View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18993_high_102 (Length: 252)

Name: NF18993_high_102
Description: NF18993
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18993_high_102
NF18993_high_102
[»] chr6 (29 HSPs)
chr6 (16-252)||(12891906-12892142)
chr6 (16-87)||(29355857-29355928)
chr6 (18-87)||(14975094-14975163)
chr6 (16-87)||(12221916-12221988)
chr6 (16-87)||(2166412-2166483)
chr6 (16-87)||(2178045-2178116)
chr6 (16-87)||(9161186-9161257)
chr6 (16-76)||(1347035-1347095)
chr6 (16-76)||(1354759-1354819)
chr6 (16-77)||(6808467-6808528)
chr6 (16-87)||(12885975-12886046)
chr6 (16-70)||(26097237-26097291)
chr6 (16-76)||(13267798-13267858)
chr6 (16-76)||(24097650-24097710)
chr6 (16-87)||(3116131-3116202)
chr6 (16-75)||(23930129-23930188)
chr6 (16-67)||(25557805-25557856)
chr6 (21-76)||(32579498-32579553)
chr6 (19-69)||(20906791-20906841)
chr6 (16-74)||(10734907-10734965)
chr6 (46-87)||(6024297-6024338)
chr6 (27-87)||(7947384-7947443)
chr6 (26-74)||(11395836-11395884)
chr6 (14-88)||(15866039-15866111)
chr6 (28-87)||(19340891-19340949)
chr6 (21-94)||(16895704-16895778)
chr6 (18-67)||(30786378-30786427)
chr6 (16-73)||(33922859-33922916)
chr6 (16-72)||(383762-383818)
[»] scaffold0692 (1 HSPs)
scaffold0692 (98-248)||(6314-6464)
[»] chr3 (52 HSPs)
chr3 (15-87)||(353350-353422)
chr3 (16-87)||(13730604-13730675)
chr3 (16-87)||(49013475-49013546)
chr3 (16-87)||(13628792-13628863)
chr3 (16-87)||(10795425-10795496)
chr3 (16-87)||(14987043-14987114)
chr3 (16-87)||(29366722-29366793)
chr3 (31-87)||(9607289-9607345)
chr3 (16-76)||(24851303-24851363)
chr3 (16-76)||(39203609-39203669)
chr3 (16-76)||(40272814-40272874)
chr3 (16-87)||(46421036-46421108)
chr3 (16-76)||(54484786-54484846)
chr3 (16-87)||(5173721-5173792)
chr3 (16-87)||(45786216-45786287)
chr3 (14-87)||(8247686-8247760)
chr3 (16-74)||(30452892-30452950)
chr3 (18-76)||(54374349-54374407)
chr3 (16-76)||(1217183-1217243)
chr3 (16-76)||(15797315-15797375)
chr3 (16-76)||(22122919-22122979)
chr3 (16-76)||(31592942-31593002)
chr3 (16-76)||(34771366-34771426)
chr3 (26-94)||(45948850-45948916)
chr3 (16-76)||(516507-516567)
chr3 (16-76)||(22609860-22609920)
chr3 (16-76)||(25517172-25517232)
chr3 (16-87)||(26573213-26573282)
chr3 (28-76)||(35417999-35418047)
chr3 (16-76)||(52926221-52926281)
chr3 (16-87)||(25944555-25944625)
chr3 (26-87)||(829454-829514)
chr3 (16-69)||(10484618-10484671)
chr3 (30-87)||(33926168-33926224)
chr3 (16-76)||(12914037-12914097)
chr3 (16-76)||(26869801-26869861)
chr3 (27-86)||(34420656-34420714)
chr3 (16-87)||(53996567-53996637)
chr3 (16-62)||(47624208-47624254)
chr3 (16-76)||(16735535-16735595)
chr3 (28-76)||(46169981-46170029)
chr3 (26-76)||(6411834-6411884)
chr3 (34-87)||(30928167-30928218)
chr3 (26-76)||(44403567-44403617)
chr3 (16-94)||(45139480-45139556)
chr3 (16-70)||(45288057-45288111)
chr3 (16-57)||(4495678-4495719)
chr3 (16-57)||(54032573-54032614)
chr3 (16-76)||(24578020-24578080)
chr3 (20-76)||(26292425-26292481)
chr3 (28-76)||(40968613-40968661)
chr3 (34-90)||(55401259-55401314)
[»] chr7 (40 HSPs)
chr7 (16-87)||(42805588-42805659)
chr7 (16-87)||(47716523-47716594)
chr7 (16-76)||(21172011-21172071)
chr7 (16-76)||(32758332-32758392)
chr7 (16-76)||(42391102-42391162)
chr7 (16-76)||(48735124-48735184)
chr7 (16-74)||(45018925-45018983)
chr7 (16-76)||(7879711-7879771)
chr7 (16-76)||(10693075-10693135)
chr7 (16-76)||(31591111-31591171)
chr7 (16-87)||(43557536-43557608)
chr7 (43-87)||(46354258-46354302)
chr7 (16-87)||(39123957-39124028)
chr7 (26-87)||(21566499-21566559)
chr7 (15-76)||(35334817-35334878)
chr7 (16-76)||(2541021-2541081)
chr7 (16-76)||(18512455-18512515)
chr7 (16-76)||(27629707-27629767)
chr7 (16-76)||(27889318-27889378)
chr7 (16-87)||(29907483-29907551)
chr7 (16-76)||(42798742-42798802)
chr7 (16-90)||(18747548-18747620)
chr7 (16-90)||(40463937-40464009)
chr7 (18-76)||(33871914-33871972)
chr7 (16-76)||(11617590-11617650)
chr7 (16-76)||(34626210-34626270)
chr7 (16-76)||(42476944-42477004)
chr7 (16-94)||(38262198-38262274)
chr7 (29-86)||(33500578-33500635)
chr7 (16-76)||(11741866-11741926)
chr7 (16-76)||(19265887-19265946)
chr7 (16-87)||(22698969-22699041)
chr7 (16-76)||(35787271-35787331)
chr7 (17-65)||(42495865-42495913)
chr7 (16-87)||(3469177-3469248)
chr7 (16-87)||(16341342-16341412)
chr7 (26-76)||(23231630-23231680)
chr7 (26-76)||(47077867-47077917)
chr7 (26-87)||(14732833-14732894)
chr7 (16-61)||(36602535-36602580)
[»] chr4 (69 HSPs)
chr4 (16-87)||(20225138-20225209)
chr4 (16-87)||(16408603-16408674)
chr4 (16-87)||(23501851-23501922)
chr4 (17-87)||(21647028-21647098)
chr4 (16-87)||(13256401-13256472)
chr4 (28-87)||(20405151-20405210)
chr4 (16-87)||(33836489-33836560)
chr4 (16-87)||(20639660-20639730)
chr4 (16-94)||(30690178-30690254)
chr4 (16-75)||(32484307-32484366)
chr4 (16-79)||(38755910-38755973)
chr4 (16-83)||(44363132-44363199)
chr4 (14-76)||(29207898-29207960)
chr4 (16-88)||(38786672-38786742)
chr4 (16-76)||(20225055-20225115)
chr4 (16-76)||(25629122-25629182)
chr4 (26-90)||(54730311-54730375)
chr4 (16-87)||(16911626-16911697)
chr4 (16-87)||(30352582-30352653)
chr4 (16-94)||(48327765-48327843)
chr4 (16-94)||(8473622-8473700)
chr4 (16-76)||(11394925-11394985)
chr4 (16-76)||(11404652-11404712)
chr4 (16-76)||(14983907-14983967)
chr4 (16-76)||(30639452-30639512)
chr4 (16-87)||(54175127-54175198)
chr4 (16-87)||(20908638-20908708)
chr4 (16-75)||(40553939-40553998)
chr4 (23-76)||(25463195-25463247)
chr4 (16-65)||(56322984-56323033)
chr4 (16-76)||(5648331-5648391)
chr4 (16-76)||(6430628-6430688)
chr4 (16-76)||(9832315-9832375)
chr4 (16-76)||(11054150-11054210)
chr4 (16-76)||(25388249-25388309)
chr4 (16-76)||(47444030-47444090)
chr4 (16-76)||(47528532-47528592)
chr4 (16-76)||(48598827-48598887)
chr4 (16-74)||(19027986-19028044)
chr4 (28-82)||(47482864-47482918)
chr4 (30-87)||(30581481-30581537)
chr4 (16-76)||(32478794-32478853)
chr4 (16-64)||(35532077-35532125)
chr4 (16-76)||(35567243-35567303)
chr4 (16-76)||(40915901-40915961)
chr4 (17-76)||(17043398-17043456)
chr4 (16-75)||(44718641-44718700)
chr4 (32-87)||(49938611-49938665)
chr4 (16-79)||(50555658-50555721)
chr4 (26-76)||(28494224-28494274)
chr4 (26-76)||(51865050-51865100)
chr4 (16-76)||(7909282-7909343)
chr4 (26-94)||(9987846-9987912)
chr4 (27-76)||(21489161-21489210)
chr4 (30-94)||(16494274-16494338)
chr4 (32-76)||(39029078-39029122)
chr4 (16-76)||(55830723-55830783)
chr4 (16-76)||(5306662-5306726)
chr4 (28-79)||(8820578-8820629)
chr4 (16-87)||(36816386-36816456)
chr4 (17-76)||(54967093-54967151)
chr4 (17-94)||(10660461-10660538)
chr4 (17-94)||(10874606-10874683)
chr4 (18-76)||(39077800-39077858)
chr4 (35-76)||(49796870-49796911)
chr4 (16-87)||(2813189-2813261)
chr4 (23-63)||(37038132-37038172)
chr4 (28-76)||(37494924-37494972)
chr4 (16-76)||(55766468-55766528)
[»] chr8 (40 HSPs)
chr8 (16-87)||(6760886-6760957)
chr8 (16-87)||(7136529-7136600)
chr8 (16-87)||(20869987-20870058)
chr8 (20-87)||(16225083-16225150)
chr8 (16-87)||(25250586-25250657)
chr8 (16-87)||(26954197-26954268)
chr8 (16-87)||(39460996-39461067)
chr8 (20-87)||(20284075-20284142)
chr8 (20-87)||(21070703-21070770)
chr8 (16-76)||(8897766-8897826)
chr8 (16-76)||(30454099-30454159)
chr8 (16-94)||(12625947-12626023)
chr8 (14-76)||(29877167-29877229)
chr8 (16-76)||(12670252-12670312)
chr8 (16-76)||(26102590-26102650)
chr8 (16-76)||(28817628-28817688)
chr8 (16-76)||(35261752-35261812)
chr8 (16-76)||(36720869-36720929)
chr8 (16-76)||(2626595-2626655)
chr8 (16-76)||(13160774-13160834)
chr8 (16-76)||(17823649-17823709)
chr8 (16-76)||(28407476-28407536)
chr8 (20-76)||(44530222-44530278)
chr8 (16-76)||(45071337-45071397)
chr8 (20-87)||(16013518-16013585)
chr8 (20-74)||(27507985-27508039)
chr8 (27-76)||(19729413-19729462)
chr8 (16-87)||(10857893-10857962)
chr8 (27-87)||(17250888-17250948)
chr8 (16-76)||(35107313-35107373)
chr8 (27-87)||(44781517-44781577)
chr8 (16-63)||(27468094-27468141)
chr8 (19-76)||(29521690-29521747)
chr8 (16-76)||(5135292-5135351)
chr8 (18-62)||(18164764-18164808)
chr8 (16-75)||(36486568-36486627)
chr8 (26-87)||(8483950-8484009)
chr8 (34-76)||(24365079-24365121)
chr8 (37-73)||(20869523-20869559)
chr8 (16-76)||(31457245-31457305)
[»] chr5 (43 HSPs)
chr5 (16-87)||(4619106-4619177)
chr5 (16-87)||(13801769-13801840)
chr5 (16-87)||(20135668-20135739)
chr5 (16-87)||(38879645-38879716)
chr5 (16-85)||(25622524-25622593)
chr5 (16-92)||(12006330-12006406)
chr5 (16-76)||(41014391-41014451)
chr5 (16-76)||(16957387-16957447)
chr5 (16-76)||(32703495-32703555)
chr5 (16-87)||(43334267-43334337)
chr5 (16-73)||(16028626-16028683)
chr5 (16-76)||(8169986-8170046)
chr5 (16-76)||(24448963-24449023)
chr5 (16-76)||(34154816-34154876)
chr5 (17-87)||(7368460-7368528)
chr5 (28-87)||(27328816-27328875)
chr5 (16-78)||(30877566-30877628)
chr5 (16-76)||(35710384-35710444)
chr5 (33-87)||(10306493-10306546)
chr5 (26-76)||(43574679-43574729)
chr5 (16-76)||(1565505-1565564)
chr5 (16-76)||(7097762-7097822)
chr5 (26-78)||(29297862-29297914)
chr5 (18-74)||(39801591-39801647)
chr5 (25-76)||(4654426-4654477)
chr5 (16-87)||(12575662-12575732)
chr5 (17-76)||(21784335-21784394)
chr5 (16-70)||(10943847-10943900)
chr5 (16-94)||(11657701-11657778)
chr5 (16-58)||(19438757-19438799)
chr5 (26-76)||(22861681-22861731)
chr5 (27-76)||(19142956-19143005)
chr5 (16-65)||(32354211-32354260)
chr5 (16-87)||(3771403-3771472)
chr5 (16-76)||(16880649-16880709)
chr5 (16-76)||(28516435-28516495)
chr5 (26-87)||(208939-208999)
chr5 (26-87)||(12477132-12477192)
chr5 (16-76)||(1405260-1405320)
chr5 (36-76)||(21542489-21542529)
chr5 (16-68)||(22187368-22187420)
chr5 (16-76)||(29334469-29334529)
chr5 (27-87)||(39079764-39079823)
[»] chr1 (55 HSPs)
chr1 (16-87)||(20004092-20004163)
chr1 (16-87)||(30395728-30395799)
chr1 (16-87)||(50606488-50606559)
chr1 (16-87)||(10668312-10668383)
chr1 (16-94)||(35005203-35005281)
chr1 (16-76)||(4349734-4349794)
chr1 (16-87)||(18944730-18944802)
chr1 (16-76)||(34725100-34725160)
chr1 (14-87)||(19932753-19932826)
chr1 (16-76)||(14617134-14617194)
chr1 (16-76)||(19414533-19414593)
chr1 (23-87)||(19701657-19701720)
chr1 (16-76)||(27474376-27474436)
chr1 (16-76)||(35253189-35253249)
chr1 (16-76)||(46247955-46248015)
chr1 (16-87)||(18741959-18742030)
chr1 (28-87)||(27201734-27201793)
chr1 (16-87)||(42304209-42304280)
chr1 (17-76)||(45402192-45402251)
chr1 (17-76)||(46991900-46991959)
chr1 (19-76)||(4587568-4587625)
chr1 (26-87)||(45264411-45264471)
chr1 (18-94)||(45812541-45812615)
chr1 (16-87)||(9939548-9939620)
chr1 (16-76)||(31382216-31382276)
chr1 (16-76)||(32632559-32632619)
chr1 (16-76)||(38478284-38478344)
chr1 (24-76)||(47214605-47214657)
chr1 (17-76)||(10378738-10378797)
chr1 (26-76)||(6925196-6925246)
chr1 (16-94)||(22324972-22325049)
chr1 (27-72)||(12126850-12126895)
chr1 (16-69)||(16120819-16120872)
chr1 (16-87)||(1517313-1517382)
chr1 (16-76)||(23796561-23796621)
chr1 (27-74)||(33594144-33594191)
chr1 (26-76)||(30555211-30555261)
chr1 (26-87)||(35117777-35117839)
chr1 (34-90)||(11596596-11596650)
chr1 (19-64)||(19386581-19386626)
chr1 (15-87)||(15511149-15511220)
chr1 (28-76)||(23768334-23768382)
chr1 (20-76)||(30682908-30682963)
chr1 (16-87)||(43768226-43768295)
chr1 (14-76)||(1693222-1693285)
chr1 (34-73)||(20169109-20169148)
chr1 (34-76)||(15505660-15505702)
chr1 (25-71)||(18724557-18724602)
chr1 (17-67)||(28894561-28894611)
chr1 (21-87)||(31442396-31442461)
chr1 (26-87)||(2435798-2435858)
chr1 (26-94)||(35019310-35019375)
chr1 (16-76)||(6983813-6983873)
chr1 (16-76)||(8197139-8197199)
chr1 (16-76)||(41319808-41319868)
[»] chr2 (48 HSPs)
chr2 (16-87)||(5841092-5841163)
chr2 (16-87)||(14530382-14530453)
chr2 (16-87)||(10543762-10543833)
chr2 (16-76)||(14444801-14444861)
chr2 (16-76)||(9671252-9671312)
chr2 (16-76)||(10546236-10546296)
chr2 (16-76)||(21779263-21779323)
chr2 (16-75)||(41409936-41409995)
chr2 (16-74)||(34080176-34080234)
chr2 (16-68)||(3633710-3633762)
chr2 (16-76)||(8455318-8455378)
chr2 (19-87)||(23488545-23488613)
chr2 (16-75)||(40579751-40579810)
chr2 (16-69)||(8575975-8576028)
chr2 (16-76)||(14544139-14544199)
chr2 (16-76)||(23397837-23397897)
chr2 (27-94)||(24890468-24890533)
chr2 (16-76)||(25079719-25079779)
chr2 (26-94)||(31158451-31158519)
chr2 (16-76)||(36871565-36871624)
chr2 (16-87)||(24200625-24200696)
chr2 (18-65)||(39189508-39189555)
chr2 (28-74)||(34766330-34766376)
chr2 (16-76)||(13245097-13245157)
chr2 (16-76)||(25249740-25249800)
chr2 (16-76)||(40762236-40762296)
chr2 (16-76)||(44643596-44643656)
chr2 (16-78)||(1289093-1289156)
chr2 (16-62)||(22371199-22371245)
chr2 (27-76)||(4794875-4794924)
chr2 (18-62)||(124918-124962)
chr2 (16-76)||(11514509-11514568)
chr2 (28-76)||(17896333-17896381)
chr2 (16-76)||(39914308-39914367)
chr2 (17-87)||(4516354-4516422)
chr2 (25-87)||(19615056-19615117)
chr2 (26-76)||(24860000-24860050)
chr2 (26-76)||(26684632-26684682)
chr2 (18-87)||(7214598-7214667)
chr2 (31-76)||(19185760-19185805)
chr2 (30-75)||(24059012-24059057)
chr2 (24-65)||(30826119-30826160)
chr2 (27-76)||(31523304-31523353)
chr2 (23-76)||(32781298-32781350)
chr2 (16-57)||(40416873-40416914)
chr2 (16-76)||(17668075-17668135)
chr2 (24-76)||(19977724-19977776)
chr2 (16-76)||(25632582-25632642)
[»] scaffold1176 (1 HSPs)
scaffold1176 (18-94)||(1591-1665)
[»] scaffold0223 (1 HSPs)
scaffold0223 (16-76)||(11202-11262)
[»] scaffold0168 (1 HSPs)
scaffold0168 (16-76)||(30650-30710)
[»] scaffold0057 (4 HSPs)
scaffold0057 (16-76)||(46904-46964)
scaffold0057 (16-76)||(24774-24834)
scaffold0057 (17-95)||(46710-46787)
scaffold0057 (27-76)||(43730-43780)
[»] scaffold0015 (1 HSPs)
scaffold0015 (16-76)||(48636-48696)
[»] scaffold0180 (1 HSPs)
scaffold0180 (16-76)||(24135-24195)
[»] scaffold0049 (1 HSPs)
scaffold0049 (16-87)||(59041-59112)
[»] scaffold0311 (1 HSPs)
scaffold0311 (27-76)||(10883-10932)
[»] scaffold0258 (1 HSPs)
scaffold0258 (16-76)||(13026-13086)
[»] scaffold0018 (1 HSPs)
scaffold0018 (16-76)||(72869-72929)
[»] scaffold0187 (2 HSPs)
scaffold0187 (14-72)||(10050-10108)
scaffold0187 (14-72)||(20378-20436)
[»] scaffold0954 (1 HSPs)
scaffold0954 (26-76)||(3617-3667)
[»] scaffold0254 (1 HSPs)
scaffold0254 (52-87)||(4221-4257)


Alignment Details
Target: chr6 (Bit Score: 225; Significance: 1e-124; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 16 - 252
Target Start/End: Complemental strand, 12892142 - 12891906
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattatatgcatgagaagccttttcatagaat 115  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12892142 agggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattatacgcatgagaagccttttcatagaat 12892043  T
Q  116 aacaaacccaaatgcatacacatatgaaatctacatatgagctttgaaatacagtaccttactaaagccaagccagtttgagtctcctctaaatgaaaat 215  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12892042 aacaaacccaaatgtatacacatatgaaatctacatatgagctttgaaatacagtaccttactaaagccaagccagtttgagtctcctctaaatgaaaat 12891943  T
Q  216 aacttgttgcgttctttccattgtccgcaaaagacct 252  Q
    |||||||||||||||||||||||||||||||||||||    
T  12891942 aacttgttgcgttctttccattgtccgcaaaagacct 12891906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 29355857 - 29355928
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  29355857 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtatt 29355928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 14975094 - 14975163
Alignment:
Q  18 ggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  14975094 ggcaacccggtgcactaaaactcccgcatatgcggggttcgggaaggggtcccaccattattggtgtatt 14975163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 12221916 - 12221988
Alignment:
Q  16 agggcaacctggtgcactaaa-gctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| ||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  12221916 agggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtatt 12221988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 2166412 - 2166483
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| |||||||||||||||||| ||||   ||||||||||||||||||||||||||||||||||||    
T  2166412 agggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtatt 2166483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 2178045 - 2178116
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| |||||||||||||||||| ||||   ||||||||||||||||||||||||||||||||||||    
T  2178045 agggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtatt 2178116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 9161257 - 9161186
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||||||||||||||||||||||| ||||||| || ||||||| ||||||||||||||||||||| ||||||    
T  9161257 agggcaacctggtgcactaaagcttccgcatacgcagggtccgagaaggggtcccaccattattgatgtatt 9161186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 1347095 - 1347035
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  1347095 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatt 1347035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 1354759 - 1354819
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  1354759 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatt 1354819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 6808528 - 6808467
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatta 77  Q
    ||||||||| ||||||||||||||||||||||  | ||||||||||||||||||||||||||    
T  6808528 agggcaacccggtgcactaaagctcccgcatacacagggtccgggaaggggtcccaccatta 6808467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 12886046 - 12885975
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| ||||||||||||||||| |||| || ||||| ||||||||||||||||||| || |||||||    
T  12886046 agggcaacccggtgcactaaagctcccacatacgcagggtctgggaaggggtcccaccattttttgtgtatt 12885975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 26097291 - 26097237
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtccc 70  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||    
T  26097291 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtccc 26097237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 13267858 - 13267798
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||||| ||||||||||||| || |||||| ||||||||||||||||||    
T  13267858 agggcaacccggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatt 13267798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 24097710 - 24097650
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||||||  |||||||||| ||||||| || |||||||||||||||||||||||||    
T  24097710 agggcaacctgggacactaaagcttccgcatacgcagggtccgggaaggggtcccaccatt 24097650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 3116131 - 3116202
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||| | |||| ||||||||||||||||| ||  |||||| ||||||||||||||||| ||||||||||    
T  3116131 agggcaatccggtgtactaaagctcccgcatacgcaaggtccgagaaggggtcccaccatttttggtgtatt 3116202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 23930129 - 23930188
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccat 75  Q
    ||||||||  |||||||||||||||||||||| || ||||||| ||||||||||||||||    
T  23930129 agggcaactcggtgcactaaagctcccgcataagcagggtccgtgaaggggtcccaccat 23930188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 25557856 - 25557805
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggt 67  Q
    ||||||||| ||||||||| ||||||||||||||| ||||||||||||||||    
T  25557856 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggt 25557805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 32579553 - 32579498
Alignment:
Q  21 aacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||| | |||||||||||||||||||| ||||| |||||||||||||||||||    
T  32579553 aacctggagtactaaagctcccgcatatgcagggtctgggaaggggtcccaccatt 32579498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 20906791 - 20906841
Alignment:
Q  19 gcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcc 69  Q
    ||||| |||| ||||||||||||||||||||||||||| ||||||||||||    
T  20906791 gcaacttggttcactaaagctcccgcatatgcggggtctgggaaggggtcc 20906841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 10734907 - 10734965
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccacca 74  Q
    |||||| || |||| ||||||||||||||||| || ||||||||||||||| |||||||    
T  10734907 agggcagcccggtggactaaagctcccgcatacgcagggtccgggaagggggcccacca 10734965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 6024338 - 6024297
Alignment:
Q  46 tatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||||||||||||||||| ||||||| |||||||||||||||    
T  6024338 tatgcggggtccgggaagaggtcccatcattattggtgtatt 6024297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 7947384 - 7947443
Alignment:
Q  27 gtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||||||||||||||| |||| ||  |||||||||||||| ||||||||| ||||||||||    
T  7947384 gtgcactaaagctcccacatacgcaaggtccgggaagggggcccaccatt-ttggtgtatt 7947443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 11395884 - 11395836
Alignment:
Q  26 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccacca 74  Q
    |||| ||||||||||||||||| || || ||||||||||||||||||||    
T  11395884 ggtggactaaagctcccgcatacgcaggatccgggaaggggtcccacca 11395836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 15866039 - 15866111
Alignment:
Q  14 atagggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatta 88  Q
    ||||||||||   |||||||| || ||||||| | || ||||||||||||||||||||||||  |||||||||||    
T  15866039 atagggcaactcagtgcactatagatcccgcaaacgcagggtccgggaaggggtcccaccat--ttggtgtatta 15866111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 19340949 - 19340891
Alignment:
Q  28 tgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||||||||||| ||||||| || |||||| ||||||||||||| |||| ||||||||||    
T  19340949 tgcactaaagcttccgcatacgccgggtccaggaaggggtcccatcatt-ttggtgtatt 19340891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 16895704 - 16895778
Alignment:
Q  21 aacctggtgcactaaagctcccgcatatgcggggtccgggaa-ggggtcccaccattattggtgtattatatgca 94  Q
    |||| ||||||||||| || || ||||||  ||||||||||| |||||||||||||| || ||||||| ||||||    
T  16895704 aacccggtgcactaaaacttccacatatgtagggtccgggaagggggtcccaccatttttagtgtattgtatgca 16895778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 30786378 - 30786427
Alignment:
Q  18 ggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggt 67  Q
    ||||||| |||||||||||||||||||||| ||  ||||| |||||||||    
T  30786378 ggcaacccggtgcactaaagctcccgcatacgcacggtccaggaaggggt 30786427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 33922859 - 33922916
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccacc 73  Q
    |||||||||  |||||||||||||||  |||| || |||||||||||||||| |||||    
T  33922859 agggcaaccatgtgcactaaagctccaacataagcagggtccgggaaggggtgccacc 33922916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 383762 - 383818
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccac 72  Q
    ||||||||| |||| ||| ||||||||||||| || ||||| | |||||||||||||    
T  383762 agggcaacccggtggactgaagctcccgcatacgcagggtctgagaaggggtcccac 383818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 139; Significance: 8e-73; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 98 - 248
Target Start/End: Complemental strand, 6464 - 6314
Alignment:
Q  98 gaagccttttcatagaataacaaacccaaatgcatacacatatgaaatctacatatgagctttgaaatacagtaccttactaaagccaagccagtttgag 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  6464 gaagccttttcatagaataacaaacccaaatgcatacacatatgaaatctagatatgagctttgaaatacagtaccttactaaagccaagccaatttgag 6365  T
Q  198 tctcctctaaatgaaaataacttgttgcgttctttccattgtccgcaaaag 248  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6364 tctcctctaaacgaaaataacttgttgcgttctttccattgtccgcaaaag 6314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 5e-31; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 353350 - 353422
Alignment:
Q  15 tagggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  353350 tagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 353422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 13730604 - 13730675
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13730604 agggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 13730675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 49013475 - 49013546
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  49013475 agggcaacccggtgcactaaagctcccgcgtatgcggggtccgggaaggggtcccaccattattggtgtatt 49013546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 13628792 - 13628863
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  13628792 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtatt 13628863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 10795425 - 10795496
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||||||||||||||||| ||||||||||||| || |||||| |||||||||||||||||| ||||||||||    
T  10795425 agggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtatt 10795496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 14987114 - 14987043
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||| |||| |||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||    
T  14987114 agggaaacccggtgcactaaagctcccgcatatgcaaggtccgggaatgggtcccaccattattggtgtatt 14987043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 29366722 - 29366793
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||||||||  |||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||    
T  29366722 agggcaacccagtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattattggtgtatt 29366793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 9607345 - 9607289
Alignment:
Q  31 actaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  9607345 actaaagctcccgcatatgcggggtctgggaaggggtcccaacattattggtgtatt 9607289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 24851303 - 24851363
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  24851303 agggcaacccggtgcactaaagctcccgcatatgcaggatccgggaaggggtcccaccatt 24851363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 39203669 - 39203609
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  39203669 agggcaacccggtgcactaaagctcccgcatatgcaaggtccgggaaggggtcccaccatt 39203609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 40272814 - 40272874
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||    
T  40272814 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 40272874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 46421036 - 46421108
Alignment:
Q  16 agggcaacctggtgcact-aaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||| | |||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  46421036 agggcaaaccggtgcacttaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtatt 46421108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 54484846 - 54484786
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||    
T  54484846 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 54484786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 5173721 - 5173792
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| |||||||||||||||||||||| ||  |||||||||||||| ||||||||| ||||||||||    
T  5173721 agggcaacccggtgcactaaagctcccgcatacgcaaggtccgggaaggggccccaccatttttggtgtatt 5173792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 45786216 - 45786287
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| |||||||||||||||| ||||  || ||||||||||||||||||||||||| ||||||||||    
T  45786216 agggcaacccggtgcactaaagctccagcattcgcagggtccgggaaggggtcccaccatttttggtgtatt 45786287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 8247686 - 8247760
Alignment:
Q  14 atagggcaacctggtgcact-aaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||||||||||  ||||||| |||||||||||||| || ||||||||||||| ||||||||||||||||||||||    
T  8247686 atagggcaacccagtgcacttaaagctcccgcatacgcagggtccgggaaggagtcccaccattattggtgtatt 8247760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 30452950 - 30452892
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccacca 74  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  30452950 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca 30452892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 54374349 - 54374407
Alignment:
Q  18 ggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  54374349 ggcagcctggtgaactaaagctcccgcatatgcagggtccgggaaggggtcccaccatt 54374407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 1217243 - 1217183
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||| |||||    
T  1217243 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccgccatt 1217183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 15797375 - 15797315
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||| ||||||| ||||||| |||||||||||||||||||||||||    
T  15797375 agggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccatt 15797315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 22122919 - 22122979
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||| ||||| ||||||||| |||||||||||||||||||||||||    
T  22122919 agggcaacccggtgcactagagctctcgcatatgcagggtccgggaaggggtcccaccatt 22122979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 31593002 - 31592942
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||| ||||||||||||||| ||||||||||||| |||||||||||    
T  31593002 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggagtcccaccatt 31592942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 34771366 - 34771426
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||| || ||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  34771366 agggcagcccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatt 34771426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 45948850 - 45948916
Alignment:
Q  26 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattatatgca 94  Q
    |||||||||||||||||||||| || ||||||| |||||||||||||||  ||||||||||| ||||||    
T  45948850 ggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccacca--attggtgtattgtatgca 45948916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 516567 - 516507
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||||||||||||||||||| || ||||| ||||||||||||| |||||    
T  516567 agggcaacccggtgcactaaagctcccgcatacgcagggtcggggaaggggtcccgccatt 516507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 22609920 - 22609860
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||||| ||||||||||||| ||  ||||||||||||||||||||||||    
T  22609920 agggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatt 22609860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 25517172 - 25517232
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||||||||||||| ||||| || || ||||||||||||||||||||||    
T  25517172 agggcaacccggtgcactaaagctccagcatacgcaggatccgggaaggggtcccaccatt 25517232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 26573282 - 26573213
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||||| |||||||||||||||||| |||||| || |||||||||| ||||||||||||  |||||||||||    
T  26573282 agggcagcctggtgcactaaagctcacgcatacgcagggtccgggatggggtcccacca--attggtgtatt 26573213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 35418047 - 35417999
Alignment:
Q  28 tgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  35418047 tgcactaaagctctcgcatttgcggggtccgggaaggggtcccaccatt 35417999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 52926221 - 52926281
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||| |||||||||||||||| || ||||||||||||| |||||||||||    
T  52926221 agggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaaggtgtcccaccatt 52926281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 25944625 - 25944555
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||||| |||||||| ||||||||||| |||| || ||||| ||||||||||||||||||| ||||||||||    
T  25944625 agggcagcctggtgcgctaaagctcccacatacgcagggtcagggaaggggtcccaccatt-ttggtgtatt 25944555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 829454 - 829514
Alignment:
Q  26 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||||||||||||||| ||||| || |||| |||||||||||||||||||| ||||||||||    
T  829454 ggtgcactaaagctcctgcatacgcagggttcgggaaggggtcccaccatt-ttggtgtatt 829514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 10484618 - 10484671
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcc 69  Q
    ||||||||| |||||||||||||||||||||| || |||||| |||||||||||    
T  10484618 agggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcc 10484671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 33926224 - 33926168
Alignment:
Q  30 cactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||||| ||||||||| |||||| ||||||||||||||||||| |||||||||    
T  33926224 cactaaagctctcgcatatgcagggtccaggaaggggtcccaccatta-tggtgtatt 33926168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 12914037 - 12914097
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||| | |||||||||||||||| ||||| ||||||||||| |||||||    
T  12914037 agggcaacccggtgcattgaagctcccgcatatgcagggtctgggaaggggtctcaccatt 12914097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 26869861 - 26869801
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||| |||||||||||||| ||  ||||||| ||||||||||||||||    
T  26869861 agggcaacccggtgcaccaaagctcccgcatacgcatggtccggcaaggggtcccaccatt 26869801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 86
Target Start/End: Original strand, 34420656 - 34420714
Alignment:
Q  27 gtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtat 86  Q
    |||||||||||||||| |||| ||  |||||||||||||||||||||||| |||||||||    
T  34420656 gtgcactaaagctcccacatacgcaaggtccgggaaggggtcccaccatt-ttggtgtat 34420714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 53996567 - 53996637
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||||| || ||||||||||||||||| |||| || | ||| ||||||||||||||||||| ||||||||||    
T  53996567 agggcagcccggtgcactaaagctcccacatacgcagtgtcagggaaggggtcccaccatt-ttggtgtatt 53996637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 47624254 - 47624208
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaa 62  Q
    ||||||||| |||||||||||||||||||||| || |||||||||||    
T  47624254 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 47624208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 16735595 - 16735535
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||||||  ||||||| ||||| ||||||| || | |||||||||||||||||||||||    
T  16735595 agggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatt 16735535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 46169981 - 46170029
Alignment:
Q  28 tgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||| |||||||| ||||||| |||||||||||||||||| ||||||    
T  46169981 tgcactgaagctcccacatatgcagggtccgggaaggggtcctaccatt 46170029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 6411834 - 6411884
Alignment:
Q  26 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||||||||||||||||||| ||  |||| |||||||||||||| ||||    
T  6411834 ggtgcactaaagctcccgcatacgcaaggtctgggaaggggtcccatcatt 6411884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 30928167 - 30928218
Alignment:
Q  34 aaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| ||||||| ||||||||||||||||||| |||  |||||||||||    
T  30928167 aaagctcccacatatgcagggtccgggaaggggtcccgcca--attggtgtatt 30928218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 44403567 - 44403617
Alignment:
Q  26 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||||||||||| | ||||| |  |||||||||||||||||||||||||    
T  44403567 ggtgcactaaagcttcagcatacgtagggtccgggaaggggtcccaccatt 44403617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 45139480 - 45139556
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattatatgca 94  Q
    |||||| || ||||||| |||| ||||||||| || || || ||||||||||||||||||| |||||||||| ||||||    
T  45139480 agggcagcccggtgcac-aaagttcccgcatacgcagg-tctgggaaggggtcccaccatttttggtgtattgtatgca 45139556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 45288057 - 45288111
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtccc 70  Q
    |||||| ||||||||||||||||||  ||||| || |||||||||||| ||||||    
T  45288057 agggcagcctggtgcactaaagctcttgcatacgcagggtccgggaagaggtccc 45288111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 4495678 - 4495719
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtcc 57  Q
    ||||||||| |||||||||||||||||||||| || ||||||    
T  4495678 agggcaacccggtgcactaaagctcccgcatacgcagggtcc 4495719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 54032573 - 54032614
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtcc 57  Q
    ||||||||| |||||||||||||||||||||| || ||||||    
T  54032573 agggcaacccggtgcactaaagctcccgcatacgcagggtcc 54032614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 24578080 - 24578020
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||| || |||||||||||  ||||| ||||| | |||||||||||    
T  24578080 agggcaacccggtgcactagagttcccgcatatgtagggtctgggaaagagtcccaccatt 24578020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 26292481 - 26292425
Alignment:
Q  20 caacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||| ||||||||| || |||||||||||| |||| ||||||||| ||||| ||||    
T  26292481 caacccggtgcactagagttcccgcatatgcagggttcgggaagggatcccatcatt 26292425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 40968661 - 40968613
Alignment:
Q  28 tgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||||||||||||||||  |||||  |||||||||| |||||||    
T  40968661 tgcactaaagctcccgcatatgtagggtctaggaaggggtctcaccatt 40968613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 55401314 - 55401259
Alignment:
Q  34 aaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattata 90  Q
    |||||||||||||| |   |||||| ||||||||||||||||| |||||||||||||    
T  55401314 aaagctcccgcatacggaaggtccgagaaggggtcccaccatt-ttggtgtattata 55401259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 2e-30; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 42805659 - 42805588
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42805659 agggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 42805588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 47716594 - 47716523
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47716594 agggcaacccggtgcaccaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 47716523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 21172011 - 21172071
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  21172011 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatt 21172071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 32758392 - 32758332
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  32758392 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatt 32758332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 42391102 - 42391162
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  42391102 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatt 42391162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 48735124 - 48735184
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  48735124 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatt 48735184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 45018925 - 45018983
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccacca 74  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||    
T  45018925 agggcaacctggtgcactaaagctcccgcatacgcagggtccgggaaggggttccacca 45018983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 7879771 - 7879711
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||||| ||||||||||||| || |||||||||||||||||||||||||    
T  7879771 agggcaacccggtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatt 7879711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 10693075 - 10693135
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||||||  |||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  10693075 agggcaacccagtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatt 10693135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 31591111 - 31591171
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  31591111 agggcaacccggtgcactagagctcccgcatatgcaaggtccgggaaggggtcccaccatt 31591171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 43557608 - 43557536
Alignment:
Q  16 agggcaacctggtgcactaaa-gctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| ||||||||||| ||||||||||| || | |||||||| |||||||||||||||||||||||||    
T  43557608 agggcaacccggtgcactaaaagctcccgcatacgcagagtccgggagggggtcccaccattattggtgtatt 43557536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 46354302 - 46354258
Alignment:
Q  43 gcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  46354302 gcatatgcggggtccgggaaggggtcccaccattattggtgtatt 46354258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 39124028 - 39123957
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||||| | |||||||| ||||||||| |||| || ||||||||||||||||||||||||| ||||||||||    
T  39124028 agggcagcttggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtatt 39123957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 21566559 - 21566499
Alignment:
Q  26 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||||||||||||||||||| |||| ||||||||||||| |||||| ||||||||||    
T  21566559 ggtgcactaaagctcccgcatatgcagggttcgggaaggggtcctaccatt-ttggtgtatt 21566499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 35334817 - 35334878
Alignment:
Q  15 tagggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||| |||| |||||||||||||||| ||||| || |||||||||||||||||||||||||    
T  35334817 tagggaaacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccatt 35334878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 2541021 - 2541081
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||| |||| |||||||||||||||||||||| || ||| |||||||||||||||||||||    
T  2541021 agggaaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccatt 2541081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 18512455 - 18512515
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||||||  |||||| |||||||||||||| || |||||||||||||||||||||||||    
T  18512455 agggcaacccagtgcaccaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 18512515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 27629767 - 27629707
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||||| ||||| |||||||||| ||| |||||||||||||||||||||    
T  27629767 agggcaacccggtgcactgaagctaccgcatatgcagggcccgggaaggggtcccaccatt 27629707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 27889318 - 27889378
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||| || |||||||||||||| || |||||||||||||||||||||||||    
T  27889318 agggcaacccggtgtaccaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 27889378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 29907551 - 29907483
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| ||||||||||||||||||||||  | |||||||||| |||||||||||||| ||||||||||    
T  29907551 agggcaacccggtgcactaaagctcccgcata--cagggtccgggatggggtcccaccatt-ttggtgtatt 29907483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 42798802 - 42798742
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| | ||||||| ||||||||||||||| ||||||||||| |||||||||||||    
T  42798802 agggcaacccgatgcactatagctcccgcatatgcagggtccgggaaagggtcccaccatt 42798742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 18747620 - 18747548
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattata 90  Q
    |||||| || |||||||||||||||||||||| || |||| | ||||||||||||||||  ||||||||||||||    
T  18747620 agggcagcccggtgcactaaagctcccgcatacgcagggttcaggaaggggtcccacca--attggtgtattata 18747548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 40464009 - 40463937
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattata 90  Q
    ||||||||  |||||||| ||||||||||||| || ||||||| ||||||||||||||||  |||||||||||||    
T  40464009 agggcaactcggtgcactgaagctcccgcatacgcagggtccgagaaggggtcccaccat--ttggtgtattata 40463937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 33871914 - 33871972
Alignment:
Q  18 ggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||||||||||||||||| ||||||  | ||||| |||||||||||||||||||    
T  33871914 ggcaacctggtgcactaaagctctcgcatacacagggtctgggaaggggtcccaccatt 33871972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 11617590 - 11617650
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||||||||| ||| ||||| || |||||| ||||||||||||||||||    
T  11617590 agggcaacccggtgcactaaaggtcctgcatacgcagggtccaggaaggggtcccaccatt 11617650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 34626210 - 34626270
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| | || ||||||||||||||||| || |||||||||||||| ||||||||||    
T  34626210 agggcaacccgatgaactaaagctcccgcatacgcagggtccgggaagggatcccaccatt 34626270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 42477004 - 42476944
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||||||||||||| ||||||||||||||| | | |  ||||||||||||||||||    
T  42477004 agggcaacctggtgcactagagctcccgcatatgcagagcctaggaaggggtcccaccatt 42476944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 38262198 - 38262274
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattatatgca 94  Q
    ||||||| | |||||||||||||||||||||| || | || ||||||||||||||| |||  |||||||||| ||||||    
T  38262198 agggcaatccggtgcactaaagctcccgcatacgcagtgttcgggaaggggtcccatcat--ttggtgtattgtatgca 38262274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 33500635 - 33500578
Alignment:
Q  29 gcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtat 86  Q
    ||||| ||| ||||||||| || ||||||||||||||||||||||||| || ||||||    
T  33500635 gcactgaagatcccgcatacgcagggtccgggaaggggtcccaccattttttgtgtat 33500578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 11741926 - 11741866
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||| ||||||||||| ||| |  ||||||||||| ||||||||||    
T  11741926 agggcaacccggtgcactagagctcccgcatgtgcagaatccgggaagggatcccaccatt 11741866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 19265946 - 19265887
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||| || ||||||||||||||||| ||||||  || ||||||||||||||||||||||    
T  19265946 agggcagcccggtgcactaaagctcccacatatgtagg-tccgggaaggggtcccaccatt 19265887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 22698969 - 22699041
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccggg-aaggggtcccaccattattggtgtatt 87  Q
    |||| |||| ||||||||| ||||||||||||  | ||||||||| || ||||||||||||| ||||||||||    
T  22698969 agggtaacccggtgcactatagctcccgcatacacagggtccgggaaaagggtcccaccatttttggtgtatt 22699041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 35787271 - 35787331
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||| | ||||||||||||| ||  |||||||||||||||||| |||||    
T  35787271 agggcaacccggtgcattgaagctcccgcatacgcaaggtccgggaaggggtcccgccatt 35787331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 42495865 - 42495913
Alignment:
Q  17 gggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggg 65  Q
    |||||||  |||||||||||||||||||||| || ||||||||||||||    
T  42495865 gggcaacggggtgcactaaagctcccgcatacgcagggtccgggaaggg 42495913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 3469177 - 3469248
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||||||||  | |||||||||||||||||||  | |||||  |||||||||||| ||||| ||||||||||    
T  3469177 agggcaacccagcgcactaaagctcccgcatacacagggtctaggaaggggtcccgccatttttggtgtatt 3469248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 16341412 - 16341342
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||||| || ||||||| ||||||||||||||||   ||||||||||| || ||||||||| ||||||||||    
T  16341412 agggcagcccggtgcaccaaagctcccgcatatgataggtccgggaagagggcccaccatt-ttggtgtatt 16341342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 23231680 - 23231630
Alignment:
Q  26 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||||||||||| ||||||| || |||| ||||||||||||||| ||||    
T  23231680 ggtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatcatt 23231630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 47077867 - 47077917
Alignment:
Q  26 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||||||||  ||||  |||||||||||||||||||    
T  47077867 ggtgcactagagctcccgcatatgtagggtttgggaaggggtcccaccatt 47077917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 14732833 - 14732894
Alignment:
Q  26 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||||||||||||||||  | |||| |||||||| ||  ||||||| ||||||||||    
T  14732833 ggtgcactaaagctcccgcataaacagggttcgggaaggagtttcaccatttttggtgtatt 14732894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 36602580 - 36602535
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccggga 61  Q
    ||||||||| |||||||||||||||||||||| || ||||| ||||    
T  36602580 agggcaacccggtgcactaaagctcccgcatacgcagggtctggga 36602535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 2e-30; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 20225209 - 20225138
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20225209 agggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 20225138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 16408603 - 16408674
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16408603 agggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggttccaccattattggtgtatt 16408674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 23501922 - 23501851
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23501922 agggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattattggtgtatt 23501851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 21647098 - 21647028
Alignment:
Q  17 gggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  21647098 gggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtatatt 21647028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 13256401 - 13256472
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||    
T  13256401 agggcaacccggtgcactaaagctcccgcagatgcggggttcgggaaggggtcccactattattggtgtatt 13256472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 20405210 - 20405151
Alignment:
Q  28 tgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20405210 tgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattagtgtatt 20405151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 33836489 - 33836560
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| | |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  33836489 agggcaacccgttgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtatt 33836560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 20639660 - 20639730
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||    
T  20639660 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt-ttggtgtatt 20639730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 30690178 - 30690254
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattatatgca 94  Q
    |||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||  ||||||||||| ||||||    
T  30690178 agggcagcctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--attggtgtattgtatgca 30690254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 32484366 - 32484307
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccat 75  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32484366 agggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccat 32484307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 38755910 - 38755973
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattatt 79  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  38755910 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattatt 38755973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 44363132 - 44363199
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtg 83  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||    
T  44363132 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtg 44363199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 29207898 - 29207960
Alignment:
Q  14 atagggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  29207898 atagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatt 29207960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 38786742 - 38786672
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatta 88  Q
    ||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||  |||||||||||    
T  38786742 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccat--ttggtgtatta 38786672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 20225115 - 20225055
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  20225115 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatt 20225055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 25629182 - 25629122
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  25629182 agggcaacccggtgcactaaagctcccgcatatgtagggtccgggaaggggtcccaccatt 25629122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 54730375 - 54730311
Alignment:
Q  26 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattata 90  Q
    |||||||||||||||||||||| || |||||||||||||||| ||| ||||||||||||||||||    
T  54730375 ggtgcactaaagctcccgcatacgcagggtccgggaaggggttccatcattattggtgtattata 54730311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 16911697 - 16911626
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| |||  |||||||||||||| || || ||||||||||||||||||||||||||||||||||||    
T  16911697 agggcaacccggtaaactaaagctcccgcgtacgcagggtccgggaaggggtcccaccattattggtgtatt 16911626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 30352582 - 30352653
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||  |||||||||||||||||||||| || ||||||| ||||||||||||||||| ||||||||||    
T  30352582 agggcaacacggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccatttttggtgtatt 30352653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 48327765 - 48327843
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattatatgca 94  Q
    |||| |||| ||||||||||| || ||||||||| ||||| ||||||| ||||||||||||||||||||||| ||||||    
T  48327765 agggtaacccggtgcactaaaacttccgcatatgtggggttcgggaagaggtcccaccattattggtgtattgtatgca 48327843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 8473622 - 8473700
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgc-ggggtcc-gggaaggggtcccaccattattggtgtattatatgca 94  Q
    ||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||  |||||||||| ||||||    
T  8473622 agggcaacccggtgcactaaagctcccgcatatgcaggggtccggggaaggggtcccaccat--ttggtgtattgtatgca 8473700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 11394985 - 11394925
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||||||||||||||||||| || |||||||| ||||||||||||||||    
T  11394985 agggcaacccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccatt 11394925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 11404712 - 11404652
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||||||||||||||||||| || |||||||| ||||||||||||||||    
T  11404712 agggcaacccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccatt 11404652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 14983967 - 14983907
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||||| |||| |||||||||||||||||| || |||||||||||||||||||||||||    
T  14983967 agggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 14983907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 30639512 - 30639452
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||||||  |||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  30639512 agggcaacccagtgcactaaagctcccgcatatgcagggtccgggaaggggtctcaccatt 30639452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 54175198 - 54175127
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtcc-gggaaggggtcccaccattattggtgtatt 87  Q
    |||||| || ||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||    
T  54175198 agggcagcccggtgcactaaagctcccgcatatgcagggtccggggaaggggtcccaccatt-ttggtgtatt 54175127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 20908638 - 20908708
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||||| ||| ||||||||||||||||||||| || |||| |||||||||||||||||||| ||||||||||    
T  20908638 agggcagccttgtgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatt-ttggtgtatt 20908708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 40553939 - 40553998
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccat 75  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||||||||| ||||||    
T  40553939 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcacaccat 40553998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 25463247 - 25463195
Alignment:
Q  23 cctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  25463247 cctggtgcac-aaagctcccgcatatgcagggtccgggaaggggtcccaccatt 25463195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 56323033 - 56322984
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggg 65  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  56323033 agggcaacccggtgcactaaagctcccgcatatccggggtccgggaaggg 56322984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 5648391 - 5648331
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||||||  ||||||| ||||||||||||| || |||||||||||||||||||||||||    
T  5648391 agggcaacccagtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatt 5648331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 6430628 - 6430688
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||| |||||||||||||||| || |||||||||||| ||||||||||||    
T  6430628 agggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaagtggtcccaccatt 6430688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 9832315 - 9832375
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||| || ||| |||||||| |||||||||||||||||||||||||    
T  9832315 agggcaacccggtgcactagagttcctgcatatgcagggtccgggaaggggtcccaccatt 9832375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 11054150 - 11054210
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||||||||| || |||||    
T  11054150 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccgccatt 11054210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 25388309 - 25388249
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||||||||||||  ||||| || |||||||||||||||||||||||||    
T  25388309 agggcaacccggtgcactaaagctcatgcatacgcagggtccgggaaggggtcccaccatt 25388249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 47444090 - 47444030
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||||||  ||||||| ||||||| |||||||| |||||||||||||||||||||||||    
T  47444090 agggcaacccagtgcactgaagctcctgcatatgcagggtccgggaaggggtcccaccatt 47444030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 47528532 - 47528592
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||| ||||||| ||||| | |||||||||||||||||||||||||    
T  47528532 agggcaacccggtgcactagagctcccacatattcagggtccgggaaggggtcccaccatt 47528592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 48598827 - 48598887
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||| |||||| ||||||||  ||||||||||||||||||||||||    
T  48598827 agggcaacccggtgcactagagctccggcatatgcatggtccgggaaggggtcccaccatt 48598887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 19028044 - 19027986
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccacca 74  Q
    |||||| || |||||||||||||||||||||| | |||||||||||||| |||||||||    
T  19028044 agggcagcccggtgcactaaagctcccgcataagtggggtccgggaaggagtcccacca 19027986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 47482864 - 47482918
Alignment:
Q  28 tgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggt 82  Q
    ||||| |||||||||||||| || ||||||||||||||||||||||||| |||||    
T  47482864 tgcaccaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggt 47482918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 30581481 - 30581537
Alignment:
Q  30 cactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||||||  ||||||| ||||||||||||||||||||||||| ||||||||||    
T  30581481 cactaaagctcctacatatgcagggtccgggaaggggtcccaccatt-ttggtgtatt 30581537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 32478794 - 32478853
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||| ||| ||||||| |||||||||||||| || |||||||||||||||||||||||||    
T  32478794 agggccacccggtgcac-aaagctcccgcatacgctgggtccgggaaggggtcccaccatt 32478853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 35532125 - 35532077
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaagg 64  Q
    ||||||||| |||||||||||||||||||||| || |||||||||||||    
T  35532125 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaagg 35532077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 35567303 - 35567243
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||| || |||||||||||||||||||| | || |||| ||||||||||||||||||||    
T  35567303 agggcagcccggtgcactaaagctcccgcagacgcagggttcgggaaggggtcccaccatt 35567243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 40915961 - 40915901
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||| | |||||||| ||||||||||||| || |||||||||||||| ||||||||||    
T  40915961 agggcaatccggtgcactgaagctcccgcatacgcagggtccgggaagggctcccaccatt 40915901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 17043398 - 17043456
Alignment:
Q  17 gggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||| ||||||||| ||||||||| |||||||| ||||| |||||||||||||||||||    
T  17043398 gggcagcctggtgca-taaagctccagcatatgcagggtctgggaaggggtcccaccatt 17043456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 44718700 - 44718641
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccat 75  Q
    ||||||||| ||||  |||||||||||||||| || ||||| ||||||||||||||||||    
T  44718700 agggcaacccggtgtgctaaagctcccgcatacgcagggtctgggaaggggtcccaccat 44718641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 49938611 - 49938665
Alignment:
Q  32 ctaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||| ||||||||||    
T  49938611 ctaaagctcccgcatatgcagggtatgggaaggggtcccaccatt-ttggtgtatt 49938665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 50555658 - 50555721
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattatt 79  Q
    |||||| || ||||||||||| |||| ||||| || |||||||||||||||| |||||||||||    
T  50555658 agggcagcccggtgcactaaaactcctgcatacgcagggtccgggaaggggttccaccattatt 50555721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 28494274 - 28494224
Alignment:
Q  26 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||||||||| || || |||||||||||||||||||    
T  28494274 ggtgcactagagctcccgcatatgcaggatctgggaaggggtcccaccatt 28494224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 51865050 - 51865100
Alignment:
Q  26 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||| ||||||||||||||| || ||||||||||||||| |||||||||    
T  51865050 ggtgcaataaagctcccgcatacgcagggtccgggaaggggccccaccatt 51865100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 7909282 - 7909343
Alignment:
Q  16 agggcaacctggtgcactaaagctccc-gcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| | ||||||||||||||| ||||| || |||| ||||||||||||||||||||    
T  7909282 agggcaacccgatgcactaaagctccccgcatacgcagggttcgggaaggggtcccaccatt 7909343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 9987846 - 9987912
Alignment:
Q  26 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattatatgca 94  Q
    |||||| ||||||||||||||||||  ||||  |||||||||||||||||  |||||||||| ||||||    
T  9987846 ggtgcattaaagctcccgcatatgcaaggtcaaggaaggggtcccaccat--ttggtgtattgtatgca 9987912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 21489210 - 21489161
Alignment:
Q  27 gtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||| |||||||||||||| || |||| ||||||||||||||||||||    
T  21489210 gtgcacgaaagctcccgcatacgcagggttcgggaaggggtcccaccatt 21489161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 94
Target Start/End: Complemental strand, 16494338 - 16494274
Alignment:
Q  30 cactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattatatgca 94  Q
    |||||||||| |||||||  | ||||| ||||| ||||||||||||| |||||||||| ||||||    
T  16494338 cactaaagcttccgcatacacagggtctgggaaagggtcccaccatttttggtgtattgtatgca 16494274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 39029078 - 39029122
Alignment:
Q  32 ctaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  39029078 ctaaagctcccgcatatgcagggtccggaaagtggtcccaccatt 39029122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 55830723 - 55830783
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||| |||||||||||||||||| |||||| ||  ||||||||| ||||| ||||||||    
T  55830723 agggcatcctggtgcactaaagctctcgcatacgcaaggtccgggatggggttccaccatt 55830783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 5306662 - 5306726
Alignment:
Q  16 agggcaacctggtgcactaaagctcccg----catatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||| |||||||||||    |||| || |||||||||||||||||||||||||    
T  5306662 agggcaacccggtgcattaaagctcccgtccacatacgcagggtccgggaaggggtcccaccatt 5306726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 8820629 - 8820578
Alignment:
Q  28 tgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattatt 79  Q
    ||||||||| ||| |||||| || ||||| ||||||||||||||||||||||    
T  8820629 tgcactaaaactctcgcatacgcagggtctgggaaggggtcccaccattatt 8820578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 36816386 - 36816456
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| ||| ||||||||||||||||||  | |||||| |||||| |||||||| || ||||||||||    
T  36816386 agggcaacccggtacactaaagctcccgcatacacagggtccaggaaggagtcccacc-tttttggtgtatt 36816456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 54967151 - 54967093
Alignment:
Q  17 gggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||| || ||||||| ||||||||||||||||  |||| ||||||||||||||||||||    
T  54967151 gggcagcccggtgcac-aaagctcccgcatatgtagggtacgggaaggggtcccaccatt 54967093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 10660538 - 10660461
Alignment:
Q  17 gggcaacctggtgcact-aaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattatatgca 94  Q
    |||||||| | |||||| |||||||||||||| || || ||  |||||||||| |||||||||||||||||| ||||||    
T  10660538 gggcaacccgatgcacttaaagctcccgcatacgcagg-tcttggaaggggtctcaccattattggtgtattgtatgca 10660461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 10874683 - 10874606
Alignment:
Q  17 gggcaacctggtgcact-aaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattatatgca 94  Q
    |||||||| | |||||| |||||||||||||| || || ||  |||||||||| |||||||||||||||||| ||||||    
T  10874683 gggcaacccgatgcacttaaagctcccgcatacgcagg-tcttggaaggggtctcaccattattggtgtattgtatgca 10874606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 39077800 - 39077858
Alignment:
Q  18 ggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||| ||||||||| ||||||||||||||| |||||||| |||  ||| |||||||    
T  39077800 ggcaacccggtgcactagagctcccgcatatgcagggtccggaaagatgtctcaccatt 39077858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 49796911 - 49796870
Alignment:
Q  35 aagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||||||| || |||| ||||||||||||||||||||    
T  49796911 aagctcccgcatacgcagggttcgggaaggggtcccaccatt 49796870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 2813261 - 2813189
Alignment:
Q  16 agggcaacctggtgcact-aaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||| | |||||||| |||||||||||||| ||   || |||||| ||||||||||||||||| ||||||    
T  2813261 agggcaatccggtgcacttaaagctcccgcatacgcatcgttcgggaaagggtcccaccattattgatgtatt 2813189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 37038132 - 37038172
Alignment:
Q  23 cctggtgcactaaagctcccgcatatgcggggtccgggaag 63  Q
    ||||||||||||||||||||||||| || |||| |||||||    
T  37038132 cctggtgcactaaagctcccgcatacgcagggtacgggaag 37038172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 37494972 - 37494924
Alignment:
Q  28 tgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||||||||||| ||||| || |||||| | ||||||||||||||||    
T  37494972 tgcactaaagctcctgcatacgcagggtcccgaaaggggtcccaccatt 37494924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 55766468 - 55766528
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||| || ||||||||||||||| |||||| ||  ||||||||| ||||| ||||||||    
T  55766468 agggcatcccggtgcactaaagctctcgcatacgcaaggtccgggatggggttccaccatt 55766528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 4e-28; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 6760957 - 6760886
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  6760957 agggcaacccggtgcactaaagctcccgcatatgcggggtccgagaaggggtcccaccattattggtgtatt 6760886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 7136529 - 7136600
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7136529 agggtaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 7136600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 20870058 - 20869987
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20870058 agggcaacccggtgcactaaagctcccgcatatgcggggtcctggaaggggtcccaccattattggtgtatt 20869987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 16225150 - 16225083
Alignment:
Q  20 caacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  16225150 caacccggtgcactaaagctcccgcatatgcggggtccgggaagggatcccaccattattggtgtatt 16225083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 25250657 - 25250586
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25250657 agggcaacccggtgcactaaatctcccgcatatgcggggttcgggaaggggtcccaccattattggtgtatt 25250586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 26954268 - 26954197
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||||||||  ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  26954268 agggcaacccagtgcactaaagctcccgcatatgcgaggtctgggaaggggtcccaccattattggtgtatt 26954197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 39460996 - 39461067
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||    
T  39460996 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtctcaccattattggtgtatt 39461067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 20284075 - 20284142
Alignment:
Q  20 caacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||| ||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||    
T  20284075 caacccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtatt 20284142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 21070703 - 21070770
Alignment:
Q  20 caacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||| ||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||    
T  21070703 caacccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtatt 21070770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 8897766 - 8897826
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  8897766 agggcaaccgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccaccatt 8897826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 30454099 - 30454159
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  30454099 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatt 30454159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 12626023 - 12625947
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattatatgca 94  Q
    ||||||||| |||||||||||||||||||||| || |||||||||| |||||||||||||  |||||||||| ||||||    
T  12626023 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggagggggtcccaccat--ttggtgtattgtatgca 12625947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 29877229 - 29877167
Alignment:
Q  14 atagggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||||| ||||||||||||| ||||||||||| || |||||||||||||||||||||||||    
T  29877229 atagggcagcctggtgcactaacgctcccgcatacgcagggtccgggaaggggtcccaccatt 29877167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 12670252 - 12670312
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||| |||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  12670252 agggtaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatt 12670312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 26102650 - 26102590
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||| |||||||||||| || |||||||||||||||||||||||||    
T  26102650 agggcaacccggtgcactagagctcccgcataagcagggtccgggaaggggtcccaccatt 26102590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 28817628 - 28817688
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| | |||||||||||||||||||| || |||||||||||||||||||||||||    
T  28817628 agggcaacccgatgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 28817688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 35261812 - 35261752
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||||||||||||||||||| || |||||| ||||||||||||||||||    
T  35261812 agggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatt 35261752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 36720929 - 36720869
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||||||||||| ||||||| || |||||||||||||||||||||||||    
T  36720929 agggcaaccgggtgcactaaagcttccgcatacgcagggtccgggaaggggtcccaccatt 36720869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 2626655 - 2626595
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||| |||||||||| |||||||||||||||| ||||| |||||||||||||| ||||    
T  2626655 agggcaatctggtgcactgaagctcccgcatatgcagggtctgggaaggggtcccatcatt 2626595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 13160834 - 13160774
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| || ||||| ||||||||||||| || |||||||||||||||||||||||||    
T  13160834 agggcaacccggcgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatt 13160774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 17823709 - 17823649
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||||||||||||| |||||||| |||| ||||||||||| ||||||||    
T  17823709 agggcaacccggtgcactaaagctcctgcatatgcagggttcgggaaggggttccaccatt 17823649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 28407536 - 28407476
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||| ||||||||||||||| |  |||||||||||||||||||||||||    
T  28407536 agggcaacccggtgcagtaaagctcccgcatacgtagggtccgggaaggggtcccaccatt 28407476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 44530278 - 44530222
Alignment:
Q  20 caacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||| |||||||||||||||||||||| || |||||| ||||||||||||||||||    
T  44530278 caacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatt 44530222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 45071397 - 45071337
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||||| ||||||||||||| ||  ||||||||||||||||||||||||    
T  45071397 agggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatt 45071337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 16013585 - 16013518
Alignment:
Q  20 caacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||| |||||||||||||||||||||| || ||||| ||||||||||| ||||||| || |||||||    
T  16013585 caacccggtgcactaaagctcccgcataggcagggtctgggaaggggtcgcaccatttttagtgtatt 16013518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 27508039 - 27507985
Alignment:
Q  20 caacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccacca 74  Q
    ||||| |||||||||||||||||||||| || |||| ||||||||||||||||||    
T  27508039 caacccggtgcactaaagctcccgcatacgcagggttcgggaaggggtcccacca 27507985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 19729462 - 19729413
Alignment:
Q  27 gtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||||| |||||||| |||||| |||||||||||||||||||||||||    
T  19729462 gtgcactagagctcccgtatatgcagggtccgggaaggggtcccaccatt 19729413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 10857962 - 10857893
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| |||||||||||||||||||||| ||  ||||| ||||| ||||||||||  |||||||||||    
T  10857962 agggcaacccggtgcactaaagctcccgcatacgcaaggtccaggaagtggtcccacca--attggtgtatt 10857893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 17250888 - 17250948
Alignment:
Q  27 gtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||||||||||||||  |||| || |||| |||||| ||||||||||||||||||||||||    
T  17250888 gtgcactaaagctccttcatacgcagggttcgggaaagggtcccaccattattggtgtatt 17250948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 35107313 - 35107373
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||||||||||| |||||||  | | |||||||||||||||||||||||    
T  35107313 agggcaacccggtgcactaaagcttccgcatacacagcgtccgggaaggggtcccaccatt 35107373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 44781517 - 44781577
Alignment:
Q  27 gtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||||||||||||||| || ||||| |||| ||||||||| |||| ||||||||||    
T  44781517 gtgcactaaagctcccgcatacgcagggtctgggacggggtcccaacatttttggtgtatt 44781577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 27468094 - 27468141
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaag 63  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||||    
T  27468094 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaag 27468141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 29521690 - 29521747
Alignment:
Q  19 gcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||| |||||||||||||||||||||| || ||||| |||| ||| ||||||||||    
T  29521690 gcaacccggtgcactaaagctcccgcatacgcagggtctgggatgggttcccaccatt 29521747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 5135292 - 5135351
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||| || ||||||| |||||||| ||||| || |||||||||||||||||||||||||    
T  5135292 agggcagcccggtgcac-aaagctcctgcatacgcagggtccgggaaggggtcccaccatt 5135351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 18164764 - 18164808
Alignment:
Q  18 ggcaacctggtgcactaaagctcccgcatatgcggggtccgggaa 62  Q
    ||||||| |||||||||||||||||||||| || |||||||||||    
T  18164764 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 18164808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 36486568 - 36486627
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccat 75  Q
    ||||||||| || ||||||||||||| ||||| ||  ||||||||||| |||||||||||    
T  36486568 agggcaacccggggcactaaagctcctgcatacgcaaggtccgggaagaggtcccaccat 36486627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 8483950 - 8484009
Alignment:
Q  26 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||| |||||||||||||||| || ||||| |||| ||||||||||||  |||||||||||    
T  8483950 ggtgccctaaagctcccgcatacgcagggtctgggatggggtcccacca--attggtgtatt 8484009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 76
Target Start/End: Original strand, 24365079 - 24365121
Alignment:
Q  34 aaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||| || |||||||||||||||||||||||||    
T  24365079 aaagctcccacatacgcagggtccgggaaggggtcccaccatt 24365121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 20869523 - 20869559
Alignment:
Q  37 gctcccgcatatgcggggtccgggaaggggtcccacc 73  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  20869523 gctcccgcatatgcagggtccgggaaggggtctcacc 20869559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 31457305 - 31457245
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||| | ||||||||| |||||||||||| || ||||  |||||||||||| ||||||    
T  31457305 agggcaatccggtgcactagagctcccgcatacgcagggtttgggaaggggtcctaccatt 31457245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 4e-28; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 4619106 - 4619177
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  4619106 agggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 4619177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 13801769 - 13801840
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  13801769 agggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 13801840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 20135739 - 20135668
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20135739 agggcaacccggtgcactgaagctcctgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 20135668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 38879716 - 38879645
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  38879716 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtatt 38879645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 25622593 - 25622524
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgta 85  Q
    ||||||| | |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  25622593 agggcaatccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgta 25622524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 12006330 - 12006406
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattatatg 92  Q
    ||||||||  |||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||| ||||    
T  12006330 agggcaacacggtgcactaaagctcccgcataggcagggtctgggaaggggtcccaccattattggtgtattgtatg 12006406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 41014451 - 41014391
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41014451 agggcaacccggtgcactaaagctcccgcatatgcggggtccaggaaggggtcccaccatt 41014391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 16957447 - 16957387
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||    
T  16957447 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 16957387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 32703555 - 32703495
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  32703555 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatt 32703495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 43334337 - 43334267
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| |||||||||||||||||||||  || ||||||||||||||||||||||||| ||||||||||    
T  43334337 agggcaacccggtgcactaaagctcccgcatc-gcagggtccgggaaggggtcccaccatttttggtgtatt 43334267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 16028626 - 16028683
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccacc 73  Q
    ||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  16028626 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacc 16028683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 8169986 - 8170046
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||||| || ||||||||||||| |||||||||||||||||||||||||    
T  8169986 agggcaacccggtgcactgaaactcccgcatatgcagggtccgggaaggggtcccaccatt 8170046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 24449023 - 24448963
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||||||||||||| ||||| || |||||||||||||||||||||||||    
T  24449023 agggcaacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccatt 24448963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 34154816 - 34154876
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||| |||| |||||||||| |||||||||||||||||||||||||    
T  34154816 agggcaacccggtgcactagagctaccgcatatgcagggtccgggaaggggtcccaccatt 34154876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 7368528 - 7368460
Alignment:
Q  17 gggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||||||| ||||||||| ||||||| ||||||| |||||||||||||||||||||||  |||||||||||    
T  7368528 gggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccacca--attggtgtatt 7368460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 27328875 - 27328816
Alignment:
Q  28 tgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||| ||||||||||||||| || |||| |||||||||||||||||||||||||||||||    
T  27328875 tgcattaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtatt 27328816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 30877566 - 30877628
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattat 78  Q
    ||||||||| ||||||||| ||||||| ||||||| |||||||||||||||||||||| ||||    
T  30877566 agggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccacctttat 30877628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 35710444 - 35710384
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||| |||||||||||||||  | ||||||||||||||||||||||    
T  35710444 agggcaacccggtgcactagagctcccgcatatgcatgttccgggaaggggtcccaccatt 35710384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 10306493 - 10306546
Alignment:
Q  33 taaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||||||||| || ||||||||||||||||||||||||| ||||||||||    
T  10306493 taaagctcccgcatacgcagggtccgggaaggggtcccaccatt-ttggtgtatt 10306546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 43574729 - 43574679
Alignment:
Q  26 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||| |||||||||||||||| || |||||||||||||||||||||||||    
T  43574729 ggtgctctaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 43574679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 1565564 - 1565505
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||||||| |||||| ||||||| ||||||||||||||||||| |||||    
T  1565564 agggcaacccggtgcactaa-gctcccacatatgcagggtccgggaaggggtcccgccatt 1565505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 7097762 - 7097822
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||| | ||||||||||||||||||||||| || |||| |||||||||||| |||||||    
T  7097762 agggcagcatggtgcactaaagctcccgcatacgcagggttcgggaaggggtctcaccatt 7097822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 29297914 - 29297862
Alignment:
Q  26 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattat 78  Q
    ||||||||||||| |||| || |||||||||||||||||| ||||||||||||    
T  29297914 ggtgcactaaagcacccgtatttgcggggtccgggaagggatcccaccattat 29297862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 39801647 - 39801591
Alignment:
Q  18 ggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccacca 74  Q
    ||||||| |||||||||||||||||||||| |  ||||| |||||||||||||||||    
T  39801647 ggcaacccggtgcactaaagctcccgcatacgtagggtctgggaaggggtcccacca 39801591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 4654426 - 4654477
Alignment:
Q  25 tggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||||||||||||||||||||||| |||| || |||||| ||||||||||    
T  4654426 tggtgcactaaagctcccgcatatgcagggttcgagaagggatcccaccatt 4654477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 12575662 - 12575732
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||||| || ||||||| |||||||| ||||| || |||||| |||||||||||||||||| ||||||||||    
T  12575662 agggcagcccggtgcaccaaagctcctgcatacgcagggtccaggaaggggtcccaccatt-ttggtgtatt 12575732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 21784335 - 21784394
Alignment:
Q  17 gggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||||  ||||||||||| |||||||||| || |||||||| ||||||||||||||||    
T  21784335 gggcaactcggtgcactaaacctcccgcatacgcagggtccggaaaggggtcccaccatt 21784394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 10943847 - 10943900
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtccc 70  Q
    |||||| || ||||||||||||||||||||| ||| |||||||||||||||||||    
T  10943847 agggcagcccggtgcactaaagctcccgcat-tgcagggtccgggaaggggtccc 10943900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 11657701 - 11657778
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattatatgca 94  Q
    |||||| || |||| ||||||| |||||| | ||| |||| |||||||||||||||||||| |||||||||| ||||||    
T  11657701 agggcagcccggtgaactaaagttcccgcgtgtgcagggttcgggaaggggtcccaccatt-ttggtgtattgtatgca 11657778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 58
Target Start/End: Complemental strand, 19438799 - 19438757
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccg 58  Q
    ||||||||||||||||||| ||||||||||||||| |||||||    
T  19438799 agggcaacctggtgcactagagctcccgcatatgcagggtccg 19438757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 22861681 - 22861731
Alignment:
Q  26 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||||||||| |||| || |||||||||||||||||    
T  22861681 ggtgcactagagctcccgcatatgcagggttcgagaaggggtcccaccatt 22861731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 19142956 - 19143005
Alignment:
Q  27 gtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||||||| |||||||||| ||  ||||||||||||||||||||||||    
T  19142956 gtgcactaaatctcccgcatacgcatggtccgggaaggggtcccaccatt 19143005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 32354260 - 32354211
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggg 65  Q
    ||||||||| ||||||||||||||||||||||  | ||||||||||||||    
T  32354260 agggcaacccggtgcactaaagctcccgcatacacagggtccgggaaggg 32354211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 3771472 - 3771403
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||||| || ||||||||||||||||| ||||  | | |||||||||||||||||||||  |||||||||||    
T  3771472 agggcagcccggtgcactaaagctcccacatacacagagtccgggaaggggtcccacca--attggtgtatt 3771403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 16880649 - 16880709
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||| |||| |||||||||||||||||||||| ||  ||||||||||| |||| |||||||    
T  16880649 agggaaacccggtgcactaaagctcccgcatacgcatggtccgggaagtggtcacaccatt 16880709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 28516435 - 28516495
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||||||| |||||||||||| ||||  || ||||| ||||| |||||||||||||    
T  28516435 agggcaacctggtccactaaagctcctgcatgcgcagggtctgggaatgggtcccaccatt 28516495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 208939 - 208999
Alignment:
Q  26 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||||||||||||||  |||||  | |||||| |||||||||||||||||| ||||||||||    
T  208939 ggtgcactaaagctcttgcatacccagggtccaggaaggggtcccaccatt-ttggtgtatt 208999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 12477132 - 12477192
Alignment:
Q  26 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||||||||||||||  ||||| || |  |||||||||||||||||||||| ||||||||||    
T  12477132 ggtgcactaaagctcttgcatacgcagaatccgggaaggggtcccaccatt-ttggtgtatt 12477192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 1405320 - 1405260
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||| | |||| |||| ||||||||||||||| |||| | |||| |||||||||||||    
T  1405320 agggcaatccggtgtactagagctcccgcatatgcagggttcaggaaagggtcccaccatt 1405260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 21542489 - 21542529
Alignment:
Q  36 agctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||||||||| || | |||||||||||||||||||||||    
T  21542489 agctcccgcatacgcagagtccgggaaggggtcccaccatt 21542529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 22187420 - 22187368
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtc 68  Q
    ||||||||||| |||||||||||||| |||||||  ||||  |||||||||||    
T  22187420 agggcaacctgatgcactaaagctcctgcatatgtagggtttgggaaggggtc 22187368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 29334529 - 29334469
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||| || |||||| ||||| |||| |||| || ||||||||||| |||||||||||||    
T  29334529 agggcagcccggtgcattaaagatcccacatacgcagggtccgggaatgggtcccaccatt 29334469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 39079764 - 39079823
Alignment:
Q  27 gtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||||||||| |||||| |||  |  |||||||||||||||||||||||| ||||||||||    
T  39079764 gtgcactaaaactcccgtatacacatggtccgggaaggggtcccaccatt-ttggtgtatt 39079823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 4e-28; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 20004092 - 20004163
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  20004092 agggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtgtatt 20004163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 30395728 - 30395799
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30395728 agggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 30395799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 50606559 - 50606488
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  50606559 agggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccatttttggtgtatt 50606488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 10668383 - 10668312
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| |||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||    
T  10668383 agggcaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattattggtgtatt 10668312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 35005281 - 35005203
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattatatgca 94  Q
    ||||||||| ||||||||||||| |||||||| || ||||||||||||||||||||||||| |||||||||| ||||||    
T  35005281 agggcaacccggtgcactaaagcgcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtatgca 35005203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 4349794 - 4349734
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||    
T  4349794 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 4349734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 18944802 - 18944730
Alignment:
Q  16 agggcaacctggtgcactaaa-gctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| ||||||||||| ||||||||||| || ||||||||||||||||||||||||| ||||||||||    
T  18944802 agggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattgttggtgtatt 18944730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 34725100 - 34725160
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  34725100 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatt 34725160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 19932753 - 19932826
Alignment:
Q  14 atagggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||||||||||||||||||||| | ||  ||||| || ||||||||||||||||||||||||| ||||||||||    
T  19932753 atagggcaacctggtgcactaatgatcttgcatacgcagggtccgggaaggggtcccaccatttttggtgtatt 19932826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 14617194 - 14617134
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||| |||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  14617194 agggtaacccggtgcactaaagctcccgcatatgcagggtccgggaagggatcccaccatt 14617134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 19414593 - 19414533
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||| ||||||||||||||| |||| ||||||||||||||||||||    
T  19414593 agggcaacccggtgcactagagctcccgcatatgcagggtacgggaaggggtcccaccatt 19414533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 19701720 - 19701657
Alignment:
Q  23 cctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||||||||||||||||||| || ||||||||||||||| ||||||||| ||||||||||    
T  19701720 cctggtgcactaaagctcccgcatacgcagggtccgggaaggggccccaccatt-ttggtgtatt 19701657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 27474436 - 27474376
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||| | |||||||||||||||||||||| || |||||||||||||||||||||||||    
T  27474436 agggcaatccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 27474376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 35253189 - 35253249
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||| | ||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  35253189 agggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatt 35253249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 46247955 - 46248015
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||| |||||||||||||||||| || |||||||||||||||||||||||||    
T  46247955 agggcaacccggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 46248015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 18741959 - 18742030
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||| |||| ||||||||||||||| |||||| || ||||| ||||||||||||||||||| ||||||||||    
T  18741959 agggaaacccggtgcactaaagctctcgcatacgcagggtctgggaaggggtcccaccatttttggtgtatt 18742030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 27201793 - 27201734
Alignment:
Q  28 tgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||||| ||||||||||    
T  27201793 tgcactaaagctcccgcatacgcaaggtccgggaaggggtcccaccatttttggtgtatt 27201734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 42304209 - 42304280
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||| | ||||||||||||||||| |||| || ||||||||||||||||||||||||| || |||||||    
T  42304209 agggcaatccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattttttgtgtatt 42304280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 45402251 - 45402192
Alignment:
Q  17 gggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||||| |||||||||||||||||||||| || ||||| |||||||||||||||||||    
T  45402251 gggcaacccggtgcactaaagctcccgcatacgcagggtctgggaaggggtcccaccatt 45402192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 46991959 - 46991900
Alignment:
Q  17 gggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||||| ||||||||||||||||| |||| || |||||||||||||||||||||||||    
T  46991959 gggcaacccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccatt 46991900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 4587568 - 4587625
Alignment:
Q  19 gcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||| |||||||| ||||||||||||| || |||||||||||||||||||||||||    
T  4587568 gcaacccggtgcactgaagctcccgcataggcagggtccgggaaggggtcccaccatt 4587625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 45264411 - 45264471
Alignment:
Q  26 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||||||||||||||||||| ||||| | ||||||||||||||||| ||||||||||    
T  45264411 ggtgcactaaagctcccgcatatgcagggtctgagaaggggtcccaccatt-ttggtgtatt 45264471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 45812541 - 45812615
Alignment:
Q  18 ggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattatatgca 94  Q
    ||||||| ||||||||| ||||||||||||||| ||||  ||||||||||||||||||  |||||||||| ||||||    
T  45812541 ggcaacccggtgcactagagctcccgcatatgcagggtttgggaaggggtcccaccat--ttggtgtattgtatgca 45812615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 9939620 - 9939548
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaa-ggggtcccaccattattggtgtatt 87  Q
    |||| |||| |||||||||||||||||||||| || ||||||| ||| |||||||||||||| ||||||||||    
T  9939620 agggtaacccggtgcactaaagctcccgcatacgcagggtccgagaagggggtcccaccatttttggtgtatt 9939548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 31382216 - 31382276
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||| || |||||||||||||||||| |||||| ||||||||||||||||||    
T  31382216 agggcaacccggtacagtaaagctcccgcatatgcagggtccaggaaggggtcccaccatt 31382276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 32632559 - 32632619
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||| ||||||||||||| |||||||||||||||| ||||  |||||||||||||||||||    
T  32632559 agggaaacctggtgcactcaagctcccgcatatgcagggtttgggaaggggtcccaccatt 32632619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 38478284 - 38478344
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||| ||||||||||||||| ||||||| |||||||| ||||||||    
T  38478284 agggcaacccggtgcactagagctcccgcatatgcagggtccgagaaggggttccaccatt 38478344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 47214657 - 47214605
Alignment:
Q  24 ctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||||| ||||||||||||||| ||||| |||||||||||||||||||    
T  47214657 ctggtgcactagagctcccgcatatgcagggtctgggaaggggtcccaccatt 47214605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 10378738 - 10378797
Alignment:
Q  17 gggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||| || ||||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  10378738 gggcagcccggtgcactaaagctcccgcatatgcagggtccaagaaggggtcccaccatt 10378797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 6925246 - 6925196
Alignment:
Q  26 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||||||||||||||||||| || ||| |||||||||||||||||||||    
T  6925246 ggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccatt 6925196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 22325049 - 22324972
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattatatgca 94  Q
    |||||| ||||||||||||||||||||||||| || |||| ||||| ||||  |||||||| |||||||||| ||||||    
T  22325049 agggcagcctggtgcactaaagctcccgcatacgcagggt-cgggacggggctccaccatttttggtgtattgtatgca 22324972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 12126850 - 12126895
Alignment:
Q  27 gtgcactaaagctcccgcatatgcggggtccgggaaggggtcccac 72  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||    
T  12126850 gtgcactacagctcccgcatatgcagggtccgggaaggggtcccac 12126895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 16120872 - 16120819
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcc 69  Q
    |||||| ||||||||| |||||||||||||||||| ||| ||||||||||||||    
T  16120872 agggcagcctggtgcattaaagctcccgcatatgcaggggccgggaaggggtcc 16120819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 1517313 - 1517382
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| |||||||||||||||| ||||| || ||||| | |||||||||||||||  |||||||||||    
T  1517313 agggcaacccggtgcactaaagctcctgcatacgcagggtctgagaaggggtcccacca--attggtgtatt 1517382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 23796621 - 23796561
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||| || |||||||||||||||| |||||||| ||||| ||||||||||| |||||||    
T  23796621 agggcagcccggtgcactaaagctccagcatatgcagggtctgggaaggggtctcaccatt 23796561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 33594144 - 33594191
Alignment:
Q  27 gtgcactaaagctcccgcatatgcggggtccgggaaggggtcccacca 74  Q
    ||||||||||||||||||||| || ||||| |||||||||||||||||    
T  33594144 gtgcactaaagctcccgcatacgcagggtctgggaaggggtcccacca 33594191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 30555261 - 30555211
Alignment:
Q  26 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||||||||| |||||| || ||||||| |||||||||||||||||    
T  30555261 ggtgcactaaagctctcgcatacgcagggtccgtgaaggggtcccaccatt 30555211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 35117777 - 35117839
Alignment:
Q  26 ggtgcactaaagctcccgcat-atgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||||||||||||||| |||| | || |||||||||||||||||||| |||| ||||||||||    
T  35117777 ggtgcactaaagctcctgcattacgcagggtccgggaaggggtcccatcatttttggtgtatt 35117839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 11596650 - 11596596
Alignment:
Q  34 aaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattata 90  Q
    |||||||||||||| || |||||| |||||||||||||||||  |||||||||||||    
T  11596650 aaagctcccgcatacgcagggtccaggaaggggtcccaccat--ttggtgtattata 11596596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 19386581 - 19386626
Alignment:
Q  19 gcaacctggtgcactaaagctcccgcatatgcggggtccgggaagg 64  Q
    |||||||||| ||||| ||||||||||||||| |||||||||||||    
T  19386581 gcaacctggttcactagagctcccgcatatgcagggtccgggaagg 19386626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 15511149 - 15511220
Alignment:
Q  15 tagggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||| || ||||||||||||||| | |||| || |||||| ||||||||| |||||||| ||||||||||    
T  15511149 tagggcagcccggtgcactaaagctcacacatacgcagggtccaggaaggggtaccaccatt-ttggtgtatt 15511220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 23768334 - 23768382
Alignment:
Q  28 tgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||||||||||||||||| || ||||| ||||||| |||||||||||    
T  23768334 tgcactaaagctcccgcatacgcagggtctgggaaggtgtcccaccatt 23768382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 30682963 - 30682908
Alignment:
Q  20 caacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||| |||||||| |||||||||||||| ||  ||||||||||||||||||||||||    
T  30682963 caacttggtgcac-aaagctcccgcatacgcacggtccgggaaggggtcccaccatt 30682908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 43768295 - 43768226
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||||| || |||||| ||||||||||| ||| || ||||| |||||||||||||||||  |||||||||||    
T  43768295 agggcagcccggtgcattaaagctcccgtatacgcagggtctgggaaggggtcccacca--attggtgtatt 43768226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 1693285 - 1693222
Alignment:
Q  14 atagggcaacctggtgcactaaa-gctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||| ||| |||||||||||||| ||||| |||| ||| ||||| |||||||||||||||||||    
T  1693285 atagcgcatcctggtgcactaaaagctcctgcatctgccgggtctgggaaggggtcccaccatt 1693222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 20169109 - 20169148
Alignment:
Q  34 aaagctcccgcatatgcggggtccgggaaggggtcccacc 73  Q
    ||||||||||||||||| ||||||||||||| ||||||||    
T  20169109 aaagctcccgcatatgcagggtccgggaaggagtcccacc 20169148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 76
Target Start/End: Complemental strand, 15505702 - 15505660
Alignment:
Q  34 aaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||||||||||| || |||| ||||||||||||||||||||    
T  15505702 aaagctcccgcatacgcagggttcgggaaggggtcccaccatt 15505660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 18724557 - 18724602
Alignment:
Q  25 tggtgcactaaagctcccgcatatgcggggtccgggaaggggtccca 71  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||||    
T  18724557 tggtgcac-aaagctcccgcatatgtagggtccgggaaggggtccca 18724602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 28894561 - 28894611
Alignment:
Q  17 gggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggt 67  Q
    ||||| |||||||||||||||||| ||||||||| |||||  |||||||||    
T  28894561 gggcagcctggtgcactaaagctctcgcatatgcagggtctaggaaggggt 28894611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 31442396 - 31442461
Alignment:
Q  21 aacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||| ||||||| ||||||||| ||||  | | ||||||||||||||||||||||| ||||||||||    
T  31442396 aacccggtgcaccaaagctcccacatacacagtgtccgggaaggggtcccaccatt-ttggtgtatt 31442461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 2435798 - 2435858
Alignment:
Q  26 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||||||||||||||||||||  |  |||| ||| |||||||||||||||| ||||||||||    
T  2435798 ggtgcactaaagctcccgcatgcggagggtacggaaaggggtcccaccatt-ttggtgtatt 2435858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 35019375 - 35019310
Alignment:
Q  26 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattatatgca 94  Q
    ||||||||||||||| |||||| || ||||| ||| |||||||||||||  ||||||||||| ||||||    
T  35019375 ggtgcactaaagctctcgcatacgcagggtctggg-aggggtcccacca--attggtgtattgtatgca 35019310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 6983813 - 6983873
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||| || ||||||| |||||||| || || || |||||||| ||||||||||||||||    
T  6983813 agggcagcccggtgcaccaaagctcctgcctacgcagggtccggaaaggggtcccaccatt 6983873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 8197199 - 8197139
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||| ||||||||||||  |||| || ||||||| |||||||||| ||||||    
T  8197199 agggcaacccggtacactaaagctccaacatacgcagggtccgagaaggggtcctaccatt 8197139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 41319808 - 41319868
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||||||  ||||||| || ||||||||||||  |||| ||||||||||||||| ||||    
T  41319808 agggcaacccagtgcactgaaactcccgcatatgaagggttcgggaaggggtcccatcatt 41319868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 1e-25; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 5841163 - 5841092
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5841163 agggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattgatgtatt 5841092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 14530453 - 14530382
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  14530453 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtatt 14530382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 10543833 - 10543762
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||    
T  10543833 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtatt 10543762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 14444861 - 14444801
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  14444861 agggcaacctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 14444801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 9671312 - 9671252
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||    
T  9671312 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 9671252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 10546296 - 10546236
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||    
T  10546296 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 10546236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 21779263 - 21779323
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  21779263 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatt 21779323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 41409995 - 41409936
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccat 75  Q
    ||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  41409995 agggcaacccggtgcactgaagctcccgcatatgcagggtccgggaaggggtcccaccat 41409936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 34080234 - 34080176
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccacca 74  Q
    ||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  34080234 agggcaacccggtgcactaaaactcccgcatatgcagggtccgggaaggggtcccacca 34080176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 3633710 - 3633762
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtc 68  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  3633710 agggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtc 3633762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 8455318 - 8455378
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||||||||||||| ||||| || |||||||||||||||||||||||||    
T  8455318 agggcaacccggtgcactaaagctccggcatacgcagggtccgggaaggggtcccaccatt 8455378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 23488613 - 23488545
Alignment:
Q  19 gcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    |||||| ||||||||||||||| |||||| || ||||||||||||||||||||||||| || |||||||    
T  23488613 gcaacccggtgcactaaagctctcgcatacgcagggtccgggaaggggtcccaccattttttgtgtatt 23488545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 40579751 - 40579810
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccat 75  Q
    ||||||||| ||||||||||||||||||||||  | ||||||||||||||||||||||||    
T  40579751 agggcaacccggtgcactaaagctcccgcatactcagggtccgggaaggggtcccaccat 40579810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 8576028 - 8575975
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcc 69  Q
    ||||||||||||||||||||||||||| |||| || ||||||||||||||||||    
T  8576028 agggcaacctggtgcactaaagctcccacatacgcagggtccgggaaggggtcc 8575975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 14544199 - 14544139
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||||| ||||||||||||||||||||||| || |||||| ||||||||||| ||||||    
T  14544199 agggcaacttggtgcactaaagctcccgcatacgcagggtcccggaaggggtccgaccatt 14544139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 23397897 - 23397837
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||| ||||||||||||||  ||||||| |||||||||||||||||    
T  23397897 agggcaacccggtgcactagagctcccgcatatgtagggtccgagaaggggtcccaccatt 23397837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 24890533 - 24890468
Alignment:
Q  27 gtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattatatgca 94  Q
    ||||||||||||||| ||||| || |||||||||||||||||||||||  ||||||||||| ||||||    
T  24890533 gtgcactaaagctcctgcatacgcagggtccgggaaggggtcccacca--attggtgtattgtatgca 24890468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 25079719 - 25079779
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||||||||||||  ||||| || |||||||||||||||||||||||||    
T  25079719 agggcaacccggtgcactaaagctcttgcatacgcagggtccgggaaggggtcccaccatt 25079779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 31158451 - 31158519
Alignment:
Q  26 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattatatgca 94  Q
    |||| ||||||||||||||||| || ||||| ||||||||||||||||||| ||||| |||| ||||||    
T  31158451 ggtgtactaaagctcccgcatacgcagggtctgggaaggggtcccaccatttttggtttattgtatgca 31158519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 36871624 - 36871565
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||||||||||||||||||| ||  ||||||||||||||||||||||||    
T  36871624 agggcaacccggtgcactaaagctcccgcatacgc-aggtccgggaaggggtcccaccatt 36871565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 24200625 - 24200696
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| ||||||||||||||| | ||||  | |||||||||||||| |||||||||| ||||||||||    
T  24200625 agggcaacccggtgcactaaagctctcacatactcagggtccgggaagggttcccaccatttttggtgtatt 24200696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 39189508 - 39189555
Alignment:
Q  18 ggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggg 65  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  39189508 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggg 39189555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 34766376 - 34766330
Alignment:
Q  28 tgcactaaagctcccgcatatgcggggtccgggaaggggtcccacca 74  Q
    |||||||||||||||||||| || |||||||||||||||||||||||    
T  34766376 tgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca 34766330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 13245097 - 13245157
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| | | |||||||||||||| ||||||  ||||||||||||||||||||||||    
T  13245097 agggcaacccgatacactaaagctcccgtatatgcatggtccgggaaggggtcccaccatt 13245157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 25249740 - 25249800
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||||||||| |||||| || |||| ||||||||| ||||||||||    
T  25249740 agggcaacccggtgcactaaagctcacgcatacgcagggttcgggaagggatcccaccatt 25249800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 40762236 - 40762296
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||||||||||| |||| || |||||| |||| |||||||||||||    
T  40762236 agggcaacccggtgcactaaagctcccacatacgcagggtccaggaaagggtcccaccatt 40762296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 44643656 - 44643596
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||| || |||||||||| ||||||||||| || ||||| |||||||||||||||||||    
T  44643656 agggcagcccggtgcactaaggctcccgcatacgcagggtctgggaaggggtcccaccatt 44643596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 1289156 - 1289093
Alignment:
Q  16 agggcaacctggtgcactaaa-gctcccgcatatgcggggtccgggaaggggtcccaccattat 78  Q
    ||||||| | ||||||||||| ||||||||||||||  | ||||||||||||||||||||||||    
T  1289156 agggcaatccggtgcactaaaagctcccgcatatgcatgatccgggaaggggtcccaccattat 1289093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 22371245 - 22371199
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaa 62  Q
    ||||||||| |||||||||||||||||||||| || |||||||||||    
T  22371245 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 22371199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 4794924 - 4794875
Alignment:
Q  27 gtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||||| ||||||||||||||| || ||||||||||||||||| ||||    
T  4794924 gtgcactagagctcccgcatatgcaggatccgggaaggggtcccatcatt 4794875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 124918 - 124962
Alignment:
Q  18 ggcaacctggtgcactaaagctcccgcatatgcggggtccgggaa 62  Q
    ||||||| |||||||||||||||||||||| || |||||||||||    
T  124918 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 124962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 11514568 - 11514509
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||| | |||||||||||||||||||||| || ||||| ||||| |||||||||||||    
T  11514568 agggcaatccggtgcactaaagctcccgcatacgcagggtctgggaa-gggtcccaccatt 11514509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 17896381 - 17896333
Alignment:
Q  28 tgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||||||||| |||| || ||||||| |||||||||||||||||    
T  17896381 tgcactaaagctcccacatacgcagggtccgagaaggggtcccaccatt 17896333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 39914308 - 39914367
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| | |||||||||||||||||||| || |||| | ||||||||||||||||||    
T  39914308 agggcaacccgatgcactaaagctcccgcatacgcagggt-caggaaggggtcccaccatt 39914367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 4516354 - 4516422
Alignment:
Q  17 gggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||| || ||| |||||||||| || |||| || |||||||||||||||||||||||  |||||||||||    
T  4516354 gggcagcccggtacactaaagcttccacatacgcagggtccgggaaggggtcccacca--attggtgtatt 4516422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 19615117 - 19615056
Alignment:
Q  25 tggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||||||||||| ||||| || |||| ||||||||||| |||| ||||||||| ||||    
T  19615117 tggtgcactaaagctcctgcatacgcagggttcgggaaggggt-ccactattattggtatatt 19615056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 24860000 - 24860050
Alignment:
Q  26 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||||||||||||||||||| || ||||||| |||||||| | ||||||    
T  24860000 ggtgcactaaagctcccgcatacgcagggtccgagaaggggttctaccatt 24860050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 26684632 - 26684682
Alignment:
Q  26 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||| ||||||||||||||| || |||| ||||||| ||||||||||||    
T  26684632 ggtgcattaaagctcccgcatacgcagggttcgggaagaggtcccaccatt 26684682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 7214667 - 7214598
Alignment:
Q  18 ggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||||||||||||| ||| |||||| || | ||||| |||||| || ||||||| || |||||||    
T  7214667 ggcaacctggtgcactaaaactctcgcatacgcagtgtccgagaagggatctcaccattttttgtgtatt 7214598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 19185760 - 19185805
Alignment:
Q  31 actaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||||||||||| || |||||| ||||||||| ||||||||    
T  19185760 actaaagctcccgcatacgcagggtccaggaaggggttccaccatt 19185805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 24059012 - 24059057
Alignment:
Q  30 cactaaagctcccgcatatgcggggtccgggaaggggtcccaccat 75  Q
    ||||||||||||| |||| || |||||||| |||||||||||||||    
T  24059012 cactaaagctcccacatacgcagggtccggaaaggggtcccaccat 24059057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 30826160 - 30826119
Alignment:
Q  24 ctggtgcactaaagctcccgcatatgcggggtccgggaaggg 65  Q
    ||||||||||||||||||||||||||  ||||| ||||||||    
T  30826160 ctggtgcactaaagctcccgcatatgtagggtctgggaaggg 30826119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 31523353 - 31523304
Alignment:
Q  27 gtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||||||||||||||||||||| ||||  ||||| |||| ||||||||    
T  31523353 gtgcactaaagctcccgcatatgcagggtttgggaaagggttccaccatt 31523304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 32781298 - 32781350
Alignment:
Q  23 cctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||||||| ||||||||||||||  | ||||| |||||||||||||||||||    
T  32781298 cctggtgcac-aaagctcccgcatacacagggtctgggaaggggtcccaccatt 32781350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 40416873 - 40416914
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtcc 57  Q
    ||||||||| ||||||||||||||| ||||||||| ||||||    
T  40416873 agggcaacccggtgcactaaagctctcgcatatgcagggtcc 40416914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 17668135 - 17668075
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||||||||||||||  ||| || |||| || |||||||| ||||||||    
T  17668135 agggcaacccggtgcactaaagctcccatatacgcagggttcgagaaggggttccaccatt 17668075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 19977724 - 19977776
Alignment:
Q  24 ctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||||||||||||||||||  |  ||| ||||||||| ||||||||||    
T  19977724 ctggtgcactaaagctcccgcatacacaaggttcgggaagggatcccaccatt 19977776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 25632642 - 25632582
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||||||||||||||||||| |   ||| ||||||||  ||||||||||    
T  25632642 agggcaacccggtgcactaaagctcccgcatacgtaaggttcgggaaggaatcccaccatt 25632582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 1591 - 1665
Alignment:
Q  18 ggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattatatgca 94  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||| |||  |||||||||| ||||||    
T  1591 ggcaacctggtgcactaaagctcccgcatacgccgggtccgggaaggggtcccatcat--ttggtgtattgtatgca 1665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 11262 - 11202
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||    
T  11262 agggcaacctggtgcactagagctcccgcatatgcagggtccgggaaggtgtcccaccatt 11202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 30710 - 30650
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  30710 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatt 30650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 49; Significance: 4e-19; HSPs: 4)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 46964 - 46904
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||    
T  46964 agggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 46904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 24774 - 24834
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| | |||||||||||||||||||| || |||| ||||||||||||||||||||    
T  24774 agggcaaccggctgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatt 24834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 46710 - 46787
Alignment:
Q  17 gggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattatatgcat 95  Q
    ||||| |||| |||| ||||||||||||||| || ||||| ||||||||||||||||||| ||||| |||| |||||||    
T  46710 gggcagcctgatgcattaaagctcccgcatacgcagggtctgggaaggggtcccaccatt-ttggtatattgtatgcat 46787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 43780 - 43730
Alignment:
Q  27 gtgcactaaagctcccgcatatgcggggtccg-ggaaggggtcccaccatt 76  Q
    |||||||| ||||||||||||||| ||||||| | ||||||||||||||||    
T  43780 gtgcactagagctcccgcatatgcagggtccgagaaaggggtcccaccatt 43730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 48636 - 48696
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  48636 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatt 48696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 24135 - 24195
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||| | ||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  24135 agggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatt 24195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 59112 - 59041
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtatt 87  Q
    ||||||||| | |||||||||||||||||||| || | ||| ||||||||||||||||||| ||||||||||    
T  59112 agggcaacccgatgcactaaagctcccgcatacgcagagtctgggaaggggtcccaccatttttggtgtatt 59041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 10932 - 10883
Alignment:
Q  27 gtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||    
T  10932 gtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 10883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 13026 - 13086
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    ||||||||| ||||||||||||| |||||||| || ||||| |||||||||||||||||||    
T  13026 agggcaacccggtgcactaaagcccccgcatacgcagggtctgggaaggggtcccaccatt 13086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 72869 - 72929
Alignment:
Q  16 agggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||||||||||||||||||||||||||||| || || ||||||||||||| | ||||||    
T  72869 agggcaacctggtgcactaaagctcccgcatacgcaggttccgggaaggggtactaccatt 72929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 10050 - 10108
Alignment:
Q  14 atagggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccac 72  Q
    ||||||||||| ||||||||  |||||| |||||||| |||||||||||||||||||||    
T  10050 atagggcaacccggtgcactggagctcctgcatatgcagggtccgggaaggggtcccac 10108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 20378 - 20436
Alignment:
Q  14 atagggcaacctggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccac 72  Q
    ||||||||||| ||||||||  |||||| |||||||| |||||||||||||||||||||    
T  20378 atagggcaacccggtgcactggagctcctgcatatgcagggtccgggaaggggtcccac 20436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 3667 - 3617
Alignment:
Q  26 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 76  Q
    |||||||||||||| ||||||| || |||| ||||||||||||||| ||||    
T  3667 ggtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatcatt 3617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 4257 - 4221
Alignment:
Q  52 gggtccgggaaggggtcccacc-attattggtgtatt 87  Q
    |||||||||||||||||||||| ||||||||||||||    
T  4257 gggtccgggaaggggtcccaccaattattggtgtatt 4221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University