View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18993_high_128 (Length: 234)
Name: NF18993_high_128
Description: NF18993
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18993_high_128 |
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Alignment Details
Target: chr4 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 1984760 - 1984981
Alignment:
| Q |
1 |
ttatgttttcccaaggtaattttttaaggacttttagaggtgcagatataagtacctttttaattccatgcaaaggccctttgattagctttgaaagaaa |
100 |
Q |
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| T |
1984760 |
ttatgttttcccaaggtaactttttaaggacttttagaggtgcagatataagtacctttttgattccatgcaaaggccctttgattatctttgaaagaaa |
1984859 |
T |
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| Q |
101 |
tttccaaagtatactcaaaaatttcttaacatggatggaatcattagttgatgaattttcatctccttcttgttgatccacttcttgttgaatctcaact |
200 |
Q |
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| T |
1984860 |
tttccaaagtatactcaaaaatttcttaacatggatggaatcattagttgatgatttttcatctccttcttgttgatccacttcttgttgaatctcaact |
1984959 |
T |
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| Q |
201 |
tcaatgatgtcatgttgttttt |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
1984960 |
tcaatgatgtcatgttgttttt |
1984981 |
T |
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