View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18993_low_22 (Length: 463)
Name: NF18993_low_22
Description: NF18993
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18993_low_22 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 415; Significance: 0; HSPs: 15)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 415; E-Value: 0
Query Start/End: Original strand, 1 - 448
Target Start/End: Complemental strand, 36226554 - 36226107
Alignment:
| Q |
1 |
aggagcagagacatgggctgtgtgaatggctgaggcagattcaatacatttgctctgatgctgaatatgtactggatggatttgaatttcaagacaaacg |
100 |
Q |
| |
|
|||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36226554 |
aggaccagaggcatgggcagtgtgaatggctgaggcagattcaatacatttgctctgatgctgaatatgtactggatggatttgaatttcaagacaaacg |
36226455 |
T |
|
| Q |
101 |
aaagcaagttgtggaagcttcatgcagcactaggatgaaggtacgccaannnnnnncttcctctagtccacttgctttccgttttaagatggcatgtcga |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36226454 |
aaagcaagttgtggaagcttcatgcagcactaggatgaaggtacgccaatttttttcttcctctagtccacttgctttccgttttaagatggcatgtcga |
36226355 |
T |
|
| Q |
201 |
atcaaagagattagggatagattgaataaggtggcagctgatgggactaggtttggacttgcagcaattagtgttgatttaggacttgctgtgcagaaga |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36226354 |
atcaaagagattagggatagattgaataaggtggcagctgatgggactaggtttggacttgcagcaattagtgttgatttaggacttgctgtgcagaaga |
36226255 |
T |
|
| Q |
301 |
gagaaatgactcattcccacgttgatgcttcagatgtgataggaagggagaatgagaggaatgatattatcaagcttttgatgcagccacatcctcaagg |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36226254 |
gagaaatgactcattcccacgttgatgcttcagatgtgataggaagggagaatgagaggaatgatattatcaagcttttgatgcagccacatcctcaagg |
36226155 |
T |
|
| Q |
401 |
tgatgctgatggtgataaaagtttgtgtgttattcccatagtgggaat |
448 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36226154 |
tgatgctgatggtgataaaagtttgtgtgttattcccatagtgggaat |
36226107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 6 - 448
Target Start/End: Complemental strand, 35982670 - 35982234
Alignment:
| Q |
6 |
cagagacatgggctgtgtgaatggctgaggcagattcaatacatttgctctgatgctgaatatgtactggatggatttgaatttcaagacaaacgaaagc |
105 |
Q |
| |
|
||||| || |||||| | |||||||||||||||||||||| ||||||||||||||||||| ||||| | |||||||||| ||||||||||||||||||| |
|
|
| T |
35982670 |
cagaggcacgggctgcgggaatggctgaggcagattcaatgcatttgctctgatgctgaagatgtattcaatggatttgagtttcaagacaaacgaaagc |
35982571 |
T |
|
| Q |
106 |
aagttgtggaagcttcatgcagcactaggatgaaggtacgccaannnnnnncttcctctagtccacttgctttccgttttaagatggcatgtcgaatcaa |
205 |
Q |
| |
|
||||||| |||||||| |||||||| ||| |||||||||||| ||||||||| |||||||||||| ||| ||| ||||||| ||||||||| |
|
|
| T |
35982570 |
aagttgttgaagcttctggcagcactcggacgaaggtacgccacttcttttcttcctctaatccacttgcttttcgtcttaggatggcacatcgaatcaa |
35982471 |
T |
|
| Q |
206 |
agagattagggatagattgaataaggtggcagctgatgggactaggtttggacttgcagcaattagtgttgatttaggacttgctgtgcagaagagagaa |
305 |
Q |
| |
|
||| |||||| ||||||| |||||||||||||||||||||||| |||||||||| |||| ||||||| |||| | |||||| || |||||| |
|
|
| T |
35982470 |
agaaattaggaatagattagataaggtggcagctgatgggactaagtttggacttatgagaattgatgttgatcctggacatattgtgcaaaaaagagaa |
35982371 |
T |
|
| Q |
306 |
atgactcattcccacgttgatgcttcagatgtgataggaagggagaatgagaggaatgatattatcaagcttttgatgcagccacatcctcaaggtgatg |
405 |
Q |
| |
|
||||||||||||| |||||||||| |||||||||||||| ||||| || ||| |||| ||||||||||||||||||| |||||||||||||| |
|
|
| T |
35982370 |
ttgactcattcccatgttgatgctttggatgtgataggaagagagaaggatagggatgaaattatcaagcttttgatgctaccacatcctcaagg----- |
35982276 |
T |
|
| Q |
406 |
ctgatggtgataaaagtttgtgtgttattcccatagtgggaat |
448 |
Q |
| |
|
||||||||||||||| || |||||||||||||| |||||||| |
|
|
| T |
35982275 |
-tgatggtgataaaagcttatgtgttattcccattgtgggaat |
35982234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 6 - 448
Target Start/End: Complemental strand, 36004082 - 36003646
Alignment:
| Q |
6 |
cagagacatgggctgtgtgaatggctgaggcagattcaatacatttgctctgatgctgaatatgtactggatggatttgaatttcaagacaaacgaaagc |
105 |
Q |
| |
|
||||| || |||||| | |||||||||||||||||||||| ||||||||||||||||||| ||||| | |||||||||| ||||||||||||||||||| |
|
|
| T |
36004082 |
cagaggcacgggctgcgggaatggctgaggcagattcaatgcatttgctctgatgctgaagatgtattcaatggatttgagtttcaagacaaacgaaagc |
36003983 |
T |
|
| Q |
106 |
aagttgtggaagcttcatgcagcactaggatgaaggtacgccaannnnnnncttcctctagtccacttgctttccgttttaagatggcatgtcgaatcaa |
205 |
Q |
| |
|
||||||| |||||||| |||||||| ||| |||||||||||| ||||||||| |||||||||||| ||| ||| ||||||| ||||||||| |
|
|
| T |
36003982 |
aagttgttgaagcttctggcagcactcggacgaaggtacgccacttcttttcttcctctaatccacttgcttttcgtcttaggatggcacatcgaatcaa |
36003883 |
T |
|
| Q |
206 |
agagattagggatagattgaataaggtggcagctgatgggactaggtttggacttgcagcaattagtgttgatttaggacttgctgtgcagaagagagaa |
305 |
Q |
| |
|
||| |||||| ||||||| |||||||||||||||||||||||| |||||||||| |||| ||||||| |||| | |||||| || |||||| |
|
|
| T |
36003882 |
agaaattaggaatagattagataaggtggcagctgatgggactaagtttggacttatgagaattgatgttgatcctggacatattgtgcaaaaaagagaa |
36003783 |
T |
|
| Q |
306 |
atgactcattcccacgttgatgcttcagatgtgataggaagggagaatgagaggaatgatattatcaagcttttgatgcagccacatcctcaaggtgatg |
405 |
Q |
| |
|
||||||||||||| |||||||||| |||||||||||||| ||||| || ||| |||| ||||||||||||||||||| |||||||||||||| |
|
|
| T |
36003782 |
ttgactcattcccatgttgatgctttggatgtgataggaagagagaaggatagggatgaaattatcaagcttttgatgctaccacatcctcaagg----- |
36003688 |
T |
|
| Q |
406 |
ctgatggtgataaaagtttgtgtgttattcccatagtgggaat |
448 |
Q |
| |
|
||||||||||||||| || |||||||||||||| |||||||| |
|
|
| T |
36003687 |
-tgatggtgataaaagcttatgtgttattcccattgtgggaat |
36003646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 12 - 448
Target Start/End: Complemental strand, 35978096 - 35977666
Alignment:
| Q |
12 |
catgggctgtgtgaatggctgaggcagattcaatacatttgctctgatgctgaatatgtactggatggatttgaatttcaagacaaacgaaagcaagttg |
111 |
Q |
| |
|
|||||| || ||||||||||||||||||||||| | || |||| |||||||||| ||||| ||||||||||| | || |||||||| ||||||||||||| |
|
|
| T |
35978096 |
catggggtgcgtgaatggctgaggcagattcaaaatatatgctatgatgctgaagatgtattggatggatttaacttgcaagacaagcgaaagcaagttg |
35977997 |
T |
|
| Q |
112 |
tggaagcttcatgcagcactaggatgaaggtacgccaannnnnnncttcctctagtccacttgctttccgttttaagatggcatgtcgaatcaaagagat |
211 |
Q |
| |
|
|| ||||||| | |||| || ||||||||||||| ||||||||| |||||||| ||||||||||| ||||||| ||| |||||||||||| |
|
|
| T |
35977996 |
tgaaagcttctcgaagcagacgggtgaaggtacgccacttcttttcttcctctaatccacttgttttccgttttaggatggcacgtcaaatcaaagagat |
35977897 |
T |
|
| Q |
212 |
tagggatagattgaataaggtggcagctgatgggactaggtttggacttgcagcaattagtgttgatttaggacttgctgtgcagaagagagaaatgact |
311 |
Q |
| |
|
|||||||||| || |||||||||||||||||||| |||||||| ||| || | ||||||| ||||| | |||||| | ||||||||||| |
|
|
| T |
35977896 |
tagggatagaatggataaggtggcagctgatggggtcaggtttggtcttaca------aatgttgatcccggactcgttgtgcaacaaagagaaatgaca |
35977803 |
T |
|
| Q |
312 |
cattcccacgttgatgcttcagatgtgataggaagggagaatgagaggaatgatattatcaagcttttgatgcagccacatcctcaaggtgatgctgatg |
411 |
Q |
| |
|
|| | || ||||||||||| |||||||||||| || |||||| |||| |||||||| |||||||||||| |||| ||||| | |||| || || |
|
|
| T |
35977802 |
tatcctcatattgatgcttcaagtgtgataggaagagaaaatgagcaagatgaaattatcaatcttttgatgcagtcacaccctcacagcgatggtggtg |
35977703 |
T |
|
| Q |
412 |
gtgataaaagtttgtgtgttattcccatagtgggaat |
448 |
Q |
| |
|
||||||| ||| | ||||| ||||| ||||||||||| |
|
|
| T |
35977702 |
gtgataatagtctttgtgtcattccaatagtgggaat |
35977666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 12 - 448
Target Start/End: Complemental strand, 35999508 - 35999078
Alignment:
| Q |
12 |
catgggctgtgtgaatggctgaggcagattcaatacatttgctctgatgctgaatatgtactggatggatttgaatttcaagacaaacgaaagcaagttg |
111 |
Q |
| |
|
|||||| || ||||||||||||||||||||||| | || |||| |||||||||| ||||| ||||||||||| | || |||||||| ||||||||||||| |
|
|
| T |
35999508 |
catggggtgcgtgaatggctgaggcagattcaaaatatatgctatgatgctgaagatgtattggatggatttaacttgcaagacaagcgaaagcaagttg |
35999409 |
T |
|
| Q |
112 |
tggaagcttcatgcagcactaggatgaaggtacgccaannnnnnncttcctctagtccacttgctttccgttttaagatggcatgtcgaatcaaagagat |
211 |
Q |
| |
|
|| ||||||| | |||| || ||||||||||||| ||||||||| |||||||| ||||||||||| ||||||| ||| |||||||||||| |
|
|
| T |
35999408 |
tgaaagcttctcgaagcagacgggtgaaggtacgccacttcttttcttcctctaatccacttgttttccgttttaggatggcacgtcaaatcaaagagat |
35999309 |
T |
|
| Q |
212 |
tagggatagattgaataaggtggcagctgatgggactaggtttggacttgcagcaattagtgttgatttaggacttgctgtgcagaagagagaaatgact |
311 |
Q |
| |
|
|||||||||| || |||||||||||||||||||| |||||||| ||| || | ||||||| ||||| | |||||| | ||||||||||| |
|
|
| T |
35999308 |
tagggatagaatggataaggtggcagctgatggggtcaggtttggtcttaca------aatgttgatcccggactcgttgtgcaacaaagagaaatgaca |
35999215 |
T |
|
| Q |
312 |
cattcccacgttgatgcttcagatgtgataggaagggagaatgagaggaatgatattatcaagcttttgatgcagccacatcctcaaggtgatgctgatg |
411 |
Q |
| |
|
|| | || ||||||||||| |||||||||||| || |||||| |||| |||||||| |||||||||||| |||| ||||| | |||| || || |
|
|
| T |
35999214 |
tatcctcatattgatgcttcaagtgtgataggaagagaaaatgagcaagatgaaattatcaatcttttgatgcagtcacaccctcacagcgatggtggtg |
35999115 |
T |
|
| Q |
412 |
gtgataaaagtttgtgtgttattcccatagtgggaat |
448 |
Q |
| |
|
||||||| ||| | ||||| ||||| ||||||||||| |
|
|
| T |
35999114 |
gtgataatagtctttgtgtcattccaatagtgggaat |
35999078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 19 - 448
Target Start/End: Original strand, 36217046 - 36217475
Alignment:
| Q |
19 |
tgtgtgaatggctgaggcagattcaatacatttgctctgatgctgaatatgtactggatggatttgaatttcaagacaaacgaaagcaagttgtggaagc |
118 |
Q |
| |
|
||||||||||| | |||||||||||| |||| |||| |||||||||| ||||| ||||||||||||| || ||||||| |||||||| |||| ||||| |
|
|
| T |
36217046 |
tgtgtgaatggttaaggcagattcaaaacatctgctatgatgctgaagatgtattggatggatttgagttgcaagacaggagaaagcaatttgttgaagc |
36217145 |
T |
|
| Q |
119 |
ttcatgcagcactaggatgaaggtacgccaannnnnnncttcctctagtccacttgctttccgttttaagatggcatgtcgaatcaaagagattagggat |
218 |
Q |
| |
|
||| | ||||| || |||||||| |||| ||||||||| ||| |||||||||||||||| |||| || ||| ||||||||||||||| ||| |
|
|
| T |
36217146 |
ttctggaagcacacggttgaaggtatgccacttcttttcttcctctaatccgcttgctttccgttttaggatgtcacgtcaaatcaaagagattagagat |
36217245 |
T |
|
| Q |
219 |
agattgaataaggtggcagctgatgggactaggtttggacttgcagcaattagtgttgatttaggacttgctgtgcagaagagagaaatgactcattccc |
318 |
Q |
| |
|
|||||| |||| ||||||||||||||||| | ||||||||||| |||| |||||| |||||| ||||||| || |||||||| || |||||| |
|
|
| T |
36217246 |
agattggataaagtggcagctgatgggaccaagtttggacttgtgagaattcatgttgagcccggactttctgtgcacaatagagaaatcacctattccc |
36217345 |
T |
|
| Q |
319 |
acgttgatgcttcagatgtgataggaagggagaatgagaggaatgatattatcaagcttttgatgcagccacatcctcaaggtgatgctgatggtgataa |
418 |
Q |
| |
|
| |||||| |||| ||| ||||||||||||||||| | | | | |||||| ||||||||||| | | ||||||||||| ||| ||||| ||| |
|
|
| T |
36217346 |
atattgatgtttcaagtgttataggaagggagaatgacaaggaagcaattatcgagcttttgatggattccgatcctcaaggttatggaaatggtcatag |
36217445 |
T |
|
| Q |
419 |
aagtttgtgtgttattcccatagtgggaat |
448 |
Q |
| |
|
|||||| ||||||||||||||||||||||| |
|
|
| T |
36217446 |
aagtttatgtgttattcccatagtgggaat |
36217475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 12 - 448
Target Start/End: Complemental strand, 35947436 - 35947006
Alignment:
| Q |
12 |
catgggctgtgtgaatggctgaggcagattcaatacatttgctctgatgctgaatatgtactggatggatttgaatttcaagacaaacgaaagcaagttg |
111 |
Q |
| |
|
||||||||| | |||||||||||||||||||| | |||||| |||||||||| ||||| ||||||||||| | || |||||||| ||||||||||||| |
|
|
| T |
35947436 |
catgggctgcgggaatggctgaggcagattcagaatatttgccatgatgctgaagatgtattggatggatttaacttgcaagacaagcgaaagcaagttg |
35947337 |
T |
|
| Q |
112 |
tggaagcttcatgcagcactaggatgaaggtacgccaannnnnnncttcctctagtccacttgctttccgttttaagatggcatgtcgaatcaaagagat |
211 |
Q |
| |
|
|| ||||||| | ||||| || ||||| || ||| ||||||||| |||||||| ||| ||||||| ||||||| ||| |||||||||||| |
|
|
| T |
35947336 |
tgaaagcttctcgaagcacacgggtgaagttagtccacttcttttcttcctctaatccacttgtttttcgttttaggatggcacgtcaaatcaaagagat |
35947237 |
T |
|
| Q |
212 |
tagggatagattgaataaggtggcagctgatgggactaggtttggacttgcagcaattagtgttgatttaggacttgctgtgcagaagagagaaatgact |
311 |
Q |
| |
|
|||||||||| || |||||||||||||||||||| |||||||| ||| || | ||||||| ||||| | |||||| | ||||||||||| |
|
|
| T |
35947236 |
tagggatagaatggataaggtggcagctgatggggtcaggtttggtcttaca------aatgttgatcccggactcgttgtgcaacaaagagaaatgaca |
35947143 |
T |
|
| Q |
312 |
cattcccacgttgatgcttcagatgtgataggaagggagaatgagaggaatgatattatcaagcttttgatgcagccacatcctcaaggtgatgctgatg |
411 |
Q |
| |
|
|| | || ||||||||||| |||||||||||| || |||||| |||| || |||| ||||||||||||||||||||||| || |||| ||||| |
|
|
| T |
35947142 |
tatcctcatattgatgcttcaagtgtgataggaagagaaaatgagcaagatgaaatcttcaatcttttgatgcagccacatcctcacggcgatggtgatg |
35947043 |
T |
|
| Q |
412 |
gtgataaaagtttgtgtgttattcccatagtgggaat |
448 |
Q |
| |
|
||||||| ||| | ||||| ||||| ||||||||||| |
|
|
| T |
35947042 |
gtgataatagtctctgtgtcattccaatagtgggaat |
35947006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 22 - 245
Target Start/End: Complemental strand, 35958631 - 35958408
Alignment:
| Q |
22 |
gtgaatggctgaggcagattcaatacatttgctctgatgctgaatatgtactggatggatttgaatttcaagacaaacgaaagcaagttgtggaagcttc |
121 |
Q |
| |
|
||||||||||||||||||||||| | || |||| |||||||||| ||||| ||||||||||||| || |||||||| ||||| ||||||||||||||||| |
|
|
| T |
35958631 |
gtgaatggctgaggcagattcaaaatatatgctatgatgctgaagatgtattggatggatttgacttgcaagacaagcgaaaacaagttgtggaagcttc |
35958532 |
T |
|
| Q |
122 |
atgcagcactaggatgaaggtacgccaannnnnnncttcctctagtccacttgctttccgttttaagatggcatgtcgaatcaaagagattagggataga |
221 |
Q |
| |
|
| ||||| || ||||||||||||| ||||||||| | ||||||||||||||||||| ||||| | |||||||||||||||||||||| |
|
|
| T |
35958531 |
tggaagcacacgggtgaaggtacgccacttgttttcttcctctaattcacttgctttccgttttaaaatggcgcaccaaatcaaagagattagggataga |
35958432 |
T |
|
| Q |
222 |
ttgaataaggtggcagctgatggg |
245 |
Q |
| |
|
||| ||||||||||||| |||||| |
|
|
| T |
35958431 |
ttggataaggtggcagcggatggg |
35958408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 157 - 448
Target Start/End: Original strand, 36221169 - 36221460
Alignment:
| Q |
157 |
cttcctctagtccacttgctttccgttttaagatggcatgtcgaatcaaagagattagggatagattgaataaggtggcagctgatgggactaggtttgg |
256 |
Q |
| |
|
||||||| | |||||| ||||||||||||| |||| || | ||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||| |
|
|
| T |
36221169 |
cttcctcaaatccactagctttccgttttaggatgtcacataaaatcaaagagattagagatagattgaataaggtggcagctgacgggacaaggtttgg |
36221268 |
T |
|
| Q |
257 |
acttgcagcaattagtgttgatttaggacttgctgtgcagaagagagaaatgactcattcccacgttgatgcttcagatgtgataggaagggagaatgag |
356 |
Q |
| |
|
||||| ||| ||||| | | || |||||||| ||||||| | |||||||| |||||||||||||| ||| || || ||||||||||| |
|
|
| T |
36221269 |
acttgtgagaatcgatgttgcacctgatcctgttgtgcagaggagagaattcactcattcatacgttgatgcttcaagtgttattgggagggagaatgac |
36221368 |
T |
|
| Q |
357 |
aggaatgatattatcaagcttttgatgcagccacatcctcaaggtgatgctgatggtgataaaagtttgtgtgttattcccatagtgggaat |
448 |
Q |
| |
|
||| | || |||||||| ||||||||||| || |||||||| || |||| |||||||| |||| ||||||||||||||||||||| ||||| |
|
|
| T |
36221369 |
agggaagaaattatcaaacttttgatgcaaccgcatcctcatggagatggagatggtgacaaaaatttgtgtgttattcccatagttggaat |
36221460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 12 - 434
Target Start/End: Complemental strand, 35973962 - 35973540
Alignment:
| Q |
12 |
catgggctgtgtgaatggctgaggcagattcaatacatttgctctgatgctgaatatgtactggatggatttgaatttcaagacaaacgaaagcaagttg |
111 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |||| ||||| ||||||||| ||||| | |||||||||||| | ||| |||| || || || ||| |
|
|
| T |
35973962 |
catgggctgcgtgaatggctgaggcagattcaaaacatctgctccgatgctgaagatgtatttgatggatttgaactccaacacaagcggaaaaaatttg |
35973863 |
T |
|
| Q |
112 |
tggaagcttcatgcagcactaggatgaaggtacgccaannnnnnncttcctctagtccacttgctttccgttttaagatggcatgtcgaatcaaagagat |
211 |
Q |
| |
|
|||| ||||| ||||||| || ||||||||| || | | ||||| | |||||||| |||||||| || |||| || ||||||| || |
|
|
| T |
35973862 |
tggatgcttctggcagcacgagcatgaaggtaagctacttcttttcctcctccaatccacttgttttccgttctagaatggaccatcagatcaaaggcat |
35973763 |
T |
|
| Q |
212 |
tagggatagattgaataaggtggcagctgatgggactaggtttggacttgcagcaattagtgttgatttaggacttgctgtgcagaagagagaaatgact |
311 |
Q |
| |
|
| ||||||| ||| ||||||| ||||| ||||||| | |||||| ||||| ||| || | | ||||| | |||| | ||||||| ||||| |
|
|
| T |
35973762 |
tcgggataggttggataaggtagcagccgatgggaacaagtttggtcttgcgaaaatcgacaatggtcctgaacttgttttgcataggagagaattgact |
35973663 |
T |
|
| Q |
312 |
cattcccacgttgatgcttcagatgtgataggaagggagaatgagaggaatgatattatcaagcttttgatgcagccacatcctcaaggtgatgctgatg |
411 |
Q |
| |
|
||||||| || ||||||||| ||| || || ||||||||||| ||| | || |||||||||||| ||||||| |||| |||||||||||||| || | |
|
|
| T |
35973662 |
aattcccatgtcgatgcttcaagtgttattgggagggagaatgatagggaagaaattatcaagcttctgatgcaaccacgtcctcaaggtgatggagacg |
35973563 |
T |
|
| Q |
412 |
gtgataaaagtttgtgtgttatt |
434 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
35973562 |
gtgataaaagtttgtgtgttatt |
35973540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 12 - 434
Target Start/End: Complemental strand, 35995374 - 35994952
Alignment:
| Q |
12 |
catgggctgtgtgaatggctgaggcagattcaatacatttgctctgatgctgaatatgtactggatggatttgaatttcaagacaaacgaaagcaagttg |
111 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |||| ||||| ||||||||| ||||| | |||||||||||| | ||| |||| || || || ||| |
|
|
| T |
35995374 |
catgggctgcgtgaatggctgaggcagattcaaaacatctgctccgatgctgaagatgtatttgatggatttgaactccaacacaagcggaaaaaatttg |
35995275 |
T |
|
| Q |
112 |
tggaagcttcatgcagcactaggatgaaggtacgccaannnnnnncttcctctagtccacttgctttccgttttaagatggcatgtcgaatcaaagagat |
211 |
Q |
| |
|
|||| ||||| ||||||| || ||||||||| || | | ||||| | |||||||| |||||||| || |||| || ||||||| || |
|
|
| T |
35995274 |
tggatgcttctggcagcacgagcatgaaggtaagctacttcttttcctcctccaatccacttgttttccgttctagaatggaccatcagatcaaaggcat |
35995175 |
T |
|
| Q |
212 |
tagggatagattgaataaggtggcagctgatgggactaggtttggacttgcagcaattagtgttgatttaggacttgctgtgcagaagagagaaatgact |
311 |
Q |
| |
|
| ||||||| ||| ||||||| ||||| ||||||| | |||||| ||||| ||| || | | ||||| | |||| | ||||||| ||||| |
|
|
| T |
35995174 |
tcgggataggttggataaggtagcagccgatgggaacaagtttggtcttgcgaaaatcgacaatggtcctgaacttgttttgcataggagagaattgact |
35995075 |
T |
|
| Q |
312 |
cattcccacgttgatgcttcagatgtgataggaagggagaatgagaggaatgatattatcaagcttttgatgcagccacatcctcaaggtgatgctgatg |
411 |
Q |
| |
|
||||||| || ||||||||| ||| || || ||||||||||| ||| | || |||||||||||| ||||||| |||| |||||||||||||| || | |
|
|
| T |
35995074 |
aattcccatgtcgatgcttcaagtgttattgggagggagaatgatagggaagaaattatcaagcttctgatgcaaccacgtcctcaaggtgatggagacg |
35994975 |
T |
|
| Q |
412 |
gtgataaaagtttgtgtgttatt |
434 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
35994974 |
gtgataaaagtttgtgtgttatt |
35994952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 379 - 448
Target Start/End: Complemental strand, 35939622 - 35939553
Alignment:
| Q |
379 |
tgatgcagccacatcctcaaggtgatgctgatggtgataaaagtttgtgtgttattcccatagtgggaat |
448 |
Q |
| |
|
||||||| ||||||||||| ||||||| |||||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
35939622 |
tgatgcaaccacatcctcacggtgatggtgatggtgataaaagtttatgtgttattcccattgtgggaat |
35939553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 35926380 - 35926280
Alignment:
| Q |
12 |
catgggctgtgtgaatggctgaggcagattcaatacatttgctctgatgctgaatatgtactggatggattt---gaatttcaagacaaacgaaagcaag |
108 |
Q |
| |
|
|||||| || ||||||||||||||||||||||| | || |||| |||||||||| ||||| ||||||||||| || || |||||||| |||||||||| |
|
|
| T |
35926380 |
catggggtgcgtgaatggctgaggcagattcaaaatatatgctatgatgctgaagatgtaatggatggatttgacgacttgcaagacaagcgaaagcaag |
35926281 |
T |
|
| Q |
109 |
t |
109 |
Q |
| |
|
| |
|
|
| T |
35926280 |
t |
35926280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 366 - 448
Target Start/End: Complemental strand, 35958293 - 35958211
Alignment:
| Q |
366 |
attatcaagcttttgatgcagccacatcctcaaggtgatgctgatggtgataaaagtttgtgtgttattcccatagtgggaat |
448 |
Q |
| |
|
|||||||| |||||||||||||||||||||| || |||| |||||||||||| ||| | ||||| ||||| ||||||||||| |
|
|
| T |
35958293 |
attatcaatcttttgatgcagccacatcctcgcggagatggtgatggtgataatagtctctgtgtcattccaatagtgggaat |
35958211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 406 - 440
Target Start/End: Complemental strand, 35955302 - 35955268
Alignment:
| Q |
406 |
ctgatggtgataaaagtttgtgtgttattcccata |
440 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| |
|
|
| T |
35955302 |
ctgatggagataaaagtttgtgtgttattcccata |
35955268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 23 - 448
Target Start/End: Complemental strand, 18126344 - 18125919
Alignment:
| Q |
23 |
tgaatggctgaggcagattcaatacatttgctctgatgctgaatatgtactggatggatttgaatttcaagacaaacgaaagcaagttgtggaagcttca |
122 |
Q |
| |
|
|||||||| ||||||||| ||| | || |||| |||||||||| ||||| |||| |||||| | ||| |||| |||||||||||| | ||||||| |
|
|
| T |
18126344 |
tgaatggcggaggcagatacaaaatatctgctatgatgctgaagatgtattggaaaaatttgagctccaacacaagcgaaagcaagttctcaaagcttcg |
18126245 |
T |
|
| Q |
123 |
tgcagcactaggatgaaggtacgccaannnnnnncttcctctagtccacttgctttccgttttaagatggcatgtcgaatcaaagagattagggatagat |
222 |
Q |
| |
|
|| || | ||| |||||||||||||| |||||| | | |||||||||| ||| ||| ||||||| | ||| ||||| ||||||||||||| |
|
|
| T |
18126244 |
tgtagtaatagaatgaaggtacgccacttcttctgttcctccaattcacttgcttttcgtcttaggatggcaaaacaaattaaagatattagggatagat |
18126145 |
T |
|
| Q |
223 |
tgaataaggtggcagctgatgggactaggtttggacttgcagcaattagtgttgatttaggacttgctgtgcagaagagagaaatgactcattcccacgt |
322 |
Q |
| |
|
|| ||||||| ||| | |||||||||| ||||||||||||| | |||| ||||||| |||| |||||| ||||| ||||||||| || | | || |
|
|
| T |
18126144 |
tggataaggtagcaaccgatgggactaagtttggacttgcaactattaatgttgatcccagactcattgtgcaaaagagggaaatgacttatcctgatgt |
18126045 |
T |
|
| Q |
323 |
tgatgcttcagatgtgataggaagggagaatgagaggaatgatattatcaagcttttgatgcagccacatcctcaaggtgatgctgatggtgataaaagt |
422 |
Q |
| |
|
|||||||| ||| |||||||| |||| ||| ||| | || |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |
|
|
| T |
18126044 |
tgatgctttgagtgtaataggaagagagagtgatagggaagagattatcaagcttttgatgcaagcacatcctcatggtgatggtgatggtgataaaagt |
18125945 |
T |
|
| Q |
423 |
ttgtgtgttattcccatagtgggaat |
448 |
Q |
| |
|
| | |||||||||||| |||||||| |
|
|
| T |
18125944 |
ctatctgttattcccatggtgggaat |
18125919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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