View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18993_low_91 (Length: 275)
Name: NF18993_low_91
Description: NF18993
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18993_low_91 |
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Alignment Details
Target: chr8 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 18 - 266
Target Start/End: Original strand, 21188431 - 21188679
Alignment:
| Q |
18 |
actagatatatccaagatacatcttctgtttgacaaactaagagattcattttacattaatttggagaagtttccttcctatggcaatcaccatttcaag |
117 |
Q |
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| T |
21188431 |
actagatatatccaagatacatcttctgtttgagaaactaagagattcattttacattaatttggagaagtttccttcctatggcaatcaccatttcaag |
21188530 |
T |
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| Q |
118 |
cacgttgctactcagctccaagctaagtgctaagtggcaatactctaagagaccatacatgataaataacgtggaagtcgtgtgggtttaaaatgttaag |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
21188531 |
cacgttgctactcagctccaagctaagtgctaagtggcaatactctaagagaccatacatgataaataacgtggaaatcgtgtgggtttaaaatgttaag |
21188630 |
T |
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| Q |
218 |
gaccatgaaaggaactcctacaaaagaccttccattcttatgcctatgc |
266 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21188631 |
gaccatgaaaggaactcctacaaaagaccttccattcttatgcctatgc |
21188679 |
T |
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