View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18992_high_18 (Length: 252)
Name: NF18992_high_18
Description: NF18992
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18992_high_18 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 19 - 252
Target Start/End: Complemental strand, 13059611 - 13059378
Alignment:
| Q |
19 |
gaattgtcctcacatcatacatgcccaattaggacatccaattctcggtaaagtccacattattgattattgtaatgagtgcctggtataggatgtagat |
118 |
Q |
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| T |
13059611 |
gaattgtcctcacatcatacatgcccaattaggacatccaattctcggtaaagtccacattattgattattgtaatgagtgcctggtataggatatggat |
13059512 |
T |
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| Q |
119 |
tgacttggggaggtgttggcgatgcggcttgggctagtgcgagccatcgagaactgttagtgttctagactcactacagttggtcctaatgaagacgagg |
218 |
Q |
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| T |
13059511 |
tgacttggggaggtgttggcgatgcggcttgggctagtgtgagccatcgagaactgttagtgttctagactcactacagttggtcctaatgaagacgagg |
13059412 |
T |
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| Q |
219 |
aaggggtgtaggatgaagaacaagtgtttgaatc |
252 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
13059411 |
aaggggtgtaggatgaagaacaagtgtttgaatc |
13059378 |
T |
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