View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18991_high_9 (Length: 270)
Name: NF18991_high_9
Description: NF18991
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18991_high_9 |
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Alignment Details
Target: chr1 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 14 - 219
Target Start/End: Original strand, 31820272 - 31820477
Alignment:
| Q |
14 |
ataatactaaaacacacaacaggctattaataattgacgaaatcgagactcccctagatttgtgttatatttttctatccaaaagtacaataggatgctc |
113 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31820272 |
ataatactaaaacacacaacaggctattaataattgacaaaatcgagactcccctagatttgtgttatatttttctatccaaaagtacaataggatgctc |
31820371 |
T |
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| Q |
114 |
actctgttttgggacaatcacatggacaaaatccttgacaaccaatgaatataattagggctaattaggtttaggttttataaggtagttagcggatgat |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31820372 |
actctgttttgggacaatcacatggacaaaatccttgacaacctatgaatataattagggctaattaggtttaggttttataaggtagttagcggatgat |
31820471 |
T |
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| Q |
214 |
tgagct |
219 |
Q |
| |
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|||||| |
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| T |
31820472 |
tgagct |
31820477 |
T |
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