View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18993_low_60 (Length: 343)
Name: NF18993_low_60
Description: NF18993
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18993_low_60 |
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Alignment Details
Target: chr8 (Bit Score: 290; Significance: 1e-163; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 11 - 328
Target Start/End: Original strand, 8651485 - 8651802
Alignment:
| Q |
11 |
cacagagaatccagtattgaaaaagtacagtttggttttctatcgaggtagttcaggttcggttcagaaccacataactggtgaaccaaaccattatagt |
110 |
Q |
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| T |
8651485 |
cacaaagaatccagtattgaaaaagtacagtttggttttctatcgaggtagttcaggttcggttcagaaccacataactggtgaaccaaaccattatagt |
8651584 |
T |
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| Q |
111 |
agtatggttcaggacgaacaattagcggttgagttcagttttaccaaactgttggaatggttcagttcggttttcttcctaaatcaaactaatagaatat |
210 |
Q |
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| T |
8651585 |
agtttggttcaggacgaacaattagtggtttagctcagttttaccaaactgttggaatggttcagttcggttttcttcctaaatcaaactattagaatat |
8651684 |
T |
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| Q |
211 |
aaaataggaagtgttgatgaaacttacagcgaaaatagtagcatgaccaggatcagcaaggtgagcaaaaaggttatcaataggaccagtgccggtgtaa |
310 |
Q |
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| T |
8651685 |
aaaataggaggtgttgatgaaacttacagcgaaaatagtagcatgaccaggatcagcaaggtgagcaaaaaggttatcaataggaccagtgccggtgtaa |
8651784 |
T |
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| Q |
311 |
atgtgctggaaccaagct |
328 |
Q |
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| T |
8651785 |
atgtgctggaaccaagct |
8651802 |
T |
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