View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18993_high_150 (Length: 205)
Name: NF18993_high_150
Description: NF18993
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18993_high_150 |
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Alignment Details
Target: chr8 (Bit Score: 164; Significance: 7e-88; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 164; E-Value: 7e-88
Query Start/End: Original strand, 15 - 186
Target Start/End: Original strand, 10596262 - 10596433
Alignment:
| Q |
15 |
agaggaggctgaaaatggaagaatggaacagaaacatcagagtgatcaaaagagatccgagtttccatttccgttctttctgtttccttactacaataat |
114 |
Q |
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| T |
10596262 |
agaggaggctgaaaatggaagaatggaacagaaacatcagagtgatcaaaagagatccgagtttccatttccgttctttctgtttccttactacaataat |
10596361 |
T |
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| Q |
115 |
caagaggaaggaggaaaggccaaatcagatgatgttaaattcacagacagaagtgtttcagataataccgag |
186 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |
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| T |
10596362 |
caagaggaaggaggaaaggccaaatcagatgatgttaaattcacagacagaagtgtttcggatattaccgag |
10596433 |
T |
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