View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18993_high_55 (Length: 358)
Name: NF18993_high_55
Description: NF18993
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18993_high_55 |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 339; Significance: 0; HSPs: 8)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 339; E-Value: 0
Query Start/End: Original strand, 1 - 351
Target Start/End: Original strand, 34232640 - 34232990
Alignment:
| Q |
1 |
atggcaaccatatagaaggtcatttgcctaaatctttgtccccctgtaaaacgctggagtttctaaacctcgacagcaacaaaatagaagacaaatttcc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
34232640 |
atggcaaccatatagaaggtcatttgcctaaatctttgtcccactgtaaaacgctggagtttctaaacctcggcagcaacaaaatagaagacaaatttcc |
34232739 |
T |
 |
| Q |
101 |
tgactggattcaaactctgcaagatttgaaagtgctagttttacgagataataagttgcatggtcacattgccaatttaaagatcaagaatccatttccc |
200 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34232740 |
tgactggattcaaactttgcaagatttgaaagtgctagttttacgagataataagttgcatggtcacattgccaatttaaagatcaagaatccatttccc |
34232839 |
T |
 |
| Q |
201 |
agtttagttatttttgatatctcgggaaataactttagtggtccgctaccaccgaaagactatttcaaaaagtatgaagccatgaaggctgttactcaag |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34232840 |
agtttagttatttttgatatctcgggaaataactttagtggtccgctaccaccgaaagactatttcaaaaagtatgaagccatgaaggctgttactcaag |
34232939 |
T |
 |
| Q |
301 |
tgggagagaataccagtttgctatatgtacaagattcagcagggtcctatg |
351 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34232940 |
tgggagagaataccagtttgctatatgtacaagattcagcagggtcctatg |
34232990 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 13 - 299
Target Start/End: Complemental strand, 42129126 - 42128843
Alignment:
| Q |
13 |
tagaaggtcatttgcctaaatctttgtccccctgtaaaacgctggagtttctaaacctcgacagcaacaaaatagaagacaaatttcctgactggattca |
112 |
Q |
| |
|
||||||||||||| || ||||| ||||| | ||||| || | |||||||||||||||||| |||||||| ||||||||||| |||||||| ||| |||| |
|
|
| T |
42129126 |
tagaaggtcattttccaaaatccttgtctctctgtacaaagttggagtttctaaacctcggaagcaacaacatagaagacaattttcctgattggcttca |
42129027 |
T |
 |
| Q |
113 |
aactctgcaagatttgaaagtgctagttttacgagataataagttgcatggtcacattgccaatttaaagatcaagaatccatttcccagtttagttatt |
212 |
Q |
| |
|
||| |||||| ||||||||||| | ||||| | ||| || |||||||||||| |||||| ||| ||||||||||| |||||||||| |||||| ||||| |
|
|
| T |
42129026 |
aacactgcaatatttgaaagtgttggttttgcaagacaacaagttgcatggtatcattgctaatctaaagatcaagcatccatttccaagtttaattatt |
42128927 |
T |
 |
| Q |
213 |
tttgatatctcgggaaataactttagtggtccgctaccaccgaaagactatttcaaaaagtatgaagccatgaaggctgttactcaa |
299 |
Q |
| |
|
||||||||||| || ||||||||||| |||||||||||| |||| |||||| ||||||| ||||||||||||| |||||||||| |
|
|
| T |
42128926 |
tttgatatctcaggcaataactttagcggtccgctacca---aaagcctattttaaaaagtttgaagccatgaagaatgttactcaa |
42128843 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 77 - 301
Target Start/End: Original strand, 34240459 - 34240680
Alignment:
| Q |
77 |
caacaaaatagaagacaaatttcctgactggattcaaactctgcaagatttgaaagtgctagttttacgagataataagttgcatggtcacattgccaat |
176 |
Q |
| |
|
||||||||| |||||||||||||||| |||| |||||||||| ||| | ||||||||||| ||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
34240459 |
caacaaaatggaagacaaatttcctgtctggcttcaaactctccaatacttgaaagtgctggttttgcgagacaataagttgcatggtcacattgccaat |
34240558 |
T |
 |
| Q |
177 |
ttaaagatcaagaatccatttcccagtttagttatttttgatatctcgggaaataactttagtggtccgctaccaccgaaagactatttcaaaaagtatg |
276 |
Q |
| |
|
|||||||||| | |||||||||| ||||||||||||||||||||||| | |||||||||| ||||||||||||| |||| |||||| ||| | | || |
|
|
| T |
34240559 |
ttaaagatcaggcatccatttcctagtttagttatttttgatatctcaagcaataactttactggtccgctacca---aaagcctatttaaaatattttg |
34240655 |
T |
 |
| Q |
277 |
aagccatgaaggctgttactcaagt |
301 |
Q |
| |
|
||||||||||| ||||||||||| |
|
|
| T |
34240656 |
aagccatgaagaaagttactcaagt |
34240680 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 3 - 287
Target Start/End: Complemental strand, 42123751 - 42123470
Alignment:
| Q |
3 |
ggcaaccatatagaaggtcatttgcctaaatctttgtccccctgtaaaacgctggagtttctaaacctcgacagcaacaaaatagaagacaaatttcctg |
102 |
Q |
| |
|
|||||||| ||||||| ||||| || ||||| ||||| | ||||||| | | |||||||||||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
42123751 |
ggcaaccagttagaaggccattttccaaaatccttgtctcgctgtaaagagttagagtttctaaacctcggtagcaacaaaatagaagacaattttcctg |
42123652 |
T |
 |
| Q |
103 |
actggattcaaactctgcaagatttgaaagtgctagttttacgagataataagttgcatggtcacattgccaatttaaagatcaagaatccatttcccag |
202 |
Q |
| |
|
| ||| ||||||| || |||||||||||||| || ||||| ||||| |||||||| ||||||| ||| |||||||||||||| || || |||||| || |
|
|
| T |
42123651 |
attggtttcaaacacttcaagatttgaaagtactggttttgcgagacaataagtttcatggtcccatcgccaatttaaagattgagcgtctatttccaag |
42123552 |
T |
 |
| Q |
203 |
tttagttatttttgatatctcgggaaataactttagtggtccgctaccaccgaaagactatttcaaaaagtatgaagccatgaag |
287 |
Q |
| |
|
||| | |||||||||||||| |||||||||||| ||||| |||||| |||| ||||| ||||| ||||||||||||||| |
|
|
| T |
42123551 |
cttaatcatttttgatatctctggaaataactttggtggttttctacca---aaagcctattcaaaaaattatgaagccatgaag |
42123470 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 42118016 - 42117767
Alignment:
| Q |
1 |
atggcaaccatatagaaggtcatttgcctaaatctttgtccccctgtaaaacgctggagtttctaaacctcgacagcaacaaaatagaagacaaatttcc |
100 |
Q |
| |
|
|||||||||| |||||||||| | ||||||||||| || | ||||||| ||| ||||| ||||||| | ||||||||||||| |||| | |||||| |
|
|
| T |
42118016 |
atggcaaccaattagaaggtcagattcctaaatctttctctcattgtaaaaacctg-agtttttaaaccttggcagcaacaaaataaaagaaagatttcc |
42117918 |
T |
 |
| Q |
101 |
tgactggattcaaactctgcaagatttgaaagtgctagttttacgagataataagttgcatggtcacattgccaatttaaagatcaagaatccatttccc |
200 |
Q |
| |
|
| |||| ||||||| || ||| ||||| ||||| | ||||||| ||| ||||||||||||||| |||| | ||| |||||||||| |||||||||| |
|
|
| T |
42117917 |
cgtctggcttcaaacactacaatatttgcaagtgttggttttacaagacaataagttgcatggtatcattcctaatccaaagatcaagcatccatttcca |
42117818 |
T |
 |
| Q |
201 |
agtttagttatttttgatatctcgggaaataactttagtggtccgctacca |
251 |
Q |
| |
|
|||||| |||||||| ||||||| |||||||||||||| ||||||||||| |
|
|
| T |
42117817 |
agtttaattattttttatatctcaggaaataactttagctgtccgctacca |
42117767 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 296
Target Start/End: Original strand, 41713547 - 41713691
Alignment:
| Q |
153 |
aagttgcatggtcacattgccaatttaaagatcaagaatccatttcccagttt----agttatttttgatatctcgggaaataactttagtggtccgcta |
248 |
Q |
| |
|
||||||||||||| ||| |||||||||||||||| |||||||||||||||| | | ||| ||||||||||||| ||| |||| |||||||||||| |
|
|
| T |
41713547 |
aagttgcatggtcctatttccaatttaaagatcaaacatccatttcccagtttattaattaattgttgatatctcgggcaatgacttcagtggtccgcta |
41713646 |
T |
 |
| Q |
249 |
ccaccgaaagactatttcaaaaagtatgaagccatgaaggctgttact |
296 |
Q |
| |
|
||| |||| |||||| ||||| ||| || |||||||| ||||||| |
|
|
| T |
41713647 |
cca---aaagcctatttaaaaaattatcaaaccatgaagaatgttact |
41713691 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 220
Target Start/End: Original strand, 41571960 - 41572076
Alignment:
| Q |
104 |
ctggattcaaactctgcaagatttgaaagtgctagttttacgagataataagttgcatggtcacattgccaatttaaagatcaagaatccatttcccagt |
203 |
Q |
| |
|
|||| |||||||| ||||| ||||| |||| || ||||| ||||| ||||| ||| |||||| |||||| | |||| |||||| |||||||||| ||| |
|
|
| T |
41571960 |
ctggcttcaaactatgcaatatttggaagtactggttttgcgagagaataatttgtatggtcctattgccggtgtaaatatcaagcatccatttcctagt |
41572059 |
T |
 |
| Q |
204 |
ttagttatttttgatat |
220 |
Q |
| |
|
||| ||||||||||||| |
|
|
| T |
41572060 |
ttaattatttttgatat |
41572076 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 220
Target Start/End: Original strand, 41617599 - 41617715
Alignment:
| Q |
104 |
ctggattcaaactctgcaagatttgaaagtgctagttttacgagataataagttgcatggtcacattgccaatttaaagatcaagaatccatttcccagt |
203 |
Q |
| |
|
|||| |||||||| ||||| ||||| |||| || ||||| ||||| ||||| ||| |||||| |||||| | |||| |||||| |||||||||| ||| |
|
|
| T |
41617599 |
ctggcttcaaactatgcaatatttggaagtactggttttgcgagagaataatttgtatggtcctattgccggtgtaaatatcaagcatccatttcctagt |
41617698 |
T |
 |
| Q |
204 |
ttagttatttttgatat |
220 |
Q |
| |
|
||| ||||||||||||| |
|
|
| T |
41617699 |
ttaattatttttgatat |
41617715 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 11118398 - 11118103
Alignment:
| Q |
1 |
atggcaaccatatagaaggtcatttgcctaaatctttgtccccctgtaaaacgctggagtttctaaacctcgacagcaacaaaatagaagacaaatttcc |
100 |
Q |
| |
|
|||||||||| ||||||| ||||| || ||||| ||||| | ||||||| | ||| |||||||||||||| |||||||| ||||||||||| ||||| |
|
|
| T |
11118398 |
atggcaaccagttagaaggccattttccaaaatccttgtctcggtgtaaaaagttggcgtttctaaacctcggcagcaacagaatagaagacagttttcc |
11118299 |
T |
 |
| Q |
101 |
tgactggattcaaactctgcaagatttgaaagtgctagttttacgagataataagttgcatggtcacattgccaatttaaagatcaagaatccatttccc |
200 |
Q |
| |
|
||| ||| ||||||| ||| |||||||||||| | ||||| ||||| |||||||||||||||| ||||| |||||||||||| || ||| |||||| |
|
|
| T |
11118298 |
tgattggcttcaaacattgccagatttgaaagtattggttttgcgagacaataagttgcatggtcccattgaaaatttaaagatcgagcatctatttcca |
11118199 |
T |
 |
| Q |
201 |
agtttagttatttttgatatctcgggaaataactttagtggtccgctaccaccgaaagactatttcaaaaagtatgaagccatgaaggctgttactcaa |
299 |
Q |
| |
|
|| ||| | ||||||||||||||||| || | |||||||||| |||||| |||| |||||| ||||| |||||||| |||||| |||||||||| |
|
|
| T |
11118198 |
agcttaatcatttttgatatctcgggcaacagctttagtggttttctacca---aaagcctatttaaaaaactatgaagctatgaagaatgttactcaa |
11118103 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 89; Significance: 8e-43; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 12248715 - 12248432
Alignment:
| Q |
1 |
atggcaaccatatagaaggtcatttgcctaaatctttgtccccctgtaaaacgctggagtttctaaacctcgacagcaacaaaatagaagacaaatttcc |
100 |
Q |
| |
|
|||||||||| ||||||| ||| | |||| ||| ||||| | ||||||| | || ||||||||||||||| ||||||||||||||||||| | ||||| |
|
|
| T |
12248715 |
atggcaaccaattagaaggccatattcctagatccttgtctctctgtaaagggttgaagtttctaaacctcggcagcaacaaaatagaagacgagtttcc |
12248616 |
T |
 |
| Q |
101 |
tgactggattcaaactctgcaagatttgaaagtgctagttttacgagataataagttgcatggtcacattgccaatttaaagatcaagaatccatttccc |
200 |
Q |
| |
|
||| ||| ||||||| ||||||||||||||||| | | | ||||| ||||||||||||||| ||||| ||| |||| | ||| |||||||||| |
|
|
| T |
12248615 |
tgattggcttcaaacactgcaagatttgaaagttttgctgctgcgagacaataagttgcatggtatcattgttaatctaaatacaaagcatccatttcca |
12248516 |
T |
 |
| Q |
201 |
agtttagttatttttgatatctcgggaaataactttagtggtccgctaccaccgaaagactatttcaaaaagtatgaagccatgaag |
287 |
Q |
| |
|
|||||| ||||||||||||||| || |||||||||||||||||||||||| || | |||||| |||||| ||||||||||||| |
|
|
| T |
12248515 |
agtttaactatttttgatatctcaggcaataactttagtggtccgctacca---aatgcctattttgaaaagtttgaagccatgaag |
12248432 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 58 - 287
Target Start/End: Original strand, 11994271 - 11994497
Alignment:
| Q |
58 |
agtttctaaacctcgacagcaacaaaatagaagacaaatttcctgactggattcaaactctgcaagatttgaaagtgctagttttacgagataataagtt |
157 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| | |||||||| ||| ||||||| ||||||||||||||||| | | | ||||| |||||||| |
|
|
| T |
11994271 |
agtttctaaacctcggcagcaacaaaatagaagacgagtttcctgattggcttcaaacactgcaagatttgaaagttttgctgctgcgagacaataagtt |
11994370 |
T |
 |
| Q |
158 |
gcatggtcacattgccaatttaaagatcaagaatccatttcccagtttagttatttttgatatctcgggaaataactttagtggtccgctaccaccgaaa |
257 |
Q |
| |
|
||||| | ||||| ||| |||| | ||| |||||||||| |||||| |||||||||||||| || |||||||||||||||||||||||| || |
|
|
| T |
11994371 |
gcatgatatcattgttaatctaaatacaaagcatccatttccaagtttaactatttttgatatctaaggcaataactttagtggtccgctacca---aat |
11994467 |
T |
 |
| Q |
258 |
gactatttcaaaaagtatgaagccatgaag |
287 |
Q |
| |
|
| |||||| |||||| ||||||||||||| |
|
|
| T |
11994468 |
gcctattttgaaaagtttgaagccatgaag |
11994497 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 32681751 - 32681992
Alignment:
| Q |
1 |
atggcaaccatatagaaggtcatttgcctaaatctttgtccccctgtaaaacgctggagtttctaaacctcgacagcaacaaaatagaagacaaatttcc |
100 |
Q |
| |
|
|||||||||| | ||||| ||||| || ||||| ||||| |||||||| | |||||||||||||||||| |||||||||||||| ||||| || || |
|
|
| T |
32681751 |
atggcaaccacttggaaggccattttccgaaatccttgtctggctgtaaaaagttggagtttctaaacctcggaagcaacaaaatagacgacaatttccc |
32681850 |
T |
 |
| Q |
101 |
tgactggattcaaactctgcaagatttgaaagtgctagttttacgagataataagttgcatggtcacattgccaatttaaagatcaagaatccatttccc |
200 |
Q |
| |
|
| ||| |||| || |||||||||||||||| | ||||| || || || ||||||||||||| ||||| ||||||||||| | | ||| |||||| |
|
|
| T |
32681851 |
atattggcttcatacaatgcaagatttgaaagtattggttttgcgtgacaacaagttgcatggtcccattgtcaatttaaagaacgaacatctatttcct |
32681950 |
T |
 |
| Q |
201 |
agtttagttatttttgatatctcgggaaataactttagtggt |
242 |
Q |
| |
|
|| ||| | |||||||||||||| ||||| ||||| |||||| |
|
|
| T |
32681951 |
agcttaatcatttttgatatctctggaaacaacttcagtggt |
32681992 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 13 - 303
Target Start/End: Original strand, 25522881 - 25523168
Alignment:
| Q |
13 |
tagaaggtcatttgcctaaatctttgtccccctgtaaaacgctggagtttctaaacctcgacagcaacaaaatagaagacaaatttcctgactggattca |
112 |
Q |
| |
|
||||||||| ||| || |||||||||| || ||||||| | |||||||||||||||||| |||||||||||||||||| ||||| || ||| |||| |
|
|
| T |
25522881 |
tagaaggtcgttttccgaaatctttgttccggtgtaaaaagttggagtttctaaacctcggggtcaacaaaatagaagacaattttccggattggcttca |
25522980 |
T |
 |
| Q |
113 |
aactctgcaagatttgaaagtgctagttttacgagataataagttgcatggtcacattgccaatttaaagatcaagaatccatttcccagtttagttatt |
212 |
Q |
| |
|
||| |||| |||||||||||| | ||||| ||||| || |||||||||||| | ||| ||||||||| |||||| || |||||| |||||| | ||| |
|
|
| T |
25522981 |
aacaatgcaggatttgaaagtgttggttttgcgagacaacaagttgcatggttcccttgtcaatttaaaaatcaagcattcatttcaaagtttaatcatt |
25523080 |
T |
 |
| Q |
213 |
tttgatatctcgggaaataactttagtggtccgctaccaccgaaagactatttcaaaaagtatgaagccatgaaggctgttactcaagtgg |
303 |
Q |
| |
|
||||||||||| || || || || ||||| |||||| |||| |||||| | ||| ||||||||||||||| |||||||||||||| |
|
|
| T |
25523081 |
tttgatatctcaggtaacaatttaggtggttttctacca---aaagcctatttaagaaattatgaagccatgaagaatgttactcaagtgg |
25523168 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 13 - 303
Target Start/End: Complemental strand, 24141072 - 24140786
Alignment:
| Q |
13 |
tagaaggtcatttgcctaaatctttgtccccctgtaaaacgctggagtttctaaacctcgacagcaacaaaatagaagacaaatttcctgactggattca |
112 |
Q |
| |
|
||||||| ||||| || ||||| ||||| | ||||||| |||||| ||||||||||| || |||||||||||||||||| ||| |||| ||| ||| |
|
|
| T |
24141072 |
tagaaggccattttccgaaatccttgtctcgatgtaaaaatttggagtatctaaacctcggcaacaacaaaatagaagacaatttttctgattggcttct |
24140973 |
T |
 |
| Q |
113 |
aactctgcaagatttgaaagtgctagttttacgagataataagttgcatggtcacattgccaatttaaagatcaagaatccatttcccagtttagttatt |
212 |
Q |
| |
|
||| |||||| ||||| |||| | ||||| ||||| |||||||| ||||||||||| ||||||||||||| || || |||||| || ||| | | | |
|
|
| T |
24140972 |
aacactgcaatatttggaagtattggttttgcgagacaataagttacatggtcacatcaccaatttaaagatgtagcatttatttccaaggttaatca-t |
24140874 |
T |
 |
| Q |
213 |
tttgatatctcgggaaataactttagtggtccgctaccaccgaaagactatttcaaaaagtatgaagccatgaaggctgttactcaagtgg |
303 |
Q |
| |
|
||||||||||| ||||| ||||| |||||| || ||| |||| |||||| ||||| |||||||||||||||| |||||||||||||| |
|
|
| T |
24140873 |
tttgatatctctggaaacaacttcagtggttttctgcca---aaagcctatttaaaaaattatgaagccatgaaggatgttactcaagtgg |
24140786 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 285
Target Start/End: Complemental strand, 8523361 - 8523080
Alignment:
| Q |
1 |
atggcaaccatatagaaggtcatttgcctaaatctttgtccccctgtaaaacgctggagtttctaaacctcgacagcaacaaaatagaagacaaatttcc |
100 |
Q |
| |
|
|||||||||| ||||||||||| | |||||||| ||||| | ||||||| | || |||| ||||||| | || ||||| |||||||||||| ||||| |
|
|
| T |
8523361 |
atggcaaccaattagaaggtcatattcctaaatccttgtctctctgtaaagggttgatgtttttaaaccttggcaacaacataatagaagacaattttcc |
8523262 |
T |
 |
| Q |
101 |
tgactggattcaaactctgcaagatttgaaagtgctagttttacgagataataagttgcatggtcacattgccaatttaaagatcaagaatccatttccc |
200 |
Q |
| |
|
| | ||| || |||| ||||| ||||||||||| | |||| ||||| ||||||||||||||| ||||| ||| |||||||||| |||||||||| |
|
|
| T |
8523261 |
tcattggcttgaaacactgcattatttgaaagtgttgcttttgcgagacaataagttgcatggtatcattgttaatccaaagatcaagcatccatttcca |
8523162 |
T |
 |
| Q |
201 |
agtttagttatttttgatatctcgggaaataactttagtggtccgctaccaccgaaagactatttcaaaaagtatgaagccatga |
285 |
Q |
| |
|
|||| ||||||||||||||| ||||||||||||||||| |||||| ||| |||||||||||||| ||||||||||| |
|
|
| T |
8523161 |
gatttaactatttttgatatctcaaacaataactttagtggtcctctacca---aaatcctatttcaaaaagtttgaagccatga |
8523080 |
T |
 |
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