View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18991_low_14 (Length: 239)
Name: NF18991_low_14
Description: NF18991
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18991_low_14 |
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Alignment Details
Target: chr5 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 194697 - 194917
Alignment:
| Q |
2 |
atcacgaaacaatactgttcgtggtgacttgttgaagcccgatgacgactgcattgaatggcttaactcaaagccaacttcctctgtcgtttacattttc |
101 |
Q |
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| T |
194697 |
atcacgaaacaatactgttcgtggtgacttgttgaagcccgatgacgactgcattgaatggcttagctcaaagccaacttcctctgtcgtttaca-tttc |
194795 |
T |
|
| Q |
102 |
ctttggcagcattgtgtacttgaaacaagagcaaattgatgagattgcttatggccttctacaatctggagtttctttcctttgggtaaatgaaaccgcc |
201 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |
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| T |
194796 |
ctttggcagcattgtgtacttgaaacaagagcaaattgatgagattgcttatggccttctacaatctggagtttctttcctctgggt-aatgaaaccgcc |
194894 |
T |
|
| Q |
202 |
ccataaagattctggcaagcaac |
224 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
194895 |
ccataaagattctggcaagcaac |
194917 |
T |
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