View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18991_high_12 (Length: 240)
Name: NF18991_high_12
Description: NF18991
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18991_high_12 |
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Alignment Details
Target: chr2 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 36907798 - 36907574
Alignment:
| Q |
1 |
tagtgaagtctcgtaaatctgagaatctgacatactttacatctccaaaatgtgcgctcttatggattatgatcattgggaagtgtaagatcaaacatgt |
100 |
Q |
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| T |
36907798 |
tagtgaagtctcgtaaatctgagaatctggcatactttacatctccaaaatgtgcgctcttatggattatgatcattgg-aagtgtaagatcaaacatgt |
36907700 |
T |
|
| Q |
101 |
ttatcgtctaactattgtgcatataagcttacacatctggttatgaaggatattttggcttggtggagatgattattcctccttctctttagctgttact |
200 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
36907699 |
ttatcgactaactattgtgcatataagcttacacatctggttatgaatgatattttggcttggtggagatgattattcctccttctctttagttgttact |
36907600 |
T |
|
| Q |
201 |
gtttgatcattgtatatcttctatgt |
226 |
Q |
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|||||||||||||||||||||||||| |
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| T |
36907599 |
gtttgatcattgtatatcttctatgt |
36907574 |
T |
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