggtcttggaattttagttagcacactattgacgggttcatctc 36630983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 503 - 669
Target Start/End: Original strand, 8394125 - 8394292
Alignment:
Q  503 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaaccaaaagcta-attaacagacttacaaaaagaaaaatttgggca 601  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||  |  ||||||| | |||||||| ||||||||||||||    
T  8394125 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaaggaaaaatttgggca 8394224  T
Q  602 atctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||    
T  8394225 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacgggtttatctc 8394292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 521 - 669
Target Start/End: Original strand, 36658199 - 36658348
Alignment:
Q  521 cccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggcaatctgaaaattctcacac 619  Q
    ||||| |||||||||||||||||||||||| |||| |||| |||||| |||||||| ||| ||||||| |||||||||||||||||||||||||||||||    
T  36658199 cccggactcgatcgataatttttgcacattggacccaaccgaaaagccaattaacatactaacaaaaataaaaatttgggcaatctgaaaattctcacac 36658298  T
Q  620 gcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  36658299 gcaaataggtctcggaattttatttagcacactattgacgggttcatctc 36658348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 522 - 669
Target Start/End: Complemental strand, 40920151 - 40920003
Alignment:
Q  522 ccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggcaatctgaaaattctcacacg 620  Q
    ||||||||||||||||||||||||||||||||  ||||| |||||| |||||||| | |||||||||||||||||||| ||||||||||||||||||| |    
T  40920151 ccgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcacatg 40920052  T
Q  621 caaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  40920051 caaataggtctcggaattttatttagcacactattgacgggttcatctc 40920003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 526 - 668
Target Start/End: Complemental strand, 38638380 - 38638237
Alignment:
Q  526 gctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaa 624  Q
    ||||||| |||||||||||||||||||| | |||| |||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38638380 gctcgattgataatttttgcacattagatccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaa 38638281  T
Q  625 taggtcttggaattttatttagcacactattgacaggttcatct 668  Q
    ||||||| |||||||||||||||||||||||||| |||||||||    
T  38638280 taggtctcggaattttatttagcacactattgacgggttcatct 38638237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 197 - 282
Target Start/End: Original strand, 2654219 - 2654304
Alignment:
Q  197 atggagatgccagctttggaatgagctacttcaataccaagaaaatatttgagttgacctaaatccttgatttgaaatgaagtgtg 282  Q
    |||||||||||| ||||||| || ||||| |  | |||||||||||| |||||| | |||||||||||||||||||| ||||||||    
T  2654219 atggagatgccaactttggagtgtgctacctatagaccaagaaaataattgagtaggcctaaatccttgatttgaaaagaagtgtg 2654304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 569 - 628
Target Start/End: Complemental strand, 10868575 - 10868514
Alignment:
Q  569 attaacagacttacaaaaagaaaaatttgggc--aatctgaaaattctcacacgcaaatagg 628  Q
    ||||||| | ||||||||||||||||||||||  ||||||||||||||||| ||||||||||    
T  10868575 attaacacatttacaaaaagaaaaatttgggcaaaatctgaaaattctcacgcgcaaatagg 10868514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 491 - 548
Target Start/End: Complemental strand, 10876886 - 10876829
Alignment:
Q  491 gtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcaca 548  Q
    |||||||  |||||||| |||| | |||||||||||||||||||||||||||||||||    
T  10876886 gtttcacttcccggcgaacccgtgtggtcgcccgggctcgatcgataatttttgcaca 10876829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 490 - 539
Target Start/End: Complemental strand, 37966663 - 37966614
Alignment:
Q  490 ggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataat 539  Q
    |||||||||||||||||||| | |||||||| ||| ||||||||||||||    
T  37966663 ggtttcaccgcccggcgacctcaggcggtcgtccgagctcgatcgataat 37966614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 412 - 484
Target Start/End: Original strand, 2654433 - 2654505
Alignment:
Q  412 ttgtgtgtattcatgttgaacaagcaaagaagttaatctttcatatcattttctactggcttgtttaaggcca 484  Q
    ||||| |||| |||| |||| ||| |||||||||||||||||||  ||||||||||   ||||||| ||||||    
T  2654433 ttgtgcgtatccatgatgaataagtaaagaagttaatctttcatgccattttctaccaacttgtttgaggcca 2654505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 145; Significance: 6e-76; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 490 - 669
Target Start/End: Original strand, 45182968 - 45183148
Alignment:
Q  490 ggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaag 588  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||| |||||||| ||||||||||||    
T  45182968 ggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaag 45183067  T
Q  589 aaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  45183068 aaaaatttgggcaatctgaaaattctcacacacaaataggtctcggaattttatttagcacactattgacgggttcatctc 45183148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 482 - 669
Target Start/End: Complemental strand, 6931082 - 6930894
Alignment:
Q  482 ccaggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagactt 580  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| | |||| |||||| |||||||| | ||    
T  6931082 ccaggggcggtttcaccgcccggcgaccccggacggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacattt 6930983  T
Q  581 acaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||    
T  6930982 acaaaaagaaaaatttaggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 6930894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 484 - 669
Target Start/End: Original strand, 33040934 - 33041120
Alignment:
Q  484 aggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttac 582  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||| |||| ||||||||||||||| ||||||    
T  33040934 aggggcggtttcaccgcccggcgaccccgggcggtcgctcgggctcgattgataatttttgcatattagacccaacccaaaagctaattaacacacttac 33041033  T
Q  583 aaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    |||||||||||||||  |||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  33041034 aaaaagaaaaatttgaacaatttgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 33041120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 490 - 669
Target Start/End: Complemental strand, 11018392 - 11018212
Alignment:
Q  490 ggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaag 588  Q
    |||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||  |||| |||||| |||||||| ||||||||||||    
T  11018392 ggtttcaccgtccggcgactccgggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaag 11018293  T
Q  589 aaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||| ||||||||||    
T  11018292 aaaaatttgggcaatctgaaaattctcacacgcaaataggtctcagaattttatttagcacacaattgacgggttcatctc 11018212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 486 - 669
Target Start/End: Original strand, 27935161 - 27935345
Alignment:
Q  486 gggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaa 584  Q
    |||||||||||||||| ||| |||| |||| ||||||||||||||||||||||||||||||||||| ||| |||| ||||||| ||||||| ||||||||    
T  27935161 gggtggtttcaccgcctggcaaccctgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaacccaaaagctcattaacacacttacaa 27935260  T
Q  585 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||| ||||||||| ||||||||||    
T  27935261 aaagaaaaatttgggcaatctgaaaattctcatacgaaaataggtctcggaattttatttagcatactattgacgggttcatctc 27935345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 484 - 653
Target Start/End: Original strand, 45335856 - 45336025
Alignment:
Q  484 aggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaaccaaaagctaattaacagacttaca 583  Q
    ||||| |||||||||||||||||||| ||||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||  | ||||||| | |||||    
T  45335856 aggggcggtttcaccgcccggcgacctcgggcggtcgcccggactcaatcgataatttttacacattagacccaaccaaaaagtcattaacacatttaca 45335955  T
Q  584 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacacta 653  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  45335956 aaaagaaaaatctgggcaatctgaaaattcttacacgcaaataggtcttggaattttatttagcacacta 45336025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 504 - 669
Target Start/End: Complemental strand, 22968610 - 22968444
Alignment:
Q  504 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggcaa 602  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||  ||||||| | ||||||||||||||||||||||||    
T  22968610 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagacttaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 22968511  T
Q  603 tctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||| |||||| ||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||    
T  22968510 tctaaaaattgtcacacgtaaataggtcttgaaattttatttagcacactattgacagtttcatctc 22968444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 482 - 653
Target Start/End: Complemental strand, 19565689 - 19565517
Alignment:
Q  482 ccaggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaaccaaaagcta-attaacagactt 580  Q
    ||||||| |||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||| ||||||||  |  ||||||| | ||    
T  19565689 ccaggggcggtttcaccgcccggcgatcccgggcggtcgcccgggttcaatcgataatttttgcacattagacccaaccaaaaaatccattaacacattt 19565590  T
Q  581 acaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacacta 653  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  19565589 acaaaaagaaaaatttggacaatctgaaaattcttacacgcaaataggtctcggaattttatttagcacacta 19565517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 503 - 669
Target Start/End: Original strand, 19390146 - 19390313
Alignment:
Q  503 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggca 601  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||  |||| |||||   ||||||| | |||||||||||||||||||||||    
T  19390146 ggcgaccccgggcggtcgtccgggttcgatcgataatttttgcacattagactcaacctaaaagtctattaacacatttacaaaaagaaaaatttgggca 19390245  T
Q  602 atctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  19390246 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctc 19390313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 504 - 668
Target Start/End: Complemental strand, 6269592 - 6269427
Alignment:
Q  504 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggcaa 602  Q
    |||| |||||||||||| |||| ||||||||||||||||||||||||||||  |||| ||||||  ||||||| | ||||||||||||||||||||||||    
T  6269592 gcgatcccgggcggtcgtccggactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 6269493  T
Q  603 tctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatct 668  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  6269492 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatct 6269427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 490 - 669
Target Start/End: Complemental strand, 6503749 - 6503569
Alignment:
Q  490 ggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaag 588  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||  |||| |||||| ||||| || ||||||||||||    
T  6503749 ggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgattatttttgcaaattagactcaacccaaaagccaattagcacacttacaaaaag 6503650  T
Q  589 aaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||  |||||||||||||||||||| |||||||||||| ||| ||||||||||||||| |||||  ||||||||||    
T  6503649 aaaaatttaagcaatctgaaaattctcacaggcaaataggtctcggatttttatttagcacacaattgatgggttcatctc 6503569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 503 - 669
Target Start/End: Complemental strand, 34084289 - 34084122
Alignment:
Q  503 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaaccaaaagcta-attaacagacttacaaaaagaaaaatttgggca 601  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |   ||||||||  |  ||||||| | |||||||||||||||||||||||    
T  34084289 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattaaattcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggca 34084190  T
Q  602 atctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    || |||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  34084189 atatgaaaattatcacacgcaaataggtcttggaattttatttagcacactattgatgggttcatctc 34084122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 504 - 669
Target Start/End: Original strand, 39771791 - 39771957
Alignment:
Q  504 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggcaa 602  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||  |||| ||||||  ||||||| | ||| ||||||||||||||||||||    
T  39771791 gcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttgggcaa 39771890  T
Q  603 tctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    |||||||||| ||||||| |||||||||||| ||||||||||  |||||||||||||| ||||||||    
T  39771891 tctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctc 39771957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 516 - 669
Target Start/End: Complemental strand, 40081893 - 40081741
Alignment:
Q  516 ggtcgcccgggctcgatcgataatttttgcacattagacctaaccaaaagctaattaacagacttacaaaaagaaaaatttgggcaatctgaaaattctc 615  Q
    ||||||||||||||||||||||||||||| |||||||||  ||||||||||| ||||||| | ||||||||||||||||||||||||| |||||||| ||    
T  40081893 ggtcgcccgggctcgatcgataatttttgaacattagactcaaccaaaagctcattaacacatttacaaaaagaaaaatttgggcaatttgaaaattgtc 40081794  T
Q  616 acacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    |||||||||||| |||||| ||||| ||||||||||||||||| ||||||||||    
T  40081793 acacgcaaatagatcttgg-attttttttagcacactattgacgggttcatctc 40081741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 491 - 669
Target Start/End: Original strand, 35514254 - 35514429
Alignment:
Q  491 gtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaaga 589  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||| | |||| | |||| |||||   ||||||| ||    |||||||    
T  35514254 gtttcaccgcccggcgaccccggacggtcgtccgggctcgatcgataattttcgcatactagatccaacccaaaagtccattaacacac----aaaaaga 35514349  T
Q  590 aaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||| |||| ||||||||||||| ||||||||||||| |||||||||||| ||||||||||||| ||||||||||    
T  35514350 aaaatttggacaatatgaaaattctcactcgcaaataggtctaggaattttattttgcacactattgacgggttcatctc 35514429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 525 - 628
Target Start/End: Original strand, 5135291 - 5135397
Alignment:
Q  525 ggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggc--aatctgaaaattctcacacgc 621  Q
    |||||||||||| ||||||| |||||||||| |||| ||||||| ||||||| |||||||||||||||||||||| |  |||| |||||||||||||| |    
T  5135291 ggctcgatcgattatttttgtacattagacccaacctaaaagctcattaacacacttacaaaaagaaaaatttggacaaaatccgaaaattctcacacac 5135390  T
Q  622 aaatagg 628  Q
    |||||||    
T  5135391 aaatagg 5135397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 482 - 540
Target Start/End: Original strand, 6890977 - 6891035
Alignment:
Q  482 ccaggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatt 540  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6890977 ccaggggcggtttcaccgcccggcgacaccgggcggtcgcccgggctcgatcgataatt 6891035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 491 - 552
Target Start/End: Original strand, 5354697 - 5354758
Alignment:
Q  491 gtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattag 552  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||  ||||||||    
T  5354697 gtttcaccgcccggcgaccccgggcggtcgcccgggctcgatccttaattttctcacattag 5354758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 212 - 278
Target Start/End: Original strand, 19585303 - 19585369
Alignment:
Q  212 ttggaatgagctacttcaataccaagaaaatatttgagttgacctaaatccttgatttgaaatgaag 278  Q
    ||||| ||||| ||||||||||||||||||||||| || |||||||| || ||||||| ||||||||    
T  19585303 ttggagtgagcaacttcaataccaagaaaatatttaagctgacctaagtctttgattttaaatgaag 19585369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 503 - 551
Target Start/End: Original strand, 22922157 - 22922205
Alignment:
Q  503 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacatta 551  Q
    ||||| ||||||||||||| |||||||||||||| ||||||||||||||    
T  22922157 ggcgatcccgggcggtcgctcgggctcgatcgatcatttttgcacatta 22922205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 621 - 669
Target Start/End: Original strand, 22922214 - 22922262
Alignment:
Q  621 caaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||| ||||||||||||||||| |||||||||||| ||||||||||    
T  22922214 caaatagatcttggaattttatttaacacactattgacgggttcatctc 22922262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 212 - 278
Target Start/End: Complemental strand, 12298088 - 12298022
Alignment:
Q  212 ttggaatgagctacttcaataccaagaaaatatttgagttgacctaaatccttgatttgaaatgaag 278  Q
    ||||| ||||| ||||||||||||||||||||||| || || ||||| || ||||||| ||||||||    
T  12298088 ttggagtgagcaacttcaataccaagaaaatatttaagctggcctaagtctttgattttaaatgaag 12298022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 635 - 669
Target Start/End: Original strand, 5135421 - 5135455
Alignment:
Q  635 aattttatttagcacactattgacaggttcatctc 669  Q
    |||||||||||||||||||||||| ||||||||||    
T  5135421 aattttatttagcacactattgacgggttcatctc 5135455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 635 - 663
Target Start/End: Original strand, 51262115 - 51262143
Alignment:
Q  635 aattttatttagcacactattgacaggtt 663  Q
    |||||||||||||||||||||||||||||    
T  51262115 aattttatttagcacactattgacaggtt 51262143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 144; Significance: 2e-75; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 483 - 669
Target Start/End: Original strand, 28996710 - 28996897
Alignment:
Q  483 caggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagactta 581  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||| |||||  |||||||| |||||    
T  28996710 caggggcggtttcaccgcccggcgaccccgggcggtcgcccgagctcgatcgataatttttgcgcattagacccaacctaaaagtcaattaacacactta 28996809  T
Q  582 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  28996810 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 28996897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 503 - 669
Target Start/End: Original strand, 18339106 - 18339273
Alignment:
Q  503 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggca 601  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| || | |||||| |||||||| |||||||||||||||| ||||||||    
T  18339106 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggca 18339205  T
Q  602 atctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  18339206 atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 18339273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 504 - 669
Target Start/End: Original strand, 398618 - 398784
Alignment:
Q  504 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaaccaaaa-gctaattaacagacttacaaaaagaaaaatttgggcaa 602  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||| ||||||| | ||| ||||||||||||||||||||    
T  398618 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaa 398717  T
Q  603 tctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    | |||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  398718 tttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 398784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 482 - 653
Target Start/End: Original strand, 29743262 - 29743434
Alignment:
Q  482 ccaggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaaccaaaa-gctaattaacagactt 580  Q
    ||||||| |||||||||| ||| ||| |||||||||| |||||||||| ||||||||||||||||||||||||| |||||||| | | ||||||| | ||    
T  29743262 ccaggggcggtttcaccgtccgacgatcccgggcggttgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagttcattaacacattt 29743361  T
Q  581 acaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacacta 653  Q
    ||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  29743362 acagaaagaaaaatttgggcaatctgaaaattcttacacgcaaataggtctcggaattttatttagcacacta 29743434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 503 - 666
Target Start/End: Original strand, 13837821 - 13837985
Alignment:
Q  503 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggca 601  Q
    |||||||||||||| |||| |||| ||||||||||||||||| |||||||||  |||| ||||||  || |||| | |||||||||||||||||||||||    
T  13837821 ggcgaccccgggcgatcgctcgggttcgatcgataatttttgtacattagactcaacccaaaagcacatcaacacatttacaaaaagaaaaatttgggca 13837920  T
Q  602 atctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcat 666  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  13837921 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 13837985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 503 - 666
Target Start/End: Complemental strand, 34948925 - 34948761
Alignment:
Q  503 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggca 601  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||  |||| ||||||  ||||||| | |||||||||||||||||||||||    
T  34948925 ggcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 34948826  T
Q  602 atctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcat 666  Q
    ||||||||||| |||||| ||||||| ||||| |||||||||||||||||||||||| |||||||    
T  34948825 atctgaaaattgtcacacacaaatagatcttgaaattttatttagcacactattgacgggttcat 34948761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 519 - 669
Target Start/End: Complemental strand, 33229487 - 33229336
Alignment:
Q  519 cgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggcaatctgaaaattctcac 617  Q
    |||||||||||||||||| ||||||| |||||||||| |||| |||||   ||||||| | || ||||||||||||||||||||||||||||||||| ||    
T  33229487 cgcccgggctcgatcgatcatttttgtacattagacccaacccaaaagtccattaacacatttccaaaaagaaaaatttgggcaatctgaaaattcttac 33229388  T
Q  618 acgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||| ||||| |||| || ||||||||||||||||||||| | | ||||||||    
T  33229387 acgtaaataagtctcgggattttatttagcacactattgccggattcatctc 33229336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 490 - 598
Target Start/End: Complemental strand, 31028544 - 31028435
Alignment:
Q  490 ggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaag 588  Q
    ||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||| | |||| ||||||| ||||||| | ||||||||||    
T  31028544 ggtttcaccgcccggcgaccccgagcggttgcccggactcgatcgataatttttgcacattagatccaacctaaaagctcattaacacatttacaaaaag 31028445  T
Q  589 aaaaatttgg 598  Q
     ||| |||||    
T  31028444 gaaattttgg 31028435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 490 - 587
Target Start/End: Complemental strand, 24697997 - 24697899
Alignment:
Q  490 ggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaa-ccaaaagctaattaacagacttacaaaaa 587  Q
    |||||||||||||||||||||||| |  |||||||||||| ||||||||||||| |||||||| || || ||||||||  ||||||| |||||||||||    
T  24697997 ggtttcaccgcccggcgaccccggacactcgcccgggctcaatcgataattttttcacattaggcccaacccaaaagcccattaacacacttacaaaaa 24697899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 483 - 539
Target Start/End: Original strand, 13646997 - 13647053
Alignment:
Q  483 caggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataat 539  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13646997 caggggcggtttcaccacccggcgaccccgggcggtcgcccgggctcgatcgataat 13647053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 483 - 539
Target Start/End: Complemental strand, 34385575 - 34385519
Alignment:
Q  483 caggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataat 539  Q
    |||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  34385575 caggggcggtttcaccgcccggcgaccccgggcggttgccctggctcgatcgataat 34385519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 491 - 540
Target Start/End: Complemental strand, 21149380 - 21149331
Alignment:
Q  491 gtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatt 540  Q
    |||||||||||||| |||| ||||||||||| |||||| |||||||||||    
T  21149380 gtttcaccgcccggtgacctcgggcggtcgctcgggcttgatcgataatt 21149331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 490 - 540
Target Start/End: Original strand, 2753337 - 2753387
Alignment:
Q  490 ggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatt 540  Q
    |||||||||| ||||||||||  |||||||||||| |||| ||||||||||    
T  2753337 ggtttcaccgtccggcgaccctaggcggtcgcccgagctcaatcgataatt 2753387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 635 - 663
Target Start/End: Original strand, 11971095 - 11971123
Alignment:
Q  635 aattttatttagcacactattgacaggtt 663  Q
    |||||||||||||||||||||||||||||    
T  11971095 aattttatttagcacactattgacaggtt 11971123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 144; Significance: 2e-75; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 483 - 669
Target Start/End: Original strand, 45418563 - 45418750
Alignment:
Q  483 caggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagactta 581  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||| |||||| |||||||| |||||    
T  45418563 caggggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacactta 45418662  T
Q  582 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||    
T  45418663 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctctgaattttatttagcacactattgacgggttcatctc 45418750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 484 - 669
Target Start/End: Complemental strand, 44084789 - 44084603
Alignment:
Q  484 aggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaa-ccaaaagctaattaacagacttac 582  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| || ||||||| | ||||||| ||||||    
T  44084789 aggggcggtttcaccgcccggcgaccccgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaatccaaaagttcattaacacacttac 44084690  T
Q  583 aaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||| ||||||||||    
T  44084689 aaaaagaaaaatttgggcaatctgaaaattctcatacgcaaataggtctcagaattttatttagcacactattgacgggttcatctc 44084603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 483 - 668
Target Start/End: Original strand, 8147331 - 8147518
Alignment:
Q  483 caggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaac-caaaagctaattaacagactta 581  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||  |||||||| |||||    
T  8147331 caggggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatctttgcacattagacccaactcaaaagtcaattaacacactta 8147430  T
Q  582 caaaaagaaaaatttgggcaatctg-aaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatct 668  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||| |||||||||||| |||||||||    
T  8147431 caaaaagaaaaatttgggcaatctgaaaaattctcacacgcaaatagatctcggaattttatttaacacactattgacgggttcatct 8147518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 484 - 668
Target Start/End: Original strand, 770975 - 771165
Alignment:
Q  484 aggggtggtttcaccgcccggcgacc-----ccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaaccaaaa-gctaattaacaga 577  Q
    ||||| ||||||||||||||||||||     ||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||  ||||||| |    
T  770975 aggggcggtttcaccgcccggcgaccggatcccgggcggtcgcccgggctcgatcgataacttttgcacattagacccaaccaaaaagcccattaacaca 771074  T
Q  578 cttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatct 668  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||| |||||||||    
T  771075 cttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaactttatttagcacattattgacgggttcatct 771165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 506 - 669
Target Start/End: Complemental strand, 41251798 - 41251634
Alignment:
Q  506 gaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggcaatc 604  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||  ||||||| | ||||||||||||||||||||||||||    
T  41251798 gaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatc 41251699  T
Q  605 tgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41251698 tgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctc 41251634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 503 - 658
Target Start/End: Original strand, 42439986 - 42440142
Alignment:
Q  503 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggca 601  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||  ||||||| | |||||||||||||||||||||||    
T  42439986 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactaaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 42440085  T
Q  602 atctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgac 658  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  42440086 atctgaaaattgtcacacgcaaataggtcttgcaattttatttagcacactattgac 42440142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 504 - 669
Target Start/End: Complemental strand, 6403970 - 6403804
Alignment:
Q  504 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaaccaaaa-gctaattaacagacttacaaaaagaaaaatttgggcaa 602  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| | | ||||||| | ||| ||||||||||||||||||||    
T  6403970 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacatttataaaaagaaaaatttgggcaa 6403871  T
Q  603 tctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    |||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  6403870 tctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 6403804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 503 - 666
Target Start/End: Complemental strand, 32127308 - 32127144
Alignment:
Q  503 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagac-ctaaccaaaagctaattaacagacttacaaaaagaaaaatttgggca 601  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| || | | ||||||||| ||||||| | |||||||||||||||||| ||||    
T  32127308 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattaaactcgacccaaaagctcattaacacatttacaaaaagaaaaatttaggca 32127209  T
Q  602 atctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcat 666  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  32127208 atctgaaaattgtcacacgcaaatagatcttggaattttatttagcacactattgacgggttcat 32127144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 503 - 666
Target Start/End: Original strand, 35962715 - 35962879
Alignment:
Q  503 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggca 601  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||  |||| ||||||| ||||||| | |||||||||||||| ||||||||    
T  35962715 ggcgaccccaggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcttattaacacatttacaaaaagaaaattttgggca 35962814  T
Q  602 atctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcat 666  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  35962815 atctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcat 35962879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 521 - 669
Target Start/End: Complemental strand, 12756986 - 12756837
Alignment:
Q  521 cccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggcaatctgaaaattctcacac 619  Q
    |||||| |||||||||||||||||| ||||||||| |||| |||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  12756986 cccgggttcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacac 12756887  T
Q  620 gcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||| |||| |||||||||||||||||||||||||| ||||||||||    
T  12756886 gcaaataagtctcggaattttatttagcacactattgacgggttcatctc 12756837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 503 - 669
Target Start/End: Complemental strand, 17445206 - 17445041
Alignment:
Q  503 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggca 601  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||  |||||  |||| ||||||  ||||||| | |||||||||||||||||||||||    
T  17445206 ggcgacctcgggcggtcgcccgagctcgatcgataatttttgcac--tagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 17445109  T
Q  602 atctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17445108 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctc 17445041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 503 - 669
Target Start/End: Complemental strand, 31581789 - 31581622
Alignment:
Q  503 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggca 601  Q
    ||||||| ||||||||||||| ||||||| ||||| |||||||| |||||||  | || ||||||  ||||||| | |||||||||||||||||||||||    
T  31581789 ggcgaccacgggcggtcgcccaggctcgagcgatactttttgcatattagactcatcccaaaagcccattaacacatttacaaaaagaaaaatttgggca 31581690  T
Q  602 atctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  31581689 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 31581622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 490 - 666
Target Start/End: Complemental strand, 8059513 - 8059336
Alignment:
Q  490 ggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaag 588  Q
    |||||||||||||| ||||||||| || |||||| ||||| |||||||||||||||||||||||   |||| |||||| |||||||| ||||||||||||    
T  8059513 ggtttcaccgcccgacgaccccggccgatcgcccaggctcaatcgataatttttgcacattagagtcaacccaaaagccaattaacacacttacaaaaag 8059414  T
Q  589 aaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcat 666  Q
    |||||||||| |||| ||||||||||||||| ||||| ||||| ||||||||||||||||||| |||||| |||||||    
T  8059413 aaaaatttggccaatttgaaaattctcacacacaaatcggtctcggaattttatttagcacacaattgacgggttcat 8059336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 506 - 666
Target Start/End: Original strand, 16405603 - 16405764
Alignment:
Q  506 gaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggcaatc 604  Q
    ||||| |||||||||||||||||| ||||||||||||||||| ||||||  |||| ||||||| ||||||| | ||| |||||||||||||||| |||||    
T  16405603 gaccctgggcggtcgcccgggctcaatcgataatttttgcacgttagactcaacccaaaagctcattaacacatttataaaaagaaaaatttggacaatc 16405702  T
Q  605 tgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcat 666  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  16405703 tgaaaattgtcacacgcaaataagtcttggaattttatttagcacactattgacgggttcat 16405764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 509 - 666
Target Start/End: Original strand, 18981622 - 18981780
Alignment:
Q  509 cccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggcaatctga 607  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||  |||| |||||   ||||| | | ||||||||||||||||||||||||| | |    
T  18981622 cccgggcggtcgtccgggctcgattgataatttttgcacattagactcaacccaaaagtccattaaaacatttacaaaaagaaaaatttgggcaatttaa 18981721  T
Q  608 aaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcat 666  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  18981722 aaattgtcacacgcaaataggtcttggaattttatttagcacactgttgacgggttcat 18981780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 503 - 639
Target Start/End: Complemental strand, 2958267 - 2958131
Alignment:
Q  503 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggca 601  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||  |||| ||||||  ||||||| | ||||||| ||||||||||||| |    
T  2958267 ggcgaccccgggcggtcgtccgggctcgatcgataatttt-gcacattagactcaacccaaaagcccattaacacatttacaaagagaaaaatttgggta 2958169  T
Q  602 atctgaaaattctcacacgcaaataggtcttggaattt 639  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  2958168 atctgaaaattgtcacacgcaaataggtcttggaattt 2958131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 528 - 658
Target Start/End: Original strand, 2285887 - 2286018
Alignment:
Q  528 tcgatcgataatttttgcacattagacctaaccaaaagcta-attaacagacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaata 626  Q
    |||||||||||||||||||||||| | | ||||||||  |  ||||||| | |||| ||| |||||||||| |||||||||||||| |||||||||||||    
T  2285887 tcgatcgataatttttgcacattaaatccaaccaaaaagtctattaacacatttacgaaaggaaaaatttgagcaatctgaaaattgtcacacgcaaata 2285986  T
Q  627 ggtcttggaattttatttagcacactattgac 658  Q
    ||| ||||||||||||||||||||||||||||    
T  2285987 ggttttggaattttatttagcacactattgac 2286018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 483 - 616
Target Start/End: Original strand, 26237937 - 26238071
Alignment:
Q  483 caggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattaga-cctaaccaaaagctaattaacagactta 581  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||  | |||||||||   ||||||| |||||    
T  26237937 caggggtggttttacagcccggcgaccccgggcggtcgcccgggctcgatcgat-atttttgcaaattagatgcaaaccaaaagtccattaacacactta 26238035  T
Q  582 caaaaagaaaaatttgggc-aatctgaaaattctca 616  Q
    ||||||||||||||||||| |||||||||| |||||    
T  26238036 caaaaagaaaaatttgggcaaatctgaaaactctca 26238071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 483 - 628
Target Start/End: Complemental strand, 4555397 - 4555250
Alignment:
Q  483 caggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagactta 581  Q
    ||||||||||| ||||||||||||| | |||||||||||  || ||||||||||||||||||||||| | ||| |||| |||||||  |||||| |||||    
T  4555397 caggggtggttccaccgcccggcgatctcgggcggtcgct-ggactcgatcgataatttttgcacatcaaacccaacccaaaagctcgttaacacactta 4555299  T
Q  582 caaaaagaaaaatttgggc--aatctgaaaattctcacacgcaaatagg 628  Q
    ||||||||||| |||||||  |||||||||||||||||||| |||||||    
T  4555298 caaaaagaaaattttgggcaaaatctgaaaattctcacacgtaaatagg 4555250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 569 - 669
Target Start/End: Complemental strand, 26162799 - 26162702
Alignment:
Q  569 attaacagacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatct 668  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||| || ||||||||||| |||   |||||||||||| ||||||| |||||||||    
T  26162799 attaacacacttacaaaaagaaaaatttgggcaatctaaaaattctcaaacacaaataggtctcgga---ttatttagcacattattgacgggttcatct 26162703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 482 - 533
Target Start/End: Original strand, 34523219 - 34523270
Alignment:
Q  482 ccaggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatc 533  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  34523219 ccaggggcggttttaccgcccggcgaccccgggcggtcgcccgggctcgatc 34523270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 512 - 628
Target Start/End: Complemental strand, 7072710 - 7072589
Alignment:
Q  512 gggcggtcgcccgggctcgatcgataatttttgcacattagac-ctaaccaaaagctaatta--acagacttacaaaaagaaaaatttgggcaa--tctg 606  Q
    ||||||||||||||||||||||||||||||||  |||||| || | | ||||||||  ||||  ||| ||||| ||||||||||  |||| |||  ||||    
T  7072710 gggcggtcgcccgggctcgatcgataatttttttacattaaactcaacccaaaagcccattaacacacacttataaaaagaaaatattggacaaattctg 7072611  T
Q  607 aaaattctcacacgcaaatagg 628  Q
    ||||||||| |||| |||||||    
T  7072610 aaaattctcgcacgtaaatagg 7072589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 203 - 269
Target Start/End: Original strand, 27034840 - 27034906
Alignment:
Q  203 atgccagctttggaatgagctacttcaataccaagaaaatatttgagttgacctaaatccttgattt 269  Q
    ||||| |||||||||||||| || ||||| ||||| || |||||||||||||| | |||||||||||    
T  27034840 atgcctgctttggaatgagcaacctcaatgccaaggaagtatttgagttgaccaagatccttgattt 27034906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 523 - 581
Target Start/End: Original strand, 34905969 - 34906028
Alignment:
Q  523 cgggctcgatcgataatttttgcacattagacctaa-ccaaaagctaattaacagactta 581  Q
    |||||||||||||||||||||||||||||  ||||| ||||||||  ||||||| |||||    
T  34905969 cgggctcgatcgataatttttgcacattaagcctaacccaaaagcccattaacacactta 34906028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 635 - 663
Target Start/End: Original strand, 31392932 - 31392960
Alignment:
Q  635 aattttatttagcacactattgacaggtt 663  Q
    |||||||||||||||||||||||||||||    
T  31392932 aattttatttagcacactattgacaggtt 31392960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 143; Significance: 9e-75; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 480 - 669
Target Start/End: Complemental strand, 3293086 - 3292896
Alignment:
Q  480 ggccaggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagac 578  Q
    ||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||| |||||||| ||    
T  3293086 ggccaggggcggtttcaccgcccagtgaccccgggcggtcgcccgggctcgatcgataatttttgcccattagacccaacccaaaagccaattaacacac 3292987  T
Q  579 ttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||    
T  3292986 ttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 3292896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 484 - 669
Target Start/End: Complemental strand, 30216928 - 30216742
Alignment:
Q  484 aggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttac 582  Q
    ||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||    
T  30216928 aggggcggattcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttac 30216829  T
Q  583 aaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||| ||||||||||    
T  30216828 aaaaagaaaaatttgggcaatctgaaaattctcacatgcaaatagatctcggaattttatttagcacactattgacgggttcatctc 30216742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 483 - 669
Target Start/End: Complemental strand, 6690422 - 6690235
Alignment:
Q  483 caggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagactta 581  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||| |||||||| |||||    
T  6690422 caggggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacactta 6690323  T
Q  582 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||| ||||    
T  6690322 caaaaagaaaaatttgggcaaactgaaaattctcacacgcaaataggtctcgaaattttatttagcacactattgacgggttcgtctc 6690235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 483 - 667
Target Start/End: Complemental strand, 50205264 - 50205079
Alignment:
Q  483 caggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagactta 581  Q
    |||||| |||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||| | |||| |||||| |||||||| |||||    
T  50205264 caggggcggtttcaccgtccggcgatcccgggcggtcgcccgagctcgatcgataatttttgcacattagatccaacccaaaagccaattaacacactta 50205165  T
Q  582 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatc 667  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  50205164 caaaaagaaaaaattggacaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatc 50205079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 490 - 669
Target Start/End: Complemental strand, 43143764 - 43143584
Alignment:
Q  490 ggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaag 588  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||| |||||||| ||||||||||||    
T  43143764 ggtttcaccgtccgacgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaag 43143665  T
Q  589 aaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||  ||||||||||    
T  43143664 aaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 43143584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 490 - 669
Target Start/End: Complemental strand, 42333956 - 42333776
Alignment:
Q  490 ggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaag 588  Q
    |||||||||| || |||| |||||||||||| |||||||| ||||||||||||||||||||||||  |||| |||||| |||||||| ||||||||||||    
T  42333956 ggtttcaccgtccagcgatcccgggcggtcgtccgggctcaatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaag 42333857  T
Q  589 aaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| | |||||||||    
T  42333856 aaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgataagttcatctc 42333776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 491 - 669
Target Start/End: Original strand, 48989316 - 48989495
Alignment:
Q  491 gtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaac-caaaagctaattaacagacttacaaaaaga 589  Q
    ||||||||||||| |||| ||||||||||  ||||| |||||||||||||||||||||||| ||| ||| ||||||   ||||||| |||||||||||||    
T  48989316 gtttcaccgcccgacgactccgggcggtcaaccgggttcgatcgataatttttgcacattaaacccaactcaaaagtccattaacacacttacaaaaaga 48989415  T
Q  590 aaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  48989416 aaaatttgggcaatctgaaaattctcatacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 48989495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 504 - 669
Target Start/End: Original strand, 20129311 - 20129477
Alignment:
Q  504 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggcaa 602  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||  ||||||| | ||||||||||||||||||||||||    
T  20129311 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaa 20129410  T
Q  603 tctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    |||||||||| ||||||| ||||||||||| ||||||||||| ||||||||||||||| ||||||||    
T  20129411 tctgaaaattgtcacacgtaaataggtcttagaattttatttggcacactattgacagtttcatctc 20129477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 503 - 669
Target Start/End: Original strand, 25930708 - 25930875
Alignment:
Q  503 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggca 601  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||| ||  |||| ||||||  ||||||| | |||||||||||||||||||||||    
T  25930708 ggcgaccctgggcggtcgcccgggctcgatctataatttttgcacattaaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 25930807  T
Q  602 atctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    || |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  25930808 atttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 25930875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 504 - 669
Target Start/End: Original strand, 13012189 - 13012355
Alignment:
Q  504 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaaccaaaa-gctaattaacagacttacaaaaagaaaaatttgggcaa 602  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||| ||| ||||||| | ||| ||||||||||||||||||||    
T  13012189 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagattcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaa 13012288  T
Q  603 tctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    | |||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  13012289 tttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 13012355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 504 - 669
Target Start/End: Original strand, 47500774 - 47500940
Alignment:
Q  504 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaaccaaaa-gctaattaacagacttacaaaaagaaaaatttgggcaa 602  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||| ||||||| | |||  |||||||||||||||||||    
T  47500774 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttatgaaaagaaaaatttgggcaa 47500873  T
Q  603 tctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    | |||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  47500874 tttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 47500940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 483 - 651
Target Start/End: Complemental strand, 10353071 - 10352902
Alignment:
Q  483 caggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaaccaaaagcta-attaacagactta 581  Q
    |||||| |||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||  |  ||||||| | |||    
T  10353071 caggggcggtttcaccgtccggcgacccctggcggtcgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagtccattaacacattta 10352972  T
Q  582 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacac 651  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  10352971 caaaaggaaaaatttgggcaatctgaaaattcttacacgcaaataggtctcggaattttatttagcacac 10352902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 483 - 669
Target Start/End: Complemental strand, 28877437 - 28877250
Alignment:
Q  483 caggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagactta 581  Q
    |||||| |||||||||| |||  ||||||| ||||||||  ||||| ||||||||||||||||||||||||   |||| |||||||||||||||  ||||    
T  28877437 caggggcggtttcaccgtccgatgaccccgtgcggtcgcttgggctagatcgataatttttgcacattagattcaacctaaaagctaattaacacgctta 28877338  T
Q  582 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
     ||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||    
T  28877337 taaaaagaaaaatttgggaaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgatgggttcatctc 28877250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 503 - 669
Target Start/End: Complemental strand, 36382512 - 36382346
Alignment:
Q  503 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaaccaaaagcta-attaacagacttacaaaaagaaaaatttgggca 601  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||  ||||||||  |  ||||||| | |||||||| ||||||||||| ||    
T  36382512 ggcgaccccgggcggtcgcccgggctcgatccataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaa-gaaaaatttggaca 36382414  T
Q  602 atctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  36382413 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 36382346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 504 - 669
Target Start/End: Complemental strand, 26439445 - 26439279
Alignment:
Q  504 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggcaa 602  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||  |||| ||||||  ||||||| | ||| ||||||||||||||||||||    
T  26439445 gcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttgggcaa 26439346  T
Q  603 tctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    |||||||||| ||||||| |||||||||||| ||||||||||  |||||||||||||| ||||||||    
T  26439345 tctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctc 26439279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 504 - 669
Target Start/End: Complemental strand, 34407450 - 34407284
Alignment:
Q  504 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggcaa 602  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||  |||| ||||||  ||||||| | ||| ||||||||||||||||||||    
T  34407450 gcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttgggcaa 34407351  T
Q  603 tctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    |||||||||| ||||||| |||||||||||| ||||||||||  |||||||||||||| ||||||||    
T  34407350 tctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctc 34407284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 520 - 669
Target Start/End: Original strand, 44156668 - 44156818
Alignment:
Q  520 gcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggcaatctgaaaattctcaca 618  Q
    |||||||||| | ||||||||||||||||||||||| |||| |||||| |||||||| |||||||||||||||| ||||| |||||||||||||||| ||    
T  44156668 gcccgggctcaaccgataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaattttggacaatctgaaaattctctca 44156767  T
Q  619 cgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  44156768 cgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 44156818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 483 - 653
Target Start/End: Complemental strand, 30077817 - 30077647
Alignment:
Q  483 caggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaaccaaaa-gctaattaacagactta 581  Q
    |||||| |||||||||||||| ||||| ||||||||||||| ||||| |||||||| |||||||||||||||| |||||||| | | ||||||| | |||    
T  30077817 caggggcggtttcaccgcccg-cgacctcgggcggtcgcccaggctcaatcgataaattttgcacattagacccaaccaaaaagttcattaacacattta 30077719  T
Q  582 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacacta 653  Q
    ||||||||||||||||| ||||||||||||| | |||| ||||||||||||| |||||||||||||||||||    
T  30077718 caaaaagaaaaatttggacaatctgaaaatttttacacacaaataggtcttgaaattttatttagcacacta 30077647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 504 - 669
Target Start/End: Original strand, 43355905 - 43356071
Alignment:
Q  504 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggcaa 602  Q
    |||||||| ||| |||||||||||||| |||||||||||||||||||||||  |||| ||||||  ||||||| | ||| ||||||||||||||||||||    
T  43355905 gcgaccccaggcagtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttgggcaa 43356004  T
Q  603 tctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    |||||||||| ||||||| |||||||||||| ||||||||||  |||||||||||||| ||||||||    
T  43356005 tctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctc 43356071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 506 - 666
Target Start/End: Complemental strand, 29319869 - 29319708
Alignment:
Q  506 gaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggcaatc 604  Q
    |||||| |||||||| || ||||||||||||||||||||||||||||||  |||| |||| |  ||||||| | ||||||||||||||||||| ||||||    
T  29319869 gacccctggcggtcgtccaggctcgatcgataatttttgcacattagactcaacccaaaatcccattaacacatttacaaaaagaaaaatttgagcaatc 29319770  T
Q  605 tgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcat 666  Q
    |||||||| |||||| |||||| ||||||||||||||||||||||||||||||| |||||||    
T  29319769 tgaaaattgtcacacacaaataagtcttggaattttatttagcacactattgacgggttcat 29319708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 485 - 656
Target Start/End: Original strand, 26448035 - 26448206
Alignment:
Q  485 ggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttaca 583  Q
    |||| ||||||||||||||||||| ||| ||| ||| |||| ||||||||||||||||||||||||| | |||||| |||||   ||||||| |||||||    
T  26448035 ggggcggtttcaccgcccggcgactccgtgcgatcgtccggactcgatcgataatttttgcacattaaatctaacccaaaagtccattaacacacttaca 26448134  T
Q  584 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattg 656  Q
    |||| |||||||||||||||||||||||||||| || ||||||||| | ||||||||||||||||||||||||    
T  26448135 aaaa-aaaaatttgggcaatctgaaaattctcatacacaaataggtttcggaattttatttagcacactattg 26448206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 490 - 669
Target Start/End: Complemental strand, 29996163 - 29995983
Alignment:
Q  490 ggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaaccaaaagcta-attaacagacttacaaaaag 588  Q
    |||||||||||||| ||| ||||| |||||| |||| |||||||||||||||||| |||||||||  ||||||||  |  ||||||| | |||| |||||    
T  29996163 ggtttcaccgcccgacgatcccggacggtcgtccggactcgatcgataatttttgtacattagactcaaccaaaaagtccattaacacatttacgaaaag 29996064  T
Q  589 aaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||||||||||||||||||  ||||||||||| ||| ||||||||||| |||||||||||||| | ||||||||    
T  29996063 aaaaatttgggcaatctgaaaattcttgcacgcaaatagttctcggaattttattaagcacactattgacggattcatctc 29995983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 527 - 669
Target Start/End: Original strand, 35545977 - 35546120
Alignment:
Q  527 ctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaat 625  Q
    ||||||||| ||||||||| ||| ||||| |||| |||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  35545977 ctcgatcgacaatttttgcgcatcagacccaacccaaaagccaattaacacacttacaaaaagaaaattttgggcaatctgaaaattctcacacgcaaat 35546076  T
Q  626 aggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
     |||||  ||||||||||||||||||||||||  ||||||||||    
T  35546077 gggtctctgaattttatttagcacactattgatgggttcatctc 35546120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 516 - 666
Target Start/End: Original strand, 40529028 - 40529179
Alignment:
Q  516 ggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggcaatctgaaaattct 614  Q
    ||||| |||| ||||||||||||||||||||||||| ||  |||| |||| || ||||||| | |||||||||||||||||||| |||| |||||||| |    
T  40529028 ggtcgtccggactcgatcgataatttttgcacattaaactcaacctaaaaactcattaacacatttacaaaaagaaaaatttggacaatttgaaaattgt 40529127  T
Q  615 cacacgcaaataggtcttggaattttatttagcacactattgacaggttcat 666  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  40529128 cacatgcaaataggtcttggaattttatttagcacactattgacgggttcat 40529179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 513 - 669
Target Start/End: Complemental strand, 17511391 - 17511233
Alignment:
Q  513 ggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggcaatctgaaaat 611  Q
    ||||||||||| | ||||||||||||||||||||||||||||  |||| ||||||  ||||||| | ||||||||||||||||||||||||| |||||||    
T  17511391 ggcggtcgcccagactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatttgaaaat 17511292  T
Q  612 tctcacacgcaaataggtcttgg-aattttatttagcacactattgacaggttcatctc 669  Q
    | | ||||||||||||||||||| |||||||||||||||| ||||||  ||||||||||    
T  17511291 tgttacacgcaaataggtcttggaaattttatttagcacattattgatcggttcatctc 17511233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 569 - 669
Target Start/End: Original strand, 6235587 - 6235687
Alignment:
Q  569 attaacagacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatct 668  Q
    ||||||| | ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6235587 attaacacatttacaaaaagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatct 6235686  T
Q  669 c 669  Q
    |    
T  6235687 c 6235687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 492 - 628
Target Start/End: Original strand, 30109945 - 30110084
Alignment:
Q  492 tttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattaga-cctaaccaaaagctaattaacagacttacaaaaagaa 590  Q
    |||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||| || |||| ||||   ||||||| ||||||||||||||    
T  30109945 tttcaccgcccgacgaccccggacggtcgcccggactcgatcgataatttttgcacattagacccaaacccaaagaccattaacacacttacaaaaagaa 30110044  T
Q  591 aaatttgggc--aatctgaaaattctcacacgcaaatagg 628  Q
    |||||||| |  ||| |||||| |||||||||||||||||    
T  30110045 aaatttggacaaaatatgaaaaatctcacacgcaaatagg 30110084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 483 - 657
Target Start/End: Complemental strand, 13393057 - 13392893
Alignment:
Q  483 caggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaaccaaaagctaattaacagacttac 582  Q
    |||||| ||||||||||||| |||||||||| ||||||||||||||| |||||| | ||||||| |||| | | |||| |||    ||          ||    
T  13393057 caggggcggtttcaccgcccagcgaccccggacggtcgcccgggctcaatcgatgacttttgcatattacatccaacctaaattgtat----------ac 13392968  T
Q  583 aaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattga 657  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  13392967 aaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattga 13392893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 483 - 657
Target Start/End: Complemental strand, 13396196 - 13396032
Alignment:
Q  483 caggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaaccaaaagctaattaacagacttac 582  Q
    |||||| ||||||||||||| |||||||||| ||||||||||||||| |||||| | ||||||| |||| | | |||| |||    ||          ||    
T  13396196 caggggcggtttcaccgcccagcgaccccggacggtcgcccgggctcaatcgatgacttttgcatattacatccaacctaaattgtat----------ac 13396107  T
Q  583 aaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattga 657  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  13396106 aaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattga 13396032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 515 - 628
Target Start/End: Original strand, 48129978 - 48130087
Alignment:
Q  515 cggtcgcccgggctcgatcgataatttttgcacattagacctaa-ccaaaagctaattaacagacttacaaaaagaaaaatttgggcaatctgaaaattc 613  Q
    |||||| ||||||||||||||||||||||||| |||||||| || ||||||||| ||||||| |||||||||||||||||||||||     |||||| ||    
T  48129978 cggtcgaccgggctcgatcgataatttttgcatattagacccaacccaaaagctcattaacacacttacaaaaagaaaaatttggg-----tgaaaactc 48130072  T
Q  614 tcacacgcaaatagg 628  Q
    |||||||||||||||    
T  48130073 tcacacgcaaatagg 48130087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 538 - 669
Target Start/End: Original strand, 1817752 - 1817884
Alignment:
Q  538 atttttgcacattagacctaa-ccaaaagctaattaacagacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaa 636  Q
    |||||||||||||||| | || |||||||   ||||| | | ||| ||||||||||||||||||||||| |||||||| |||||||||||||||| ||||    
T  1817752 atttttgcacattagatccaatccaaaagtccattaatacatttataaaaagaaaaatttgggcaatctaaaaattcttacacgcaaataggtctcggaa 1817851  T
Q  637 ttttatttagcacactattgacaggttcatctc 669  Q
    ||||||||| |||||||||| | | ||||||||    
T  1817852 ttttatttaacacactattgtcggattcatctc 1817884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 482 - 540
Target Start/End: Complemental strand, 49908840 - 49908782
Alignment:
Q  482 ccaggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatt 540  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49908840 ccaggggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatt 49908782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 483 - 540
Target Start/End: Complemental strand, 5517551 - 5517494
Alignment:
Q  483 caggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatt 540  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  5517551 caggggcggtttcaccgcccggcgaccccgggcggtcgcctgggctcgatcgataatt 5517494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 490 - 544
Target Start/End: Original strand, 7769315 - 7769369
Alignment:
Q  490 ggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttg 544  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  7769315 ggtttcaccgtccggcgaccccaggcggtcgcccgggctcgatcgataatttttg 7769369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 483 - 539
Target Start/End: Complemental strand, 6212085 - 6212029
Alignment:
Q  483 caggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataat 539  Q
    |||||| |||||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  6212085 caggggcggtttcaccgtccggcgacctcgggcggtcgcccgagctcgatcgataat 6212029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 491 - 602
Target Start/End: Original strand, 45194164 - 45194276
Alignment:
Q  491 gtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagac-ctaaccaaaagctaattaacagacttacaaaaaga 589  Q
    ||||||||||||| ||||||| |||| | |||||| ||||||| ||||||||||||||||| || | | |||||||   ||||||| ||||||||||| |    
T  45194164 gtttcaccgcccgacgaccccaggcgattgcccggactcgatcaataatttttgcacattaaactcaacccaaaagtccattaacacacttacaaaaaaa 45194263  T
Q  590 aaaatttgggcaa 602  Q
    |||  ||||||||    
T  45194264 aaatattgggcaa 45194276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 485 - 539
Target Start/End: Original strand, 17554978 - 17555032
Alignment:
Q  485 ggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataat 539  Q
    |||| |||||||||| ||| |||||||||| ||||||||||||||||||||||||    
T  17554978 ggggcggtttcaccgtccgacgaccccgggtggtcgcccgggctcgatcgataat 17555032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 482 - 587
Target Start/End: Original strand, 27363340 - 27363446
Alignment:
Q  482 ccaggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaa-ccaaaagctaattaacagactt 580  Q
    ||||||| ||||| ||||   ||||||| |||||||||||||||||||||||||   |||||||| ||||| || || ||||||||  ||||||| ||||    
T  27363340 ccaggggcggttttaccgtatggcgacctcgggcggtcgcccgggctcgatcgaatttttttgcatattaggcccaacccaaaagcccattaacacactt 27363439  T
Q  581 acaaaaa 587  Q
    |||||||    
T  27363440 acaaaaa 27363446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 203 - 269
Target Start/End: Complemental strand, 35088866 - 35088800
Alignment:
Q  203 atgccagctttggaatgagctacttcaataccaagaaaatatttgagttgacctaaatccttgattt 269  Q
    ||||| |||||||||||||| || ||||||||||| || |||||||||||||| | |||||||||||    
T  35088866 atgcctgctttggaatgagcaacctcaataccaaggaagtatttgagttgaccaagatccttgattt 35088800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 490 - 540
Target Start/End: Complemental strand, 50720526 - 50720476
Alignment:
Q  490 ggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatt 540  Q
    |||||||||||||||||||| ||||||||||||||||||| ||| ||||||    
T  50720526 ggtttcaccgcccggcgacctcgggcggtcgcccgggctcaatcaataatt 50720476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 483 - 539
Target Start/End: Complemental strand, 12680249 - 12680193
Alignment:
Q  483 caggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataat 539  Q
    |||||| ||||||||||||| || ||||| |||||| ||||||||||||||||||||    
T  12680249 caggggcggtttcaccgcccagcaaccccaggcggtggcccgggctcgatcgataat 12680193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 528 - 595
Target Start/End: Original strand, 6254569 - 6254637
Alignment:
Q  528 tcgatcgataatttttgcacattagacctaa-ccaaaagctaattaacagacttacaaaaagaaaaatt 595  Q
    |||||||||||||||||||||||| ||| || |||||||  |||||||| |||| |||||| |||||||    
T  6254569 tcgatcgataatttttgcacattaaacccaacccaaaagacaattaacacacttgcaaaaaaaaaaatt 6254637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 635 - 669
Target Start/End: Original strand, 30110108 - 30110142
Alignment:
Q  635 aattttatttagcacactattgacaggttcatctc 669  Q
    |||||||||||||||||||||||| ||||||||||    
T  30110108 aattttatttagcacactattgacgggttcatctc 30110142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 635 - 669
Target Start/End: Original strand, 48130111 - 48130145
Alignment:
Q  635 aattttatttagcacactattgacaggttcatctc 669  Q
    |||||||||||||||||||||||| ||||||||||    
T  48130111 aattttatttagcacactattgacgggttcatctc 48130145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 635 - 663
Target Start/End: Original strand, 4325547 - 4325575
Alignment:
Q  635 aattttatttagcacactattgacaggtt 663  Q
    |||||||||||||||||||||||||||||    
T  4325547 aattttatttagcacactattgacaggtt 4325575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 140; Significance: 6e-73; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 483 - 669
Target Start/End: Original strand, 23402088 - 23402275
Alignment:
Q  483 caggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagactta 581  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||| |||||| |||||||| |||||    
T  23402088 caggggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacacactta 23402187  T
Q  582 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||| ||||||||||    
T  23402188 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcgaaattttatttaacacactattgactggttcatctc 23402275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 490 - 669
Target Start/End: Complemental strand, 16788205 - 16788025
Alignment:
Q  490 ggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaag 588  Q
    |||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||| |||||||| ||||||||||||    
T  16788205 ggtttcattgcccggcaaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaag 16788106  T
Q  589 aaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16788105 aaaaatttgggcaatcttaaaactctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 16788025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 481 - 669
Target Start/End: Complemental strand, 34137014 - 34136825
Alignment:
Q  481 gccaggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagact 579  Q
    |||| |||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||  |||| |||||  |||||||| |||    
T  34137014 gccatgggtggtttcaccgtctggcgaccccgagcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagtcaattaacacact 34136915  T
Q  580 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||  ||||||||||    
T  34136914 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcgaaattttatttagcacacaattgatgggttcatctc 34136825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 490 - 669
Target Start/End: Original strand, 4403995 - 4404175
Alignment:
Q  490 ggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaag 588  Q
    |||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||| |||||| |||||||| ||||||||||||    
T  4403995 ggtttcactggccggcgaccccaggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacatacttacaaaaag 4404094  T
Q  589 aaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||  ||||||||||    
T  4404095 aaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 4404175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 503 - 669
Target Start/End: Complemental strand, 29728553 - 29728386
Alignment:
Q  503 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggca 601  Q
    ||||||||||| |||||||||| ||||||||||||| |||||||||||||||  |||| ||||||| ||||||| | |||||||||||||||||||||||    
T  29728553 ggcgaccccggacggtcgcccgtgctcgatcgataaattttgcacattagactcaacccaaaagctcattaacacatttacaaaaagaaaaatttgggca 29728454  T
Q  602 atctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  29728453 atctgaaaattgtgacacgcaaataggtcttcgaattttatttagcacactattgacgggttcatctc 29728386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 483 - 669
Target Start/End: Original strand, 36408531 - 36408718
Alignment:
Q  483 caggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattaga-cctaaccaaaagctaattaacagactta 581  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || | |||||||   ||||||| | |||    
T  36408531 caggggtggtttcaccgcccggcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagatccaacccaaaagtccattaacacattta 36408630  T
Q  582 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||| ||| |||||| |||||||||| |||||| |||||||||  |||||||||||| |||||||||| | | ||||||||    
T  36408631 caaaaagaaaatttttggcaatttgaaaattcttacacgctaataggtctcagaattttatttaacacactattgccggattcatctc 36408718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 504 - 669
Target Start/End: Original strand, 39914516 - 39914681
Alignment:
Q  504 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaaccaaaa-gctaattaacagacttacaaaaagaaaaatttgggcaa 602  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||| ||||||| | ||| ||||| ||||||||||||||    
T  39914516 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaa-aaaaatttgggcaa 39914614  T
Q  603 tctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    | |||||||| ||||| | ||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  39914615 tttgaaaattgtcacaagtaaataggtcttggaattttatttggcacactattgacagtttcatctc 39914681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 503 - 666
Target Start/End: Original strand, 15838286 - 15838449
Alignment:
Q  503 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaaccaaaagcta-attaacagacttacaaaaagaaaaatttgggca 601  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||| ||  ||||||||  |  ||||||| | |||||||| ||||||||||||||    
T  15838286 ggcgaccccgggcggtcacccgggctcgattgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaa-gaaaaatttgggca 15838384  T
Q  602 atctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcat 666  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15838385 atctgaaaattttcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 15838449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 517 - 669
Target Start/End: Complemental strand, 3648947 - 3648794
Alignment:
Q  517 gtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggcaatctgaaaattctc 615  Q
    ||||||||||||||||||||||||||| ||||||||||  |||| ||||||  ||||||| | |||||||||||||| ||||||||||||||||||| ||    
T  3648947 gtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaattttgggcaatctgaaaattgtc 3648848  T
Q  616 acacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    |||||||| ||||| |||||||||||||||||||||||||||| ||||||||||    
T  3648847 acacgcaagtaggttttggaattttatttagcacactattgacgggttcatctc 3648794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 525 - 669
Target Start/End: Original strand, 9877242 - 9877387
Alignment:
Q  525 ggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaa 623  Q
    |||||||| ||||||||||||||||||||||||||| |||||  |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  9877242 ggctcgattgataatttttgcacattagacctaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacatgcaa 9877341  T
Q  624 ataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    |||||||| | |||||||||||||||||||||| ||  ||||||||    
T  9877342 ataggtctcgaaattttatttagcacactattgtcaaattcatctc 9877387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 484 - 657
Target Start/End: Complemental strand, 2729382 - 2729208
Alignment:
Q  484 aggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattaga-cctaaccaaaagctaattaacagacttac 582  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| | || | ||||||||  ||||||| |||||     
T  2729382 aggggcggtttcaccgcccggcgaccccgggcggacgcccgggctcgatcgataatttttacacattaaatccaatccaaaagcccattaacacacttat 2729283  T
Q  583 aaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattga 657  Q
    |||||||||  ||| |||||| |||||| ||||| ||||||||||||||   |||||||||||||||||||||||    
T  2729282 aaaaagaaattttttggcaatttgaaaactctcatacgcaaataggtctcaaaattttatttagcacactattga 2729208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 519 - 628
Target Start/End: Original strand, 3435285 - 3435397
Alignment:
Q  519 cgcccgggctcgatcgataatttttgcacattagacctaa-ccaaaagctaattaacagacttacaaaaagaaaaatttgggc--aatctgaaaattctc 615  Q
    |||||||||| |||||||||||||||||||||||||| || |||||| |  ||||||| ||||||||||||||||||||||||  |||||||||||||||    
T  3435285 cgcccgggcttgatcgataatttttgcacattagacccaacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaaaatctgaaaattctc 3435384  T
Q  616 acacgcaaatagg 628  Q
    | |||||||||||    
T  3435385 aaacgcaaatagg 3435397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 577 - 669
Target Start/End: Original strand, 42231012 - 42231104
Alignment:
Q  577 acttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||||||||||||||||||| |||||||||||| | ||||||||||||  ||||||||||||||||||||||||| | ||||||||    
T  42231012 acttacaaaaagaaaaatttgggcaatttgaaaattctcatatgcaaataggtctcagaattttatttagcacactattgacggattcatctc 42231104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 487 - 552
Target Start/End: Complemental strand, 10397223 - 10397158
Alignment:
Q  487 ggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattag 552  Q
    ||||||| |||||||||||||| ||||||  |||||||||||| ||||||||||| | ||||||||    
T  10397223 ggtggttacaccgcccggcgactccgggcactcgcccgggctcaatcgataatttcttcacattag 10397158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 635 - 669
Target Start/End: Complemental strand, 40470509 - 40470475
Alignment:
Q  635 aattttatttagcacactattgacaggttcatctc 669  Q
    |||||||||||||||||||||||| ||||||||||    
T  40470509 aattttatttagcacactattgacgggttcatctc 40470475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 526 - 595
Target Start/End: Complemental strand, 40470637 - 40470567
Alignment:
Q  526 gctcgatcgataatttttgcacattaga-cctaaccaaaagctaattaacagacttacaaaaagaaaaatt 595  Q
    |||||||||||||||||||||||||||| || || ||||||   ||||||| ||||| ||||| |||||||    
T  40470637 gctcgatcgataatttttgcacattagacccaaatcaaaagtccattaacacacttataaaaaaaaaaatt 40470567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 124; Significance: 2e-63; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 503 - 669
Target Start/End: Original strand, 5230 - 5397
Alignment:
Q  503 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggca 601  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| || | |||||| |||||||| |||||||||||||||| ||||||||    
T  5230 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggca 5329  T
Q  602 atctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  5330 atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 5397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 124; Significance: 2e-63; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 483 - 669
Target Start/End: Original strand, 31460 - 31647
Alignment:
Q  483 caggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagactta 581  Q
    |||||| ||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||| |||||| |||| ||||||  ||||||| |||||    
T  31460 caggggcggtttcatcgcccggcgaccccagacggtcgcccgggctcgatcgataatttttgcacactagacccaacccaaaagcccattaacacactta 31559  T
Q  582 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||| | |||||||||| ||||||||||||||||||||||||    
T  31560 caaaaagaaaaatttggacaatctgaaaattctcactcgcaaataggtctagtaattttattttgcacactattgacaggttcatctc 31647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 121; Significance: 1e-61; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 490 - 669
Target Start/End: Original strand, 35907539 - 35907719
Alignment:
Q  490 ggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaag 588  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||| |||||| |||||  | ||||||||||||    
T  35907539 ggtttcaccgcccggcgacctcgggcggtcgcccgggcttgatcgataatttttgcacattagacccaacccaaaagccaattagtacacttacaaaaag 35907638  T
Q  589 aaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    |||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||  |||||||||    
T  35907639 aaaattttgggtaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgagttcatctc 35907719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 483 - 668
Target Start/End: Original strand, 17445293 - 17445479
Alignment:
Q  483 caggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagactta 581  Q
    |||||| |||||||  |||||||||||||  ||||||||||||||| |||| |||||||||| |||||||| | |||| |||||  |||||||| |||||    
T  17445293 caggggcggtttcattgcccggcgaccccatgcggtcgcccgggctggatcaataatttttgtacattagatccaacccaaaagtcaattaacacactta 17445392  T
Q  582 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatct 668  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||    
T  17445393 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgggttcatct 17445479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 504 - 669
Target Start/End: Original strand, 26144256 - 26144422
Alignment:
Q  504 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaaccaaaa-gctaattaacagacttacaaaaagaaaaatttgggcaa 602  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||| ||||||| | ||| ||||||||||||||||||||    
T  26144256 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaa 26144355  T
Q  603 tctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    | |||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  26144356 tttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 26144422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 503 - 669
Target Start/End: Complemental strand, 32982223 - 32982056
Alignment:
Q  503 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggca 601  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||| ||||||  ||||||| | |||||||||||||||||||| ||    
T  32982223 ggcgaccccgggcggtcgcgcgggcccgatcgataatttttgcacattagacccaacctaaaagcccattaacatatttacaaaaagaaaaatttggaca 32982124  T
Q  602 atctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  32982123 atctgaaaattgtcacacacaaataggtcttggaattttatttagcactctattgacagattcatctc 32982056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 490 - 669
Target Start/End: Original strand, 3828971 - 3829150
Alignment:
Q  490 ggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaag 588  Q
    ||||||| | |||||| ||||||| ||||||| |||| |||||||||||||||||||||||| ||| |||| ||||| | ||||||| ||||||||||||    
T  3828971 ggtttcatcacccggcaaccccggacggtcgctcgggttcgatcgataatttttgcacattaaacccaacccaaaagttcattaacacacttacaaaaag 3829070  T
Q  589 aaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    |||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  3829071 aaaaatttgggcaatctgaaaattttcatacgcaaataggtc-tggaattttatttagcacactattgacgggttcatctc 3829150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 507 - 666
Target Start/End: Original strand, 7433449 - 7433609
Alignment:
Q  507 accccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggcaatct 605  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||  |||| ||||||  ||||||| | |||||||||||||| ||||||||||||    
T  7433449 accccgggcggtcgcccgagctcgatctataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaattttgggcaatct 7433548  T
Q  606 gaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcat 666  Q
     |||||| |||||| ||||||||||||| |||||||||||||||||||||||| |||||||    
T  7433549 aaaaattgtcacacacaaataggtcttgaaattttatttagcacactattgacgggttcat 7433609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 503 - 669
Target Start/End: Complemental strand, 42311108 - 42310941
Alignment:
Q  503 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggca 601  Q
    ||||||||| | || |||||||||||||||||||||||||||||||||||||  |||| ||||||   |||||| | |||||||||||||||||||||||    
T  42311108 ggcgaccccagacgatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccgttaacacatttacaaaaagaaaaatttgggca 42311009  T
Q  602 atctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||| ||||||||||||| |||||| |||||||||||| || |||||||| ||||||||||    
T  42311008 atctgaaaattgtcacacgcaaataagtcttgaaattttatttagtacgctattgacgggttcatctc 42310941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 490 - 669
Target Start/End: Complemental strand, 321557 - 321377
Alignment:
Q  490 ggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaag 588  Q
    ||||||||| ||||||||   |||||||||| |||||||||||||||||||||||  ||||||| | |||| |||||   ||||||| | ||||||||||    
T  321557 ggtttcaccacccggcgatttcgggcggtcgtccgggctcgatcgataatttttgtgcattagatccaacccaaaagtccattaacacagttacaaaaag 321458  T
Q  589 aaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    |||||||||||||||||||||||||||| | |||||||||||| ||||||||||||| |||| ||||||| ||||||||||    
T  321457 aaaaatttgggcaatctgaaaattctcatatgcaaataggtctcggaattttatttaacacattattgacgggttcatctc 321377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 482 - 628
Target Start/End: Complemental strand, 41972462 - 41972314
Alignment:
Q  482 ccaggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagactt 580  Q
    ||||||| |||| ||||| || ||||||||||||||||||| || ||||||||||||||||||||||||||| | |||| ||||||  ||||||| ||||    
T  41972462 ccaggggcggttccaccgtccagcgaccccgggcggtcgcctgg-ctcgatcgataatttttgcacattagatccaacctaaaagcctattaacacactt 41972364  T
Q  581 acaaaaagaaaaatttgg--gcaatctgaaaattctcacacgcaaatagg 628  Q
    ||||||||||||||||||    ||||||||||||||||||||||||||||    
T  41972363 acaaaaagaaaaatttggaaaaaatctgaaaattctcacacgcaaatagg 41972314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 482 - 628
Target Start/End: Original strand, 33489666 - 33489815
Alignment:
Q  482 ccaggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagac-ctaaccaaaagctaattaacagactt 580  Q
    ||||||| ||||||||| |||||||||||||| ||||||  |||| | | ||||||||||||| ||||||||| | ||| ||||||  ||||||| ||||    
T  33489666 ccaggggcggtttcaccacccggcgaccccggacggtcgttcgggattgttcgataatttttgtacattagactcaaactaaaagcccattaacacactt 33489765  T
Q  581 acaaaaagaaaaatttgggc--aatctgaaaattctcacacgcaaatagg 628  Q
    || |||||||||||||| ||  ||||||||||||||||||||||||||||    
T  33489766 actaaaagaaaaatttgagcaaaatctgaaaattctcacacgcaaatagg 33489815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 484 - 540
Target Start/End: Original strand, 31866958 - 31867014
Alignment:
Q  484 aggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatt 540  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  31866958 aggggcggtttcaccgcccggcgaccccgggcggtcgcccgggttcgaccgataatt 31867014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 511 - 608
Target Start/End: Original strand, 23313246 - 23313345
Alignment:
Q  511 cgggcggtcgcccgggctcgatcgataattt-ttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggcaatctgaa 608  Q
    |||||||| ||||||||||||| ||| |||| |||||||||||||  |||  ||||| | ||||||| | ||||||||||||||||||||||||||||||    
T  23313246 cgggcggttgcccgggctcgattgatgatttgttgcacattagactcaacataaaagttcattaacacatttacaaaaagaaaaatttgggcaatctgaa 23313345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 483 - 539
Target Start/End: Complemental strand, 44352670 - 44352614
Alignment:
Q  483 caggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataat 539  Q
    |||||| |||||||||  |||||||||||||| ||||||||||||||||||||||||    
T  44352670 caggggcggtttcaccatccggcgaccccgggaggtcgcccgggctcgatcgataat 44352614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 212 - 278
Target Start/End: Complemental strand, 52779368 - 52779302
Alignment:
Q  212 ttggaatgagctacttcaataccaagaaaatatttgagttgacctaaatccttgatttgaaatgaag 278  Q
    ||||| ||||| ||||||||||||||||||||||| || || ||||| || ||||||| ||||||||    
T  52779368 ttggagtgagcaacttcaataccaagaaaatatttaagctggcctaagtctttgattttaaatgaag 52779302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 483 - 552
Target Start/End: Complemental strand, 48901291 - 48901223
Alignment:
Q  483 caggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattag 552  Q
    |||||| |||| ||||||||||| || ||||||||| ||| ||| |||||||||||||| ||||||||||    
T  48901291 caggggcggttccaccgcccggcaactccgggcggtggccgggg-tcgatcgataatttatgcacattag 48901223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 635 - 669
Target Start/End: Original strand, 33489839 - 33489873
Alignment:
Q  635 aattttatttagcacactattgacaggttcatctc 669  Q
    |||||||||||||||||||||||| ||||||||||    
T  33489839 aattttatttagcacactattgacgggttcatctc 33489873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 635 - 669
Target Start/End: Complemental strand, 41972290 - 41972256
Alignment:
Q  635 aattttatttagcacactattgacaggttcatctc 669  Q
    |||||||||||||||||||||||| ||||||||||    
T  41972290 aattttatttagcacactattgacgggttcatctc 41972256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 635 - 663
Target Start/End: Original strand, 25017522 - 25017550
Alignment:
Q  635 aattttatttagcacactattgacaggtt 663  Q
    |||||||||||||||||||||||||||||    
T  25017522 aattttatttagcacactattgacaggtt 25017550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 635 - 663
Target Start/End: Complemental strand, 32379895 - 32379867
Alignment:
Q  635 aattttatttagcacactattgacaggtt 663  Q
    |||||||||||||||||||||||||||||    
T  32379895 aattttatttagcacactattgacaggtt 32379867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 115; Significance: 5e-58; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 504 - 669
Target Start/End: Complemental strand, 480623 - 480457
Alignment:
Q  504 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaaccaaaa-gctaattaacagacttacaaaaagaaaaatttgggcaa 602  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||| ||||||| | ||| ||||||||||||||||||||    
T  480623 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaa 480524  T
Q  603 tctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    | |||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  480523 tttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 480457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2142 (Bit Score: 111; Significance: 1e-55; HSPs: 1)
Name: scaffold2142
Description:

Target: scaffold2142; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 504 - 669
Target Start/End: Original strand, 523 - 689
Alignment:
Q  504 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaaccaaaa-gctaattaacagacttacaaaaagaaaaatttgggcaa 602  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||| ||||||| | ||| ||||||||||||||||||||    
T  523 gcgatcccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaa 622  T
Q  603 tctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    | |||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  623 tttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 105; Significance: 4e-52; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 522 - 669
Target Start/End: Original strand, 52944 - 53092
Alignment:
Q  522 ccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggcaatctgaaaattctcacacg 620  Q
    ||||||||||||||||||||||||||||||||  ||||| |||||| |||||||| | |||||||||||||||||||| ||||||||||||||||||| |    
T  52944 ccgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcacatg 53043  T
Q  621 caaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  53044 caaataggtctcggaattttatttagcacactattgacgggttcatctc 53092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 104; Significance: 2e-51; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 503 - 669
Target Start/End: Original strand, 17842 - 18009
Alignment:
Q  503 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacctaacc-aaaagctaattaacagacttacaaaaagaaaaatttgggca 601  Q
    |||||||||| ||| ||| |||||||||||||||||||||||||||||||||  |||| ||||||  ||||||| | |||||||||||||||||||||||    
T  17842 ggcgaccccgagcgatcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 17941  T
Q  602 atctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacaggttcatctc 669  Q
    ||||||||||| ||||| | |||||||||||| |||||||||||||||||||||||||| ||||||||    
T  17942 atctgaaaattgtcacatgtaaataggtcttgaaattttatttagcacactattgacagtttcatctc 18009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 485 - 533
Target Start/End: Original strand, 1259 - 1307
Alignment:
Q  485 ggggtggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatc 533  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  1259 ggggcggttttaccgcccggcgaccccgggcggtcgcccgggctcgatc 1307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 496 - 533
Target Start/End: Original strand, 194021 - 194058
Alignment:
Q  496 accgcccggcgaccccgggcggtcgcccgggctcgatc 533  Q
    ||||||||||||||||||||||||||||||||||||||    
T  194021 accgcccggcgaccccgggcggtcgcccgggctcgatc 194058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0329 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0329
Description:

Target: scaffold0329; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 212 - 278
Target Start/End: Complemental strand, 12697 - 12631
Alignment:
Q  212 ttggaatgagctacttcaataccaagaaaatatttgagttgacctaaatccttgatttgaaatgaag 278  Q
    ||||| ||||| ||||||||||||||||||||||| || || ||||| || ||||||| ||||||||    
T  12697 ttggagtgagcaacttcaataccaagaaaatatttaagctggcctaagtctttgattttaaatgaag 12631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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