View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18997_high_21 (Length: 260)
Name: NF18997_high_21
Description: NF18997
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18997_high_21 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 41748040 - 41748299
Alignment:
| Q |
1 |
ctgaagaagctgctatggagtatgataaagccgccattgaaatacgtggtgcagacgcgcttacgaatttcattcaacccacgacaaagaaggttgttat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41748040 |
ctgaagaagctgctatggagtatgataaagccgccattgaaatacgtggtgcagacgcgcttacgaatttcattcaacccacgacaaagaaggttgttat |
41748139 |
T |
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| Q |
101 |
aaactccagcagcgatgaatgcgttgtttctgccacgtcagtacttcaatgttgtacttcttcctcagaaggaggtgaatccgtaacagtaaaagacaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41748140 |
aaactccagcagcgatgaatgcgttgtttctgccacgtcagtacttcaatgttgtacttcttcctcagaaggaggtgaatccgtaacagtaaaagacaat |
41748239 |
T |
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| Q |
201 |
gttatcgttccaatgagtactgaatctttacgtgaatgtgaaaatgaatgttcgtctgtg |
260 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41748240 |
gttatcgttccaatgagtactgaatctttacgtgaatgtgaaaatgaatgttcgtctgtg |
41748299 |
T |
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