View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18995_high_16 (Length: 323)

Name: NF18995_high_16
Description: NF18995
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18995_high_16
NF18995_high_16
[»] chr2 (45 HSPs)
chr2 (8-140)||(3409188-3409320)
chr2 (2-136)||(24844670-24844804)
chr2 (1-137)||(44740486-44740622)
chr2 (12-134)||(41332243-41332365)
chr2 (1-140)||(9963760-9963899)
chr2 (1-140)||(27634672-27634811)
chr2 (1-140)||(33831496-33831635)
chr2 (1-141)||(36538657-36538797)
chr2 (2-99)||(2578081-2578178)
chr2 (14-130)||(17616281-17616397)
chr2 (28-140)||(27902439-27902551)
chr2 (1-140)||(11027909-11028048)
chr2 (1-140)||(40458922-40459061)
chr2 (1-139)||(30713157-30713295)
chr2 (1-137)||(11006977-11007111)
chr2 (1-138)||(26436355-26436491)
chr2 (8-141)||(41959151-41959284)
chr2 (14-141)||(27464571-27464698)
chr2 (10-140)||(33163980-33164110)
chr2 (1-142)||(34116171-34116312)
chr2 (29-140)||(20203714-20203825)
chr2 (1-128)||(34064706-34064833)
chr2 (51-140)||(29806957-29807046)
chr2 (13-139)||(2646975-2647101)
chr2 (10-136)||(17368994-17369119)
chr2 (2-96)||(38409615-38409709)
chr2 (246-308)||(33852821-33852885)
chr2 (45-140)||(40680255-40680349)
chr2 (10-140)||(16544016-16544146)
chr2 (10-131)||(45383147-45383268)
chr2 (1-96)||(13829879-13829974)
chr2 (9-99)||(14103276-14103366)
chr2 (51-140)||(28968871-28968960)
chr2 (10-86)||(1094467-1094543)
chr2 (1-91)||(19589824-19589913)
chr2 (10-130)||(10412450-10412570)
chr2 (155-226)||(12890347-12890417)
chr2 (14-80)||(17503437-17503503)
chr2 (1-135)||(39690171-39690296)
chr2 (51-131)||(9753157-9753237)
chr2 (13-140)||(18667764-18667891)
chr2 (30-85)||(41880841-41880896)
chr2 (11-65)||(36799097-36799151)
chr2 (8-42)||(40680229-40680263)
chr2 (40-109)||(31000880-31000949)
[»] chr3 (45 HSPs)
chr3 (1-140)||(9505121-9505260)
chr3 (9-140)||(25253711-25253842)
chr3 (1-140)||(52199430-52199569)
chr3 (9-140)||(52934821-52934952)
chr3 (10-140)||(12710712-12710842)
chr3 (1-134)||(28242584-28242717)
chr3 (9-140)||(54393443-54393574)
chr3 (1-134)||(39942806-39942939)
chr3 (5-140)||(33438731-33438866)
chr3 (2-141)||(39135356-39135495)
chr3 (1-140)||(32689170-32689309)
chr3 (10-140)||(30662131-30662261)
chr3 (9-140)||(19560774-19560905)
chr3 (1-140)||(39469531-39469670)
chr3 (1-140)||(40943562-40943701)
chr3 (13-139)||(26049541-26049667)
chr3 (1-134)||(41609889-41610021)
chr3 (21-141)||(30743593-30743713)
chr3 (10-140)||(20550202-20550332)
chr3 (1-130)||(1674630-1674759)
chr3 (9-140)||(44574535-44574666)
chr3 (2-138)||(23206310-23206445)
chr3 (10-140)||(46293213-46293343)
chr3 (8-131)||(18074584-18074707)
chr3 (2-132)||(28687074-28687204)
chr3 (34-146)||(45714730-45714842)
chr3 (1-79)||(50965404-50965483)
chr3 (1-79)||(51068539-51068618)
chr3 (62-141)||(54432176-54432255)
chr3 (9-119)||(15822370-15822480)
chr3 (10-136)||(26136343-26136469)
chr3 (39-140)||(38643546-38643647)
chr3 (1-57)||(52199390-52199446)
chr3 (18-103)||(33691953-33692038)
chr3 (25-139)||(55203066-55203182)
chr3 (10-140)||(55452670-55452799)
chr3 (1-77)||(5418679-5418755)
chr3 (12-79)||(18652512-18652579)
chr3 (53-121)||(48730856-48730924)
chr3 (14-125)||(31589636-31589747)
chr3 (1-48)||(53529682-53529729)
chr3 (19-101)||(1072748-1072830)
chr3 (1-99)||(28700998-28701096)
chr3 (11-101)||(36917862-36917952)
chr3 (19-88)||(25582616-25582685)
[»] chr7 (66 HSPs)
chr7 (8-140)||(33124708-33124840)
chr7 (1-141)||(22075069-22075209)
chr7 (1-134)||(10618927-10619060)
chr7 (9-140)||(23226999-23227130)
chr7 (9-140)||(23236152-23236283)
chr7 (1-140)||(44421901-44422041)
chr7 (1-140)||(33935514-33935653)
chr7 (1-140)||(222226-222365)
chr7 (9-140)||(33171534-33171665)
chr7 (1-139)||(18249994-18250132)
chr7 (1-149)||(7447882-7448030)
chr7 (1-141)||(37334284-37334424)
chr7 (1-140)||(5776130-5776269)
chr7 (10-140)||(46573612-46573742)
chr7 (10-131)||(48634462-48634583)
chr7 (1-140)||(3942182-3942321)
chr7 (1-140)||(5794936-5795075)
chr7 (1-140)||(43052878-43053017)
chr7 (10-140)||(17025361-17025491)
chr7 (10-140)||(18740218-18740348)
chr7 (10-140)||(33898944-33899074)
chr7 (8-140)||(665847-665979)
chr7 (13-141)||(36472457-36472585)
chr7 (1-140)||(21760583-21760722)
chr7 (1-140)||(26719821-26719960)
chr7 (45-139)||(41449790-41449884)
chr7 (1-131)||(45176251-45176381)
chr7 (10-140)||(49034224-49034354)
chr7 (1-136)||(3930720-3930855)
chr7 (1-140)||(28949758-28949897)
chr7 (1-139)||(36927005-36927143)
chr7 (2-140)||(2466516-2466655)
chr7 (1-140)||(42072089-42072228)
chr7 (14-140)||(32356980-32357106)
chr7 (1-141)||(48505794-48505927)
chr7 (1-140)||(20401002-20401141)
chr7 (10-140)||(11595796-11595926)
chr7 (27-140)||(35543556-35543669)
chr7 (8-141)||(37401565-37401698)
chr7 (1-134)||(45055734-45055867)
chr7 (2-141)||(10096478-10096617)
chr7 (15-137)||(33019321-33019443)
chr7 (22-140)||(37106853-37106971)
chr7 (1-140)||(17608718-17608854)
chr7 (37-130)||(33140812-33140905)
chr7 (1-140)||(26216278-26216410)
chr7 (10-126)||(29037794-29037910)
chr7 (1-140)||(40480050-40480190)
chr7 (51-134)||(24128506-24128589)
chr7 (13-136)||(31491833-31491956)
chr7 (22-140)||(27231539-27231657)
chr7 (1-88)||(29527392-29527483)
chr7 (37-134)||(388988-389085)
chr7 (40-135)||(32245443-32245538)
chr7 (1-67)||(15434249-15434315)
chr7 (7-140)||(46652633-46652766)
chr7 (1-68)||(37250040-37250107)
chr7 (102-140)||(15434312-15434350)
chr7 (1-79)||(23237578-23237656)
chr7 (13-91)||(49001035-49001113)
chr7 (1-92)||(30919428-30919519)
chr7 (37-131)||(1081214-1081308)
chr7 (10-72)||(37239848-37239910)
chr7 (18-79)||(28759439-28759500)
chr7 (1-42)||(41449757-41449798)
chr7 (13-77)||(37101162-37101225)
[»] chr4 (77 HSPs)
chr4 (9-140)||(26632945-26633076)
chr4 (1-140)||(22184504-22184643)
chr4 (9-140)||(11055226-11055357)
chr4 (13-140)||(48151126-48151253)
chr4 (1-134)||(51995079-51995212)
chr4 (1-140)||(52813602-52813741)
chr4 (8-137)||(27891395-27891523)
chr4 (2-140)||(50146918-50147056)
chr4 (10-134)||(12673034-12673158)
chr4 (1-140)||(12789552-12789691)
chr4 (1-140)||(53369873-53370012)
chr4 (1-131)||(36156303-36156433)
chr4 (36-140)||(38791728-38791831)
chr4 (8-140)||(48731173-48731305)
chr4 (1-140)||(48977577-48977716)
chr4 (1-140)||(50606009-50606148)
chr4 (1-139)||(19455159-19455297)
chr4 (1-143)||(40797831-40797973)
chr4 (9-141)||(80506-80638)
chr4 (1-140)||(21441582-21441721)
chr4 (13-140)||(46944544-46944671)
chr4 (13-140)||(56224158-56224285)
chr4 (31-140)||(4274556-4274665)
chr4 (8-140)||(15697083-15697215)
chr4 (1-141)||(36543782-36543922)
chr4 (1-140)||(9469778-9469917)
chr4 (1-140)||(19852979-19853118)
chr4 (1-140)||(45674836-45674975)
chr4 (9-140)||(49405635-49405766)
chr4 (25-106)||(13761824-13761905)
chr4 (1-140)||(28265673-28265809)
chr4 (11-134)||(9222138-9222259)
chr4 (1-140)||(51407949-51408088)
chr4 (2-140)||(48339099-48339237)
chr4 (13-131)||(52733710-52733827)
chr4 (1-140)||(9959344-9959471)
chr4 (1-141)||(24007902-24008042)
chr4 (8-144)||(34718147-34718283)
chr4 (1-140)||(13455702-13455841)
chr4 (8-127)||(44791256-44791375)
chr4 (1-140)||(55891985-55892124)
chr4 (54-140)||(43387311-43387397)
chr4 (5-128)||(34980516-34980639)
chr4 (1-141)||(6866108-6866242)
chr4 (9-140)||(48802475-48802607)
chr4 (1-140)||(22721329-22721467)
chr4 (1-140)||(52706218-52706357)
chr4 (1-139)||(7505530-7505668)
chr4 (1-99)||(43812098-43812196)
chr4 (1-140)||(16742337-16742464)
chr4 (1-78)||(49820983-49821060)
chr4 (1-140)||(1803499-1803633)
chr4 (1-72)||(25134575-25134646)
chr4 (1-141)||(44378251-44378379)
chr4 (8-131)||(49083243-49083366)
chr4 (1-131)||(32397707-32397837)
chr4 (51-141)||(36643984-36644073)
chr4 (12-79)||(5762606-5762673)
chr4 (12-79)||(5769176-5769243)
chr4 (1-131)||(28470820-28470949)
chr4 (11-79)||(5764634-5764702)
chr4 (11-79)||(5766878-5766946)
chr4 (19-79)||(41857153-41857213)
chr4 (5-73)||(53520676-53520744)
chr4 (1-60)||(15564194-15564253)
chr4 (1-60)||(15576841-15576900)
chr4 (45-140)||(38492988-38493083)
chr4 (5-132)||(39736688-39736815)
chr4 (1-108)||(43798255-43798362)
chr4 (42-136)||(9874212-9874306)
chr4 (1-45)||(53369689-53369733)
chr4 (12-79)||(5728742-5728809)
chr4 (91-140)||(50710784-50710833)
chr4 (103-141)||(25134665-25134703)
chr4 (13-70)||(50710840-50710897)
chr4 (10-70)||(25102667-25102727)
chr4 (14-86)||(50137407-50137479)
[»] chr6 (28 HSPs)
chr6 (2-140)||(1501850-1501988)
chr6 (1-140)||(4441301-4441440)
chr6 (1-140)||(3081718-3081857)
chr6 (1-140)||(5640252-5640391)
chr6 (10-140)||(17441168-17441298)
chr6 (1-141)||(10961795-10961935)
chr6 (1-140)||(13312023-13312164)
chr6 (1-140)||(6999268-6999407)
chr6 (1-140)||(7437305-7437444)
chr6 (1-140)||(11460014-11460145)
chr6 (1-140)||(10346722-10346861)
chr6 (1-94)||(32163542-32163635)
chr6 (1-140)||(9950760-9950899)
chr6 (10-137)||(33110468-33110595)
chr6 (1-131)||(18095520-18095650)
chr6 (1-131)||(18099817-18099947)
chr6 (9-134)||(12428896-12429010)
chr6 (1-99)||(27984931-27985029)
chr6 (20-134)||(9463360-9463474)
chr6 (49-118)||(8596858-8596927)
chr6 (57-140)||(8200688-8200771)
chr6 (25-127)||(17507282-17507384)
chr6 (12-73)||(22295928-22295989)
chr6 (8-43)||(13355722-13355757)
chr6 (2-60)||(2962782-2962840)
chr6 (53-126)||(10474363-10474435)
chr6 (11-67)||(2156010-2156066)
chr6 (19-83)||(26263845-26263909)
[»] chr5 (49 HSPs)
chr5 (1-140)||(1840687-1840826)
chr5 (1-131)||(19282123-19282253)
chr5 (1-140)||(3801364-3801503)
chr5 (1-130)||(39414182-39414312)
chr5 (1-141)||(27906099-27906239)
chr5 (8-121)||(40056382-40056495)
chr5 (9-140)||(15933169-15933303)
chr5 (8-140)||(31021871-31022003)
chr5 (1-140)||(27196078-27196217)
chr5 (9-140)||(32945021-32945152)
chr5 (1-140)||(38522861-38523000)
chr5 (1-141)||(27450580-27450720)
chr5 (1-140)||(10493986-10494125)
chr5 (1-136)||(18880193-18880328)
chr5 (1-140)||(31620869-31621008)
chr5 (1-140)||(20188974-20189113)
chr5 (1-140)||(26218048-26218187)
chr5 (1-140)||(29328045-29328183)
chr5 (1-140)||(39407407-39407546)
chr5 (1-140)||(41783326-41783465)
chr5 (1-140)||(34719657-34719796)
chr5 (10-140)||(26298321-26298451)
chr5 (1-137)||(14500709-14500845)
chr5 (1-140)||(10327931-10328070)
chr5 (23-134)||(20190591-20190701)
chr5 (22-140)||(2676038-2676156)
chr5 (11-137)||(26299858-26299984)
chr5 (10-140)||(34724754-34724884)
chr5 (2-140)||(34857349-34857487)
chr5 (11-140)||(19716194-19716318)
chr5 (54-140)||(5382825-5382911)
chr5 (14-130)||(24536021-24536137)
chr5 (1-106)||(11136041-11136145)
chr5 (51-140)||(28431106-28431194)
chr5 (10-126)||(3457836-3457956)
chr5 (1-136)||(17168447-17168584)
chr5 (10-128)||(30660919-30661037)
chr5 (11-96)||(1225362-1225447)
chr5 (19-128)||(24202721-24202830)
chr5 (63-140)||(28247473-28247550)
chr5 (1-140)||(1091125-1091263)
chr5 (1-140)||(32156946-32157076)
chr5 (1-79)||(34723714-34723792)
chr5 (1-140)||(36523752-36523895)
chr5 (45-140)||(43386761-43386858)
chr5 (83-140)||(39409209-39409266)
chr5 (13-88)||(5028905-5028980)
chr5 (65-118)||(32670374-32670427)
chr5 (1-66)||(39409141-39409206)
[»] chr1 (65 HSPs)
chr1 (10-140)||(44596527-44596657)
chr1 (9-140)||(15306502-15306633)
chr1 (1-132)||(23915605-23915736)
chr1 (9-140)||(35810727-35810858)
chr1 (10-140)||(45581008-45581138)
chr1 (9-140)||(31869603-31869734)
chr1 (10-140)||(28006360-28006490)
chr1 (31-140)||(12224575-12224684)
chr1 (1-141)||(50447342-50447482)
chr1 (1-140)||(24469817-24469956)
chr1 (10-141)||(24575919-24576050)
chr1 (1-140)||(32179859-32179998)
chr1 (9-140)||(39802767-39802898)
chr1 (1-142)||(25124883-25125024)
chr1 (1-140)||(29677519-29677658)
chr1 (1-140)||(36419102-36419241)
chr1 (1-140)||(47602862-47603001)
chr1 (2-140)||(7702837-7702975)
chr1 (1-136)||(3577671-3577807)
chr1 (9-140)||(14101871-14102003)
chr1 (20-140)||(21680656-21680776)
chr1 (10-130)||(5204479-5204599)
chr1 (11-131)||(45653441-45653560)
chr1 (22-141)||(14578584-14578703)
chr1 (1-140)||(42916114-42916253)
chr1 (1-140)||(42937075-42937214)
chr1 (9-131)||(31816577-31816699)
chr1 (19-140)||(7016075-7016196)
chr1 (1-140)||(36119073-36119211)
chr1 (1-140)||(37441186-37441325)
chr1 (1-140)||(46264944-46265083)
chr1 (1-131)||(7596394-7596524)
chr1 (42-140)||(7841665-7841762)
chr1 (1-143)||(7995972-7996114)
chr1 (10-140)||(15257171-15257301)
chr1 (1-134)||(40159636-40159769)
chr1 (24-140)||(15014339-15014455)
chr1 (13-140)||(30251437-30251565)
chr1 (33-140)||(6413272-6413379)
chr1 (53-140)||(20903949-20904036)
chr1 (1-140)||(23916811-23916950)
chr1 (1-140)||(27076515-27076654)
chr1 (1-140)||(38061178-38061317)
chr1 (1-140)||(48575080-48575219)
chr1 (10-144)||(47983265-47983399)
chr1 (1-97)||(51432246-51432342)
chr1 (1-140)||(7956325-7956464)
chr1 (8-131)||(20347674-20347797)
chr1 (8-131)||(20349154-20349277)
chr1 (10-131)||(19508538-19508659)
chr1 (22-137)||(15662971-15663086)
chr1 (51-134)||(51432144-51432227)
chr1 (10-136)||(14796598-14796724)
chr1 (10-136)||(14805472-14805598)
chr1 (1-140)||(43087466-43087605)
chr1 (2-120)||(11991274-11991392)
chr1 (25-130)||(29113535-29113640)
chr1 (1-76)||(14770580-14770655)
chr1 (43-108)||(14725354-14725419)
chr1 (6-86)||(28020598-28020678)
chr1 (10-73)||(13645247-13645310)
chr1 (13-63)||(8828303-8828353)
chr1 (1-119)||(33233574-33233689)
chr1 (173-245)||(42243195-42243267)
chr1 (1-66)||(40002895-40002960)
[»] chr8 (22 HSPs)
chr8 (9-140)||(3307943-3308074)
chr8 (8-140)||(9412524-9412656)
chr8 (1-130)||(32740640-32740769)
chr8 (1-140)||(453484-453623)
chr8 (1-134)||(11161573-11161706)
chr8 (1-141)||(33279976-33280116)
chr8 (37-132)||(43384831-43384926)
chr8 (40-140)||(39478090-39478190)
chr8 (1-132)||(34516139-34516270)
chr8 (11-140)||(9135963-9136092)
chr8 (1-130)||(27189092-27189221)
chr8 (1-99)||(23181156-23181254)
chr8 (1-141)||(34655036-34655176)
chr8 (1-140)||(1091728-1091867)
chr8 (1-140)||(43967511-43967650)
chr8 (11-141)||(22564017-22564147)
chr8 (9-140)||(24854608-24854739)
chr8 (37-140)||(12378389-12378492)
chr8 (11-94)||(35058318-35058401)
chr8 (39-140)||(17865388-17865489)
chr8 (37-92)||(43955884-43955939)
chr8 (1-47)||(10749312-10749358)
[»] scaffold0025 (1 HSPs)
scaffold0025 (9-142)||(11399-11532)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-142)||(21089-21229)
[»] scaffold0316 (1 HSPs)
scaffold0316 (1-140)||(19297-19436)
[»] scaffold0223 (1 HSPs)
scaffold0223 (9-140)||(14435-14566)
[»] scaffold0224 (1 HSPs)
scaffold0224 (1-140)||(7308-7447)
[»] scaffold0135 (1 HSPs)
scaffold0135 (11-134)||(32791-32912)
[»] scaffold0204 (1 HSPs)
scaffold0204 (2-140)||(26621-26759)
[»] scaffold0022 (1 HSPs)
scaffold0022 (8-134)||(124487-124613)
[»] scaffold0260 (2 HSPs)
scaffold0260 (8-131)||(9997-10120)
scaffold0260 (8-131)||(11477-11600)
[»] scaffold0444 (1 HSPs)
scaffold0444 (1-141)||(778-906)
[»] scaffold0063 (1 HSPs)
scaffold0063 (1-132)||(51310-51441)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-140)||(96281-96420)
[»] scaffold0954 (1 HSPs)
scaffold0954 (1-79)||(245-323)
[»] scaffold0192 (1 HSPs)
scaffold0192 (1-141)||(25566-25704)


Alignment Details
Target: chr2 (Bit Score: 129; Significance: 9e-67; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 8 - 140
Target Start/End: Complemental strand, 3409320 - 3409188
Alignment:
Q  8 agctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaacta 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3409320 agctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaacta 3409221  T
Q  108 ttatcgagttggttcggttcattgccagcccta 140  Q
    || ||||||||||||||||||||||||||||||    
T  3409220 ttgtcgagttggttcggttcattgccagcccta 3409188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 24844804 - 24844670
Alignment:
Q  2 aagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttc 101  Q
    ||||| |||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  24844804 aagttcagctcatttatttatcgaatttaattttcagctcaagttcagctcatttggttcatgaaccaagttcaacgagataattgccgaatcgagtttc 24844705  T
Q  102 gaactattatcgagttggttcggttcattgccagc 136  Q
    ||||||||||||||||||||||| |||||| ||||    
T  24844704 gaactattatcgagttggttcggatcattgtcagc 24844670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 44740622 - 44740486
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| ||||||||| |||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||      
T  44740622 caagttcagctcatttgtttaacgaacttaatttttagctcaagttcagctcgtttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtcc 44740523  T
Q  101 cgaactattatcgagttggttcggttcattgccagcc 137  Q
    | ||||||| |||||||||||||||||||||||||||    
T  44740522 caaactattgtcgagttggttcggttcattgccagcc 44740486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 12 - 134
Target Start/End: Original strand, 41332243 - 41332365
Alignment:
Q  12 catttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattat 111  Q
    |||||||||||| ||||||||||||||||||| ||||  ||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||  |    
T  41332243 catttatttaacaaacttaattttcagctcaaattcaactcaattggtttatgaaccaagttcaacaagttaattgtcgaatcgagtttcgaactatatt 41332342  T
Q  112 cgagttggttcggttcattgcca 134  Q
    |||||||||| ||||||||||||    
T  41332343 cgagttggtttggttcattgcca 41332365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 9963760 - 9963899
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| ||||||||||| |||||||||||||||| | || |||||||| |||||||||||||||||| ||||||||||||||||||||||||  |||||    
T  9963760 caagttcagctcatttatctaacgaacttaatttttaacttaagttcagctcatttggttcatgaacccagttcaacgagttaattgtcgaattaagttt 9963859  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||| |||||| || |||  |||||||||||| |||||||    
T  9963860 cgaattattattgaattgactcggttcattgctagcccta 9963899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 27634672 - 27634811
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| ||| || || ||||||||||| ||||||||||  |||| | |||| |||| | |    
T  27634672 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaactaagttcaacggattaaatatcgagtcgaatgt 27634771  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  27634772 cgaactataatcgagttggttcggttcattgccagcccta 27634811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 33831496 - 33831635
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| ||| || || |||||||||||||| |||||||  |||  | |||| |||| | |    
T  33831496 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaaattcaacggattagatatcgagtcgaatgt 33831595  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  33831596 cgaactataatcgagttggttcggttcattgccagcccta 33831635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 36538657 - 36538797
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||  || || ||||||||||||||||||||||  |||  | |||| |||| | |    
T  36538657 caagtttagctcatttaattaacgaacttaattttcagctcaagtccaactcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgt 36538756  T
Q  101 cgaactattatcgagttggttcggttcattgccagccctat 141  Q
    |||||||| |||||||||||| ||||||||| |||||||||    
T  36538757 cgaactataatcgagttggtttggttcattgtcagccctat 36538797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 2578081 - 2578178
Alignment:
Q  2 aagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtt 99  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||| |||||||||| |||||||||||| ||||||||    
T  2578081 aagtttaactcatttatttaacgaatttaattttcagctcaagttcagctcatttgattcatgaatcaagttcaacaagttaattgtcgcatcgagtt 2578178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 17616281 - 17616397
Alignment:
Q  14 tttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcg 113  Q
    |||| |||| |||||||||||| ||||||||||| | |||||||||||||| | ||| ||||||||| |||||||||||||||||||| ||||||| |||    
T  17616281 tttagttaatgaacttaatttttagctcaagttcggctcatttggttcatgtatcaaattcaacgagataattgtcgaatcgagtttctaactattttcg 17616380  T
Q  114 agttggttcggttcatt 130  Q
    |||||||||| ||||||    
T  17616381 agttggttcgattcatt 17616397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 28 - 140
Target Start/End: Complemental strand, 27902551 - 27902439
Alignment:
Q  28 ttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggttc 127  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||| |||| | |||||||||||||| || |||||| | ||||||||||||||||||    
T  27902551 ttaattttcagctcaagttcggttcattttgttcatgaaccaagttcgacgaatcaattgtcgaatcgatttacgaactttaatcgagttggttcggttc 27902452  T
Q  128 attgccagcccta 140  Q
    | || ||||||||    
T  27902451 aatgtcagcccta 27902439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 11027909 - 11028048
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||| ||| || |||||||||||||| || |||||||| | |||||||||||||||||||||||| |||| | |||| |||||| || ||     
T  11027909 caagttcagctcaattagttgacgaacttaatttttagttcaagttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaattgaatta 11028008  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||| | || ||||||||||||||||||||||||||||    
T  11028009 cgaactctaattgagttggttcggttcattgccagcccta 11028048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 40458922 - 40459061
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||||||||||| ||||||||||| |||||||||   ||||||||||| ||||||||||||||| |   |||| | ||||||||| |    
T  40458922 caagttcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacaaaccaattattgaatcgagtat 40459021  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    | ||||||| || |||||||||||||||||| ||||||||    
T  40459022 caaactattttcaagttggttcggttcattgtcagcccta 40459061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 30713157 - 30713295
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||| ||| || |||||||||| |||||||||| |||| | |||||||||||||||||||||||| |||| | |||| ||||||||| ||     
T  30713157 caagttcaactcaattagttgacgaacttaaatttcagctcatgttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaatcgaatta 30713256  T
Q  101 cgaactattatcgagttggttcggttcattgccagccct 139  Q
    |||||  | ||||||||||||||||||||||||||||||    
T  30713257 cgaacactaatcgagttggttcggttcattgccagccct 30713295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 11007111 - 11006977
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||||||||||||||| ||||||||||| |||||||||   ||||||||||| ||||||||||||||||| | |||| ||| ||||||  |    
T  11007111 caagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgaatcaattatcggatcgag--t 11007014  T
Q  101 cgaactattatcgagttggttcggttcattgccagcc 137  Q
    | ||||||| ||||||||||||||||||||| |||||    
T  11007013 caaactattttcgagttggttcggttcattgtcagcc 11006977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 26436355 - 26436491
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| |||||||||||||||||||||||| |||||| || || ||||||||||||||||||||||  |||| | |||| |||| | |    
T  26436355 caagttcagctcatttaattaacgaacttaattttcagctcacgttcagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 26436454  T
Q  101 cgaactattatcgagttggttcggttcattgccagccc 138  Q
    | || ||| |||||||||||||||||||||||| ||||    
T  26436455 c-aattataatcgagttggttcggttcattgccggccc 26436491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 8 - 141
Target Start/End: Original strand, 41959151 - 41959284
Alignment:
Q  8 agctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaacta 107  Q
    |||||||||| ||||||||||||||||||||||||||| ||| || || |||||||||| |||||||||||  |||  | |||| |||| | ||||||||    
T  41959151 agctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaatcaagttcaacggattagatatcgagtcgaatgtcgaacta 41959250  T
Q  108 ttatcgagttggttcggttcattgccagccctat 141  Q
    | ||||||||| |||||||||||| |||||||||    
T  41959251 taatcgagttgattcggttcattgtcagccctat 41959284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 27464698 - 27464571
Alignment:
Q  14 tttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcg 113  Q
    ||||||||  ||||||||||||||  ||||||||   |||||||||||||||||||| |||||| | | |||| ||||||| ||| |||||||||| |||    
T  27464698 tttatttagggaacttaattttcaattcaagttcgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcaagtctcgaactattttcg 27464599  T
Q  114 agttggttcggttcattgccagccctat 141  Q
    |||||||||||||||||| |||||||||    
T  27464598 agttggttcggttcattgtcagccctat 27464571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 33164110 - 33163980
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 109  Q
    |||||||| ||||||||||||||||||||||||||| ||| || || ||||||||||||||||||||||  |||  | |||| |||| | |||||||||     
T  33164110 ctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactata 33164011  T
Q  110 atcgagttggttcggttcattgccagcccta 140  Q
    ||||| ||||||||||||||| || ||||||    
T  33164010 atcgaattggttcggttcattaccggcccta 33163980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 34116312 - 34116171
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||| ||||||| ||||||||||||| ||||||||||| | ||||||||||||||||| |||||| || | | |||| |  |||||| ||     
T  34116312 caagttcagctcaattatttagcgaacttaattttaagctcaagttcggctcatttggttcatgaactaagttcgacaaatcaattattaaatcgaatta 34116213  T
Q  101 cgaactattatcgagttggttcggttcattgccagccctatc 142  Q
    |||||| | ||||||||||||||| ||||||||| |||||||    
T  34116212 cgaactctaatcgagttggttcggctcattgccacccctatc 34116171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 29 - 140
Target Start/End: Complemental strand, 20203825 - 20203714
Alignment:
Q  29 taattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggttca 128  Q
    |||||||||||||| |||    ||||||||||||||||||||||||||||| | |||||| ||||||| || |||||| | ||||||||||||||||| |    
T  20203825 taattttcagctcaggtttgactcatttggttcatgaaccaagttcaacgaatcaattgttgaatcgaattacgaactttaatcgagttggttcggttaa 20203726  T
Q  129 ttgccagcccta 140  Q
    |||| |||||||    
T  20203725 ttgctagcccta 20203714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 34064706 - 34064833
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| ||| || || ||||||||||| ||||||||||  |||  | | || |||| | |    
T  34064706 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaactaagttcaacggattagatattgagtcgaatgt 34064805  T
Q  101 cgaactattatcgagttggttcggttca 128  Q
    |||||||| || ||||||||||||||||    
T  34064806 cgaactataattgagttggttcggttca 34064833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 51 - 140
Target Start/End: Original strand, 29806957 - 29807046
Alignment:
Q  51 tcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggttcattgccagcccta 140  Q
    ||||||||||| | ||||||||||||||| | |||| ||||||||||| | |||||||| |||| |||||||||||||||||||||||||    
T  29806957 tcatttggttcgtaaaccaagttcaacgaatcaattatcgaatcgagtcttgaactattttcgaattggttcggttcattgccagcccta 29807046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 2647101 - 2646975
Alignment:
Q  13 atttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatc 112  Q
    ||||| ||||||||||||||||| ||||||||||| | || ||||||||||||||||||||||||||  |||||  ||| |||||||  ||||| |  |     
T  2647101 atttagttaacgaacttaatttttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagtcgagttctgaactttattt 2647002  T
Q  113 gagttggttcggttcattgccagccct 139  Q
    ||||||  ||||||||||||| |||||    
T  2647001 gagttgtatcggttcattgccggccct 2646975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 136
Target Start/End: Complemental strand, 17369119 - 17368994
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 109  Q
    |||||||| ||||| || |||||||||| |||||||||   ||||| ||||||| ||| || |||||||||||||||||||| | ||||| ||||||||     
T  17369119 ctcatttacttaacaaatttaattttcaactcaagttcgactcatt-ggttcataaactaaattcaacgagttaattgtcgagttgagttccgaactata 17369021  T
Q  110 atcgagttggttcggttcattgccagc 136  Q
     ||||||||| ||||||||||| ||||    
T  17369020 ttcgagttggctcggttcattgtcagc 17368994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 38409709 - 38409615
Alignment:
Q  2 aagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcga 96  Q
    ||||| |||||| ||| || || ||||||||||||||||||||||| | |||||||||||||||||||| ||| |||| | ||||||||||||||    
T  38409709 aagttcagctcaattagttcacaaacttaattttcagctcaagttcggctcatttggttcatgaaccaaattcgacgaatcaattgtcgaatcga 38409615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 246 - 308
Target Start/End: Complemental strand, 33852885 - 33852821
Alignment:
Q  246 atttatgtaggcgaggagacaccaaatgtagtgt--cttttattgaagatttgttgtgcaataat 308  Q
    ||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||    
T  33852885 atttatgtaggcgaggatacaccaaatgtagtgtgtcttttattgaagatttgttgtgcaataat 33852821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 140
Target Start/End: Original strand, 40680255 - 40680349
Alignment:
Q  45 ttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggttcattgccagcccta 140  Q
    ||||| ||||||| ||||| ||| || |||||||||| |||| ||||||||| || ||||||||||| ||||||||||||||||||||||| ||||    
T  40680255 ttcagctcatttgattcat-aactaaattcaacgagtcaattatcgaatcgaattccgaactattattgagttggttcggttcattgccagtccta 40680349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 16544016 - 16544146
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 109  Q
    |||||||||||||||||||||||||| | ||||| ||||  | ||||||||  ||||||||||||||| | |  ||| ||||||||||| | ||||| ||    
T  16544016 ctcatttatttaacgaacttaatttttaactcaaattcaaattatttggttggtgaaccaagttcaacaaatacattatcgaatcgagtcttgaactttt 16544115  T
Q  110 atcgagttggttcggttcattgccagcccta 140  Q
      ||||||| |||||||||||| ||| ||||    
T  16544116 tccgagttgcttcggttcattgtcagtccta 16544146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 45383268 - 45383147
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 109  Q
    |||||||| |||| ||| |||||||| ||||||| || ||  ||||||||||||||| |||||||| ||||| |||||| |||||||  |||||||||      
T  45383268 ctcatttaattaatgaaattaattttaagctcaaatttagcgcatttggttcatgaatcaagttcatcgagtcaattgttgaatcgaacttcgaactaaa 45383169  T
Q  110 atcgagttggttcggttcattg 131  Q
     || |||| |||||||||||||    
T  45383168 ttcaagttagttcggttcattg 45383147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 13829879 - 13829974
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcga 96  Q
    |||||| | |||||||| |||||||  |||||||| | ||||||||||  |||||||||| |||||||||||||||||| | |||| |||||||||    
T  13829879 caagttcaactcatttaattaacgagtttaatttttaactcaagttcaactcatttggtttatgaaccaagttcaacgaatcaattatcgaatcga 13829974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 14103276 - 14103366
Alignment:
Q  9 gctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtt 99  Q
    ||||||||| |||||||||||||||||||| | ||||||   | |||||| |||||||||||||| |||||||||||| | || |||||||    
T  14103276 gctcatttaattaacgaacttaattttcagtttaagttcgacttatttggctcatgaaccaagttaaacgagttaattattgagtcgagtt 14103366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 140
Target Start/End: Original strand, 28968871 - 28968960
Alignment:
Q  51 tcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||||||||| ||||  | ||||||||||||||| ||||||||||| || ||||||| ||| |||| || ||||||||| ||||||||    
T  28968871 tcatttggttcacgaactgaattcaacgagttaattatcgaatcgagtctcaaactattctcgggttgatttggttcattgtcagcccta 28968960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 1094467 - 1094543
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaatt 86  Q
    |||||||||| ||||| ||||||||||| |||||||||   |||||||||||||||||||| ||||| |||| ||||    
T  1094467 ctcatttattcaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaaattcaatgagtcaatt 1094543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 19589913 - 19589824
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcga 91  Q
    |||||| |||||||||| ||||| |||||| |||| || ||||||| |  |||||||||||||||| ||||||| || |||||||||||||    
T  19589913 caagttcagctcatttaattaacaaacttattttt-agttcaagtttatctcatttggttcatgaagcaagttccaccagttaattgtcga 19589824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 130
Target Start/End: Original strand, 10412450 - 10412570
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 109  Q
    |||||||||||||||| ||||||||| | |||||||||   |||| | ||| | ||||| | || |||||  |||||  |||||||| | ||||||||||    
T  10412450 ctcatttatttaacgagcttaatttttaactcaagttcgactcatctagtttacgaaccgaatttaacgaactaattaccgaatcgaatctcgaactatt 10412549  T
Q  110 atcgagttggttcggttcatt 130  Q
     ||||||||||| ||||||||    
T  10412550 ttcgagttggtttggttcatt 10412570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 12890417 - 12890347
Alignment:
Q  155 atgttttccgctcaacaatgaattatgattggttgattgcttattcggaatgatctcgtgatgctccccctc 226  Q
    |||| |||||| ||| | |||||| ||||||||||||||||||||| ||||||| ||| |||||||||||||    
T  12890417 atgtattccgcccaatagtgaattgtgattggttgattgcttattc-gaatgatttcgcgatgctccccctc 12890347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 17503437 - 17503503
Alignment:
Q  14 tttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgag 80  Q
    |||| ||||| ||||||||||||| ||||| |||  |||||||| || |||||||||||||||||||    
T  17503437 tttagttaacaaacttaattttcaactcaaattcgattcatttgtttaatgaaccaagttcaacgag 17503503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 39690171 - 39690296
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||| ||| || |||||||||||||||||||||||||         ||| |||||||| |||||| |||| | ||| || ||||||| ||     
T  39690171 caagttcaactcaattagttgacgaacttaattttcagctcaagtt---------tggctcatgaacaaagttcgacgaatcaatcgttgaatcgaatta 39690261  T
Q  101 cgaactattatcgagttggttcggttcattgccag 135  Q
    |||||||| ||| | ||||||||||||||||||||    
T  39690262 cgaactataatcaaattggttcggttcattgccag 39690296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 131
Target Start/End: Original strand, 9753157 - 9753237
Alignment:
Q  51 tcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggttcattg 131  Q
    ||||||||||||||||||||  | ||||| | |||||||||||||| | ||||||| |  |||| |||| |||||||||||    
T  9753157 tcatttggttcatgaaccaaacttaacgaatcaattgtcgaatcgaatctcgaactttgttcgacttggctcggttcattg 9753237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 140
Target Start/End: Original strand, 18667764 - 18667891
Alignment:
Q  13 atttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatc 112  Q
    |||||||||||||| ||||  || ||||||| ||  | || |||||||||||||||||||||||  |  |||||  ||| ||||||| |||||| |  |     
T  18667764 atttatttaacgaaattaagctttagctcaaattatgctcgtttggttcatgaaccaagttcaataaaataattaccgagtcgagttccgaactttattt 18667863  T
Q  113 gagttggttcggttcattgccagcccta 140  Q
    ||||||  |||||||||||| |||||||    
T  18667864 gagttgtatcggttcattgctagcccta 18667891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 41880841 - 41880896
Alignment:
Q  30 aattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaat 85  Q
    |||||| |||| ||||| |  ||||||||||||||||||||||||| |||||||||    
T  41880841 aatttttagcttaagttaaagtcatttggttcatgaaccaagttcagcgagttaat 41880896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 36799097 - 36799151
Alignment:
Q  11 tcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatga 65  Q
    ||||||| ||||| |||||| |||||| ||||||||  |||||||||||||||||    
T  36799097 tcatttaattaacaaacttatttttcaactcaagttatgttcatttggttcatga 36799151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 40680229 - 40680263
Alignment:
Q  8 agctcatttatttaacgaacttaattttcagctca 42  Q
    |||||||||||||||||||| ||||||||||||||    
T  40680229 agctcatttatttaacgaacataattttcagctca 40680263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 109
Target Start/End: Original strand, 31000880 - 31000949
Alignment:
Q  40 tcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 109  Q
    |||||||||  |||||||||||||||| |||||||| ||| ||||||  |||||||| | || |||||||    
T  31000880 tcaagttcaaatcatttggttcatgaatcaagttcatcgaattaattaccgaatcgaatctcaaactatt 31000949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 2e-61; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 9505260 - 9505121
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||     
T  9505260 caagttcagctcatttatttaacgaacttaattttcagctcaagttcaactcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttc 9505161  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  9505160 cgaactattgtcgagttggttcggttcattgccagcccta 9505121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 25253711 - 25253842
Alignment:
Q  9 gctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactat 108  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||| |||||||| ||||||| | ||||||    
T  25253711 gctcatttatttaacgaacttaatttttagctcaagttcagctcatttggttcatgaaccaagttcaacaagtttattgtcgagtcgagttccaaactat 25253810  T
Q  109 tatcgagttggttcggttcattgccagcccta 140  Q
      ||||||||||||||||||||||||||||||    
T  25253811 attcgagttggttcggttcattgccagcccta 25253842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 52199430 - 52199569
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||      
T  52199430 caagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgaattaattgtcgaatcgagtcc 52199529  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    | ||||||| ||||||||||||| ||||||| ||||||||    
T  52199530 caaactattgtcgagttggttcgattcattgtcagcccta 52199569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 52934821 - 52934952
Alignment:
Q  9 gctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactat 108  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||    
T  52934821 gctcatttatttaacgaacttaattttctgctcaagttcagctcatttggttcatgaaccaagttcaatgagttaattatcgaatcgagttccgaactat 52934920  T
Q  109 tatcgagttggttcggttcattgccagcccta 140  Q
    | || ||||||||| |||||||||||| ||||    
T  52934921 tgtcaagttggttcagttcattgccagaccta 52934952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 12710712 - 12710842
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 109  Q
    |||||||||||||||| ||||||||||| |||||||||   ||||||||||||||||||||||||||||||| |||| ||||||||| | ||||||||||    
T  12710712 ctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgagtcaattatcgaatcgaatctcgaactatt 12710811  T
Q  110 atcgagttggttcggttcattgccagcccta 140  Q
     ||||||||||||||||||||||||||||||    
T  12710812 ttcgagttggttcggttcattgccagcccta 12710842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 28242584 - 28242717
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| || |||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||     
T  28242584 caagttcagatcatttatttaacgaatttaattttcagctcaaattcagctcatttggttcatgaaccaaattcaacgagttaattgtcgaatcaagttc 28242683  T
Q  101 cgaactattatcgagttggttcggttcattgcca 134  Q
    |||| |||| |||||||| |||||||||||||||    
T  28242684 cgaattattgtcgagttgattcggttcattgcca 28242717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 54393574 - 54393443
Alignment:
Q  9 gctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactat 108  Q
    ||||| |||||| |||||||||||||||||||||||||| | |||||||||| |||||||||||||||||| | |||||||||||||| || |||||| |    
T  54393574 gctcaattatttgacgaacttaattttcagctcaagttcggctcatttggtttatgaaccaagttcaacgaatcaattgtcgaatcgaattacgaacttt 54393475  T
Q  109 tatcgagttggttcggttcattgccagcccta 140  Q
     |||||||||||||||||||||||||||||||    
T  54393474 aatcgagttggttcggttcattgccagcccta 54393443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 39942939 - 39942806
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||   ||||||| |||||||| |||    
T  39942939 caagttcagctcatctatttaacgaacttaattttcagctcaagttcagctcattaagttcatgaaccaagttcaacagattaattgccgaatcgaattt 39942840  T
Q  101 cgaactattatcgagttggttcggttcattgcca 134  Q
    ||||||||  |||||||||||| |||||||||||    
T  39942839 cgaactatactcgagttggttcagttcattgcca 39942806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 33438866 - 33438731
Alignment:
Q  5 tttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaa 104  Q
    ||||||||| ||| || ||||||||||||||||||||||||||   ||||||||||||||||||||||||||||| | |||||||||||||| || | ||    
T  33438866 tttagctcaattagttgacgaacttaattttcagctcaagttcgactcatttggttcatgaaccaagttcaacgaatcaattgtcgaatcgaattacaaa 33438767  T
Q  105 ctattatcgagttggttcggttcattgccagcccta 140  Q
    || | |||||||||||||||||||||| ||||||||    
T  33438766 ctttaatcgagttggttcggttcattgtcagcccta 33438731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 39135356 - 39135495
Alignment:
Q  2 aagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttc 101  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||   ||||||||| |||| ||      
T  39135356 aagttcagctcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaatgaaccaattgtcgagtcgaattat 39135455  T
Q  102 gaactattatcgagttggttcggttcattgccagccctat 141  Q
    |||||||  |||||||||||||||| ||||||||||||||    
T  39135456 gaactatattcgagttggttcggtttattgccagccctat 39135495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 32689170 - 32689309
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| ||| || || ||||||||||||||||||||||  |||  | |||| |||| | |    
T  32689170 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgt 32689269  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||||| |||||||||||||||||||||| ||||||||    
T  32689270 cgaactataatcgagttggttcggttcattgtcagcccta 32689309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 30662261 - 30662131
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 109  Q
    |||||||||||||||| ||||||||||| |||||||||   ||||||| ||||||||||||||||||||||| |||| ||||||||| | || |||||||    
T  30662261 ctcatttatttaacgagcttaattttcaactcaagttcgactcatttgattcatgaaccaagttcaacgagtcaattatcgaatcgaatctcaaactatt 30662162  T
Q  110 atcgagttggttcggttcattgccagcccta 140  Q
     |||||||||||||| |||||| ||||||||    
T  30662161 ttcgagttggttcggctcattgtcagcccta 30662131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 19560905 - 19560774
Alignment:
Q  9 gctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactat 108  Q
    |||||||||||||||| |||||| | | | ||||||||||| |  ||| |||||||||||||||||||||| ||||||||||| |||| || ||||||||    
T  19560905 gctcatttatttaacggacttaactcttaactcaagttcagcttgtttcgttcatgaaccaagttcaacgaattaattgtcgagtcgaattccgaactat 19560806  T
Q  109 tatcgagttggttcggttcattgccagcccta 140  Q
      ||||||||||||||||||||||||||||||    
T  19560805 attcgagttggttcggttcattgccagcccta 19560774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 39469670 - 39469531
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||| |    |||| ||||||||| ||     
T  39469670 caagtttagctcatttaattaacgaacttaattttcagctcaagttcggctcatttgattcatgaaccaagttcaatggaccaattatcgaatcgaatta 39469571  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    ||||||||  |||||||||||| |||||||  ||||||||    
T  39469570 cgaactatattcgagttggttcagttcattatcagcccta 39469531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 40943562 - 40943701
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||||||||||||||| ||||||||||| |||||||||   |||||||||||||||||||||| ||| ||   |||| || |||||||| |    
T  40943562 caagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaaccaattatcaaatcgagtat 40943661  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    ||||||||| |||||||||||||||| |||||||||||||    
T  40943662 cgaactattttcgagttggttcggtttattgccagcccta 40943701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 26049667 - 26049541
Alignment:
Q  13 atttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatc 112  Q
    ||||||||||||| ||||||||||| |||||||||   ||||||| |||||||||||||||||||  || |||| ||||||||| | || ||||||| ||    
T  26049667 atttatttaacgagcttaattttcaactcaagttcgactcatttgattcatgaaccaagttcaacaggtcaattatcgaatcgaatctcaaactattttc 26049568  T
Q  113 gagttggttcggttcattgccagccct 139  Q
    |||||||||||||||||||||||||||    
T  26049567 gagttggttcggttcattgccagccct 26049541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 41609889 - 41610021
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| ||| || || ||||||||||||||||||||||  |||| | |||| |||| | |    
T  41609889 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 41609988  T
Q  101 cgaactattatcgagttggttcggttcattgcca 134  Q
    |||||||| |||||||||| ||||||||||||||    
T  41609989 cgaactataatcgagttgg-tcggttcattgcca 41610021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 30743593 - 30743713
Alignment:
Q  21 aacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggt 120  Q
    ||||||||||||| ||| ||||| ||||| |||||||||||||||||||||||||||||||| ||  |||| ||||| | ||||||||  ||||||||||    
T  30743593 aacgaacttaattctcaactcaaattcagctcatttggttcatgaaccaagttcaacgagttcatcttcgagtcgagctccgaactatattcgagttggt 30743692  T
Q  121 tcggttcattgccagccctat 141  Q
    |||||||||| ||||||||||    
T  30743693 tcggttcatttccagccctat 30743713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 20550332 - 20550202
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 109  Q
    ||||||||||||||||| |||||||||| |||| ||||   ||||||||||| ||||||||||||||| | | |||| ||||||||||| ||||||||||    
T  20550332 ctcatttatttaacgaatttaattttcaactcatgttcgactcatttggttcgtgaaccaagttcaacaaatcaattatcgaatcgagtatcgaactatt 20550233  T
Q  110 atcgagttggttcggttcattgccagcccta 140  Q
     ||||||||||| ||||||||| ||| ||||    
T  20550232 ttcgagttggtttggttcattgacaggccta 20550202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 1674630 - 1674759
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||| |||||||||||  ||  ||||||||||| |||||||  ||||||||||||||||||||||||||| || ||||||| ||||||| ||     
T  1674630 caagttcagcttatttatttaacatacaaaattttcagcttaagttcaactcatttggttcatgaaccaagttcaacaagataattgttgaatcgaattc 1674729  T
Q  101 cgaactattatcgagttggttcggttcatt 130  Q
     |||||||| ||||||||||||||||||||    
T  1674730 tgaactattgtcgagttggttcggttcatt 1674759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 44574535 - 44574666
Alignment:
Q  9 gctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactat 108  Q
    ||||||||| | ||||||||| ||||| | ||||||||||| ||||| |||||| |||| ||||||||||| ||||||| ||| ||||| ||||||||||    
T  44574535 gctcatttaataaacgaacttgatttttaactcaagttcagctcattaggttcacgaactaagttcaacgaattaattgccgagtcgagcttcgaactat 44574634  T
Q  109 tatcgagttggttcggttcattgccagcccta 140  Q
      ||||||||  ||||||||||||||||||||    
T  44574635 attcgagttgtctcggttcattgccagcccta 44574666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 138
Target Start/End: Complemental strand, 23206445 - 23206310
Alignment:
Q  2 aagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttc 101  Q
    ||||| |||||||||| |||| |||||||||||||||||||||| ||| || || ||||||||||| |||||||||   |||| | || | |||| | ||    
T  23206445 aagttcagctcatttaattaa-gaacttaattttcagctcaagtccagctcgttaggttcatgaacaaagttcaacagattaaatatcaagtcgaatgtc 23206347  T
Q  102 gaactattatcgagttggttcggttcattgccagccc 138  Q
    ||||||| |||||||||||||||||||||||||||||    
T  23206346 gaactataatcgagttggttcggttcattgccagccc 23206310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 46293343 - 46293213
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 109  Q
    |||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||      ||||||| | |||| ||| |||||||     
T  46293343 ctcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaaattcaattgaccaattgtcaagtcgaattttgaactata 46293244  T
Q  110 atcgagttggttcggttcattgccagcccta 140  Q
     |||||||| |||||||||||| ||||||||    
T  46293243 ttcgagttgattcggttcattgtcagcccta 46293213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 18074584 - 18074707
Alignment:
Q  8 agctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaacta 107  Q
    |||||||||| |||||||||||||||||||| |||| ||||  |||||| ||||||||| ||| |||||||| |||||| || |||||||| |||||||     
T  18074584 agctcatttagttaacgaacttaattttcagttcaaattcaactcatttagttcatgaaacaaattcaacgaattaattatcaaatcgagtctcgaactc 18074683  T
Q  108 ttatcgagttggttcggttcattg 131  Q
    |  ||||||||| || ||||||||    
T  18074684 tattcgagttggctcagttcattg 18074707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 132
Target Start/End: Original strand, 28687074 - 28687204
Alignment:
Q  2 aagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttc 101  Q
    ||||| ||||| |||||||||||||||||||||||||||||| || ||  | | |||||||||||||||||||||| ||  |||| | || ||||||| |    
T  28687074 aagttgagctcgtttatttaacgaacttaattttcagctcaaatttagcccgtctggttcatgaaccaagttcaacaagcaaattattgagtcgagttcc 28687173  T
Q  102 gaactattatcgagttggttcggttcattgc 132  Q
    |||| ||  |||| |||||||| ||||||||    
T  28687174 gaaccatattcgatttggttcgcttcattgc 28687204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 45714730 - 45714842
Alignment:
Q  34 ttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggttcattgcc 133  Q
    ||||||||||||||   ||||||| || ||||| |||||||||||| | |||||||||||||| |  |||||| | ||||||||||||| ||||||||||    
T  45714730 ttcagctcaagttcgactcatttgatttatgaatcaagttcaacgaatcaattgtcgaatcgaataacgaactttaatcgagttggttcagttcattgcc 45714829  T
Q  134 agccctatccgcc 146  Q
    ||| ||| |||||    
T  45714830 agctctagccgcc 45714842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 50965404 - 50965483
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaa-ttttcagctcaagttcagttcatttggttcatgaaccaagttcaacga 79  Q
    |||||| |||||||||||||||||||||||| |||||||||||| ||||| ||||| |||||||||||||| || |||||    
T  50965404 caagttcagctcatttatttaacgaacttaatttttcagctcaaattcagctcattaggttcatgaaccaaatttaacga 50965483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 51068539 - 51068618
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaa-ttttcagctcaagttcagttcatttggttcatgaaccaagttcaacga 79  Q
    |||||| |||||||||||||||||||||||| |||||||||||| ||||| ||||| |||||||||||||| || |||||    
T  51068539 caagttcagctcatttatttaacgaacttaatttttcagctcaaattcagctcattaggttcatgaaccaaatttaacga 51068618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 141
Target Start/End: Complemental strand, 54432255 - 54432176
Alignment:
Q  62 atgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggttcattgccagccctat 141  Q
    ||||||||||| ||| ||   |||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  54432255 atgaaccaagtccaatgaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgccagccctat 54432176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 9 - 119
Target Start/End: Complemental strand, 15822480 - 15822370
Alignment:
Q  9 gctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactat 108  Q
    |||||||||||| |||| ||||||||||| |||||||||   ||| |||| ||||||||||||||||||||   ||||  |||||||| |||||||||||    
T  15822480 gctcatttatttgacgagcttaattttcaactcaagttctactcaattggatcatgaaccaagttcaacgaaacaattaccgaatcgaatttcgaactat 15822381  T
Q  109 tatcgagttgg 119  Q
    | |||| ||||    
T  15822380 tttcgaattgg 15822370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 10 - 136
Target Start/End: Original strand, 26136343 - 26136469
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 109  Q
    ||||||| |||||| ||| ||||||| | ||||||||| | ||| || |||||| ||||||||||||| |  |||||  |||||||||| || |||||||    
T  26136343 ctcatttgtttaacaaacataattttgaactcaagttcggctcacttagttcataaaccaagttcaacaaactaattaacgaatcgagtctcaaactatt 26136442  T
Q  110 atcgagttggttcggttcattgccagc 136  Q
    ||| |||||||| ||||||||| ||||    
T  26136443 atcaagttggttgggttcattgtcagc 26136469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 38643647 - 38643546
Alignment:
Q  39 ctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggttcattgccagccc 138  Q
    ||||||||||| || ||||||||||||||||| |||||| | |||||||||||||  |||  | ||||||| ||||||| |||||||| ||||||| |||    
T  38643647 ctcaagttcagctcttttggttcatgaaccaaattcaacaaattaattgtcgaattaagtcccaaactattgtcgagttagttcggtttattgccaaccc 38643548  T
Q  139 ta 140  Q
    ||    
T  38643547 ta 38643546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 52199390 - 52199446
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttg 57  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  52199390 caagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctcatttg 52199446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 33692038 - 33691953
Alignment:
Q  18 tttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcga 103  Q
    ||||||||||||| | || |||||||||||| ||||||| ||| ||||||||| |||||| | | |||||||||||||||| ||||    
T  33692038 tttaacgaacttactcttaagctcaagttcatttcatttagtttatgaaccaaattcaacaaatcaattgtcgaatcgagtctcga 33691953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 55203182 - 55203066
Alignment:
Q  25 aacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaa--ctattatcgagttggttc 122  Q
    ||||||||||| | || |||||||| ||||||| |||| ||| ||| |||||||| |||||||||||||||||||  |||   |||| |||| || ||||    
T  55203182 aacttaatttttaacttaagttcagctcatttgtttcaagaatcaaattcaacgaattaattgtcgaatcgagttctgaattatattgtcgaattagttc 55203083  T
Q  123 ggttcattgccagccct 139  Q
    ||||||||| |||||||    
T  55203082 ggttcattgtcagccct 55203066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 55452799 - 55452670
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 109  Q
    |||||||| ||||||||||||| ||| |||| || ||||  || ||||||||||||||||||||||||  || ||||||||| | || | || |||| |     
T  55452799 ctcatttagttaacgaacttaagttttagcttaa-ttcaactcgtttggttcatgaaccaagttcaactcgtcaattgtcgagttgaatctcaaacttta 55452701  T
Q  110 atcgagttggttcggttcattgccagcccta 140  Q
    || ||||||| || ||||||||||| |||||    
T  55452700 attgagttggctcagttcattgccaacccta 55452670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 5418679 - 5418755
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaac 77  Q
    |||||| | |||||||| |||||||||||||| || |||||||||||   || |||||||||||||| |||||||||    
T  5418679 caagttcaactcatttagttaacgaacttaatctttagctcaagttcgactcgtttggttcatgaactaagttcaac 5418755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 18652579 - 18652512
Alignment:
Q  12 catttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacga 79  Q
    ||||||||||||||| |||||||| |||||||  |||  ||||||||||||| |||||||||| ||||    
T  18652579 catttatttaacgaatttaatttttagctcaaactcaactcatttggttcattaaccaagttcgacga 18652512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 48730924 - 48730856
Alignment:
Q  53 atttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggtt 121  Q
    |||||||||||||| |||||| ||||| ||||||  | |||||| | |||||||||| |||||||||||    
T  48730924 atttggttcatgaatcaagtttaacgaattaattagcaaatcgaatctcgaactattttcgagttggtt 48730856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 125
Target Start/End: Original strand, 31589636 - 31589747
Alignment:
Q  14 tttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcg 113  Q
    |||||||||| ||||||||||||| ||||||||    | |||||||| ||||||||||| ||| || || |||  |||||| | ||| ||| |||| | |    
T  31589636 tttatttaacaaacttaattttcaactcaagtttgacttatttggtttatgaaccaagtccaatgaattgattaccgaatcaaattttgaattattttgg 31589735  T
Q  114 agttggttcggt 125  Q
    ||||||||||||    
T  31589736 agttggttcggt 31589747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 53529729 - 53529682
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttca 48  Q
    |||||| |||||| ||| || |||||||||||||||||||||||||||    
T  53529729 caagttcagctcaattagttgacgaacttaattttcagctcaagttca 53529682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 1072830 - 1072748
Alignment:
Q  19 ttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttc 101  Q
    ||||| |||||||||||| ||||||  |||  |||||||||||||||||  ||| |||||| | |||| |||| |||||||||    
T  1072830 ttaacaaacttaattttcggctcaaactcaactcatttggttcatgaacttagtccaacgaatcaattatcgagtcgagtttc 1072748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 28700998 - 28701096
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtt 99  Q
    |||||| | ||||||| ||||||||| ||||||||||| |||| ||||  | ||||||||||||||  || || ||| ||  |||||| ||||||||||    
T  28700998 caagttcaactcatttttttaacgaatttaattttcagttcaacttcaacttatttggttcatgaattaaatttaacaagcaaattgttgaatcgagtt 28701096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 36917952 - 36917862
Alignment:
Q  11 tcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttc 101  Q
    ||||||| || |||||||||||||| | || || | ||  || || |||| |||||||| ||||||||| ||||||||||| |||||||||    
T  36917952 tcatttaattcacgaacttaatttttaacttaattacaactcgttgggtttatgaaccacgttcaacgacttaattgtcgagtcgagtttc 36917862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 25582685 - 25582616
Alignment:
Q  19 ttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgt 88  Q
    ||||||||||||||||||| ||||| |||| |||||||| || ||||| ||| || ||||| | ||||||    
T  25582685 ttaacgaacttaattttcaactcaaattcaattcatttgatttatgaatcaaatttaacgaatcaattgt 25582616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 1e-59; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 33124708 - 33124840
Alignment:
Q  8 agctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaacta 107  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  33124708 agctcatttatttaacgaacttaattttcagctcaagttcaattcatttggttcataaaccaagttcaacgagttaattgtcgaatcgagtttcaaacta 33124807  T
Q  108 ttatcgagttggttcggttcattgccagcccta 140  Q
    || ||||||||||||||||||||||||||||||    
T  33124808 ttgtcgagttggttcggttcattgccagcccta 33124840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 22075069 - 22075209
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||     
T  22075069 caagttcagctcatttatttaacgaacttaattttcagctcaagttcagctcatttggttcgtgaaccacgttcaacgagttaattgtcgaatcgagttc 22075168  T
Q  101 cgaactattatcgagttggttcggttcattgccagccctat 141  Q
      |||||||||||||||||||||||||||||||||||||||    
T  22075169 taaactattatcgagttggttcggttcattgccagccctat 22075209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 10618927 - 10619060
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||     
T  10618927 caagttcagctcatttatttaacgaacttaattttcagctcaagttcagctcatttagttcatgaaccaagttcaacgagttaattgtcgaatcgagttc 10619026  T
Q  101 cgaactattatcgagttggttcggttcattgcca 134  Q
    | ||||||| |||||||| |||||||||| ||||    
T  10619027 caaactattgtcgagttgattcggttcatagcca 10619060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 23227130 - 23226999
Alignment:
Q  9 gctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactat 108  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||| || |||||||||||||||||||||||||||    
T  23227130 gctcatttatttaacgaacttaattttcagctcaagttcagctcatttgattcatgtaccaagttcaacaagataattgtcgaatcgagtttcgaactat 23227031  T
Q  109 tatcgagttggttcggttcattgccagcccta 140  Q
    | |||||||||||||| ||||| |||||||||    
T  23227030 tgtcgagttggttcggatcattaccagcccta 23226999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 23236283 - 23236152
Alignment:
Q  9 gctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactat 108  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||| || |||||||||||||||||||||||||||    
T  23236283 gctcatttatttaacgaacttaattttcagctcaagttcagctcatttgattcatgtaccaagttcaacaagataattgtcgaatcgagtttcgaactat 23236184  T
Q  109 tatcgagttggttcggttcattgccagcccta 140  Q
    | |||||||||||||| ||||| |||||||||    
T  23236183 tgtcgagttggttcggatcattaccagcccta 23236152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 44422041 - 44421901
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaa-ttttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtt 99  Q
    |||||| ||||||||| |||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||     
T  44422041 caagttcagctcatttgtttaacgaacttaaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtc 44421942  T
Q  100 tcgaactattatcgagttggttcggttcattgccagcccta 140  Q
     | ||||||| ||||||||||||||||||||| ||||||||    
T  44421941 ccaaactattgtcgagttggttcggttcattgacagcccta 44421901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 33935514 - 33935653
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | ||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||      
T  33935514 caagttcatctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgagttaattatcgaatcgagtcc 33935613  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    | ||||||| ||||||||||||| ||||||||||||||||    
T  33935614 caaactattgtcgagttggttcgattcattgccagcccta 33935653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 222365 - 222226
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| ||||||||| ||||||||| ||||||||||| |||||||||| || ||||||||||||||||| ||||||||||||||||||||||| |||      
T  222365 caagttcagctcatttgtttaacgaatttaattttcagttcaagttcagctcgtttggttcatgaaccaaattcaacgagttaattgtcgaatcaagtcc 222266  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    | ||||||| ||||||||||||||||||||||||||||||    
T  222265 caaactattgtcgagttggttcggttcattgccagcccta 222226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 33171665 - 33171534
Alignment:
Q  9 gctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactat 108  Q
    |||||||||||||| |||||||||||| ||||||||||||| ||||||||||||| || |||||||||| || ||||||||  |||||||||||||||||    
T  33171665 gctcatttatttaatgaacttaatttttagctcaagttcagctcatttggttcataaatcaagttcaacaagataattgtcttatcgagtttcgaactat 33171566  T
Q  109 tatcgagttggttcggttcattgccagcccta 140  Q
    |||||||||||||||| |||||||||||||||    
T  33171565 tatcgagttggttcggatcattgccagcccta 33171534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 18250132 - 18249994
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||||||||||||||| | ||||||||| |||||||||   ||||||||||||||||||||||||||||| | |||| ||||||||||| |    
T  18250132 caagttcaactcatttatttaacgagcataattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgaatcaattatcgaatcgagtct 18250033  T
Q  101 cgaactattatcgagttggttcggttcattgccagccct 139  Q
     |||||||| |||||||||||||||||||||||||||||    
T  18250032 tgaactattttcgagttggttcggttcattgccagccct 18249994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 7447882 - 7448030
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||   ||||||||| |||| ||     
T  7447882 caagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaatgaaccaattgtcgagtcgaatta 7447981  T
Q  101 cgaactattatcgagttggttcggttcattgccagccctatccgccacc 149  Q
     |||||||  ||||||||||||||||||||| |||||||||||| ||||    
T  7447982 tgaactatattcgagttggttcggttcattgtcagccctatccgacacc 7448030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 37334284 - 37334424
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| ||| || || ||||||||||||||||||||||  |||| | ||||||||| | |    
T  37334284 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgaatcgaatgt 37334383  T
Q  101 cgaactattatcgagttggttcggttcattgccagccctat 141  Q
    |||||||| |||||||||||||||||||||| || ||||||    
T  37334384 cgaactataatcgagttggttcggttcattgtcaaccctat 37334424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 5776269 - 5776130
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| ||| || || ||||||||||||||||||||||  |||| | |||| |||| | |    
T  5776269 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 5776170  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||||| ||||||||||||||||||||||||| |||||    
T  5776169 cgaactataatcgagttggttcggttcattgccaacccta 5776130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 46573742 - 46573612
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 109  Q
    |||||||||||||||| ||||||||||| || ||||||   ||||||||||||||||||||||||||||||| |||| ||||||||| | ||||| ||||    
T  46573742 ctcatttatttaacgagcttaattttcaacttaagttcgactcatttggttcatgaaccaagttcaacgagtcaattatcgaatcgaatctcgaattatt 46573643  T
Q  110 atcgagttggttcggttcattgccagcccta 140  Q
     | ||||||||||||||||||||||||||||    
T  46573642 tttgagttggttcggttcattgccagcccta 46573612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 48634462 - 48634583
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 109  Q
    |||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||   |||||||||||  ||||||||    
T  48634462 ctcatttatttaacgaacttaatttttagctcaagttcaactcatttggttcatgaaccaagttcaacgagttaatctacgaatcgagttctgaactatt 48634561  T
Q  110 atcgagttggttcggttcattg 131  Q
     |||||||| || |||||||||    
T  48634562 gtcgagttgatttggttcattg 48634583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 3942182 - 3942321
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||| ||| || ||||||||||||||||||||||||   |||||||||||||||||||||||||||| || | || ||||||||||| ||     
T  3942182 caagttcagctcaattaattcacgaacttaattttcagctcaagtctggttcatttggttcatgaaccaagttcaatgaatcaactgtcgaatcgaatta 3942281  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||| | |||||||||||||||||||||| ||||||||    
T  3942282 cgaactttaatcgagttggttcggttcattgtcagcccta 3942321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 5795075 - 5794936
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| ||| || || ||||||||||||||||||||||  |||  | |||| |||| | |    
T  5795075 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgt 5794976  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||||| |||| ||||||||||||||||||||||||||    
T  5794975 cgaactataatcgggttggttcggttcattgccagcccta 5794936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 43052878 - 43053017
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| ||||||| || |||||||||||||||||| |||||||| ||| ||||| ||||||||||||||||||||||  |||| | |||| |||| | |    
T  43052878 caagttcagctcatctaattaacgaacttaattttcggctcaagtccagctcattaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 43052977  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||||| ||||||||||||||||||||||||| |||||    
T  43052978 cgaactataatcgagttggttcggttcattgccaacccta 43053017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 17025491 - 17025361
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 109  Q
    |||||||||||||||| ||||||||||| |||||||||   ||||||||||| ||||||||||||||||||| |||| |||||||||   | ||||||||    
T  17025491 ctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgagtcaattatcgaatcgaaccttgaactatt 17025392  T
Q  110 atcgagttggttcggttcattgccagcccta 140  Q
     ||||||||||||||||||||| ||||||||    
T  17025391 ttcgagttggttcggttcattgtcagcccta 17025361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 18740348 - 18740218
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 109  Q
    |||||||||||||||| ||||||||||| |||||||||   ||||||||||||||||||||||| || |||| |||| || |||||| | ||||||||||    
T  18740348 ctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtttaatgagtcaattatcaaatcgaatctcgaactatt 18740249  T
Q  110 atcgagttggttcggttcattgccagcccta 140  Q
     ||||||||||||||||||||||| ||||||    
T  18740248 ttcgagttggttcggttcattgccggcccta 18740218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 33899074 - 33898944
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 109  Q
    |||||||||||||||| ||||||||||| |||||||||   |||||||||||||||||||||| ||| ||  ||||| ||||||||| | ||||||||||    
T  33899074 ctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaactaattctcgaatcgaatatcgaactatt 33898975  T
Q  110 atcgagttggttcggttcattgccagcccta 140  Q
     ||||||||||||||||||||| ||||||||    
T  33898974 ttcgagttggttcggttcattgtcagcccta 33898944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 140
Target Start/End: Complemental strand, 665979 - 665847
Alignment:
Q  8 agctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaacta 107  Q
    |||||||||| ||||||||||||||||||||||||||| ||| || || |||||||||||||| || ||||  |||| | |||| |||| | ||||||||    
T  665979 agctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaaatttaacggattaaatatcgagtcgaatgtcgaacta 665880  T
Q  108 ttatcgagttggttcggttcattgccagcccta 140  Q
    | |||||||||||||||||||||||||||||||    
T  665879 taatcgagttggttcggttcattgccagcccta 665847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 141
Target Start/End: Original strand, 36472457 - 36472585
Alignment:
Q  13 atttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatc 112  Q
    ||||||||||||| ||||||||||| ||||||||| | ||||||||||||||||||||||||||||| | | || ||||||||||| || |  |||| ||    
T  36472457 atttatttaacgagcttaattttcaactcaagttcggctcatttggttcatgaaccaagttcaacgaatcatttatcgaatcgagtatcaagttattttc 36472556  T
Q  113 gagttggttcggttcattgccagccctat 141  Q
    ||||||||||||||||||| |||||||||    
T  36472557 gagttggttcggttcattgtcagccctat 36472585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 21760722 - 21760583
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | ||||||||||||||||  ||| |||||| |||||||||   ||||||||||| ||||| ||||||||||| | |||| |||||||||||||    
T  21760722 caagttcaactcatttatttaacgagtttagttttcaactcaagttcgactcatttggttcgtgaacaaagttcaacgaatcaattatcgaatcgagttt 21760623  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    ||||||||| ||||||||||||||||||||  ||||||||    
T  21760622 cgaactattttcgagttggttcggttcattatcagcccta 21760583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 26719821 - 26719960
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||||||||||||||||||||||||||| |||||||||   |||||||||||||||||||||| ||| ||   |||| ||||||||||| |    
T  26719821 caagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcgagtat 26719920  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    ||||||||| ||||||||||||| ||||||| ||| ||||    
T  26719921 cgaactattttcgagttggttcgattcattgtcagtccta 26719960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 41449790 - 41449884
Alignment:
Q  45 ttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggttcattgccagccct 139  Q
    ||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||    
T  41449790 ttcagctcatttggatcatgaaccaagttcaacgagataattgtcgaatcgagtttcgaactattgtcgagttggttcggatcattgtcagccct 41449884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 45176251 - 45176381
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||||||| |||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||  |||||| |||| |||| | |    
T  45176251 caagttcaactcatttaattaacgaacttaattttcagctaaagttcagctcgtttggttcatgaaccaagttcaacggattaattatcgagtcgaatgt 45176350  T
Q  101 cgaactattatcgagttggttcggttcattg 131  Q
    | |||||| |||||||| |||||||||||||    
T  45176351 caaactataatcgagtttgttcggttcattg 45176381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 49034354 - 49034224
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 109  Q
    ||||||||||| |||| ||||||||||| |||||||||   |||||||||||||||||||||||||||||   ||||  |||||||| ||||||||||||    
T  49034354 ctcatttatttgacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgaaacaattaccgaatcgaatttcgaactatt 49034255  T
Q  110 atcgagttggttcggttcattgccagcccta 140  Q
     ||||||||| ||||||| ||||||||||||    
T  49034254 ttcgagttggatcggttcgttgccagcccta 49034224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 3930855 - 3930720
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| ||| || || |||||||| |||||||||||||  |||  | |||| |||| | |    
T  3930855 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatggaccaagttcaacggattagatatcgagtcgaatgt 3930756  T
Q  101 cgaactattatcgagttggttcggttcattgccagc 136  Q
    |||||||| ||||||||| |||||||||||||||||    
T  3930755 cgaactataatcgagttgtttcggttcattgccagc 3930720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 28949897 - 28949758
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| ||||||||||||||||| ||||||| | ||| || || ||||||||||||||||||||||  |||  | |||| |||| | |    
T  28949897 caagttcagctcatttaattaacgaacttaatttttagctcaattccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgt 28949798  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||||| ||||||||| |||||||||||||||||||||    
T  28949797 cgaactataatcgagttgattcggttcattgccagcccta 28949758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 36927005 - 36927143
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||||||| ||||||||||||||||| ||||||||| ||  || || ||||||||||||||||||||||  |||  | |||| |||| | |    
T  36927005 caagttcaactcatttaattaacgaacttaatttttagctcaagtccaactcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgt 36927104  T
Q  101 cgaactattatcgagttggttcggttcattgccagccct 139  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  36927105 cgaactataatcgagttggttcggttcattgccagccct 36927143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 2 - 140
Target Start/End: Complemental strand, 2466655 - 2466516
Alignment:
Q  2 aagtttagctcatttatttaacgaacttaattttcagctcaag-ttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||| || || |||||  |||| ||||||||||||||| |||||| |||||||   ||||     
T  2466655 aagtttagctcatttatttaacgaactaaattttcagctcaagttttagctcattaagttcgtgaaccaagttcaacaagttaaatgtcgaactaagttc 2466556  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    | |||||||||||||||| |||| ||||||  ||||||||    
T  2466555 caaactattatcgagttgattcgattcattttcagcccta 2466516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 42072089 - 42072228
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| ||| || || |||||||||| |||||||||||  |||  | ||||||||| | |    
T  42072089 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaatcaagttcaacggattagatatcgaatcgaatgt 42072188  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    | |||||| ||||||||| |||||| ||||| ||||||||    
T  42072189 caaactataatcgagttgtttcggtacattgtcagcccta 42072228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 140
Target Start/End: Original strand, 32356980 - 32357106
Alignment:
Q  14 tttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcg 113  Q
    |||| ||||||||||| ||||||| ||||| ||| | |||||| ||||||||| |||||||||||| |||||| ||||||||||| |||||||||| |      
T  32356980 tttacttaacgaactttattttcaactcaaattcggctcatttagttcatgaatcaagttcaacgaattaattatcgaatcgagtctcgaactattttta 32357079  T
Q  114 agttggttcggttcattgccagcccta 140  Q
    |||||||| ||||||||| ||||||||    
T  32357080 agttggtttggttcattgtcagcccta 32357106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 48505927 - 48505794
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||  |||  |     || |||  |    
T  48505927 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcattaggttcatgaaccaagttcaacggattagat-----attgag--t 48505835  T
Q  101 cgaactattatcgagttggttcggttcattgccagccctat 141  Q
    |||||||| |||||||||||||||||||||| |||||||||    
T  48505834 cgaactataatcgagttggttcggttcattgtcagccctat 48505794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 20401002 - 20401141
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| |||| ||||||||| || ||||||||||||||||| | |||||||||||||| ||||| |   |||||  ||| |||| |||    
T  20401002 caagttcagctcatttaattaaagaacttaatatttagctcaagttcagttcagtaggttcatgaaccaaattcaatggactaattaccgagtcgaattt 20401101  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    ||||||||  ||||||||||||||||||||| || |||||    
T  20401102 cgaactatattcgagttggttcggttcattgtcaacccta 20401141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 11595926 - 11595796
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 109  Q
    |||||||| |||||||||||||| || ||||||||||| | || ||||||||||||||||||||||||||  |||||  ||| ||||||| |||||| |     
T  11595926 ctcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagtcgagttccgaacttta 11595827  T
Q  110 atcgagttggttcggttcattgccagcccta 140  Q
     ||||||||  ||||||||||| ||||||||    
T  11595826 ttcgagttgtatcggttcattgtcagcccta 11595796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 140
Target Start/End: Complemental strand, 35543669 - 35543556
Alignment:
Q  27 cttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggtt 126  Q
    ||||||||||| |||||||||   |||||| |||||||||||||||||||||| | |||| |||||| |||| || ||||||| ||||||||||||| ||    
T  35543669 cttaattttcaactcaagttcgactcatttagttcatgaaccaagttcaacgaatcaattatcgaatggagtctcaaactattttcgagttggttcgatt 35543570  T
Q  127 cattgccagcccta 140  Q
    ||||| ||||||||    
T  35543569 cattgtcagcccta 35543556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 141
Target Start/End: Complemental strand, 37401698 - 37401565
Alignment:
Q  8 agctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaacta 107  Q
    |||||| ||| || |||||||||||||||| ||||||||  | |||||||||||||||| |||||||||| | | |||| ||||||||| || ||||||     
T  37401698 agctcaattagttgacgaacttaattttcaactcaagtttggctcatttggttcatgaatcaagttcaacaaatcaattttcgaatcgaattacgaactc 37401599  T
Q  108 ttatcgagttggttcggttcattgccagccctat 141  Q
    | ||||| |||||| ||||||||| |||||||||    
T  37401598 taatcgaattggtttggttcattgtcagccctat 37401565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 45055734 - 45055867
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||||||| |||||||||||||| || ||||||||||| | || ||||||||||||||||||||||||||  |||||  ||| |||||||     
T  45055734 caagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagtcgagttc 45055833  T
Q  101 cgaactattatcgagttggttcggttcattgcca 134  Q
    |||||| |  ||||||||  ||||||||||||||    
T  45055834 cgaactttattcgagttgtatcggttcattgcca 45055867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 10096478 - 10096617
Alignment:
Q  2 aagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttc 101  Q
    ||||| |||||||||| ||| ||||||||||||   | |||||||||  |||||||||||||||||||||||| | ||   ||||||||| |||||||||    
T  10096478 aagttcagctcatttagttagcgaacttaatttctcgttcaagttcaactcatttggttcatgaaccaagttcgatgaacaaattgtcgagtcgagtttc 10096577  T
Q  102 gaactattatcgagttggttcggttcattgccagccctat 141  Q
    |||||||  |||| |||  || ||||||||||||||||||    
T  10096578 gaactatgttcgaattgcctcagttcattgccagccctat 10096617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 137
Target Start/End: Original strand, 33019321 - 33019443
Alignment:
Q  15 ttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcga 114  Q
    |||||||||||  |||||||||| |||||||||   | ||||| ||| |||||||||||||||||   |||| ||||||||||| |||||||||| | ||    
T  33019321 ttatttaacgagtttaattttcaactcaagttcgacttatttgattcgtgaaccaagttcaacgaaccaattatcgaatcgagtatcgaactatttttga 33019420  T
Q  115 gttggttcggttcattgccagcc 137  Q
    ||||||||||||||||| |||||    
T  33019421 gttggttcggttcattgtcagcc 33019443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 37106853 - 37106971
Alignment:
Q  22 acgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggtt 121  Q
    |||||||||||||| ||||||||||| | ||||||||| ||| ||| |||||| |||| |||||| ||||||||| || |||||| | || |||| ||||    
T  37106853 acgaacttaatttttagctcaagttcggctcatttggtacattaactaagttcgacgaattaattatcgaatcgaattacgaactctaattgagtcggtt 37106952  T
Q  122 cggttcattgccagcccta 140  Q
    ||||||||||||| |||||    
T  37106953 cggttcattgccaacccta 37106971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 17608718 - 17608854
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||| ||| || ||||||||||||||||| |||||||| | ||||||||||||| |||||||||| |||| | ||||   ||||||| ||     
T  17608718 caagttcaactcaattagttgacgaacttaattttcagatcaagttcggctcatttggttcatcaaccaagttcgacgaatcaatt---gaatcgaatta 17608814  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||| ||||||||||| |||||||||||| | ||||||    
T  17608815 cgaacttttatcgagttgattcggttcattgtcggcccta 17608854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 37 - 130
Target Start/End: Complemental strand, 33140905 - 33140812
Alignment:
Q  37 agctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggttcatt 130  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||| || ||||||||  ||||||||  ||||||||||    
T  33140905 agctcaagttcagttcatttcattcatgaaccaagttcaacgagttaattgtcaagtcgaattccgaactatgttcgagttgactcggttcatt 33140812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 26216278 - 26216410
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| ||||| |||| ||||||||||||||||||||||||||| ||| || || ||||||| ||||||||||||||  |||| | ||       ||      
T  26216278 caagttcagctcctttaattaacgaacttaattttcagctcaagtccagctcgttaggttcataaaccaagttcaacggattaaatatc-------gtga 26216370  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||||| ||| |||||||||||||||||||||||||||    
T  26216371 cgaactataatcaagttggttcggttcattgccagcccta 26216410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 126
Target Start/End: Complemental strand, 29037910 - 29037794
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 109  Q
    ||||||| ||||||| |||||||||||| |||||||||   ||||||||||||||||| ||||||| | | ||||||  |||||||||| || |||||||    
T  29037910 ctcatttgtttaacggacttaattttcaactcaagttcgtctcatttggttcatgaacaaagttcagcaaattaattaccgaatcgagtctcaaactatt 29037811  T
Q  110 atcgagttggttcggtt 126  Q
     ||||| |||| |||||    
T  29037810 ttcgagctggtacggtt 29037794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 40480190 - 40480050
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcattt-ggttcatgaaccaagttcaacgagttaattgtcgaatcgagtt 99  Q
    |||||| | |||||||| |||||||||||||| || ||||||||||| | || ||| |||||||||||||||||||||||  |||||  ||| |||||||    
T  40480190 caagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgttttggttcatgaaccaagttcaacgaactaattaccgactcgagtt 40480091  T
Q  100 tcgaactattatcgagttggttcggttcattgccagcccta 140  Q
     |||||| |  ||||||||  || ||||||| |||||||||    
T  40480090 ccgaactttattcgagttgtatcagttcattaccagcccta 40480050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 134
Target Start/End: Complemental strand, 24128589 - 24128506
Alignment:
Q  51 tcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggttcattgcca 134  Q
    |||||||||||||||||||| ||||||||||||||| ||||||| |||| |||| |||  ||||||  ||||||||||||||||    
T  24128589 tcatttggttcatgaaccaaattcaacgagttaattatcgaatcaagttccgaaatatgttcgagtgtgttcggttcattgcca 24128506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 136
Target Start/End: Original strand, 31491833 - 31491956
Alignment:
Q  13 atttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatc 112  Q
    |||||||||||||||||||| || || | ||||||   ||||||||||||||   |||||||||||| |||||| ||||||||| | || ||||||| |     
T  31491833 atttatttaacgaacttaatattgagtttaagttcgactcatttggttcatgtgtcaagttcaacgaattaattatcgaatcgaatctcaaactattttt 31491932  T
Q  113 gagttggttcggttcattgccagc 136  Q
    |||||| |||||||||||| ||||    
T  31491933 gagttgattcggttcattgtcagc 31491956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 27231657 - 27231539
Alignment:
Q  22 acgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggtt 121  Q
    ||||||||||||||||| |||||||| | ||||||| | |||||| ||||||| |||| | |||| ||||||||| || |||||| | ||  || |||||    
T  27231657 acgaacttaattttcagttcaagttcggctcatttgatacatgaatcaagttcgacgaatcaattatcgaatcgaattacgaactctaattaagctggtt 27231558  T
Q  122 cggttcattgccagcccta 140  Q
    |||||||||| ||||||||    
T  27231557 cggttcattgtcagcccta 27231539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 29527392 - 29527483
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagtt----cagttcatttggttcatgaaccaagttcaacgagttaattgt 88  Q
    ||||||||||||||||| |||||||||||||||| ||||| |||||    ||  |||||||||| ||||| |||||||||||||||||||||    
T  29527392 caagtttagctcatttaattaacgaacttaatttacagctgaagttcaaccaactcatttggttaatgaatcaagttcaacgagttaattgt 29527483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 37 - 134
Target Start/End: Original strand, 388988 - 389085
Alignment:
Q  37 agctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggttcattgcca 134  Q
    ||||||||||||| || || ||||||||||||||||||||||  |||| | |||| | || | ||||||||| ||||||||| |||||||||||||||    
T  388988 agctcaagttcagctcgttaggttcatgaaccaagttcaacggattaaatatcgagttgaatgtcgaactataatcgagttgattcggttcattgcca 389085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 40 - 135
Target Start/End: Original strand, 32245443 - 32245538
Alignment:
Q  40 tcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggttcattgccag 135  Q
    |||||||||||||||||| ||||||||||||||||||||| | ||||||| |||| |  | |||||| | ||  ||||||||| ||||||||||||    
T  32245443 tcaagttcagttcatttgattcatgaaccaagttcaacgaatcaattgtccaatcaaactacgaactttaatatagttggttcagttcattgccag 32245538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 15434249 - 15434315
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaac 67  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| ||| || || |||||||||||    
T  15434249 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaac 15434315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 46652766 - 46652633
Alignment:
Q  7 tagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaact 106  Q
    ||||||||||| ||||| ||||||||| | || | ||||||||   ||| |||||||||||||||| ||||   |||||| ||||||||| |||||||||    
T  46652766 tagctcatttaattaacaaacttaattcttagtttaagttcagcatattaggttcatgaaccaagtccaacagattaattatcgaatcgaatttcgaact 46652667  T
Q  107 attatcgagttggttcggttcattgccagcccta 140  Q
    ||  |||| ||||| ||||| ||| | |||||||    
T  46652666 atattcgaattggtccggtttattactagcccta 46652633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 37250040 - 37250107
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaacc 68  Q
    ||||||||||||| ||  |||||||| |||||||||||||||||| | | ||||||||||||| ||||    
T  37250040 caagtttagctcacttggttaacgaaattaattttcagctcaagtgcggctcatttggttcattaacc 37250107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 140
Target Start/End: Original strand, 15434312 - 15434350
Alignment:
Q  102 gaactattatcgagttggttcggttcattgccagcccta 140  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  15434312 gaactataatcgagttggttcggttcattgccagcccta 15434350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 23237656 - 23237578
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacga 79  Q
    |||||| | |||||||| ||||||||||||||| | | ||||||||| | | ||| |||||||||||||||| ||||||    
T  23237656 caagttcaactcatttaattaacgaacttaattcttaactcaagttcggctaattaggttcatgaaccaagtccaacga 23237578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 49001113 - 49001035
Alignment:
Q  13 atttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcga 91  Q
    ||||| |||||||||||||||||||| ||||||||| || |||| |||||| ||| |||||  | ||||||||| ||||    
T  49001113 atttagttaacgaacttaattttcagttcaagttcaatttattttgttcataaactaagtttgatgagttaattatcga 49001035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 30919428 - 30919519
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaa 92  Q
    |||||| | ||||||||| ||||||  ||| |||||| |||||||||   ||||||||||| | ||||||||||||||| | |||| |||||    
T  30919428 caagttcaactcatttatctaacgagtttagttttcaactcaagttcgactcatttggttcgtaaaccaagttcaacgaatcaattatcgaa 30919519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 1081214 - 1081308
Alignment:
Q  37 agctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggttcattg 131  Q
    ||||||||||||| |||||| |||  ||||| | ||| ||||| | ||||||||||||||||| | |||| |  || |||||| |||||||||||    
T  1081214 agctcaagttcaggtcatttagtttgtgaactatgtttaacgaataaattgtcgaatcgagttgcaaactttgttccagttggctcggttcattg 1081308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 37239848 - 37239910
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagt 72  Q
    |||||||  ||||| ||||| ||||| ||||||| ||||  ||||||||||||||||||||||    
T  37239848 ctcatttgattaacaaacttgattttaagctcaaattcatctcatttggttcatgaaccaagt 37239910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 28759500 - 28759439
Alignment:
Q  18 tttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacga 79  Q
    |||||||||||||||||||| ||||| ||||   |||||| ||||||| ||||||| |||||    
T  28759500 tttaacgaacttaattttcaactcaaattcaacccatttgattcatgagccaagttgaacga 28759439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 41449757 - 41449798
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctca 42  Q
    |||||| |||| |||||||||||||| |||||||||||||||    
T  41449757 caagttcagctaatttatttaacgaatttaattttcagctca 41449798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 37101225 - 37101162
Alignment:
Q  13 atttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaac 77  Q
    ||||||||||| ||||||||||||| ||||||||||  ||||||| ||| |||| | ||||||||    
T  37101225 atttatttaacaaacttaattttcaactcaagttca-ctcatttgattcgtgaatcgagttcaac 37101162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 1e-56; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 26632945 - 26633076
Alignment:
Q  9 gctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactat 108  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||    
T  26632945 gctcatttatttaacgaacttaattttcagctcaagttcagctcatttggttaatgagccaagttcaacgagttaattgtcgaatcgagttacgaactat 26633044  T
Q  109 tatcgagttggttcggttcattgccagcccta 140  Q
    ||||||||||||||||||||||||| ||||||    
T  26633045 tatcgagttggttcggttcattgccggcccta 26633076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 22184504 - 22184643
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||      
T  22184504 caagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtcc 22184603  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    | ||||||| ||||||||||||||||||||||||||||||    
T  22184604 caaactattgtcgagttggttcggttcattgccagcccta 22184643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 11055357 - 11055226
Alignment:
Q  9 gctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactat 108  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||    
T  11055357 gctcatttatttaacgaacttaattttccgctcaagttcagctcatttggttcatgaaccaagttcaatgagttaattatcgaatcgagttccgaactat 11055258  T
Q  109 tatcgagttggttcggttcattgccagcccta 140  Q
    | ||||||||||||||||||||| ||||||||    
T  11055257 tgtcgagttggttcggttcattgtcagcccta 11055226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 48151253 - 48151126
Alignment:
Q  13 atttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatc 112  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||| || |||||||||||||||||||||||||||| ||    
T  48151253 atttatttaacgaacttaattttcagctcaagttcagctcatttggtttgtgaaccaagttcaacaagataattgtcgaatcgagtttcgaactattgtc 48151154  T
Q  113 gagttggttcggttcattgccagcccta 140  Q
    |||||||||||  ||||||| |||||||    
T  48151153 gagttggttcgaatcattgcaagcccta 48151126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 51995079 - 51995212
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | ||| |||||||||| ||||||||||| ||||||||||| | ||||||||||||||||||||||||||||| |||||| ||||||||||| |    
T  51995079 caagttcaactcgtttatttaacaaacttaattttgagctcaagttcggctcatttggttcatgaaccaagttcaacgaattaattatcgaatcgagtct 51995178  T
Q  101 cgaactattatcgagttggttcggttcattgcca 134  Q
    ||||||||| ||||||||||||||||||||||||    
T  51995179 cgaactattttcgagttggttcggttcattgcca 51995212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 52813602 - 52813741
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| ||||||||| ||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||| ||| ||||      
T  52813602 caagttcagctcatttgtttaacgaacttaattttcagcttaagttcagctcgtttggttcatgaaccaagttcaacgagttaattgtcaaatagagtcc 52813701  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    | ||||||| ||||||||||||||||||||| || |||||    
T  52813702 caaactattgtcgagttggttcggttcattgtcaacccta 52813741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 8 - 137
Target Start/End: Original strand, 27891395 - 27891523
Alignment:
Q  8 agctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaacta 107  Q
    |||||||||||||||| || || ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27891395 agctcatttatttaacaaatttgattttcagctcaagttcagctcatttg-ttcatgaaccaagttcaacgagttaattgtcgaatcgagttccgaacta 27891493  T
Q  108 ttatcgagttggttcggttcattgccagcc 137  Q
    || |||||||| |||| ||||||| |||||    
T  27891494 ttgtcgagttgattcgattcattgtcagcc 27891523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 2 - 140
Target Start/End: Complemental strand, 50147056 - 50146918
Alignment:
Q  2 aagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttc 101  Q
    ||||| |||||| ||| || |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| | |||||||||||||| || |    
T  50147056 aagttcagctcaattagttcacgaacttaattttcagctcaagtccggttcatttggttcatgaaccaagttcaacgaatcaattgtcgaatcgaattac 50146957  T
Q  102 gaactattatcgagttggttcggttcattgccagcccta 140  Q
    ||||| | ||||| ||||||||||||||||| |||||||    
T  50146956 gaactttaatcgaattggttcggttcattgctagcccta 50146918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 10 - 134
Target Start/End: Complemental strand, 12673158 - 12673034
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 109  Q
    ||||||||||||| || ||||||||||| |||||||||   ||||||||||||||||||||||||||||||| |||| ||||||||| | ||||||||||    
T  12673158 ctcatttatttaatgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgagtcaattatcgaatcgaatctcgaactatt 12673059  T
Q  110 atcgagttggttcggttcattgcca 134  Q
     ||||||||||||||||||||||||    
T  12673058 ttcgagttggttcggttcattgcca 12673034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 12789691 - 12789552
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||| || || ||||||| ||||||||||||||  |||  | |||| |||| | |    
T  12789691 caagttcagctcatttaattaacgaacttaattttcagctcaagttcagctcgttaggttcataaaccaagttcaacggattagatatcgagtcgaatgt 12789592  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  12789591 cgaactataatcgagttggttcggttcattgccagcccta 12789552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 53369873 - 53370012
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| ||| || || ||||||||||||||||||||||  |||| | |||| | || | |    
T  53369873 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagttgaatgt 53369972  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  53369973 cgaactataatcgagttggttcggttcattgccagcccta 53370012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 36156433 - 36156303
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||| ||| || |||||||||||||||||||||||||| | |||||||||||| |||||||||||||||| | |||||||||||||| ||     
T  36156433 caagttcagctcaattagttgacgaacttaattttcagctcaagttcggctcatttggttcaagaaccaagttcaacgaatcaattgtcgaatcgaatta 36156334  T
Q  101 cgaactattatcgagttggttcggttcattg 131  Q
    |||||| | ||||||||||||||||||||||    
T  36156333 cgaactttaatcgagttggttcggttcattg 36156303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 36 - 140
Target Start/End: Original strand, 38791728 - 38791831
Alignment:
Q  36 cagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggttcattgccag 135  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || || | ||||||| |||||||||||||||||||||||||    
T  38791728 cagctcaagttcagctcatttggttcatgaaccaagttcaacgagttaattgtcgaattga-ttccaaactattgtcgagttggttcggttcattgccag 38791826  T
Q  136 cccta 140  Q
    |||||    
T  38791827 cccta 38791831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 8 - 140
Target Start/End: Complemental strand, 48731305 - 48731173
Alignment:
Q  8 agctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaacta 107  Q
    |||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||| |    ||||||||| |||| ||||||||||    
T  48731305 agctcatttaattaacgaacttaatttttagctcaagttcagtttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaatttcgaacta 48731206  T
Q  108 ttatcgagttggttcggttcattgccagcccta 140  Q
    |  ||||||||||||||||||||| ||||||||    
T  48731205 tattcgagttggttcggttcattggcagcccta 48731173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 48977577 - 48977716
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| |||||||| ||||||||||||||| || ||| ||||| ||||||||||| ||||||||||| |||| | |||| |||| | |    
T  48977577 caagttcagctcatttaattaacgaatttaattttcagctcatgtccagctcattaggttcatgaacgaagttcaacgaattaaatatcgagtcgaatgt 48977676  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||| ||| |||||||||||||||||||||||||||||||    
T  48977677 cgaattataatcgagttggttcggttcattgccagcccta 48977716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 50606009 - 50606148
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| ||| || || ||||||||||||||||||||||  |||  | |||| |||| | |    
T  50606009 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgt 50606108  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||||| ||||| |||||||||||||||||||||||||    
T  50606109 cgaactataatcgaattggttcggttcattgccagcccta 50606148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 19455297 - 19455159
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | ||||||||  |||| ||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||| ||||||||| ||||||||||    
T  19455297 caagttcaactcatttagataacaaacttaattttcaactcaagttcagctcatttgattcatgaaccaagttcaacgaattaattgtcaaatcgagttt 19455198  T
Q  101 cgaactattatcgagttggttcggttcattgccagccct 139  Q
    ||||||||| |||| |  | ||||||||||| |||||||    
T  19455197 cgaactattttcgaataagctcggttcattgtcagccct 19455159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 40797831 - 40797973
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||||||||||||||| ||||||||||| |||||||||   |||||||||||||||||||||||||| ||   |||| ||||||| ||| |    
T  40797831 caagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaatgaaccaattatcgaatcaagtat 40797930  T
Q  101 cgaactattatcgagttggttcggttcattgccagccctatcc 143  Q
    ||||||||| | ||||||||||||||||||||||| |||||||    
T  40797931 cgaactatttttgagttggttcggttcattgccagtcctatcc 40797973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 141
Target Start/End: Original strand, 80506 - 80638
Alignment:
Q  9 gctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactat 108  Q
    |||||||||||| |||| ||||||||||| |||||||||   |||||||||||||||||||||||||||||   ||||  |||||| | |||||||||||    
T  80506 gctcatttatttgacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgaaacaattaccgaatcaaatttcgaactat 80605  T
Q  109 tatcgagttggttcggttcattgccagccctat 141  Q
    | ||||||||| |||||||||||||||||||||    
T  80606 tttcgagttggatcggttcattgccagccctat 80638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 21441582 - 21441721
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| ||| || || ||||||||||||||||||||||  |||  | |||| |||| | |    
T  21441582 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgt 21441681  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||||| |||||||||||||||||||||| || |||||    
T  21441682 cgaactataatcgagttggttcggttcattgtcaacccta 21441721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 46944671 - 46944544
Alignment:
Q  13 atttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatc 112  Q
    ||||||||||||| ||||| ||||| |||||||||   ||||||||||||||||||||||||||||||  |||| ||||||||| | |||||||||| |     
T  46944671 atttatttaacgagcttaaatttcaactcaagttcgactcatttggttcatgaaccaagttcaacgagccaattatcgaatcgaatctcgaactattttt 46944572  T
Q  113 gagttggttcggttcattgccagcccta 140  Q
    ||||||||||||||||||| ||||||||    
T  46944571 gagttggttcggttcattgtcagcccta 46944544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 140
Target Start/End: Original strand, 56224158 - 56224285
Alignment:
Q  13 atttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatc 112  Q
    ||||| |||||||| |||||||||||||||||||| | |||||||||| || ||||||||||||||| |||||||| || || |||||||||||||  |     
T  56224158 atttaattaacgaatttaattttcagctcaagttcggctcatttggtttattaaccaagttcaacgaattaattgttgagtcaagtttcgaactatgttt 56224257  T
Q  113 gagttggttcggttcattgccagcccta 140  Q
    ||||||||||||||||||| ||||||||    
T  56224258 gagttggttcggttcattgtcagcccta 56224285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 31 - 140
Target Start/End: Complemental strand, 4274665 - 4274556
Alignment:
Q  31 attttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggttcatt 130  Q
    ||||| ||||||||||| | ||||||| |||||||| || |||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  4274665 atttttagctcaagttcggctcatttgtttcatgaatcaggttcaacgagataattgtcgaatcaagtttcgaactattttcgagttggttcggttcatt 4274566  T
Q  131 gccagcccta 140  Q
    || |||||||    
T  4274565 gctagcccta 4274556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 8 - 140
Target Start/End: Complemental strand, 15697215 - 15697083
Alignment:
Q  8 agctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaacta 107  Q
    |||||||| | ||||||||||||||||| ||||||||||||| | |||||||||||||| |||||||||||| | ||||||||| |||||| |||||||     
T  15697215 agctcattaagttaacgaacttaatttttagctcaagttcagcttatttggttcatgaatcaagttcaacgaatcaattgtcgagtcgagtctcgaactt 15697116  T
Q  108 ttatcgagttggttcggttcattgccagcccta 140  Q
    |  ||||||||  ||||||||||| ||||||||    
T  15697115 tattcgagttgtctcggttcattgtcagcccta 15697083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 36543782 - 36543922
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||  | | |||||||||||||||||||||||| |    ||||||||| |||| ||     
T  36543782 caagttcagctcatttaattaacgaacttaattttcagctcaagtttggcttatttggttcatgaaccaagttcaatggaccaattgtcgagtcgaatta 36543881  T
Q  101 cgaactattatcgagttggttcggttcattgccagccctat 141  Q
    ||||||||  |||||||||||| |||||||| |||||||||    
T  36543882 cgaactatattcgagttggttcagttcattgtcagccctat 36543922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 9469778 - 9469917
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||  | ||||||||||||||||||||||||||      ||||||||| |||| ||     
T  9469778 caagttcagctcatttaatcaacgaacttaattttcagctcaagtttggctcatttggttcatgaaccaagttcaatagaccaattgtcgagtcgaatta 9469877  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    ||||||||  ||||||||||||||||||||| ||||||||    
T  9469878 cgaactatattcgagttggttcggttcattgtcagcccta 9469917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 19852979 - 19853118
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| ||  || || ||||||||||||||||||||||  |||| | |||| |||| | |    
T  19852979 caagttcagctcatttaattaacgaacttaattttcagctcaagtccatctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 19853078  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    | |||||| |||||||||||||| ||||||| ||||||||    
T  19853079 caaactataatcgagttggttcgattcattgacagcccta 19853118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 45674836 - 45674975
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||||||| |||||||| |||||||||||||||||| ||| || || |||||||||||||||||| |||  |||  | |||| |||| | |    
T  45674836 caagttcaactcatttaattaacgaatttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcgacggattagatatcgagtcgaatgt 45674935  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  45674936 cgaactataatcgagttggttcggttcattgccagcccta 45674975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 49405766 - 49405635
Alignment:
Q  9 gctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactat 108  Q
    |||||||||||| |||| ||||||||||   ||||||||   ||||||||||||| ||||||||||||||| | ||||  ||||||||||||||||||||    
T  49405766 gctcatttatttgacgagcttaattttcgattcaagttcgactcatttggttcataaaccaagttcaacgaatcaattaccgaatcgagtttcgaactat 49405667  T
Q  109 tatcgagttggttcggttcattgccagcccta 140  Q
    | ||| ||||||||||||||||| ||||||||    
T  49405666 tttcgggttggttcggttcattgtcagcccta 49405635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 13761824 - 13761905
Alignment:
Q  25 aacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaact 106  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  13761824 aacttaattttcagctcaaattcagctcatttggttcatgaaccaagtccaacgagttaattgtcgaatcgagttccgaact 13761905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 28265809 - 28265673
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | ||||||| ||| |||||||||||||| | ||||  |||   || |||||||||||||||||||||||||| ||||||  |||||||||| |    
T  28265809 caagttcaactcatttgtttgacgaacttaattttaaactcagattc---tcgtttggttcatgaaccaagttcaacgaattaattaccgaatcgagtct 28265713  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  28265712 cgaactattttcgagttggttcagttcattgccagcccta 28265673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 134
Target Start/End: Complemental strand, 9222259 - 9222138
Alignment:
Q  11 tcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatta 110  Q
    ||||||||||||||| |||||||| || |||||||||   |||||||||   |||||||||||||||||   |||||||||||||||| ||||||||||     
T  9222259 tcatttatttaacgagcttaatttacaactcaagttcgactcatttggtg--tgaaccaagttcaacgaaccaattgtcgaatcgagtatcgaactattt 9222162  T
Q  111 tcgagttggttcggttcattgcca 134  Q
    ||||||||||||||||||||||||    
T  9222161 tcgagttggttcggttcattgcca 9222138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 51408088 - 51407949
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | ||||||| ||| |||||||||||||| | | || ||||   ||||||||||||||||||||||| ||||| ||||||  |||||||||| |    
T  51408088 caagttcaactcatttgtttgacgaacttaattttaaacccaggttcgactcatttggttcatgaaccaagttgaacgaattaattaccgaatcgagtct 51407989  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    ||||||||| |||||||||||| |||||||| ||||||||    
T  51407988 cgaactattttcgagttggttcagttcattgtcagcccta 51407949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 140
Target Start/End: Complemental strand, 48339237 - 48339099
Alignment:
Q  2 aagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttc 101  Q
    ||||| |||||| ||| || ||||||||||||||||||||||||||   ||||||| ||||||||||||||||||| | | | |||||||||||| || |    
T  48339237 aagttcagctcaattagttgacgaacttaattttcagctcaagttcgactcatttgattcatgaaccaagttcaacaaatcagttgtcgaatcgaattac 48339138  T
Q  102 gaactattatcgagttggttcggttcattgccagcccta 140  Q
    ||||| | || ||||||||||| ||||||| ||||||||    
T  48339137 gaactctaattgagttggttcgattcattgtcagcccta 48339099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 52733827 - 52733710
Alignment:
Q  13 atttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatc 112  Q
    ||||||||||||||||||||||||||||||| ||||  ||||||||||||||||  || ||||||||||||||| ||||||| | ||||||| ||||||     
T  52733827 atttatttaacgaacttaattttcagctcaa-ttcaactcatttggttcatgaattaaattcaacgagttaattatcgaatcaaatttcgaattattatt 52733729  T
Q  113 gagttggttcggttcattg 131  Q
     ||||||||| ||||||||    
T  52733728 aagttggttcagttcattg 52733710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 9959344 - 9959471
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||| ||||||||||||||||||||||||||||||           |||| ||||||||| ||||||||||||||| || | |||||||||||    
T  9959344 caagttcagcttatttatttaacgaacttaattttcagctca-----------tttgattcatgaac-aagttcaacgagttatttatagaatcgagttt 9959431  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    ||||||||| ||||||||||||||||||||| ||||||||    
T  9959432 cgaactattgtcgagttggttcggttcattgtcagcccta 9959471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 24008042 - 24007902
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||||||||||||||||||||||||| | |||||||| |  || || ||||||||||||||||||||||| | |||  || |||||| | |    
T  24008042 caagttcaactcatttatttaacgaacttaattttaaactcaagtttaactcgttaggttcatgaaccaagttcaacgaatcaatcatcaaatcgaatct 24007943  T
Q  101 cgaactattatcgagttggttcggttcattgccagccctat 141  Q
    ||||||||| ||||||||||||  ||||||| |||||||||    
T  24007942 cgaactattttcgagttggttcaattcattgtcagccctat 24007902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 8 - 144
Target Start/End: Original strand, 34718147 - 34718283
Alignment:
Q  8 agctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaacta 107  Q
    |||| |||||||||||||| ||||||||||||| ||||||   |||||| |||||| |||||| ||||||||||| | |||| ||||||||||| |||||    
T  34718147 agcttatttatttaacgaaattaattttcagctgaagttcgactcatttagttcataaaccaaattcaacgagttgactgtcaaatcgagtttcaaacta 34718246  T
Q  108 ttatcgagttggttcggttcattgccagccctatccg 144  Q
    || |||||||  ||||||||||| ||| |||| ||||    
T  34718247 ttgtcgagttatttcggttcattaccaaccctgtccg 34718283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 13455702 - 13455841
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | ||| |||||||||||||||||||||| ||||||||||    ||||||||||||| || |||||||||||| |||||| ||||||||| | |    
T  13455702 caagttcaactcgtttatttaacgaacttaattttgagctcaagttggactcatttggttcataaatcaagttcaacgaattaattatcgaatcgaatct 13455801  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    | || |||| || ||||||||||||| |||| ||||||||    
T  13455802 caaattattttcaagttggttcggtttattgtcagcccta 13455841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 44791375 - 44791256
Alignment:
Q  8 agctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaacta 107  Q
    |||||||||| |||||||||||||||||||| |||||| ||| || || ||||||||||||||||||||||  |||  | |||| |||| | ||||||||    
T  44791375 agctcatttaattaacgaacttaattttcagttcaagtgcagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaacta 44791276  T
Q  108 ttatcgagttggttcggttc 127  Q
    | ||||||||||||||||||    
T  44791275 taatcgagttggttcggttc 44791256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 55892124 - 55891985
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | ||||||| ||| |||||||||||||| | | || ||||   || |||||||||||||||||||||||||| ||||||  |||||||||| |    
T  55892124 caagttcaactcatttgtttgacgaacttaattttaaacccaggttcgactcgtttggttcatgaaccaagttcaacgaattaattaccgaatcgagtct 55892025  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    ||||||||| | |||||||||| |||||||| ||||||||    
T  55892024 cgaactatttttgagttggttcagttcattgtcagcccta 55891985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 54 - 140
Target Start/End: Original strand, 43387311 - 43387397
Alignment:
Q  54 tttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggttcattgccagcccta 140  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||    ||||||| ||||||||||||||||||||||||||||||    
T  43387311 tttggttcatgaaccaaattcaacgagttaattgtcgaatcaagtcctaaactattgtcgagttggttcggttcattgccagcccta 43387397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 128
Target Start/End: Complemental strand, 34980639 - 34980516
Alignment:
Q  5 tttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaa 104  Q
    |||| |||||||||||| |||  |||||||||| |||||||||  |||||||| |||||||| ||||||||| || | |||| ||||||||||| || ||    
T  34980639 tttaactcatttatttagcgagtttaattttcaactcaagttcgattcatttgattcatgaatcaagttcaatgaatcaattatcgaatcgagtctcaaa 34980540  T
Q  105 ctattatcgagttggttcggttca 128  Q
    ||||| ||||||||||| ||||||    
T  34980539 ctattttcgagttggtttggttca 34980516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 6866242 - 6866108
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||| ||| || |||||||||||||||||||||||||| | |||||||||||||||||||||||  |||| | |||| ||||||| |        
T  6866242 caagttcagctcaattagttgacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagtttgacgaatcaattatcgaatcaa---- 6866147  T
Q  101 cgaactattatcgagttggttcggttcattgccagccctat 141  Q
      |||| | |||||||||||||||||||||| || ||||||    
T  6866146 --aactttaatcgagttggttcggttcattgtcaaccctat 6866108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 48802607 - 48802475
Alignment:
Q  9 gctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagtt-aattgtcgaatcgagtttcgaacta 107  Q
    |||||||||||| |||| ||||||||||  |||||||||   |||||||||||||||| |||||||||  |  | |||   | |||||||||||||||||    
T  48802607 gctcatttatttgacgagcttaattttcgactcaagttcgactcatttggttcatgaatcaagttcaaaaaaatcaataaccaaatcgagtttcgaacta 48802508  T
Q  108 ttatcgagttggttcggttcattgccagcccta 140  Q
    || ||||||||||||||||||||| ||||||||    
T  48802507 ttttcgagttggttcggttcattgtcagcccta 48802475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 22721329 - 22721467
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||||||||||||||||||||||||| |||| |||||    || ||||||||||||||||||||||| ||  |||||  |||||||||||     
T  22721329 caagttcaactcatttatttaacgaacttaatttt-agcttaagtttgcctcgtttggttcatgaaccaagttcaatgaactaattaccgaatcgagttc 22721427  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||| |  ||||||||  ||| ||||||||||||||||    
T  22721428 cgaactttattcgagttgtctcgattcattgccagcccta 22721467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 52706218 - 52706357
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||||||| |||||||||||||| || ||||||||||| | || |||||||||||||||||||| |||||  |||||  ||| || ||||     
T  52706218 caagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagtttaacgaactaattaccgagtcaagttc 52706317  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||| | |  ||||||||  ||||||||||||||||||||    
T  52706318 cgaattttattcgagttgtatcggttcattgccagcccta 52706357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 7505530 - 7505668
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||||||| |||||||| |||||||| ||||||||||| | |||||||||||||||| ||||||||||||  |||||  ||| || ||||     
T  7505530 caagttcaactcatttagttaacgaatttaatttttagctcaagttcggctcatttggttcatgaatcaagttcaacgaactaattaccgagtcaagttc 7505629  T
Q  101 cgaactattatcgagttggttcggttcattgccagccct 139  Q
     ||||| |  ||||||||  ||||||||||| |||||||    
T  7505630 tgaactttattcgagttgtatcggttcattgtcagccct 7505668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 43812196 - 43812098
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtt 99  Q
    |||||| |||||| ||| || ||||||||||||||||| | |||||| |  ||||||||||||||||||||||| |||| | |||||||||||||||||    
T  43812196 caagttcagctcaattagtttacgaacttaattttcagtttaagttcggcccatttggttcatgaaccaagttcgacgaatcaattgtcgaatcgagtt 43812098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 16742464 - 16742337
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||||||||||||||||||||||| ||||           |||||||||||||||||||||||||| | ||||| |||||||||||     
T  16742464 caagttcagctcatttatttaacgaacttaattttcaactca-----------tttggttcatgaaccaagttcaacgaatcaattgccgaatcgagttc 16742376  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
     ||||||||||||| |  ||| |||||||| |||||||||    
T  16742375 tgaactattatcgaatgagtttggttcatt-ccagcccta 16742337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 49820983 - 49821060
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacg 78  Q
    |||||| |||||||||| |||||||||||||||||||||| |||| ||| || || ||||||||||||||||||||||    
T  49820983 caagttcagctcatttaattaacgaacttaattttcagcttaagtccagctcgttaggttcatgaaccaagttcaacg 49821060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 1803499 - 1803633
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||||||||||||||| ||||||||| | |||||||||   ||||| |||||||||| |||||| ||||| | |||| |||||||     |    
T  1803499 caagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaagtttaacgaatcaattatcgaatc-----t 1803593  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    || ||| || ||||||||||||||||||||| ||||||||    
T  1803594 cgcactcttttcgagttggttcggttcattgtcagcccta 1803633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 25134575 - 25134646
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagt 72  Q
    |||||| | |||||||||||||||||||||||||||| |||||||||   ||||||||||||||||||||||    
T  25134575 caagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccaagt 25134646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 44378251 - 44378379
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||||||||||||||| ||||||||||| | ||| ||||  ||||||||||||||||||||||||||            |||||||||| |    
T  44378251 caagttcaactcatttatttaacgagcttaattttcaacccaaattcaactcatttggttcatgaaccaagttcaa------------cgaatcgagtct 44378338  T
Q  101 cgaactattatcgagttggttcggttcattgccagccctat 141  Q
    | ||||||| |||| |||||||||||||||| |||||||||    
T  44378339 caaactattttcgaattggttcggttcattggcagccctat 44378379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 49083366 - 49083243
Alignment:
Q  8 agctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaacta 107  Q
    |||||||||| |||||||| ||||||||||| |||||||||  ||||| |||| ||||||||||||||||    ||||| |||| || | |||| |||||    
T  49083366 agctcatttaattaacgaatttaattttcagatcaagttcaactcattaggtttatgaaccaagttcaacagactaattatcgagtccaatttcaaacta 49083267  T
Q  108 ttatcgagttggttcggttcattg 131  Q
    || || |||||||||| |||||||    
T  49083266 ttctcaagttggttcgattcattg 49083243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 32397837 - 32397707
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||| ||| || |||||||||||||| || |||||||| | | ||||| ||||||||||||||||  ||| | ||||||||| |||| ||     
T  32397837 caagttcagctcaattagttgacgaacttaatttttagttcaagttcggcttatttgattcatgaaccaagttcggcgaatcaattgtcgagtcgaatta 32397738  T
Q  101 cgaactattatcgagttggttcggttcattg 131  Q
    |||||| | ||||| ||||||||||| ||||    
T  32397737 cgaactttaatcgaattggttcggtttattg 32397707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 51 - 141
Target Start/End: Complemental strand, 36644073 - 36643984
Alignment:
Q  51 tcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggttcattgccagccctat 141  Q
    ||||||||||||||||| |||||||| ||||||||| || ||| |||| |||||||||| | |||||||||||||| |||| |||||||||    
T  36644073 tcatttggttcatgaacaaagttcaatgagttaattatcaaat-gagtctcgaactattttggagttggttcggttgattgtcagccctat 36643984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 5762673 - 5762606
Alignment:
Q  12 catttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacga 79  Q
    ||||||||||||||| ||||||||||||||||  |||  |||||||||||||||||||||||| ||||    
T  5762673 catttatttaacgaatttaattttcagctcaaactcaactcatttggttcatgaaccaagttcgacga 5762606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 5769243 - 5769176
Alignment:
Q  12 catttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacga 79  Q
    ||||||||||||||| |||||||||||||||| ||||   ||||||||||||||||||||||| ||||    
T  5769243 catttatttaacgaatttaattttcagctcaaattcaacccatttggttcatgaaccaagttcgacga 5769176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 28470820 - 28470949
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctca-agttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtt 99  Q
    |||||| ||||||||||||||| ||| ||||||| ||| ||| | || | | |||||||||||||||||||||||||||| ||||||  ||||||||| |    
T  28470820 caagttcagctcatttatttaatgaaattaatttacagttcacaattgact-catttggttcatgaaccaagttcaacgaattaattaccgaatcgag-t 28470917  T
Q  100 tcgaactattatcgagttggttcggttcattg 131  Q
    ||| ||| || |||||||||||  ||||||||    
T  28470918 tcgtacttttttcgagttggtttagttcattg 28470949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 5764702 - 5764634
Alignment:
Q  11 tcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacga 79  Q
    |||||||||||||||| ||||||||||||||||  |||  | |||||||||||||||||||||| ||||    
T  5764702 tcatttatttaacgaatttaattttcagctcaaactcaacttatttggttcatgaaccaagttcgacga 5764634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 5766946 - 5766878
Alignment:
Q  11 tcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacga 79  Q
    |||||||||||||||| ||||||||||||||||  |||  | |||||||||||||||||||||| ||||    
T  5766946 tcatttatttaacgaatttaattttcagctcaaactcaacttatttggttcatgaaccaagttcgacga 5766878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 41857213 - 41857153
Alignment:
Q  19 ttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacga 79  Q
    ||||| |||||||| ||||||| ||||||||||||||||||||||||||||| | ||||||    
T  41857213 ttaacaaacttaatcttcagcttaagttcagttcatttggttcatgaaccaaatacaacga 41857153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 53520744 - 53520676
Alignment:
Q  5 tttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagtt 73  Q
    |||| |||||||||||||| |||| ||||||| || |||| ||||||||| ||||||||||||||||||    
T  53520744 tttatctcatttatttaacaaactcaattttcggcccaagctcagttcatgtggttcatgaaccaagtt 53520676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 15564253 - 15564194
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggtt 60  Q
    ||||||| ||||||||||||||| |||||||||||||  | |||||||||||||||||||    
T  15564253 caagtttggctcatttatttaacaaacttaattttcaatttaagttcagttcatttggtt 15564194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 15576900 - 15576841
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggtt 60  Q
    ||||||| ||||||||||||||| |||||||||||||  | |||||||||||||||||||    
T  15576900 caagtttggctcatttatttaacaaacttaattttcaatttaagttcagttcatttggtt 15576841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 140
Target Start/End: Complemental strand, 38493083 - 38492988
Alignment:
Q  45 ttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggttcattgccagcccta 140  Q
    ||||| |||||||||||||||||||| |||||| ||||||||||||| ||||  ||||||| ||  | |||||   |||||||||||| |||||||    
T  38493083 ttcagctcatttggttcatgaaccaaattcaacaagttaattgtcgagtcgaacttcgaaccatatttgagttaactcggttcattgctagcccta 38492988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 39736688 - 39736815
Alignment:
Q  5 tttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaa 104  Q
    |||| ||| |||||||||| ||||||||||| |  ||||||||   | ||||||| | |||||||| |||||||| | |||| ||||||||||| || ||    
T  39736688 tttaactcgtttatttaacaaacttaatttttaattcaagttcgacttatttggtccgtgaaccaaattcaacgaatcaattatcgaatcgagtctcaaa 39736787  T
Q  105 ctattatcgagttggttcggttcattgc 132  Q
    ||||| |||||||| ||| ||| |||||    
T  39736788 ctattttcgagttgattcagtttattgc 39736815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 43798362 - 43798255
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | ||||||||||||| || ||| |||||   |||||| ||   |||||||||||| ||||| ||||||||||||||||| ||||||||||| |    
T  43798362 caagttcaactcatttatttaatgatcttcattttttactcaagctcgactcatttggttcaagaaccgagttcaacgagttaattatcgaatcgagtct 43798263  T
Q  101 cgaactat 108  Q
    | ||||||    
T  43798262 caaactat 43798255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 136
Target Start/End: Complemental strand, 9874306 - 9874212
Alignment:
Q  42 aagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggttcattgccagc 136  Q
    |||||| | |||||||||||||| ||||| |||||||| ||||||   ||||||| | | |||||||| | ||||||||||||||||||| ||||    
T  9874306 aagttcggctcatttggttcatgtaccaatttcaacgaattaattactgaatcgaatcttgaactatttttgagttggttcggttcattgtcagc 9874212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 53369689 - 53369733
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagt 45  Q
    |||||| |||||||||| |||||||||||||||||||||||||||    
T  53369689 caagttcagctcatttaattaacgaacttaattttcagctcaagt 53369733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 5728809 - 5728742
Alignment:
Q  12 catttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacga 79  Q
    ||||||||||||||| |||||||| |||||||  |||  ||||||||||||| |||||||||| ||||    
T  5728809 catttatttaacgaatttaatttttagctcaaactcaactcatttggttcattaaccaagttcgacga 5728742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 50710833 - 50710784
Alignment:
Q  91 aatcgagtttcgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||||| |||||||||| |||||||| |||||||||||| ||||||||    
T  50710833 aatcgagtatcgaactattttcgagttgattcggttcattgtcagcccta 50710784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 141
Target Start/End: Original strand, 25134665 - 25134703
Alignment:
Q  103 aactattatcgagttggttcggttcattgccagccctat 141  Q
    ||||||| ||||||||||||||||||||| |||||||||    
T  25134665 aactattttcgagttggttcggttcattgtcagccctat 25134703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 50710897 - 50710840
Alignment:
Q  13 atttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaa 70  Q
    ||||||||||||| ||||||||||| ||||| |||   ||||||| ||||||||||||    
T  50710897 atttatttaacgagcttaattttcaactcaatttcgactcatttgattcatgaaccaa 50710840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 25102727 - 25102667
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaa 70  Q
    |||||||||||||| |  ||||| |||| ||||| ||| | ||||||||||||||||||||    
T  25102727 ctcatttatttaacaagtttaatgttcaactcaatttcggctcatttggttcatgaaccaa 25102667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 50137407 - 50137479
Alignment:
Q  14 tttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaatt 86  Q
    ||||||||||||  |||||||||| |||||||||   |||| |||||||| ||||||  ||||||| ||||||    
T  50137407 tttatttaacgagtttaattttcacctcaagttcgactcatctggttcataaaccaaaatcaacgaattaatt 50137479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 5e-56; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 1501850 - 1501988
Alignment:
Q  2 aagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttc 101  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  1501850 aagtttggctcatttatttaacgaacttaattttcagctcaagttcggttcatttggttcatgaacgaagttcaacgagttaattgtcaaatcgagtttc 1501949  T
Q  102 gaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||| ||| ||||||||||||||||||||| ||||||||    
T  1501950 gaacaattgtcgagttggttcggttcattgtcagcccta 1501988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 4441440 - 4441301
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||| |||||| |||| |||||||||||||||||| |||||||||||||||||||    
T  4441440 caagttcagctcatttatttaacgaacttaattttcaactcaagttcagctcatttagttcgtgaaccaagttcaacgagctaattgtcgaatcgagttt 4441341  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    ||||||||| ||||||||||||||||||||||| ||||||    
T  4441340 cgaactattgtcgagttggttcggttcattgccggcccta 4441301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 3081857 - 3081718
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| ||||||| ||||||||||| |||||||||   ||||||||||| |||||||||||||||||   |||| ||||||||||| |    
T  3081857 caagttcagctcatttaattaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgaaccaattatcgaatcgagtat 3081758  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  3081757 cgaactattttcgagctggttcggttcattgccagcccta 3081718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 5640391 - 5640252
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||| ||| || ||||||||||||||||| |||||||| | |||||||||||||||||||||||| |||| | |||| ||||||||| ||     
T  5640391 caagttcagctcaattagttgacgaacttaattttcagttcaagttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaatcgaatta 5640292  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||| | |||||||||||||||||||||||||||||||    
T  5640291 cgaactctaatcgagttggttcggttcattgccagcccta 5640252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 17441168 - 17441298
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 109  Q
    ||||||||||| |||| ||||||||||| ||||||||||  ||||||||||||||||| ||||||||||| ||||||  | |||||||||||||||||||    
T  17441168 ctcatttatttgacgagcttaattttcaactcaagttcaactcatttggttcatgaactaagttcaacgaattaattaccaaatcgagtttcgaactatt 17441267  T
Q  110 atcgagttggttcggttcattgccagcccta 140  Q
     ||| |||||||||||||||||||| |||||    
T  17441268 ttcgggttggttcggttcattgccaacccta 17441298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 10961935 - 10961795
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||| ||| || |||||||||||||||||||||| |||   ||||||||||||||||||||||||||||| | |||||||||||| | ||     
T  10961935 caagttcagctcaattagttgacgaacttaattttcagctcaaattcgactcatttggttcatgaaccaagttcaacgaatcaattgtcgaatcaaatta 10961836  T
Q  101 cgaactattatcgagttggttcggttcattgccagccctat 141  Q
    | |||| | ||||||||||||||||||||||||||||||||    
T  10961835 caaactttaatcgagttggttcggttcattgccagccctat 10961795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 13312023 - 13312164
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgag--t 98  Q
    |||||| | |||||||||||||||||||||||||||| |||||||||   |||||||||||||||||||||| ||| ||   |||| ||||||||||  |    
T  13312023 caagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcgagtat 13312122  T
Q  99 ttcgaactattatcgagttggttcggttcattgccagcccta 140  Q
     |||||||||| ||||||||||||||||||||||||||||||    
T  13312123 atcgaactattttcgagttggttcggttcattgccagcccta 13312164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 6999268 - 6999407
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| || |||||| |||||| ||||||||||||||||||||||||| |||||| |||||| ||||||||||||||| |||||| ||||||||||| |    
T  6999268 caagttcagttcatttgtttaacaaacttaattttcagctcaagttcagctcatttagttcattaaccaagttcaacgaattaattatcgaatcgagtct 6999367  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    | ||||||| |||||||| |||| || |||| | ||||||    
T  6999368 caaactattgtcgagttgcttcgatttattgtctgcccta 6999407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 7437305 - 7437444
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||||||||||| ||||||||||| || ||||||   ||||||||||| |||||||||||||||||    ||| ||||||||||| |    
T  7437305 caagttcagctcatttatttaacgagcttaattttcaactaaagttcgactcatttggttcgtgaaccaagttcaacgaacccattatcgaatcgagtat 7437404  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    ||||||||| ||||||| |||||||||||| |||||||||    
T  7437405 cgaactattttcgagttagttcggttcattaccagcccta 7437444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 11460145 - 11460014
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||||||||| ||||||||| |||||||||        |||||||||||||||||||||||||||| | |||| ||||||||||||     
T  11460145 caagttcagctcatttatttaacaaacttaattctcagctcaa--------catttggttcatgaaccaagttcaacgaatcaattatcgaatcgagttc 11460054  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    ||||||||||| ||||||| |||||||||||||| |||||    
T  11460053 cgaactattattgagttggatcggttcattgccaacccta 11460014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 10346722 - 10346861
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| ||| || || ||||||||||||||||||||||  |||  | | || |||| | |    
T  10346722 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatagagtcgaatgt 10346821  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||||| ||||| |||||| ||||||||||||||||||    
T  10346822 cgaactataatcgatttggtttggttcattgccagcccta 10346861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 32163542 - 32163635
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatc 94  Q
    |||||| |||||||||| ||||||||||||||||||| |||||||| || ||||| ||||||||||||| ||||||| ||||||||||||||||    
T  32163542 caagttaagctcatttagttaacgaacttaattttcaactcaagtttagctcattaggttcatgaaccatgttcaaccagttaattgtcgaatc 32163635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 9950899 - 9950760
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||| ||| || |||||||||||||||| ||||||||| | |||||||||||||||||||||||| | || | | |||||||||| | ||     
T  9950899 caagttcagctcaattagttgacgaacttaattttcaactcaagttcggctcatttggttcatgaaccaagttcgatgaatcatttgtcgaatcaaatta 9950800  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
     ||||| | ||||||||| |||| ||||||||||||||||    
T  9950799 tgaactttaatcgagttgattcgattcattgccagcccta 9950760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 137
Target Start/End: Original strand, 33110468 - 33110595
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 109  Q
    |||||||| |||||||||||||| || |||| |||||| | || ||||||||||||||||||||||||||  |||||  ||| ||||||| |||||| |     
T  33110468 ctcatttagttaacgaacttaatctttagcttaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagtcgagttccgaacttta 33110567  T
Q  110 atcgagttggttcggttcattgccagcc 137  Q
     ||||||||  |||||||||||||||||    
T  33110568 ttcgagttgtatcggttcattgccagcc 33110595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 18095520 - 18095650
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||||||||||||||||||||||||| | |||||||||   | ||||||||| ||||||||||||||||| |  ||| ||||||||||| |    
T  18095520 caagttcatctcatttatttaacgaacttaatttttaactcaagttcgacttatttggttcgtgaaccaagttcaacgaatccattatcgaatcgagtct 18095619  T
Q  101 cgaactattatcgagttggttcggttcattg 131  Q
    | |||| || | ||||||||| |||||||||    
T  18095620 caaactttttttgagttggtttggttcattg 18095650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 18099817 - 18099947
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||||||||||||||||||||||| | | ||||| |||   ||||||||||| ||||||||||||||||| |  ||| ||||||||||| |    
T  18099817 caagttcatctcatttatttaacgaacttaattgttaactcaaattcgactcatttggttcgtgaaccaagttcaacgaatccattatcgaatcgagtct 18099916  T
Q  101 cgaactattatcgagttggttcggttcattg 131  Q
    | |||| || ||||||||||| |||||||||    
T  18099917 caaacttttttcgagttggtttggttcattg 18099947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 12428896 - 12429010
Alignment:
Q  9 gctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactat 108  Q
    ||||||||||||||||||||||||||||||||||            ||||||||| ||||||||||||| |||| |||||||| |||||||  |||||||    
T  12428896 gctcatttatttaacgaacttaattttcagctcag-----------ttggttcataaaccaagttcaacaagttcattgtcgagtcgagttctgaactat 12428984  T
Q  109 tatcgagttggttcggttcattgcca 134  Q
      | ||||||||||||||||||||||    
T  12428985 atttgagttggttcggttcattgcca 12429010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 27985029 - 27984931
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtt 99  Q
    |||||| |||||| ||| || || |||||||||||||| |||||||| | ||||||||||||| |||||||||| |||| | ||||||||||| |||||    
T  27985029 caagttcagctcaattagtttacaaacttaattttcagttcaagttcggctcatttggttcataaaccaagttcgacgaatcaattgtcgaattgagtt 27984931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 9463474 - 9463360
Alignment:
Q  20 taacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttgg 119  Q
    |||||||||||||||| || | || ||||| ||||||||||||| ||| ||||| || ||||||||| |||| ||||||| |||||| |  |||||| |     
T  9463474 taacgaacttaatttttagtttaaattcagctcatttggttcataaactaagtttaatgagttaattatcgagtcgagttccgaactttattcgagtagt 9463375  T
Q  120 ttcggttcattgcca 134  Q
     ||||||||||||||    
T  9463374 ctcggttcattgcca 9463360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 8596927 - 8596858
Alignment:
Q  49 gttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttg 118  Q
    |||||||| ||||||||| ||| ||| |||||||||||||||| ||||||||||||||||  ||||||||    
T  8596927 gttcatttagttcatgaatcaaattcgacgagttaattgtcgagtcgagtttcgaactatattcgagttg 8596858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 140
Target Start/End: Original strand, 8200688 - 8200771
Alignment:
Q  57 ggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||||||| |||||||||||  |||| | |||| |||| | ||||||||| |||||||||||| ||||||||| ||||||||    
T  8200688 ggttcatgaatcaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggtttggttcattgtcagcccta 8200771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 17507384 - 17507282
Alignment:
Q  25 aacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcgg 124  Q
    ||||||||||||||||||| || || ||||||  |||||||| ||| |||||| |||||||| || ||||||||||| |||   |||| | |||||||||    
T  17507384 aacttaattttcagctcaaattgagctcatttaattcatgaatcaaattcaacaagttaattatcaaatcgagtttcaaacagctatcaaattggttcgg 17507285  T
Q  125 ttc 127  Q
    |||    
T  17507284 ttc 17507282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 22295928 - 22295989
Alignment:
Q  12 catttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagtt 73  Q
    |||||| |||||||||||||| || ||||||||||| | || ||||||||||||||||||||    
T  22295928 catttacttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagtt 22295989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 43
Target Start/End: Complemental strand, 13355757 - 13355722
Alignment:
Q  8 agctcatttatttaacgaacttaattttcagctcaa 43  Q
    |||||||||| |||||||||||||||||||||||||    
T  13355757 agctcatttaattaacgaacttaattttcagctcaa 13355722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 2962840 - 2962782
Alignment:
Q  2 aagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggtt 60  Q
    |||||| ||||||||||||||| ||||||||||||| ||||| || |  ||||||||||    
T  2962840 aagtttggctcatttatttaactaacttaattttcaactcaaatttaactcatttggtt 2962782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 10474435 - 10474363
Alignment:
Q  53 atttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggtt 126  Q
    |||||||||||||||||||| ||||| |||||||  |||||||||  || ||||  | ||||||||||||||||    
T  10474435 atttggttcatgaaccaagtgcaacg-gttaattaccgaatcgagactcaaactgctttcgagttggttcggtt 10474363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 2156010 - 2156066
Alignment:
Q  11 tcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaac 67  Q
    ||||||| ||||| |||| ||||||||| ||||||| |  |||||||||||||||||    
T  2156010 tcatttagttaacaaactaaattttcagatcaagtttaactcatttggttcatgaac 2156066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 26263845 - 26263909
Alignment:
Q  19 ttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagtta 83  Q
    |||| ||| |||||||||| ||||||||||    ||||| || ||||||||||||||||||||||    
T  26263845 ttaaagaatttaattttcaactcaagttcaaccaatttgattaatgaaccaagttcaacgagtta 26263909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 108; Significance: 3e-54; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 1840826 - 1840687
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||     
T  1840826 caagttcagctcatttatttcacgaacttaattttcagctcaagttcagctcatttggttcatgaaccaagttcaacgagttaattgtcgaattgagttc 1840727  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
     |||||||| |||||||||||||||||||||||| |||||    
T  1840726 tgaactattgtcgagttggttcggttcattgccaacccta 1840687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 19282253 - 19282123
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| ||||||| || ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||     
T  19282253 caagttcagctcatctacttaacgaacctaattttcagctcaagttcagctcatttggttcatgaaccaagttcaacgagttaattgtcgaatgaagttc 19282154  T
Q  101 cgaactattatcgagttggttcggttcattg 131  Q
    |||||||||||||||||||||| | ||||||    
T  19282153 cgaactattatcgagttggttcagctcattg 19282123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 3801503 - 3801364
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||   ||||||||| |||| ||     
T  3801503 caagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaatgaaccaattgtcgagtcgaatta 3801404  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    ||||||||  ||||||||||||||||||||||||||||||    
T  3801403 cgaactatattcgagttggttcggttcattgccagcccta 3801364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 39414182 - 39414312
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaa-gttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtt 99  Q
    |||||| |||||||||||||||||||||||||||| | || || |||||| ||||| |||||||| ||||||||||||||||||||||||||||  ||||    
T  39414182 caagttcagctcatttatttaacgaacttaatttttaacttaaagttcagctcattaggttcatggaccaagttcaacgagttaattgtcgaattaagtt 39414281  T
Q  100 tcgaactattatcgagttggttcggttcatt 130  Q
    |||||||||| ||||||||||||||||||||    
T  39414282 tcgaactattgtcgagttggttcggttcatt 39414312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 27906099 - 27906239
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| ||| || || ||||||||||||||||||||||  |||  | |||| |||| | |    
T  27906099 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgt 27906198  T
Q  101 cgaactattatcgagttggttcggttcattgccagccctat 141  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  27906199 cgaactataatcgagttggttcggttcattgccagccctat 27906239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 40056495 - 40056382
Alignment:
Q  8 agctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaacta 107  Q
    |||||||||||||||||||||||||||||| ||||| || |  | |||||||||||||||||| ||||||||| ||||||||||||||| |||| |||||    
T  40056495 agctcatttatttaacgaacttaattttcatctcaaatttaacttatttggttcatgaaccaaattcaacgagataattgtcgaatcgaatttcaaacta 40056396  T
Q  108 ttatcgagttggtt 121  Q
    ||||||||||||||    
T  40056395 ttatcgagttggtt 40056382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 15933169 - 15933303
Alignment:
Q  9 gctcatttatttaacgaacttaatt---ttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaac 105  Q
    ||||||||||||||||||||||||    || |||||| |||||  ||||| ||||||||||||||||||||||| |||| |||||| |||| ||||||||    
T  15933169 gctcatttatttaacgaacttaatagtatttagctcatgttcaactcattaggttcatgaaccaagttcaacgaattaactgtcgagtcgaatttcgaac 15933268  T
Q  106 tattatcgagttggttcggttcattgccagcccta 140  Q
    |||  ||||||||||||||||||||||||||||||    
T  15933269 tatactcgagttggttcggttcattgccagcccta 15933303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 31021871 - 31022003
Alignment:
Q  8 agctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaacta 107  Q
    |||||||||| ||||| ||||||||||  ||||||| ||||| ||||||||||||||||||||  |||||||||||||| |||| ||||||| |||||||    
T  31021871 agctcatttagttaacaaacttaatttcaagctcaaattcagctcatttggttcatgaaccaaactcaacgagttaattatcgagtcgagttccgaacta 31021970  T
Q  108 ttatcgagttggttcggttcattgccagcccta 140  Q
    |  ||||||||||||||||||||| ||| ||||    
T  31021971 tattcgagttggttcggttcattgtcagtccta 31022003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 27196078 - 27196217
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | ||| ||||| |||||| ||||||||||| |||||||||   |||||||||||||||||||| || ||||| | |||| ||||||||||| |    
T  27196078 caagttcaactcctttatctaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaaatttaacgaatcaattatcgaatcgagtct 27196177  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    ||||||||| ||||||||||||||||||||| ||||||||    
T  27196178 cgaactattttcgagttggttcggttcattgtcagcccta 27196217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 32945152 - 32945021
Alignment:
Q  9 gctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactat 108  Q
    |||||||||||| |||| |||||||||   |||||||||   ||||||||||||||||||||||| ||||| | ||||  ||||||||||||||||||||    
T  32945152 gctcatttatttgacgagcttaatttttgactcaagttcgactcatttggttcatgaaccaagtttaacgaatcaattaccgaatcgagtttcgaactat 32945053  T
Q  109 tatcgagttggttcggttcattgccagcccta 140  Q
    | ||||||||||||||||||||| ||||||||    
T  32945052 tttcgagttggttcggttcattgtcagcccta 32945021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 38523000 - 38522861
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||  | |||||||||||||||||||||||||| |    |||| |||| || | ||     
T  38523000 caagttcagctcatttaattaacgaacttaattttcagctcaagtttggctcatttggttcatgaaccaagttcaatggaccaattatcgagtcaaatta 38522901  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    ||||||||  ||||||||||||||||||||||||||||||    
T  38522900 cgaactatattcgagttggttcggttcattgccagcccta 38522861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 27450720 - 27450580
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||||||||||||||| ||||||||| | |||||||||   ||||| |||||||||| ||| |||||||| | |||| ||||||||| | |    
T  27450720 caagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaaattcaacgaatcaattatcgaatcgaatct 27450621  T
Q  101 cgaactattatcgagttggttcggttcattgccagccctat 141  Q
    || |||||| |||||||||||||||||||||||||||||||    
T  27450620 cgcactattttcgagttggttcggttcattgccagccctat 27450580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 10493986 - 10494125
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||||||||||| ||||||||||| |||||||||   ||||||||||  |||||||||||||||||   |||| | ||||||| | |    
T  10493986 caagttcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggtttgtgaaccaagttcaacgaaccaattattgaatcgaatat 10494085  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    | ||||||| | ||||||||||||||||||||||||||||    
T  10494086 caaactatttttgagttggttcggttcattgccagcccta 10494125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 18880193 - 18880328
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| |||||||||||||||||||||| |||| ||| || || ||||||||||||||||||||||  |||  | |||| |||| | |    
T  18880193 caagttcagctcatttaattaacgaacttaattttcagcttaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgt 18880292  T
Q  101 cgaactattatcgagttggttcggttcattgccagc 136  Q
    |||||||| |||||||||||||||||||||| ||||    
T  18880293 cgaactataatcgagttggttcggttcattgtcagc 18880328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 31620869 - 31621008
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| |||||||||||||| ||||||| |||||||  ||||| |||||||||||||| ||||| |   |||||||||| |||| |||    
T  31620869 caagttcagctcatttaattaacgaacttaatattcagctgaagttcaactcattaggttcatgaaccaaattcaatggactaattgtcgagtcgaattt 31620968  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    ||||||||  || |||||||||||||||||| ||||||||    
T  31620969 cgaactatattcaagttggttcggttcattgtcagcccta 31621008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 20188974 - 20189113
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||| ||| || |||||||||||||| || |||||||| | |||||||||||||||||||||||| |||| | |||| ||||||| | ||     
T  20188974 caagttcagctcaattagttgacgaacttaatttttagttcaagttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaatcaaatta 20189073  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||| | ||||||||| |||||||||||| ||||||||    
T  20189074 cgaactctaatcgagttgattcggttcattgtcagcccta 20189113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 26218048 - 26218187
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||||| |||||||| |||||||||||||| || ||||||||||| | || ||||||||||||||||||||||||||  |||||  ||| |||||||     
T  26218048 caagtttaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagtcgagttc 26218147  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||| |  | ||||||  ||||||||||||||||||||    
T  26218148 cgaactttatttgagttgtatcggttcattgccagcccta 26218187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 29328045 - 29328183
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| ||| |  || |||||||||| |||||||||||  |||| | |||| |||| | |    
T  29328045 caagttaagctcatttaattaacgaacttaattttcagctcaagtccagctg-ttaggttcatgaatcaagttcaacggattaaatatcgagtcgaatgt 29328143  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||||| |||||||| ||||||||||||| ||||||||    
T  29328144 cgaactataatcgagtttgttcggttcattgtcagcccta 29328183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 39407407 - 39407546
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||||||||||||||| ||||||||| | |||||||||   ||||| |||||||||| |||||||||||| | |||| ||||||||| | |    
T  39407407 caagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatct 39407506  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    || |||||| | |||||||||||||||||| |||||||||    
T  39407507 cgcactatttttgagttggttcggttcattaccagcccta 39407546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 41783326 - 41783465
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||||||| |||||||||||||| || ||||||||||| | |||||||||||||||||||||||||||||  |||||  ||| |||||||     
T  41783326 caagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcatttggttcatgaaccaagttcaacgaactaattaccgagtcgagttc 41783425  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||| |  ||||||||  ||||||||||| ||||||||    
T  41783426 cgaactttattcgagttgtatcggttcattgtcagcccta 41783465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 34719796 - 34719657
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||||||||||||||| ||||||||| | |||||||||   |||||  ||||||||| |||||||||||| | |||| ||||||| | | |    
T  34719796 caagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaagttcatgaatcaagttcaacgaatcaattatcgaatcaaatct 34719697  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    || |||||| ||||||||||||| ||||||||||||||||    
T  34719696 cgcactattttcgagttggttcgtttcattgccagcccta 34719657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 26298321 - 26298451
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 109  Q
    |||||||||||||||| ||||||||| | ||||||||    ||||| |||||||||| |||||||||||| | |||| ||||||||| | ||  ||||||    
T  26298321 ctcatttatttaacgagcttaattttaaactcaagtttgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatcgaatctcacactatt 26298420  T
Q  110 atcgagttggttcggttcattgccagcccta 140  Q
     | ||||||||||||||||||||||||||||    
T  26298421 tttgagttggttcggttcattgccagcccta 26298451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 14500845 - 14500709
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||||| | |||||||||||||| || ||||||||||| | || ||||||||||||||||||||||||||  ||||| |||| |||||||     
T  14500845 caagttcaactcattcagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattatcgagtcgagttc 14500746  T
Q  101 cgaactattatcgagttggttcggttcattgccagcc 137  Q
    |||||| |  ||||||||  |||||||||| ||||||    
T  14500745 cgaactgtattcgagttgtatcggttcatttccagcc 14500709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 10327931 - 10328070
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    ||||||||  ||||||||||  |||  ||||| |||  ||||||||   ||||||||||||||||| |||||||||||| | ||||  ||||||||||||    
T  10327931 caagtttaattcatttatttgtcgagtttaatattcgactcaagtttgattcatttggttcatgaatcaagttcaacgaatcaattaccgaatcgagttt 10328030  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
     |||| ||| ||||||||||||||||||||| ||||||||    
T  10328031 tgaacaattttcgagttggttcggttcattgtcagcccta 10328070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 134
Target Start/End: Complemental strand, 20190701 - 20190591
Alignment:
Q  23 cgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttc 122  Q
    ||||||||||||| ||||||||||| | |||||||||||||||||||||||| | || | |||| ||||||||| || |||||| | || ||||||||||    
T  20190701 cgaacttaattttgagctcaagttcggctcatttggttcatgaaccaagttcgatgaatcaattatcgaatcgaattacgaact-taatagagttggttc 20190603  T
Q  123 ggttcattgcca 134  Q
    ||||||||||||    
T  20190602 ggttcattgcca 20190591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 2676038 - 2676156
Alignment:
Q  22 acgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggtt 121  Q
    ||||||||||||||||||||||||||   |||||||||||||||||| ||||| |||| | |||||||| ||||| || |||||| | ||||| ||||||    
T  2676038 acgaacttaattttcagctcaagttcgactcatttggttcatgaacctagttcgacgaatcaattgtcggatcgaattacgaactttaatcgaattggtt 2676137  T
Q  122 cggttcattgccagcccta 140  Q
     |||||||| ||| |||||    
T  2676138 tggttcattaccaacccta 2676156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 26299858 - 26299984
Alignment:
Q  11 tcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatta 110  Q
    ||||||||||||||| ||||||||| | ||||||||    ||||| ||||||||||  ||||||||||| | |||| ||||||||| | ||| ||||||     
T  26299858 tcatttatttaacgagcttaattttaaactcaagtttgactcattaggttcatgaatgaagttcaacgaatcaattatcgaatcgaatctcgcactattt 26299957  T
Q  111 tcgagttggttcggttcattgccagcc 137  Q
    |||||||||||||||||||| ||||||    
T  26299958 tcgagttggttcggttcatttccagcc 26299984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 34724884 - 34724754
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 109  Q
    |||||||||||||||| ||||||||| | |||||||||   ||||| |||||||||| |||||||||||| | |||| || |||||| | ||  ||||||    
T  34724884 ctcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcaaatcgaatctcacactatt 34724785  T
Q  110 atcgagttggttcggttcattgccagcccta 140  Q
     || |||||||||||||||||||| ||||||    
T  34724784 ttcaagttggttcggttcattgccggcccta 34724754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 34857349 - 34857487
Alignment:
Q  2 aagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttc 101  Q
    ||||||| |||||||||||||||| ||||||||| | |||||||||   ||||| | |||||||| |||||||||||| | |||| | |||| || | ||    
T  34857349 aagtttaactcatttatttaacgagcttaattttaaactcaagttcgactcattagattcatgaatcaagttcaacgaatcaattattgaattgaatctc 34857448  T
Q  102 gaactattatcgagttggttcggttcattgccagcccta 140  Q
      |||||| |||||||||||||||||||||||| |||||    
T  34857449 acactattttcgagttggttcggttcattgccaacccta 34857487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 19716194 - 19716318
Alignment:
Q  11 tcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatta 110  Q
    ||||||||||||||| ||||||||| | || ||||||   ||||| |||||||||| |||||||||||| | |||| |||||||     ||| ||||||     
T  19716194 tcatttatttaacgagcttaattttaaacttaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcgaatc-----tcgcactattt 19716288  T
Q  111 tcgagttggttcggttcattgccagcccta 140  Q
    ||||||||||||||||||||||||||||||    
T  19716289 tcgagttggttcggttcattgccagcccta 19716318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 54 - 140
Target Start/End: Complemental strand, 5382911 - 5382825
Alignment:
Q  54 tttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggttcattgccagcccta 140  Q
    ||||||||||||| |||||||||||| ||||||  |||||||||| ||||||| || || ||||||||| |||||||| ||||||||    
T  5382911 tttggttcatgaatcaagttcaacgaattaattaccgaatcgagtctcgaactcttttcaagttggttcagttcattgtcagcccta 5382825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 24536021 - 24536137
Alignment:
Q  14 tttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcg 113  Q
    |||||||||||||||||||||| ||||||| || || ||||||| |||||||||||  |||||| | |||||| || |||  ||| | |||||||| ||     
T  24536021 tttatttaacgaacttaattttgagctcaaatttagctcatttgattcatgaaccagattcaacaaattaattatcaaattaagtcttgaactattttca 24536120  T
Q  114 agttggttcggttcatt 130  Q
    ||||||||| |||||||    
T  24536121 agttggttcagttcatt 24536137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 11136145 - 11136041
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||||||| |||||||||||||| || ||||||||||| | || |||||||| |||||||||||||||||  |||||  ||| |||||||     
T  11136145 caagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttc-tgaaccaagttcaacgaactaattaccgagtcgagttc 11136047  T
Q  101 cgaact 106  Q
    ||||||    
T  11136046 cgaact 11136041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 140
Target Start/End: Original strand, 28431106 - 28431194
Alignment:
Q  51 tcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||| |||||||||||||||||||| | | |||| |||||||| || ||||||||||  |||||||||| |||||| |||||||||||    
T  28431106 tcatttagttcatgaaccaagttcaacaattcaattatcgaatcgtgtatcgaactatttacgagttggtttggttca-tgccagcccta 28431194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 126
Target Start/End: Original strand, 3457836 - 3457956
Alignment:
Q  10 ctcatttatttaacgaacttaattttcag----ctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaac 105  Q
    |||||||||||||||||||||||||| |     |||||||||  ||||||||||||| ||| | ||||||||||  |||||  | |||||| | || |||    
T  3457836 ctcatttatttaacgaacttaatttttatttaactcaagttcgattcatttggttcaagaatcgagttcaacgaactaattaccaaatcgaatctcaaac 3457935  T
Q  106 tattatcgagttggttcggtt 126  Q
    |||| ||||||||||||||||    
T  3457936 tattttcgagttggttcggtt 3457956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 17168584 - 17168447
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttc--agctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagt 98  Q
    |||||| | ||| ||||| ||||||| ||||||||   |||| |||||| | ||||||||||  ||||||||||||||| | |||| | ||||||| |||    
T  17168584 caagttcaactcgtttatataacgaagttaattttttgagcttaagttcggctcatttggtttgtgaaccaagttcaacaaattaaatatcgaatctagt 17168485  T
Q  99 ttcgaactattatcgagttggttcggttcattgccagc 136  Q
     || ||||||| |||||||  |||||||||||| ||||    
T  17168484 ctcaaactattttcgagttacttcggttcattgtcagc 17168447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 128
Target Start/End: Complemental strand, 30661037 - 30660919
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 109  Q
    ||||| || ||||| ||||||||||||| || || ||||| |||||| |||||||||| ||||||||  | | |||| |||||||||||||  |||||      
T  30661037 ctcatataattaacaaacttaattttcaacttaaattcagctcatttagttcatgaactaagttcaataaatcaattatcgaatcgagttttaaactaaa 30660938  T
Q  110 atcgagttggttcggttca 128  Q
     ||||||||||||| ||||    
T  30660937 ttcgagttggttcgattca 30660919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 1225362 - 1225447
Alignment:
Q  11 tcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcga 96  Q
    |||||||||| |||| ||||||||||| |||||||||   ||||||||||||| ||| |||||||||||   |||| |||||||||    
T  1225362 tcatttatttgacgagcttaattttcaactcaagttcgactcatttggttcataaactaagttcaacgaaacaattatcgaatcga 1225447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 24202721 - 24202830
Alignment:
Q  19 ttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttg 118  Q
    ||||||| ||||||||||| |||||||||  ||||||| |||||| ||| ||||  ||| |||| |||  |||||| |||||||||||||| |  |||||    
T  24202721 ttaacgagcttaattttcaactcaagttcgattcatttagttcatcaacaaagtctaacaagttgattaccgaatcaagtttcgaactatttttaagttg 24202820  T
Q  119 gttcggttca 128  Q
    ||| ||||||    
T  24202821 gtttggttca 24202830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 140
Target Start/End: Original strand, 28247473 - 28247550
Alignment:
Q  63 tgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggttcattgccagcccta 140  Q
    ||||||||||||||||| | |||| || |||| | | |||||||||| |||| |||||||||||||||| ||||||||    
T  28247473 tgaaccaagttcaacgaatcaattatcaaatcaaatatcgaactattttcgaattggttcggttcattgtcagcccta 28247550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 1091125 - 1091263
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | ||||||||||||| ||||||| |||| | |||||||||    ||||| |||  ||||| ||||||||||| || ||| ||||||||||| |    
T  1091125 caagttcaactcatttatttaatgaacttatttttaa-ctcaagttcgacccatttagtttgtgaactaagttcaacgaattcattatcgaatcgagtct 1091223  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
     ||||| || |  |||||||||||||||| | ||||||||    
T  1091224 tgaactttttttaagttggttcggttcatcgtcagcccta 1091263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 32157076 - 32156946
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| ||||||||||||||||||| ||||||         ||||| ||||||| ||||||||| |    ||||||| | |||| ||     
T  32157076 caagttcagctcatttaattaacgaacttaattttcaactcaag---------tttggctcatgaaacaagttcaatggaccaattgtcaagtcgaatta 32156986  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    ||||||||  |||| ||||||||||||||||| |||||||    
T  32156985 cgaactatattcgaattggttcggttcattgcgagcccta 32156946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 34723792 - 34723714
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacga 79  Q
    |||||| | |||||||||||||||| ||||||||| | ||||| |||   ||||| |||||||||| ||||||||||||    
T  34723792 caagttcaactcatttatttaacgagcttaattttaaactcaaattcgactcattaggttcatgaatcaagttcaacga 34723714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 36523752 - 36523895
Alignment:
Q  1 caagtttagctcatttatttaac----gaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcga 96  Q
    |||||| ||||||||||||||||     ||||||||||| |  ||||||||   |||||||||||||||||||||||||| || |  ||| ||||||| |    
T  36523752 caagttcagctcatttatttaacaaattaacttaatttttaaatcaagttcgactcatttggttcatgaaccaagttcaatgaatctattatcgaatcaa 36523851  T
Q  97 gtttcgaactattatcgagttggttcggttcattgccagcccta 140  Q
    || ||| ||| |  |||||||  |||||||||||| || |||||    
T  36523852 gtctcggactttattcgagttaattcggttcattgtcatcccta 36523895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 140
Target Start/End: Original strand, 43386761 - 43386858
Alignment:
Q  45 ttcagttcatttggttcatgaaccaa--gttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggttcattgccagcccta 140  Q
    ||||| ||||| ||||||||||||||  ||||||||  |||||||||||||||| |||| ||||||  || ||||| || | ||||||| ||||||||    
T  43386761 ttcagctcattaggttcatgaaccaattgttcaacggattaattgtcgaatcgaatttcaaactatactcaagttgatttgattcattgtcagcccta 43386858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 39409209 - 39409266
Alignment:
Q  83 aattgtcgaatcgagtttcgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||| ||||||||| | ||| |||||| |||||||||||||||||||| |||||||||    
T  39409209 aattatcgaatcgaatctcgcactattttcgagttggttcggttcattaccagcccta 39409266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 5028905 - 5028980
Alignment:
Q  13 atttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgt 88  Q
    ||||| |||| |||||||||||||||||||| || |  |||||||||| |||||  |||||||| |||||| ||||    
T  5028905 atttaattaatgaacttaattttcagctcaaatttatctcatttggtttatgaatgaagttcaatgagttagttgt 5028980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 32670374 - 32670427
Alignment:
Q  65 aaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttg 118  Q
    ||||||||||||| |||||||| ||||||| |  ||||||||||| ||||||||    
T  32670374 aaccaagttcaacaagttaattatcgaatcaaaattcgaactattgtcgagttg 32670427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 39409141 - 39409206
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaa 66  Q
    |||||| | |||||||||||||||| ||||||||| | |||||||||   ||||| ||||||||||    
T  39409141 caagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaa 39409206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 107; Significance: 1e-53; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 44596527 - 44596657
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 109  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||    
T  44596527 ctcatttatttaacgaacttaattttcagttcaagttcagctcatttggttcatgaaccaaattcaacgagttaattgtcgaatcgagttccaaactatt 44596626  T
Q  110 atcgagttggttcggttcattgccagcccta 140  Q
     ||||||||||||||||||||||||||||||    
T  44596627 gtcgagttggttcggttcattgccagcccta 44596657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 15306502 - 15306633
Alignment:
Q  9 gctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactat 108  Q
    |||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||| || |||||| |||||||||||| ||||||||    
T  15306502 gctcatttatttaatgaacttaattttccgctcaagttcagctcatttggttcatgaaccaagttcaatgaattaattatcgaatcgagttccgaactat 15306601  T
Q  109 tatcgagttggttcggttcattgccagcccta 140  Q
    | || |||||||||||||||||||||||||||    
T  15306602 tgtcaagttggttcggttcattgccagcccta 15306633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 23915736 - 23915605
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | ||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  23915736 caagttcaactcatttatttaatgaacttaattttcagctaaagttcagctcatttggttcatgaaccaagttcaacgagataattgttgaatcgagttt 23915637  T
Q  101 cgaactattatcgagttggttcggttcattgc 132  Q
    |||||| || ||||||||||||| ||||||||    
T  23915636 cgaacttttgtcgagttggttcgattcattgc 23915605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 35810727 - 35810858
Alignment:
Q  9 gctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactat 108  Q
    ||||| |||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| | |||||||||||||| || |||||| |    
T  35810727 gctcaattatttgacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaacgaatcaattgtcgaatcgaattacgaacttt 35810826  T
Q  109 tatcgagttggttcggttcattgccagcccta 140  Q
     |||||||||||||||||||||||||||||||    
T  35810827 aatcgagttggttcggttcattgccagcccta 35810858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 45581138 - 45581008
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 109  Q
    |||||||| |||| ||||||||||||| |||||||||||  |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  45581138 ctcatttagttaatgaacttaattttccgctcaagttcaactcatttggttcatgaaccaagttcaacgagataattatcgaatcgagtttcgaactatt 45581039  T
Q  110 atcgagttggttcggttcattgccagcccta 140  Q
     || |||||||||||||||||| ||||||||    
T  45581038 ttcaagttggttcggttcattgtcagcccta 45581008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 31869603 - 31869734
Alignment:
Q  9 gctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactat 108  Q
    |||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||    
T  31869603 gctcatttatttaacgaacttaattttcagcttaagttcggctcatttggttcatgaaccaagttcaacgatttaattgtcgaatcaagttccgaactat 31869702  T
Q  109 tatcgagttggttcggttcattgccagcccta 140  Q
    | |||| || ||||||||||||| | ||||||    
T  31869703 tgtcgaattagttcggttcattgtcggcccta 31869734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 28006360 - 28006490
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 109  Q
    |||||||||||||||| ||||||||||| |||||||||   ||||||||||||||||||||||||||||||| |||| ||||||||| | ||||||||||    
T  28006360 ctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgagtcaattatcgaatcgaatctcgaactatt 28006459  T
Q  110 atcgagttggttcggttcattgccagcccta 140  Q
     ||||||||||||||||||||||| ||||||    
T  28006460 ttcgagttggttcggttcattgccggcccta 28006490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 31 - 140
Target Start/End: Complemental strand, 12224684 - 12224575
Alignment:
Q  31 attttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggttcatt 130  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  12224684 attttcagctcaagttcggctcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgaattccgaactattgtcgagttggttcggttcatt 12224585  T
Q  131 gccagcccta 140  Q
    | ||||||||    
T  12224584 gtcagcccta 12224575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 50447342 - 50447482
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||||||||||||||||||||||||| || |||||||| | ||||||||||||| ||||||||| ||||| |||||| ||||||||||| |    
T  50447342 caagttcaactcatttatttaacgaacttaattttaagttcaagttcggctcatttggttcataaaccaagtttaacgaattaattatcgaatcgagtct 50447441  T
Q  101 cgaactattatcgagttggttcggttcattgccagccctat 141  Q
    ||||||||| ||||||||||| ||||||||| |||||||||    
T  50447442 cgaactattttcgagttggtttggttcattgtcagccctat 50447482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 24469956 - 24469817
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| ||| || || ||||||||||||||||||||||  |||| | |||| |||| | |    
T  24469956 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 24469857  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  24469856 cgaactataatcgagttggttcggttcattgccagcccta 24469817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 10 - 141
Target Start/End: Original strand, 24575919 - 24576050
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 109  Q
    |||||||||||||| | ||||||||||| |||||||||  |||||||||||||||||||||||||||||||| |||| ||||||| | | ||||||||||    
T  24575919 ctcatttatttaacaagcttaattttcaactcaagttcgtttcatttggttcatgaaccaagttcaacgagtcaattatcgaatcaaatctcgaactatt 24576018  T
Q  110 atcgagttggttcggttcattgccagccctat 141  Q
     ||||||||||||||||||||| |||||||||    
T  24576019 ttcgagttggttcggttcattgtcagccctat 24576050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 32179859 - 32179998
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| ||| ||||| |||| |||||||||||||||||  |||| | |||| |||| | |    
T  32179859 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcattaggtttatgaaccaagttcaacggattaaatatcgagtcgaatgt 32179958  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  32179959 cgaactataatcgagttggttcggttcattgccagcccta 32179998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 39802898 - 39802767
Alignment:
Q  9 gctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactat 108  Q
    ||||||||||||||||||||||||||||| |||||||||   ||||||||||||||||||| ||||||||| |||| || |||| ||||| |||||||||    
T  39802898 gctcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccatgttcaacgaattaactgccgaaccgagtctcgaactat 39802799  T
Q  109 tatcgagttggttcggttcattgccagcccta 140  Q
    | ||||||||||||| ||||||||||||||||    
T  39802798 tttcgagttggttcgattcattgccagcccta 39802767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 25125024 - 25124883
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||| ||| || ||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||| | |||| || |||||| ||     
T  25125024 caagttcagctcaattagttcacgaaattaattttcagctcaagttcggctcatttggttcatgaaccaagttcaacgaatcaattatcaaatcgaatta 25124925  T
Q  101 cgaactattatcgagttggttcggttcattgccagccctatc 142  Q
    |||||| | |||||||||||||||||||||||||||||||||    
T  25124924 cgaactttaatcgagttggttcggttcattgccagccctatc 25124883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 29677658 - 29677519
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| ||||||||||||||| || ||||||||||| |||||||||   ||||||||||| |||||||||||||||||   |||| || |||||||| |    
T  29677658 caagttcagctcatttatttaaagagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgaaccaattatcaaatcgagtat 29677559  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  29677558 cgaactattttcgagttggttcggttcattgccagcccta 29677519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 36419102 - 36419241
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| |||||||||||||||||| |||||||| ||| ||||| |||||||||||||||||| |||  |||| | |||| |||| | |    
T  36419102 caagttcagctcatttaattaacgaacttaattttcggctcaagtccagctcattaggttcatgaaccaagttcgacggattaaatatcgagtcgaatgt 36419201  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  36419202 cgaactataatcgagttggttcggttcattgccagcccta 36419241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 47603001 - 47602862
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| ||| || || ||||||||||||||||||||||  |||| | |||| |||| | |    
T  47603001 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 47602902  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||||| |||||||||||||||||||||| ||||||||    
T  47602901 cgaactataatcgagttggttcggttcattgtcagcccta 47602862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 7702837 - 7702975
Alignment:
Q  2 aagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttc 101  Q
    ||||| |||||||||| ||||||||||||||||||||||||||| ||| || || | ||||||||||||||||||||  |||| | |||| |||| | ||    
T  7702837 aagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttagcttcatgaaccaagttcaacggattaaatatcgagtcgaatgtc 7702936  T
Q  102 gaactattatcgagttggttcggttcattgccagcccta 140  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  7702937 gaactataatcgagttggttcggttcattgccagcccta 7702975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 3577671 - 3577807
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttc-agttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtt 99  Q
    |||||| ||||||||||||||||||| | | |||||||||||||||  | |||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  3577671 caagttcagctcatttatttaacgaattaatttttcagctcaagttttaattcatttgattcatgaaccaagttcaacgagttaactgtcgaatcgagtt 3577770  T
Q  100 tcgaactattatcgagttggttcggttcattgccagc 136  Q
     | ||||||| ||||||| ||||||||||||| ||||    
T  3577771 ccaaactattgtcgagttagttcggttcattgtcagc 3577807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 14101871 - 14102003
Alignment:
Q  9 gctcatttatttaacgaacttaatttt-cagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaacta 107  Q
    |||| ||||||||||||| |||||||| |||||||| ||||| ||||||||||||||||| |||||||| ||| ||||||||||||||||||| ||||||    
T  14101871 gctcgtttatttaacgaatttaatttttcagctcaaattcagctcatttggttcatgaactaagttcaatgagataattgtcgaatcgagtttggaacta 14101970  T
Q  108 ttatcgagttggttcggttcattgccagcccta 140  Q
    ||||| ||||||||||| |||||| | ||||||    
T  14101971 ttatcaagttggttcggatcattgtcggcccta 14102003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 20 - 140
Target Start/End: Complemental strand, 21680776 - 21680656
Alignment:
Q  20 taacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttgg 119  Q
    |||||||||||||||| ||||||||||| | ||||||  ||||| |||||||||||||||| ||||| |||||||||||||||||||||| ||||| |||    
T  21680776 taacgaacttaatttttagctcaagttcggctcatttcattcataaaccaagttcaacgagataattatcgaatcgagtttcgaactattttcgagctgg 21680677  T
Q  120 ttcggttcattgccagcccta 140  Q
    ||||||||||||||| |||||    
T  21680676 ttcggttcattgccaacccta 21680656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 130
Target Start/End: Complemental strand, 5204599 - 5204479
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 109  Q
    |||||||||||||||||||||||||||| |||||||||   |||||||||||| |||||||||||||||||| |||| ||||||||| | || |||||||    
T  5204599 ctcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcacgaaccaagttcaacgagtcaattatcgaatcgaatctcaaactatt 5204500  T
Q  110 atcgagttggttcggttcatt 130  Q
     ||||||||||||| ||||||    
T  5204499 ttcgagttggttcgattcatt 5204479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 45653560 - 45653441
Alignment:
Q  11 tcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatta 110  Q
    |||||||  |||||||||||| ||| ||||||||||| | |||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||     
T  45653560 tcatttagctaacgaacttaacttttagctcaagttcggctcatttggttcatgaaccaagttcaacgaaataattgtcgaatcgagttttgaactattt 45653461  T
Q  111 tcgagttggttcggttcattg 131  Q
    ||||||||| |||||||||||    
T  45653460 tcgagttgg-tcggttcattg 45653441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 22 - 141
Target Start/End: Complemental strand, 14578703 - 14578584
Alignment:
Q  22 acgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggtt 121  Q
    |||||||||||||||||||| ||||| | ||||||||||||||||||||||||||| | | ||||||| |||||| || |||||| | ||||||||||||    
T  14578703 acgaacttaattttcagctccagttcggctcatttggttcatgaaccaagttcaacaaatcaattgtctaatcgaattacgaactctaatcgagttggtt 14578604  T
Q  122 cggttcattgccagccctat 141  Q
    |||||||||| |||||||||    
T  14578603 cggttcattgtcagccctat 14578584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 42916253 - 42916114
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||| ||| ||| ||||||||||||||||||||||||| | |||||||||||||||||||||||| |||| | |||| ||||||||| ||     
T  42916253 caagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaatcgaatta 42916154  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||  | ||||| ||||||||||||||||||| |||||    
T  42916153 cgaacactaatcgaattggttcggttcattgccaccccta 42916114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 42937075 - 42937214
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||| ||| || |||||||||||||| ||||||||||| | ||||||| |||||||||||||||| |||| | |||||| ||||||| ||     
T  42937075 caagttcagctcaattagttgacgaacttaattttaagctcaagttcggctcatttgattcatgaaccaagttcgacgaatcaattgttgaatcgaatta 42937174  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||| | ||||||||||||| |||||||||||||||||    
T  42937175 cgaactctaatcgagttggttcagttcattgccagcccta 42937214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 9 - 131
Target Start/End: Original strand, 31816577 - 31816699
Alignment:
Q  9 gctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactat 108  Q
    |||||||||||| |||| ||||||||||  || |||||||  ||||||||||||||||||||||||||||| | ||||  ||||| ||||||||||||||    
T  31816577 gctcatttatttgacgagcttaattttcgactgaagttcaactcatttggttcatgaaccaagttcaacgaatcaattaccgaattgagtttcgaactat 31816676  T
Q  109 tatcgagttggttcggttcattg 131  Q
    | |||||||||||||||||||||    
T  31816677 tttcgagttggttcggttcattg 31816699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 7016196 - 7016075
Alignment:
Q  19 ttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttg 118  Q
    ||||| |||||| |||| ||||||||||||| ||||||||||||||||||||||||||| | | |||||||||||||||| ||||| | |  ||||||||    
T  7016196 ttaacaaacttagttttgagctcaagttcagctcatttggttcatgaaccaagttcaacaaatcaattgtcgaatcgagtctcgaattttgttcgagttg 7016097  T
Q  119 gttcggttcattgccagcccta 140  Q
    ||||||||||||| ||||||||    
T  7016096 gttcggttcattgtcagcccta 7016075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 36119073 - 36119211
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| ||||| |||| ||||| ||||| ||||  | ||||||||||||||||||||||||| |||||||||| |||||  |||||||||||||| |||    
T  36119073 caagttcagctcgtttagttaacaaacttcatttgaa-ctcaagttcagttcatttggttcataaaccaagttcgacgagaaaattgtcgaatcgaattt 36119171  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    ||||||||| |  |||||||||||||||||| ||||||||    
T  36119172 cgaactattttttagttggttcggttcattgtcagcccta 36119211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 37441325 - 37441186
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| ||| || || ||||||||||||||||||||||  |||  | |||| | || | |    
T  37441325 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagttgaatgt 37441226  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||||| ||| ||||| |||||||||||||||||||||    
T  37441225 cgaactataatctagttgattcggttcattgccagcccta 37441186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 46265083 - 46264944
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||| ||| ||| ||||||||||||||||||||||||| | |||||| ||||||||||||||||| |||| | |||| ||||||||| ||     
T  46265083 caagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttagttcatgaaccaagttcgacgaatcaattatcgaatcgaatta 46264984  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||  | ||||| ||||||||||||||||||| |||||    
T  46264983 cgaacactaatcgaattggttcggttcattgccaccccta 46264944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 7596394 - 7596524
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||| ||| ||| ||||||||||||||||||||||||| | ||||||||||||| |||||||||| |||| | |||| ||||||| | ||     
T  7596394 caagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttggttcataaaccaagttcgacgaatcaattatcgaatcaaatta 7596493  T
Q  101 cgaactattatcgagttggttcggttcattg 131  Q
    |||||| | ||||||||||||||||||||||    
T  7596494 cgaactctaatcgagttggttcggttcattg 7596524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 42 - 140
Target Start/End: Original strand, 7841665 - 7841762
Alignment:
Q  42 aagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||| |||| ||||||||||||||||||||| ||||||||    
T  7841665 aagttcggttcatttggttcatgaaccaagttcaacgaattaattatcgaatcgagtctcgaa-tattttcgagttggttcggttcattgacagcccta 7841762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 7995972 - 7996114
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||||||||||| ||||||||| | || ||||||   ||||| |||| |||||||||||||||||| | |||| ||||||||| | |    
T  7995972 caagttgagctcatttatttaacgagcttaattttaaacttaagttcgactcattaggtttatgaaccaagttcaacgaatcaattatcgaatcgaatct 7996071  T
Q  101 cgaactattatcgagttggttcggttcattgccagccctatcc 143  Q
    ||||||||| || |||||||||||||||||| || ||||||||    
T  7996072 cgaactattttcaagttggttcggttcattgtcaaccctatcc 7996114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 15257301 - 15257171
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 109  Q
    |||||||||||||||| ||||||||||| |||||||||   |||||||||||||||||||||| ||| ||   |||| ||||||||||| || |||||||    
T  15257301 ctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcgagtatcaaactatt 15257202  T
Q  110 atcgagttggttcggttcattgccagcccta 140  Q
     | ||||||||||||||||||| ||||||||    
T  15257201 tttgagttggttcggttcattgtcagcccta 15257171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 40159769 - 40159636
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||||||||||||||||||||||||||| |||||||||   ||||||| |||||||||||||| ||| ||   |||| ||||||||| | |    
T  40159769 caagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttgattcatgaaccaagtccaatgaaccaattatcgaatcgaatat 40159670  T
Q  101 cgaactattatcgagttggttcggttcattgcca 134  Q
    | ||||||| ||||||||||||||||||||||||    
T  40159669 caaactattttcgagttggttcggttcattgcca 40159636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 15014339 - 15014455
Alignment:
Q  24 gaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcg 123  Q
    |||||||||||||| ||||||||| | |||||||||||||||| ||||||| |||| | |||| ||||||||| || |||||| | ||||||||||||||    
T  15014339 gaacttaattttcaactcaagttcggctcatttggttcatgaatcaagttcgacgaatcaattatcgaatcgaattacgaactctaatcgagttggttcg 15014438  T
Q  124 gttcattgccagcccta 140  Q
    ||||||||||| |||||    
T  15014439 gttcattgccaacccta 15014455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 140
Target Start/End: Original strand, 30251437 - 30251565
Alignment:
Q  13 atttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactat-tat 111  Q
    ||||| ||||||||||||||||| |||||||||||| ||||||| |||||||||||||  |||||||||||||| ||||||| ||||| ||||||| | |    
T  30251437 atttagttaacgaacttaatttttagctcaagttcaattcatttagttcatgaaccaaactcaacgagttaattatcgaatcaagttttgaactatgttt 30251536  T
Q  112 cgagttggttcggttcattgccagcccta 140  Q
    ||| |||||| ||||||||| || |||||    
T  30251537 cgaattggtttggttcattgtcaacccta 30251565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 140
Target Start/End: Original strand, 6413272 - 6413379
Alignment:
Q  33 tttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggttcattgc 132  Q
    ||||| |||||||||  |||||||||||||||||||| ||||||||| | |||| || |||||| | |||||||||| ||||||||||||| ||||||||    
T  6413272 tttcaactcaagttcgattcatttggttcatgaaccaggttcaacgaatcaattatcaaatcgaatctcgaactattttcgagttggttcgattcattgc 6413371  T
Q  133 cagcccta 140  Q
    ||||||||    
T  6413372 cagcccta 6413379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 20904036 - 20903949
Alignment:
Q  53 atttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||| | ||||||| |||||||| ||||||||||| |||||||||    
T  20904036 atttggttcatgaaccaagttcaacgagttaattgttgaattgagttccaaactattgtcgagttgattcggttcatttccagcccta 20903949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 23916811 - 23916950
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||| ||| || |||||||||||||||||||||||||  | |||||||||| ||||||||||||  | || | |||| ||||||||| ||     
T  23916811 caagttcagctcaattagttgacgaacttaattttcagctcaagttaggctcatttggttaatgaaccaagtttgatgaatcaattatcgaatcgaatta 23916910  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||| | |||||||||||| ||||||||| ||||||||    
T  23916911 cgaactttaatcgagttggtttggttcattgtcagcccta 23916950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 27076654 - 27076515
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | ||| |||||||||||||||||| ||| ||||||||||| | |||||| ||||||| |||||||||||||| |||||| ||||||| ||| |    
T  27076654 caagttcaactcgtttatttaacgaacttaactttgagctcaagttcggctcatttagttcatggaccaagttcaacgaattaattatcgaatcaagtct 27076555  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
      ||||||| || |||||||||  ||||||| ||||||||    
T  27076554 taaactattttcaagttggttcaattcattgtcagcccta 27076515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 38061317 - 38061178
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||||||||||||||| ||||||||| | || ||||||   ||||| ||||||| || |||||||||||| | |||| || |||||| | |    
T  38061317 caagttcaactcatttatttaacgagcttaattttaaacttaagttcgactcattaggttcataaatcaagttcaacgaatcaattatcaaatcgaatct 38061218  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    || |||||| ||||||||||||||||||||||||||||||    
T  38061217 cgcactattttcgagttggttcggttcattgccagcccta 38061178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 48575219 - 48575080
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | ||||||||||| |||||||||||||| |  ||||||||  ||| |||||||||||||||||||||||||| ||||||  ||||| |||| |    
T  48575219 caagttcaactcatttatttgacgaacttaattttaaattcaagttcgattcgtttggttcatgaaccaagttcaacgaattaattaccgaattgagtct 48575120  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |  |||||| ||||||| ||||||||| ||||| ||||||    
T  48575119 catactattttcgagttagttcggttctttgccggcccta 48575080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 144
Target Start/End: Original strand, 47983265 - 47983399
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 109  Q
    ||||||||||||||||  |||  ||| | |||||||||   ||||||||||| ||||||||||||||| | | |||| ||||||||| | ||||||||||    
T  47983265 ctcatttatttaacgagtttagattttaactcaagttcgactcatttggttcgtgaaccaagttcaacaaatcaattatcgaatcgaatctcgaactatt 47983364  T
Q  110 atcgagttggttcggttcattgccagccctatccg 144  Q
     ||||||||||||||||||||| || |||||||||    
T  47983365 ttcgagttggttcggttcattgtcaaccctatccg 47983399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 51432342 - 51432246
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgag 97  Q
    |||||| |||| |||||||||||||  ||||||||||||| || ||||  |||||||||||||||||||||| ||||||||||||||| ||||||||    
T  51432342 caagttcagctaatttatttaacgattttaattttcagcttaatttcaactcatttggttcatgaaccaagtacaacgagttaattgttgaatcgag 51432246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 7956325 - 7956464
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||||||||||||| | |||||||||||  ||||||||   | |||| ||||||||||||||| ||| ||   |||| |||||| |||| |    
T  7956325 caagttcaactcatttatttaacaagcttaattttcaattcaagttcgactaattttgttcatgaaccaagtccaatgaaccaattatcgaattgagtat 7956424  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    ||||||||| |||||||||||||||||||||||| |||||    
T  7956425 cgaactattttcgagttggttcggttcattgccaacccta 7956464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 20347674 - 20347797
Alignment:
Q  8 agctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaacta 107  Q
    |||||||||| ||||||||||||||||||| || |||||| | ||||||||| |||||| ||| |||||||| ||||||||||| || | |||  |||||    
T  20347674 agctcatttaattaacgaacttaattttcatcttaagttcggctcatttggtacatgaatcaaattcaacgaattaattgtcgagtcaaattttaaacta 20347773  T
Q  108 ttatcgagttggttcggttcattg 131  Q
    |  |||||||| ||||||||||||    
T  20347774 tattcgagttgattcggttcattg 20347797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 20349154 - 20349277
Alignment:
Q  8 agctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaacta 107  Q
    |||||||||| ||||||||||||||||||| || |||||| | |||||||||  ||||| |||||||||||| |||||| |||| || | |||  |||||    
T  20349154 agctcatttaattaacgaacttaattttcatctgaagttcggctcatttggtatatgaatcaagttcaacgaattaattatcgagtcaaattttaaacta 20349253  T
Q  108 ttatcgagttggttcggttcattg 131  Q
    |  |||||||||||||||||||||    
T  20349254 tgttcgagttggttcggttcattg 20349277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 19508538 - 19508659
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 109  Q
    |||||||| |||||||||||||| || ||||||||||| | || ||||||||||||||||||||||||||  |||||  ||| ||||||| |||||| |     
T  19508538 ctcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaacgaactaattaccgagtcgagttccgaacttta 19508637  T
Q  110 atcgagttggttcggttcattg 131  Q
     ||||||||  |||||||||||    
T  19508638 ttcgagttgtatcggttcattg 19508659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 15662971 - 15663086
Alignment:
Q  22 acgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggtt 121  Q
    |||||||||||||||||||||||||| | ||||||||| |||||||||||||| |||| | |||| | |||| || || | |||| | || |||||||||    
T  15662971 acgaacttaattttcagctcaagttcggctcatttggtacatgaaccaagttcgacgaatcaattattgaattgaattacaaactctaattgagttggtt 15663070  T
Q  122 cggttcattgccagcc 137  Q
    |||||||||| |||||    
T  15663071 cggttcattgtcagcc 15663086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 51 - 134
Target Start/End: Complemental strand, 51432227 - 51432144
Alignment:
Q  51 tcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggttcattgcca 134  Q
    ||||||||||||||||||| || ||||||||||||||| |||||||| | |||| |||| ||||||||||||||||||| ||||    
T  51432227 tcatttggttcatgaaccaggtacaacgagttaattgttgaatcgagctccgaattattgtcgagttggttcggttcatagcca 51432144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 136
Target Start/End: Original strand, 14796598 - 14796724
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 109  Q
    |||||||||||||||||||||||||  || |||||||||  | | ||||||||||||||| ||||||||| |||||| |||| || |||| |||||| |     
T  14796598 ctcatttatttaacgaacttaatttaaagttcaagttcaacttaattggttcatgaaccacgttcaacgaattaattatcgagtcaagttccgaactttg 14796697  T
Q  110 atcgagttggttcggttcattgccagc 136  Q
    |||||||| | |||||| |||| ||||    
T  14796698 atcgagttagctcggtttattgtcagc 14796724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 136
Target Start/End: Original strand, 14805472 - 14805598
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatt 109  Q
    |||||||||||||||||||||||||  || |||||||||  | | ||||||||||||||| ||||||||| |||||| |||| || |||| |||||| |     
T  14805472 ctcatttatttaacgaacttaatttaaagttcaagttcaacttaattggttcatgaaccacgttcaacgaattaattatcgagtcaagttccgaactttg 14805571  T
Q  110 atcgagttggttcggttcattgccagc 136  Q
    |||||||| | |||||| |||| ||||    
T  14805572 atcgagttagctcggtttattgtcagc 14805598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 43087605 - 43087466
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||||||| |||||||||||||| || || |||||||| | || |||||||||||||||||||||||| |  |||||  ||| |||||||     
T  43087605 caagttcaactcatttaattaacgaacttaatctttagttcaagttcggctcgtttggttcatgaaccaagttcaacaaactaattaccgagtcgagttc 43087506  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||| |  || |||||  || |||||||| ||||||||    
T  43087505 cgaactttattcaagttgtatcagttcattgtcagcccta 43087466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 120
Target Start/End: Original strand, 11991274 - 11991392
Alignment:
Q  2 aagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttc 101  Q
    ||||| || ||||||| ||||||||| |||||||||  | |||||||  | |||||||||||||||||  ||||| ||||||||||| || ||||||| |    
T  11991274 aagttcagttcatttagttaacgaacataattttcaatttaagttcatcttatttggttcatgaaccatattcaaagagttaattgttgagtcgagttcc 11991373  T
Q  102 gaactattatcgagttggt 120  Q
     ||||||  ||||||||||    
T  11991374 aaactatgttcgagttggt 11991392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 130
Target Start/End: Complemental strand, 29113640 - 29113535
Alignment:
Q  25 aacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcgg 124  Q
    |||||||||||||| |||| |||||   ||||||||||||||||||||||||||| | ||||| | ||| |||||| ||||| |  | ||||||||| ||    
T  29113640 aacttaattttcagttcaaattcagcctatttggttcatgaaccaagttcaacgaatcaattgccaaattgagttttgaactttatttgagttggtttgg 29113541  T
Q  125 ttcatt 130  Q
    ||||||    
T  29113540 ttcatt 29113535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 14770655 - 14770580
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaa 76  Q
    |||||| |||||| ||| || |||||||||||||| || |||||||| | ||||||||||||| ||||||||||||    
T  14770655 caagttcagctcaattagttcacgaacttaatttttagatcaagttcggctcatttggttcataaaccaagttcaa 14770580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 14725354 - 14725419
Alignment:
Q  43 agttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactat 108  Q
    |||||| |||||||| |||||||||||||||||||||| ||||||| ||||| ||||  |||||||    
T  14725354 agttcaattcatttgattcatgaaccaagttcaacgagataattgttgaatcaagttcggaactat 14725419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 28020598 - 28020678
Alignment:
Q  6 ttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaatt 86  Q
    |||||||||||| |||  |||||||||| |||| |||||||||  ||||||| ||||||||| ||||| ||||| ||||||    
T  28020598 ttagctcatttagttagagaacttaattatcagttcaagttcaactcatttgattcatgaactaagtttaacgaattaatt 28020678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 13645310 - 13645247
Alignment:
Q  10 ctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagtt 73  Q
    |||||||| |||||||||||||| || ||||||||||| | || |||| |||||||||||||||    
T  13645310 ctcatttacttaacgaacttaatctttagctcaagttcggctcgtttgattcatgaaccaagtt 13645247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 8828353 - 8828303
Alignment:
Q  13 atttatttaacgaacttaattttcagctcaagttcagttcatttggttcat 63  Q
    ||||| |||||  ||||||||||||||||||||||| ||||||||||||||    
T  8828353 atttagttaacagacttaattttcagctcaagttcaattcatttggttcat 8828303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 33233689 - 33233574
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | ||| |||| ||||||| ||||||||||||||||||||||  | ||||| |||||||| ||| ||   ||| ||||||||||| || | |||    
T  33233689 caagttaaactcgtttagttaacgaccttaattttcagctcaagttcaacttatttgattcatgaatcaattt---cgaattaattgtcgagtcaaattt 33233593  T
Q  101 cgaactattatcgagttgg 119  Q
     |||||||  |||||||||    
T  33233592 tgaactatgttcgagttgg 33233574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 42243195 - 42243267
Alignment:
Q  173 tgaattatgattggttgattgcttattcggaatgatctcgtgatgctccccctctaaatatatagcattgctc 245  Q
    |||||| |||||||||||||||||||| || ||||| ||| |||| ||| ||||  |||| ||||||||||||    
T  42243195 tgaattgtgattggttgattgcttatttgggatgatttcgggatgttccacctcagaatacatagcattgctc 42243267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 40002895 - 40002960
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaa 66  Q
    |||||| | |||| ||| || |||||||||||||||| ||||||||| | ||||||| ||||||||    
T  40002895 caagttcaactcaattagttgacgaacttaattttcaactcaagttcggctcatttgattcatgaa 40002960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 104; Significance: 8e-52; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 3307943 - 3308074
Alignment:
Q  9 gctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactat 108  Q
    |||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||    
T  3307943 gctcatttatttaacgaacttaattttctgctcaagttcggctcatttggttcatgaactaagttctacgagttaattgtcgaatcgagttccgaactat 3308042  T
Q  109 tatcgagttggttcggttcattgccagcccta 140  Q
    | ||||||||||||||||||||||||||||||    
T  3308043 tgtcgagttggttcggttcattgccagcccta 3308074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 8 - 140
Target Start/End: Complemental strand, 9412656 - 9412524
Alignment:
Q  8 agctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaacta 107  Q
    ||||||||||| ||||||| |||||| ||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| | | |||||    
T  9412656 agctcatttatgtaacgaatttaattctcaactcaagttcagctcatttggttcatgaaccaagttcaacgagttcattgtcgagtcgagctccaaacta 9412557  T
Q  108 ttatcgagttggttcggttcattgccagcccta 140  Q
    | |||||||||||||||||||||||||||||||    
T  9412556 taatcgagttggttcggttcattgccagcccta 9412524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 32740640 - 32740769
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||| ||| || ||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||     
T  32740640 caagttcagcttattaatctaatgaacttatttttcagttcaagttcagttcatttggttcatgaaccaaattcaatgagttaattgtcgaattgagttc 32740739  T
Q  101 cgaactattatcgagttggttcggttcatt 130  Q
    | ||||||| ||||||||||||||||||||    
T  32740740 caaactattgtcgagttggttcggttcatt 32740769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 453484 - 453623
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||||||| ||||||||||||||||||| ||||||| ||| || || ||||||||||||||||||||||  |||  | |||| |||| | |    
T  453484 caagttcaactcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgt 453583  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  453584 cgaactataatcgagttggttcggttcattgccagcccta 453623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 11161573 - 11161706
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| ||| || || ||||||||||||||||||||||  |||| | |||| |||| | |    
T  11161573 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattaaatatcgagtcgaatgt 11161672  T
Q  101 cgaactattatcgagttggttcggttcattgcca 134  Q
    |||||||| ||| |||||||| ||||||||||||    
T  11161673 cgaactataatcaagttggtttggttcattgcca 11161706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 33280116 - 33279976
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||| ||| || |||||||||||||| ||||||  ||| | |||||||||||||||||||||||| |||| | |||| ||||||| | ||     
T  33280116 caagttcagctcaattagttgacgaacttaattttaagctcatattcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaatcaaatta 33280017  T
Q  101 cgaactattatcgagttggttcggttcattgccagccctat 141  Q
    |||||| | |||||||||||||||||||||| |||||||||    
T  33280016 cgaactttaatcgagttggttcggttcattgtcagccctat 33279976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 37 - 132
Target Start/End: Original strand, 43384831 - 43384926
Alignment:
Q  37 agctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggttcattgc 132  Q
    ||||||||||||  |||||||||||||||||||| |||||||| |||||| ||||||||| | |||||||||| ||||||||||||||||||||||    
T  43384831 agctcaagttcaactcatttggttcatgaaccaacttcaacgaattaattatcgaatcgaatctcgaactattttcgagttggttcggttcattgc 43384926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 40 - 140
Target Start/End: Original strand, 39478090 - 39478190
Alignment:
Q  40 tcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggttcattgccagccct 139  Q
    |||||||||  |||||||||||||||||||||| ||| ||   |||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  39478090 tcaagttcaactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgccagccct 39478189  T
Q  140 a 140  Q
    |    
T  39478190 a 39478190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 34516139 - 34516270
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||| ||| |  |||||||||||||||||||||||||| | |||||||||| ||||| ||||||||| || | ||||||||||| || ||     
T  34516139 caagttcagctcaattaatcgacgaacttaattttcagctcaagttcggctcatttggttgatgaatcaagttcaatgaatcaattgtcgaattgaatta 34516238  T
Q  101 cgaactattatcgagttggttcggttcattgc 132  Q
    |||||| | || ||||||||||||||||||||    
T  34516239 cgaactttaattgagttggttcggttcattgc 34516270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 9135963 - 9136092
Alignment:
Q  11 tcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatta 110  Q
    ||||||| ||||| ||||||| ||||||||||||||||| | ||||| ||||| ||||||||||||||||||||||||||| |||||||   |||||||     
T  9135963 tcatttagttaacaaacttaaatttcagctcaagttcagcttatttgattcataaaccaagttcaacgagttaattgtcgagtcgagttctaaactattt 9136062  T
Q  111 tcgagttggttcggttcattgccagcccta 140  Q
    | ||||||  || |||||||  ||||||||    
T  9136063 ttgagttgtctcagttcattttcagcccta 9136092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 27189221 - 27189092
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||| ||| || ||||||||||||||||||||||||||   |||||||||||||||||||||||| |||| | |||| ||||||| | ||     
T  27189221 caagttcaactcaattagttgacgaacttaattttcagctcaagttcgactcatttggttcatgaaccaagttcgacgaatcaattatcgaatctaatta 27189122  T
Q  101 cgaactattatcgagttggttcggttcatt 130  Q
    |||||| | ||||||||| |||||||||||    
T  27189121 cgaactctaatcgagttgattcggttcatt 27189092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 23181156 - 23181254
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtt 99  Q
    |||||| |||||| ||| || ||||||||||||||||| |||||||| | |||||||||||||||||||| ||| |||| | |||||||||||||||||    
T  23181156 caagttcagctcaattagtttacgaacttaattttcagttcaagttcggctcatttggttcatgaaccaaattcgacgaatcaattgtcgaatcgagtt 23181254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 34655036 - 34655176
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||||| |||||||| ||||| |||||||| || |||||||||||   || |||||||||||||| ||||||||| |  |||||  ||| |||||||     
T  34655036 caagtttaactcatttagttaacaaacttaatctttagctcaagttcgactcgtttggttcatgaactaagttcaacaaactaattaccgagtcgagttc 34655135  T
Q  101 cgaactattatcgagttggttcggttcattgccagccctat 141  Q
    |||||| |  ||||||||  |||||||||||||||||||||    
T  34655136 cgaactttattcgagttgtatcggttcattgccagccctat 34655176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 1091728 - 1091867
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | ||||||| ||| |||||||||||||| | |||| ||||   || ||||||||||||| |||||||||||| |||||| ||||||||||| |    
T  1091728 caagttcaactcatttgtttgacgaacttaattttaaactcaggttcgactcgtttggttcatgaatcaagttcaacgaattaattatcgaatcgagtct 1091827  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    | ||||||| | ||||| |||| ||||||| |||| ||||    
T  1091828 caaactatttttgagtttgttcagttcattaccagtccta 1091867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 43967511 - 43967650
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||||||| |||||||||||||| || ||||||||||| | || ||||||||||||||||| ||||||||  |||||   || |||||||     
T  43967511 caagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaaattcaacgaactaattactgagtcgagttc 43967610  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||| |  || |||||  ||||||||||||||||||||    
T  43967611 cgaactttgttcaagttgtatcggttcattgccagcccta 43967650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 22564017 - 22564147
Alignment:
Q  11 tcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatta 110  Q
    ||||| |||| |||| ||||||||||| |||||||||  || |||||||||||||||||||||||||||   ||||  |||||| | |||| || ||||     
T  22564017 tcattcatttgacgagcttaattttcaactcaagttcgatttatttggttcatgaaccaagttcaacgaaacaattaccgaatcaaatttcaaattattt 22564116  T
Q  111 tcgagttggttcggttcattgccagccctat 141  Q
    ||||||||| ||||||| |||||||| ||||    
T  22564117 tcgagttggatcggttcgttgccagctctat 22564147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 24854608 - 24854739
Alignment:
Q  9 gctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactat 108  Q
    |||| |||| |||||||  |||||||||||||||||||||  ||||||||||||  ||||||||| ||||||||||||||||| | || |||| |||| |    
T  24854608 gctcgtttaattaacgagtttaattttcagctcaagttcaactcatttggttcacaaaccaagtttaacgagttaattgtcgagttgaatttcaaacttt 24854707  T
Q  109 tatcgagttggttcggttcattgccagcccta 140  Q
      || || || ||||||| ||||||| |||||    
T  24854708 attcaagctgtttcggtttattgccaacccta 24854739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 37 - 140
Target Start/End: Original strand, 12378389 - 12378492
Alignment:
Q  37 agctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggttcattgccagc 136  Q
    ||||||||||||  ||||||||||| ||||||||||||||||| | |||| ||||| ||| | ||| |||||| | ||||| ||||||||||||| || |    
T  12378389 agctcaagttcaactcatttggttcgtgaaccaagttcaacgaatcaattatcgaaccgaatctcggactatttttgagtttgttcggttcattgtcaac 12378488  T
Q  137 ccta 140  Q
    ||||    
T  12378489 ccta 12378492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 35058318 - 35058401
Alignment:
Q  11 tcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatc 94  Q
    ||||||| ||||| ||||| ||||||||||||||||||| ||||||| ||  |||||||| || ||||| |||||| |||||||    
T  35058318 tcatttagttaacaaacttgattttcagctcaagttcagctcatttgattgttgaaccaaattaaacgaattaattatcgaatc 35058401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 17865489 - 17865388
Alignment:
Q  39 ctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattatcgagttggttcggttcattgccagccc 138  Q
    ||||||||| | || |||||||||||||||||||| |||||  |||||  ||| ||||||| |||| | |  | ||||||  ||||||||||||||||||    
T  17865489 ctcaagttcggctcgtttggttcatgaaccaagttaaacgaactaattaccgagtcgagttccgaattttatttgagttgtctcggttcattgccagccc 17865390  T
Q  139 ta 140  Q
    ||    
T  17865389 ta 17865388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 43955939 - 43955884
Alignment:
Q  37 agctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaa 92  Q
    |||| |||||||| |||||||||||||||||||| || ||||| |||||| |||||    
T  43955939 agcttaagttcagctcatttggttcatgaaccaaattaaacgaattaattatcgaa 43955884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 10749358 - 10749312
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttc 47  Q
    |||||| |||||| ||| || ||||||||||||||||||||||||||    
T  10749358 caagttcagctcaattagttgacgaacttaattttcagctcaagttc 10749312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 11399 - 11532
Alignment:
Q  9 gctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactat 108  Q
    ||||||||||||||||||||||||||| | || |||||||  ||||||||||||||||| |||||| ||||| |||||||||||||||||| | ||||||    
T  11399 gctcatttatttaacgaacttaatttttaacttaagttcacctcatttggttcatgaactaagttcgacgaggtaattgtcgaatcgagttccaaactat 11498  T
Q  109 tatcgagttggttcggttcattgccagccctatc 142  Q
    ||||||||||||||||||||||| ||| ||||||    
T  11499 tatcgagttggttcggttcattgtcagtcctatc 11532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 21089 - 21229
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | ||||||||||||| || ||||||||||| |||||||||   || |||||||||||||||||||||||||| | |||| ||||||||||| |    
T  21089 caagttcaactcatttatttaatgagcttaattttcaactcaagttcgactc-tttggttcatgaaccaagttcaacgaatcaattatcgaatcgagtct 21187  T
Q  101 cgaactattatcgagttggttcggttcattgccagccctatc 142  Q
    ||||||||| ||||||||||||||||||||| ||||||||||    
T  21188 cgaactattttcgagttggttcggttcattgtcagccctatc 21229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 19297 - 19436
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| ||| || || |||||||||||||||||||| |  |||  | |||| |||| | |    
T  19297 caagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaaaggattagatatcgagtcgaatgt 19396  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  19397 cgaactataatcgagttggttcggttcattgccagcccta 19436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 14435 - 14566
Alignment:
Q  9 gctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactat 108  Q
    |||||||||||| |||| ||||||||||  ||||||||||  |||||||||||||||||||||||||| || | ||||  ||||||||||||||||||||    
T  14435 gctcatttatttgacgagcttaattttcgactcaagttcaaatcatttggttcatgaaccaagttcaatgaatcaattaccgaatcgagtttcgaactat 14534  T
Q  109 tatcgagttggttcggttcattgccagcccta 140  Q
    | ||| ||||||||||||||||| ||||||||    
T  14535 tttcgggttggttcggttcattgtcagcccta 14566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 7447 - 7308
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| |||||| ||| ||| ||||||||||||||||||||||||| | |||||||||||||||||||||||| |||| | |||| ||||||||| ||     
T  7447 caagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcgacgaatcaattatcgaatcgaatta 7348  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    |||||  | ||||| ||||||||||||||||||| |||||    
T  7347 cgaacactaatcgaattggttcggttcattgccaccccta 7308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 134
Target Start/End: Complemental strand, 32912 - 32791
Alignment:
Q  11 tcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactatta 110  Q
    ||||||||||||||| |||||||| || |||||||||   |||||||||   |||||||||||||||||   |||||||||||||||| ||||||||||     
T  32912 tcatttatttaacgagcttaatttacaactcaagttcgactcatttggtg--tgaaccaagttcaacgaaccaattgtcgaatcgagtatcgaactattt 32815  T
Q  111 tcgagttggttcggttcattgcca 134  Q
    ||||||||||||||||||||||||    
T  32814 tcgagttggttcggttcattgcca 32791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 140
Target Start/End: Complemental strand, 26759 - 26621
Alignment:
Q  2 aagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttc 101  Q
    ||||| |||||| ||| || ||||||||||||||||||||||||||   ||||||| ||||||||||||||||||| | | | |||||||||||| || |    
T  26759 aagttcagctcaattagttgacgaacttaattttcagctcaagttcgactcatttgattcatgaaccaagttcaacaaatcagttgtcgaatcgaattac 26660  T
Q  102 gaactattatcgagttggttcggttcattgccagcccta 140  Q
    ||||| | || ||||||||||| ||||||| ||||||||    
T  26659 gaactctaattgagttggttcgattcattgtcagcccta 26621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 8 - 134
Target Start/End: Complemental strand, 124613 - 124487
Alignment:
Q  8 agctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaacta 107  Q
    |||||||||| ||||| ||||||||  |||||||||||||   |||||||||||||||||||||||||| |    ||||||||| || | ||||||||||    
T  124613 agctcatttaattaacaaacttaataatcagctcaagttcgactcatttggttcatgaaccaagttcaatggaccaattgtcgagtcaaatttcgaacta 124514  T
Q  108 ttatcgagttggttcggttcattgcca 134  Q
    |  ||||||||||||||||||||||||    
T  124513 tattcgagttggttcggttcattgcca 124487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 9997 - 10120
Alignment:
Q  8 agctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaacta 107  Q
    |||||||||| ||||||||||||||||||| || |||||| | ||||||||| |||||| ||| |||||||| ||||||||||| || | |||  |||||    
T  9997 agctcatttaattaacgaacttaattttcatcttaagttcggctcatttggtacatgaatcaaattcaacgaattaattgtcgagtcaaattttaaacta 10096  T
Q  108 ttatcgagttggttcggttcattg 131  Q
    |  |||||||| ||||||||||||    
T  10097 tattcgagttgattcggttcattg 10120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 11477 - 11600
Alignment:
Q  8 agctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaacta 107  Q
    |||||||||| ||||||||||||||||||| || |||||| | |||||||||  ||||| |||||||||||| |||||| |||| || | |||  |||||    
T  11477 agctcatttaattaacgaacttaattttcatctgaagttcggctcatttggtatatgaatcaagttcaacgaattaattatcgagtcaaattttaaacta 11576  T
Q  108 ttatcgagttggttcggttcattg 131  Q
    |  |||||||||||||||||||||    
T  11577 tgttcgagttggttcggttcattg 11600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 906 - 778
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||||||||||||||| ||||||||||| | ||| ||||  ||||||||||||||||||||||||||            |||||||||| |    
T  906 caagttcaactcatttatttaacgagcttaattttcaacccaaattcaactcatttggttcatgaaccaagttcaa------------cgaatcgagtct 819  T
Q  101 cgaactattatcgagttggttcggttcattgccagccctat 141  Q
    | ||||||| |||| |||||||||||||||| |||||||||    
T  818 caaactattttcgaattggttcggttcattggcagccctat 778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 51441 - 51310
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||||||||||||| | ||||||||| |  ||| ||||   |||||||||||| |||| ||||||||||| ||| ||  |||| ||| | |    
T  51441 caagttcaactcatttatttaacaagcttaattttaaaatcacgttcgactcatttggttcacgaactaagttcaacgaattatttaccgaaccgaatct 51342  T
Q  101 cgaactattatcgagttggttcggttcattgc 132  Q
    ||||||||| ||||| | ||||||||||||||    
T  51341 cgaactattttcgagctagttcggttcattgc 51310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 96281 - 96420
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||||||||||||||| ||||||||| | || |||||    |||||||||||| |||  |||||||| || ||| ||  |||| ||| | |    
T  96281 caagttcaactcatttatttaacgagcttaattttgaacttaagttggactcatttggttcacgaattaagttcaatgaattatttaacgaaccgaatct 96380  T
Q  101 cgaactattatcgagttggttcggttcattgccagcccta 140  Q
    ||||||||| ||||| | ||||||||||||| ||| ||||    
T  96381 cgaactattttcgagctagttcggttcattgtcagtccta 96420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 323 - 245
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacga 79  Q
    |||||| | |||||||| ||||||||||||||| | | ||||||||| | | ||| |||||||||||||||| ||||||    
T  323 caagttcaactcatttaattaacgaacttaattcttaactcaagttcggctaattaggttcatgaaccaagtccaacga 245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 25704 - 25566
Alignment:
Q  1 caagtttagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgagttt 100  Q
    |||||| | |||||||| |||||| ||||||||||||| | |||||| | |||||||  |||| ||||||||||||||| || |||||||| | ||| |     
T  25704 caagttcatctcatttaattaacggacttaattttcagtttaagttc-gctcatttgactcataaaccaagttcaacgaatt-attgtcgagttgagctc 25607  T
Q  101 cgaactattatcgagttggttcggttcattgccagccctat 141  Q
    ||||||||  | ||||| | |||||| ||||| | ||||||    
T  25606 cgaactatatttgagttagctcggttaattgctaaccctat 25566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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